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<h3>
Steffen Möller pushed to branch master
at <a href="https://salsa.debian.org/blends-team/med">Debian Blends Team / med</a>
</h3>
<h4>
Commits:
</h4>
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<strong><a href="https://salsa.debian.org/blends-team/med/commit/2f897ca3a3dc0582c8e660ac961540f014ac295d">2f897ca3</a></strong>
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<span>by Steffen Möller</span>
<i>at 2019-12-01T02:47:14Z</i>
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<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Update bio - added ref to BioC's GEOquery</pre>
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<h4>1 changed file:</h4>
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<li class="file-stats">
<a href="#26b0fba1305554e48a6078ef69d0cfe948ad5765">
tasks/bio
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<h4>Changes:</h4>
<li id="26b0fba1305554e48a6078ef69d0cfe948ad5765">
<a href="https://salsa.debian.org/blends-team/med/commit/2f897ca3a3dc0582c8e660ac961540f014ac295d#26b0fba1305554e48a6078ef69d0cfe948ad5765"><strong>tasks/bio</strong></a>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -967,11 +967,13 @@ Recommends: rambo-k</td>
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967
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967
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<pre style="margin: 0;"> <span id="LC967" class="line" lang="mosel"></span>
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968
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<td class="diff-line-num new_line" data-linenumber="968" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
968
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<pre style="margin: 0;"> <span id="LC968" class="line" lang="mosel"><span class="n" style="color: #333;">Recommends</span><span class="p">:</span> <span class="n" style="color: #333;">rapmap</span></span>
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969
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969
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<pre style="margin: 0;"> <span id="LC969" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="970" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="970" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
970
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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC970" class="line" lang="mosel"><span class="n" style="color: #333;">Recommends</span><span class="p">:</span> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">bioc</span><span class="p">-</span><span class="n" style="color: #333;">cummerbund</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="970" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="971" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
971
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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC971" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="970" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
970
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<td class="diff-line-num new_line" data-linenumber="972" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
972
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<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC972" class="line" lang="mosel"><span class="n" style="color: #333;">Recommends</span><span class="p">:</span> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">bioc</span><span class="p">-</span><span class="n" style="color: #333;">rtracklayer</span><span class="p">,</span> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">bioc</span><span class="p">-</span><span class="n" style="color: #333;">gviz</span><span class="p">,</span> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">bioc</span><span class="p">-</span><span class="n" style="color: #333;">biostrings</span><span class="p">,</span> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">bioc</span><span class="p">-</span><span class="n" style="color: #333;">annotate</span><span class="p">,</span> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">bioc</span><span class="p">-</span><span class="n" style="color: #333;">genefilter</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="971" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
971
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<td class="diff-line-num new_line" data-linenumber="973" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
973
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<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC973" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="972" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
972
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<td class="diff-line-num new_line" data-linenumber="974" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
974
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<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC974" class="line" lang="mosel"><span class="n" style="color: #333;">Recommends</span><span class="p">:</span> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">bioc</span><span class="p">-</span><span class="n" style="color: #333;">deseq2</span><span class="p">,</span> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">bioc</span><span class="p">-</span><span class="n" style="color: #333;">dnacopy</span><span class="p">,</span> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">bioc</span><span class="p">-</span><span class="n" style="color: #333;">geneplotter</span></span>
</pre>
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973
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<td class="diff-line-num new_line" data-linenumber="975" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
975
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<pre style="margin: 0;"> <span id="LC975" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="974" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
974
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<td class="diff-line-num new_line old" data-linenumber="976" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC974" class="line" lang="mosel"><span class="n" style="color: #333;">Recommends</span><span class="p">:</span> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">bioc</span><span class="p">-</span><span class="n" style="color: #333;"><span class="idiff left right">cummerbund</span></span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="975" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="976" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
976
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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC976" class="line" lang="mosel"><span class="n" style="color: #333;">Recommends</span><span class="p">:</span> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">bioc</span><span class="p">-</span><span class="n" style="color: #333;"><span class="idiff left right">geoquery</span></span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="975" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
975
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<td class="diff-line-num new_line" data-linenumber="977" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
977
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<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC977" class="line" lang="mosel"></span>
</pre>
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976
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<td class="diff-line-num new_line" data-linenumber="978" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
978
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<pre style="margin: 0;"> <span id="LC978" class="line" lang="mosel"><span class="n" style="color: #333;">Suggests</span><span class="p">:</span> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">bioc</span><span class="p">-</span><span class="n" style="color: #333;">tximport</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="977" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
977
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<td class="diff-line-num new_line" data-linenumber="979" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
979
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<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC979" class="line" lang="mosel"></span>
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