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<h3>
Andreas Tille pushed to branch master
at <a href="https://salsa.debian.org/blends-team/med">Debian Blends Team / med</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/blends-team/med/-/commit/8707b023dd65426dd9d17284b7a5af9786c93159">8707b023</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-05-12T09:27:55+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Base architectures on sid only to avoid noise
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/blends-team/med/-/commit/6f3899b8aaae9be5011455efad1367ec30b72557">6f3899b8</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-05-12T09:52:43+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Add release
</pre>
</li>
</ul>
<h4>2 changed files:</h4>
<ul>
<li class="file-stats">
<a href="#8a0c01883456a1514ce9078deb9a9cd201172df4">
covid-19_doc/bio_covid-19_dependencies_query
</a>
</li>
<li class="file-stats">
<a href="#6d072c2122e74d0aa0bfeb56f2e3fd56014c34b6">
covid-19_doc/bio_covid-19_dependencies_result
</a>
</li>
</ul>
<h4>Changes:</h4>
<li id="8a0c01883456a1514ce9078deb9a9cd201172df4">
<a href="https://salsa.debian.org/blends-team/med/-/compare/2e727e5a9c1fbce435e4db6bdbf3a21746d69e53...6f3899b8aaae9be5011455efad1367ec30b72557#8a0c01883456a1514ce9078deb9a9cd201172df4"><strong>covid-19_doc/bio_covid-19_dependencies_query</strong></a>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="84" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="84" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -84,7 +84,7 @@ INSERT INTO covid19_packages VALUES</td>
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84
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<td class="diff-line-num new_line" data-linenumber="84" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
84
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<pre style="margin: 0;"> <span id="LC84" class="line" lang="mosel"><span class="p">(</span><span class="s1" style="color: #d14;">'centrifuge'</span><span class="p">),</span></span>
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<td class="diff-line-num old_line" data-linenumber="85" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
85
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<td class="diff-line-num new_line" data-linenumber="85" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
85
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<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC85" class="line" lang="mosel"><span class="p">(</span><span class="s1" style="color: #d14;">'changeo'</span><span class="p">),</span></span>
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<td class="diff-line-num old_line" data-linenumber="86" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
86
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<td class="diff-line-num new_line" data-linenumber="86" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
86
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<pre style="margin: 0;"> <span id="LC86" class="line" lang="mosel"><span class="p">(</span><span class="s1" style="color: #d14;">'cutadapt'</span><span class="p">),</span></span>
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<td class="diff-line-num old old_line" data-linenumber="87" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
87
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<td class="diff-line-num new_line old" data-linenumber="87" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC87" class="line" lang="mosel"><span class="p">(</span><span class="s1" style="color: #d14;">'diamond'</span><span class="p">),</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="88" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="87" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
87
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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC87" class="line" lang="mosel"><span class="p">(</span><span class="s1" style="color: #d14;">'diamond<span class="idiff left right">-aligner</span>'</span><span class="p">),</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="88" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
88
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<td class="diff-line-num new_line" data-linenumber="88" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
88
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<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC88" class="line" lang="mosel"><span class="p">(</span><span class="s1" style="color: #d14;">'python3-deeptools'</span><span class="p">),</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="89" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
89
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<td class="diff-line-num new_line" data-linenumber="89" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
89
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<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC89" class="line" lang="mosel"><span class="p">(</span><span class="s1" style="color: #d14;">'drop-seq-tools'</span><span class="p">),</span></span>
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90
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<td class="diff-line-num new_line" data-linenumber="90" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
90
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<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC90" class="line" lang="mosel"><span class="p">(</span><span class="s1" style="color: #d14;">'fastp'</span><span class="p">),</span></span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="160" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="160" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -160,10 +160,10 @@ INSERT INTO covid19_packages VALUES</td>
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<td class="diff-line-num old_line" data-linenumber="160" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
160
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<td class="diff-line-num new_line" data-linenumber="160" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
160
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<pre style="margin: 0;"> <span id="LC160" class="line" lang="mosel"><span class="p">(</span><span class="s1" style="color: #d14;">'vg'</span><span class="p">)</span></span>
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161
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161
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<pre style="margin: 0;"> <span id="LC161" class="line" lang="mosel"><span class="p">;</span></span>
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162
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162
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<pre style="margin: 0;"> <span id="LC162" class="line" lang="mosel"></span>
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163
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<pre style="margin: 0;">-<span id="LC163" class="line" lang="mosel"><span class="n" style="color: #333;">SELECT</span> <span class="n" style="color: #333;">co</span><span class="p">.</span><span class="k" style="font-weight: 600;">package</span><span class="p">,</span> <span class="n" style="color: #333;">architectures</span><span class="p">,</span> <span class="n" style="color: #333;">s</span><span class="p">.</span><span class="n" style="color: #333;">section</span> <span class="k" style="font-weight: 600;">FROM</span> <span class="n" style="color: #333;">covid19_packages</span> <span class="n" style="color: #333;">co</span></span>
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<td class="diff-line-num new new_line" data-linenumber="163" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
163
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<pre style="margin: 0;">+<span id="LC163" class="line" lang="mosel"><span class="n" style="color: #333;">SELECT</span> <span class="n" style="color: #333;">co</span><span class="p">.</span><span class="k" style="font-weight: 600;">package</span><span class="p">,</span> <span class="n" style="color: #333;">architectures</span><span class="p">,</span> <span class="n" style="color: #333;">s</span><span class="p">.</span><span class="n" style="color: #333;">section</span><span class="p"><span class="idiff left">,</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">r</span></span><span class="p"><span class="idiff">.</span></span><span class="n" style="color: #333;"><span class="idiff right">releases</span></span> <span class="k" style="font-weight: 600;">FROM</span> <span class="n" style="color: #333;">covid19_packages</span> <span class="n" style="color: #333;">co</span></span>
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164
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<td class="diff-line-num new_line" data-linenumber="164" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
164
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<pre style="margin: 0;"> <span id="LC164" class="line" lang="mosel"> <span class="n" style="color: #333;">LEFT</span> <span class="n" style="color: #333;">JOIN</span> <span class="p">(</span></span>
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<td class="diff-line-num old_line" data-linenumber="165" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
165
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<td class="diff-line-num new_line" data-linenumber="165" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
165
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<pre style="margin: 0;"> <span id="LC165" class="line" lang="mosel"> <span class="n" style="color: #333;">SELECT</span> <span class="k" style="font-weight: 600;">package</span><span class="p">,</span> <span class="n" style="color: #333;">string_agg</span><span class="p">(</span><span class="n" style="color: #333;">architecture</span><span class="p">,</span> <span class="s1" style="color: #d14;">','</span><span class="p">)</span> <span class="k" style="font-weight: 600;">AS</span> <span class="n" style="color: #333;">architectures</span> <span class="k" style="font-weight: 600;">FROM</span> <span class="p">(</span></span>
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<td class="diff-line-num old old_line" data-linenumber="166" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
166
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<td class="diff-line-num new_line old" data-linenumber="166" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC166" class="line" lang="mosel"> <span class="n" style="color: #333;">SELECT</span> <span class="n" style="color: #333;">DISTINCT</span> <span class="k" style="font-weight: 600;">package</span><span class="p">,</span> <span class="n" style="color: #333;">architecture</span> <span class="k" style="font-weight: 600;">FROM</span> <span class="n" style="color: #333;">packages</span> <span class="n" style="color: #333;">WHERE</span></span>
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<td class="diff-line-num new new_line" data-linenumber="166" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
166
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<pre style="margin: 0;">+<span id="LC166" class="line" lang="mosel"> <span class="n" style="color: #333;">SELECT</span> <span class="n" style="color: #333;">DISTINCT</span> <span class="k" style="font-weight: 600;">package</span><span class="p">,</span> <span class="n" style="color: #333;">architecture</span> <span class="k" style="font-weight: 600;">FROM</span> <span class="n" style="color: #333;">packages</span> <span class="n" style="color: #333;">WHERE</span><span class="idiff left"> </span><span class="n" style="color: #333;"><span class="idiff">release</span></span><span class="idiff"> </span><span class="k" style="font-weight: 600;"><span class="idiff">in</span></span><span class="idiff"> </span><span class="p"><span class="idiff">(</span></span><span class="s1" style="color: #d14;"><span class="idiff">'sid'</span></span><span class="p"><span class="idiff">)</span></span><span class="idiff"> </span><span class="k" style="font-weight: 600;"><span class="idiff right">AND</span></span></span>
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167
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167
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<pre style="margin: 0;"> <span id="LC167" class="line" lang="mosel"> <span class="n" style="color: #333;">architecture</span> <span class="k" style="font-weight: 600;">IN</span> <span class="p">(</span><span class="s1" style="color: #d14;">'all'</span><span class="p">,</span> <span class="s1" style="color: #d14;">'amd64'</span><span class="p">,</span> <span class="s1" style="color: #d14;">'arm64'</span><span class="p">,</span> <span class="s1" style="color: #d14;">'ppc64el'</span> <span class="p">)</span> <span class="k" style="font-weight: 600;">AND</span></span>
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168
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168
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<pre style="margin: 0;"> <span id="LC168" class="line" lang="mosel"> <span class="k" style="font-weight: 600;">package</span> <span class="k" style="font-weight: 600;">IN</span> <span class="p">(</span><span class="n" style="color: #333;">SELECT</span> <span class="p">*</span> <span class="k" style="font-weight: 600;">FROM</span> <span class="n" style="color: #333;">covid19_packages</span><span class="p">)</span></span>
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<td class="diff-line-num old_line" data-linenumber="169" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
169
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169
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<pre style="margin: 0;"> <span id="LC169" class="line" lang="mosel"> <span class="n" style="color: #333;">ORDER</span> <span class="n" style="color: #333;">BY</span> <span class="k" style="font-weight: 600;">package</span><span class="p">,</span> <span class="n" style="color: #333;">architecture</span></span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="173" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="173" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -173,6 +173,15 @@ SELECT co.package, architectures, s.section FROM covid19_packages co</td>
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173
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<td class="diff-line-num new_line" data-linenumber="173" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
173
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<pre style="margin: 0;"> <span id="LC173" class="line" lang="mosel"> <span class="n" style="color: #333;">SELECT</span> <span class="n" style="color: #333;">DISTINCT</span> <span class="k" style="font-weight: 600;">package</span><span class="p">,</span> <span class="k" style="font-weight: 600;">CASE</span> <span class="n" style="color: #333;">WHEN</span> <span class="n" style="color: #333;">substring</span><span class="p">(</span><span class="n" style="color: #333;">section</span> <span class="k" style="font-weight: 600;">from</span> <span class="m" style="color: #099;">0</span> <span class="n" style="color: #333;">for</span> <span class="m" style="color: #099;">10</span><span class="p">)</span> <span class="p">=</span> <span class="s1" style="color: #d14;">'non-free/'</span> <span class="k" style="font-weight: 600;">THEN</span> <span class="s1" style="color: #d14;">'non-free'</span> <span class="k" style="font-weight: 600;">ELSE</span> <span class="s1" style="color: #d14;">'main'</span> <span class="k" style="font-weight: 600;">END</span> <span class="k" style="font-weight: 600;">AS</span> <span class="n" style="color: #333;">section</span> <span class="k" style="font-weight: 600;">FROM</span> <span class="n" style="color: #333;">packages</span> <span class="n" style="color: #333;">WHERE</span> <span class="n" style="color: #333;">release</span> <span class="k" style="font-weight: 600;">in</span> <span class="p">(</span><span class="s1" style="color: #d14;">'sid'</span><span class="p">)</span> <span class="k" style="font-weight: 600;">AND</span></span>
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174
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<td class="diff-line-num new_line" data-linenumber="174" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
174
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<pre style="margin: 0;"> <span id="LC174" class="line" lang="mosel"> <span class="k" style="font-weight: 600;">package</span> <span class="k" style="font-weight: 600;">IN</span> <span class="p">(</span><span class="n" style="color: #333;">SELECT</span> <span class="p">*</span> <span class="k" style="font-weight: 600;">FROM</span> <span class="n" style="color: #333;">covid19_packages</span><span class="p">)</span></span>
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<td class="diff-line-num old_line" data-linenumber="175" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
175
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<td class="diff-line-num new_line" data-linenumber="175" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
175
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<pre style="margin: 0;"> <span id="LC175" class="line" lang="mosel"> <span class="p">)</span> <span class="n" style="color: #333;">s</span> <span class="n" style="color: #333;">ON</span> <span class="n" style="color: #333;">s</span><span class="p">.</span><span class="k" style="font-weight: 600;">package</span> <span class="p">=</span> <span class="n" style="color: #333;">co</span><span class="p">.</span><span class="k" style="font-weight: 600;">package</span></span>
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<td class="diff-line-num new old_line" data-linenumber="176" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="176" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
176
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<pre style="margin: 0;">+<span id="LC176" class="line" lang="mosel"> <span class="n" style="color: #333;">LEFT</span> <span class="n" style="color: #333;">JOIN</span> <span class="p">(</span></span>
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<td class="diff-line-num new new_line" data-linenumber="177" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
177
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<pre style="margin: 0;">+<span id="LC177" class="line" lang="mosel"> <span class="n" style="color: #333;">SELECT</span> <span class="k" style="font-weight: 600;">package</span><span class="p">,</span> <span class="n" style="color: #333;">string_agg</span><span class="p">(</span><span class="n" style="color: #333;">release</span><span class="p">,</span> <span class="s1" style="color: #d14;">','</span><span class="p">)</span> <span class="k" style="font-weight: 600;">AS</span> <span class="n" style="color: #333;">releases</span> <span class="k" style="font-weight: 600;">FROM</span> <span class="p">(</span></span>
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<td class="diff-line-num new new_line" data-linenumber="178" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
178
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<pre style="margin: 0;">+<span id="LC178" class="line" lang="mosel"> <span class="n" style="color: #333;">SELECT</span> <span class="n" style="color: #333;">DISTINCT</span> <span class="n" style="color: #333;">p</span><span class="p">.</span><span class="k" style="font-weight: 600;">package</span><span class="p">,</span> <span class="n" style="color: #333;">p</span><span class="p">.</span><span class="n" style="color: #333;">release</span><span class="p">,</span> <span class="n" style="color: #333;">s</span><span class="p">.</span><span class="n" style="color: #333;">sort</span> <span class="k" style="font-weight: 600;">FROM</span> <span class="n" style="color: #333;">packages</span> <span class="n" style="color: #333;">p</span></span>
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<td class="diff-line-num new new_line" data-linenumber="179" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
179
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<pre style="margin: 0;">+<span id="LC179" class="line" lang="mosel"> <span class="n" style="color: #333;">JOIN</span> <span class="n" style="color: #333;">releases</span> <span class="n" style="color: #333;">s</span> <span class="n" style="color: #333;">ON</span> <span class="n" style="color: #333;">p</span><span class="p">.</span><span class="n" style="color: #333;">release</span> <span class="p">=</span> <span class="n" style="color: #333;">s</span><span class="p">.</span><span class="n" style="color: #333;">release</span></span>
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<td class="diff-line-num new new_line" data-linenumber="180" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
180
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<pre style="margin: 0;">+<span id="LC180" class="line" lang="mosel"> <span class="n" style="color: #333;">WHERE</span> <span class="n" style="color: #333;">p</span><span class="p">.</span><span class="n" style="color: #333;">release</span> <span class="k" style="font-weight: 600;">in</span> <span class="p">(</span><span class="s1" style="color: #d14;">'sid'</span><span class="p">,</span> <span class="s1" style="color: #d14;">'bullseye'</span><span class="p">,</span> <span class="s1" style="color: #d14;">'buster'</span><span class="p">)</span> <span class="k" style="font-weight: 600;">AND</span></span>
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<td class="diff-line-num new new_line" data-linenumber="181" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
181
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<pre style="margin: 0;">+<span id="LC181" class="line" lang="mosel"> <span class="k" style="font-weight: 600;">package</span> <span class="k" style="font-weight: 600;">IN</span> <span class="p">(</span><span class="n" style="color: #333;">SELECT</span> <span class="p">*</span> <span class="k" style="font-weight: 600;">FROM</span> <span class="n" style="color: #333;">covid19_packages</span><span class="p">)</span></span>
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<td class="diff-line-num new new_line" data-linenumber="182" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
182
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<pre style="margin: 0;">+<span id="LC182" class="line" lang="mosel"> <span class="n" style="color: #333;">ORDER</span> <span class="n" style="color: #333;">BY</span> <span class="n" style="color: #333;">p</span><span class="p">.</span><span class="k" style="font-weight: 600;">package</span><span class="p">,</span> <span class="n" style="color: #333;">s</span><span class="p">.</span><span class="n" style="color: #333;">sort</span><span class="p">,</span> <span class="n" style="color: #333;">p</span><span class="p">.</span><span class="n" style="color: #333;">release</span></span>
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<td class="diff-line-num new new_line" data-linenumber="183" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
183
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<pre style="margin: 0;">+<span id="LC183" class="line" lang="mosel"> <span class="p">)</span> <span class="n" style="color: #333;">tmp</span> <span class="n" style="color: #333;">GROUP</span> <span class="n" style="color: #333;">BY</span> <span class="k" style="font-weight: 600;">package</span></span>
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<td class="diff-line-num new new_line" data-linenumber="184" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
184
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<pre style="margin: 0;">+<span id="LC184" class="line" lang="mosel"> <span class="p">)</span> <span class="n" style="color: #333;">r</span> <span class="n" style="color: #333;">ON</span> <span class="n" style="color: #333;">r</span><span class="p">.</span><span class="k" style="font-weight: 600;">package</span> <span class="p">=</span> <span class="n" style="color: #333;">co</span><span class="p">.</span><span class="k" style="font-weight: 600;">package</span></span>
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176
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185
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<pre style="margin: 0;"> <span id="LC185" class="line" lang="mosel"> <span class="n" style="color: #333;">ORDER</span> <span class="n" style="color: #333;">BY</span> <span class="k" style="font-weight: 600;">package</span></span>
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177
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186
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<pre style="margin: 0;"> <span id="LC186" class="line" lang="mosel"> <span class="p">;</span></span>
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178
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187
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<pre style="margin: 0;"> <span id="LC187" class="line" lang="mosel"><span class="k" style="font-weight: 600;">END</span><span class="p">;</span></span>
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<a href="https://salsa.debian.org/blends-team/med/-/compare/2e727e5a9c1fbce435e4db6bdbf3a21746d69e53...6f3899b8aaae9be5011455efad1367ec30b72557#6d072c2122e74d0aa0bfeb56f2e3fd56014c34b6"><strong>covid-19_doc/bio_covid-19_dependencies_result</strong></a>
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<pre style="margin: 0;">-<span id="LC1" class="line" lang="mosel"><span class="n" style="color: #333;">Last</span><span class="p">-</span><span class="n" style="color: #333;">Update</span><span class="p">:</span> <span class="n" style="color: #333;">Tue</span><span class="p">,</span> <span class="m" style="color: #099;">12</span> <span class="n" style="color: #333;">May</span> <span class="m" style="color: #099;">2020</span> <span class="m" style="color: #099;">09</span><span class="p">:</span><span class="m" style="color: #099;"><span class="idiff left">23</span></span><span class="p"><span class="idiff">:</span></span><span class="m" style="color: #099;"><span class="idiff right">52</span></span> <span class="p">+</span><span class="m" style="color: #099;">0200</span></span>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="mosel"><span class="n" style="color: #333;">Last</span><span class="p">-</span><span class="n" style="color: #333;">Update</span><span class="p">:</span> <span class="n" style="color: #333;">Tue</span><span class="p">,</span> <span class="m" style="color: #099;">12</span> <span class="n" style="color: #333;">May</span> <span class="m" style="color: #099;">2020</span> <span class="m" style="color: #099;">09</span><span class="p">:</span><span class="m" style="color: #099;"><span class="idiff left">52</span></span><span class="p"><span class="idiff">:</span></span><span class="m" style="color: #099;"><span class="idiff right">09</span></span> <span class="p">+</span><span class="m" style="color: #099;">0200</span></span>
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<pre style="margin: 0;"> <span id="LC2" class="line" lang="mosel"></span>
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<pre style="margin: 0;">-<span id="LC3" class="line" lang="mosel"> <span class="k" style="font-weight: 600;">package</span> <span class="p">|</span> <span class="idiff left"> </span><span class="n" style="color: #333;"><span class="idiff">architectures</span></span><span class="idiff"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff right">section</span></span> </span>
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<pre style="margin: 0;">-<span id="LC4" class="line" lang="mosel"><span class="p">-----------------------------+---------------------<span class="idiff left right">----+</span>----------</span></span>
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<pre style="margin: 0;">-<span id="LC5" class="line" lang="mosel"> <span class="n" style="color: #333;">abacas</span> <span class="p">|</span> <span class="n" style="color: #333;">all</span> <span class="idiff left"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff right">main</span></span></span>
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<pre style="margin: 0;">-<span id="LC6" class="line" lang="mosel"> <span class="n" style="color: #333;">allelecount</span> <span class="p">|</span> <span class="p">|</span> </span>
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<pre style="margin: 0;">-<span id="LC7" class="line" lang="mosel"> <span class="n" style="color: #333;">ascat</span> <span class="p">|</span> <span class="p">|</span> </span>
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<pre style="margin: 0;">-<span id="LC8" class="line" lang="mosel"> <span class="n" style="color: #333;">bcftools</span> <span class="p">|</span> <span class="n" style="color: #333;">amd64</span><span class="p">,</span><span class="n" style="color: #333;">arm64</span><span class="p">,</span><span class="n" style="color: #333;">ppc64el</span> <span class="idiff left"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff right">main</span></span></span>
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<pre style="margin: 0;">-<span id="LC9" class="line" lang="mosel"> <span class="n" style="color: #333;">bedtools</span> <span class="p">|</span> <span class="n" style="color: #333;">amd64</span><span class="p">,</span><span class="n" style="color: #333;">arm64</span><span class="p">,</span><span class="n" style="color: #333;">ppc64el</span> <span class="idiff left"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff right">main</span></span></span>
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<pre style="margin: 0;">-<span id="LC10" class="line" lang="mosel"> <span class="n" style="color: #333;">bio</span><span class="p">-</span><span class="n" style="color: #333;">guppy</span> <span class="p">|</span> <span class="p">|</span> </span>
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<pre style="margin: 0;">-<span id="LC11" class="line" lang="mosel"> <span class="n" style="color: #333;">bowtie2</span> <span class="p">|</span> <span class="n" style="color: #333;">amd64</span><span class="p">,</span><span class="n" style="color: #333;">arm64</span><span class="p">,</span><span class="n" style="color: #333;">ppc64el</span> <span class="idiff left"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff right">main</span></span></span>
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<pre style="margin: 0;">-<span id="LC12" class="line" lang="mosel"> <span class="n" style="color: #333;">busco</span> <span class="p">|</span> <span class="p">|</span> </span>
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<pre style="margin: 0;">-<span id="LC13" class="line" lang="mosel"> <span class="n" style="color: #333;">bustools</span> <span class="p">|</span> <span class="n" style="color: #333;">amd64</span> <span class="idiff left"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff right">main</span></span></span>
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<pre style="margin: 0;">-<span id="LC14" class="line" lang="mosel"> <span class="n" style="color: #333;">bwa</span> <span class="p">|</span> <span class="n" style="color: #333;">amd64</span><span class="p">,</span><span class="n" style="color: #333;">arm64</span><span class="p">,</span><span class="n" style="color: #333;">ppc64el</span> <span class="idiff left"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff right">main</span></span></span>
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<pre style="margin: 0;">-<span id="LC15" class="line" lang="mosel"> <span class="n" style="color: #333;">cat</span> <span class="p">|</span> <span class="p">|</span> </span>
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<pre style="margin: 0;">-<span id="LC16" class="line" lang="mosel"> <span class="n" style="color: #333;">centrifuge</span> <span class="p">|</span> <span class="n" style="color: #333;">amd64</span> <span class="idiff left"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff right">main</span></span></span>
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<pre style="margin: 0;">-<span id="LC17" class="line" lang="mosel"> <span class="n" style="color: #333;">changeo</span> <span class="p">|</span> <span class="n" style="color: #333;">all</span> <span class="idiff left"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff right">main</span></span></span>
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<pre style="margin: 0;">-<span id="LC18" class="line" lang="mosel"> <span class="n" style="color: #333;">cutadapt</span> <span class="p">|</span> <span class="n" style="color: #333;">all</span> <span class="idiff left"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff right">main</span></span></span>
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<pre style="margin: 0;">-<span id="LC19" class="line" lang="mosel"> <span class="n" style="color: #333;">diamond</span><span class="idiff left"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">all</span></span><span class="idiff"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff right"> </span></span>
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<pre style="margin: 0;">-<span id="LC20" class="line" lang="mosel"> <span class="n" style="color: #333;">drop</span><span class="p">-</span><span class="n" style="color: #333;">seq</span><span class="p">-</span><span class="n" style="color: #333;">tools</span> <span class="p">|</span> <span class="p">|</span> </span>
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<pre style="margin: 0;">-<span id="LC21" class="line" lang="mosel"> <span class="n" style="color: #333;">fastp</span> <span class="p">|</span> <span class="n" style="color: #333;">amd64</span><span class="p">,</span><span class="n" style="color: #333;">arm64</span><span class="p">,</span><span class="n" style="color: #333;">ppc64el</span> <span class="idiff left"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff right">main</span></span></span>
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<pre style="margin: 0;">-<span id="LC22" class="line" lang="mosel"> <span class="n" style="color: #333;">fastqc</span> <span class="p">|</span> <span class="n" style="color: #333;">all</span> <span class="idiff left"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff right">main</span></span></span>
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<pre style="margin: 0;">-<span id="LC23" class="line" lang="mosel"> <span class="n" style="color: #333;">filtlong</span> <span class="p">|</span> <span class="p">|</span> </span>
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<pre style="margin: 0;">-<span id="LC24" class="line" lang="mosel"> <span class="n" style="color: #333;">freebayes</span> <span class="p">|</span> <span class="n" style="color: #333;">amd64</span><span class="p">,</span><span class="n" style="color: #333;">arm64</span><span class="p">,</span><span class="n" style="color: #333;">ppc64el</span> <span class="idiff left"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff right">main</span></span></span>
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<pre style="margin: 0;">-<span id="LC25" class="line" lang="mosel"> <span class="n" style="color: #333;">gatk</span> <span class="p">|</span> <span class="p">|</span> </span>
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<pre style="margin: 0;">-<span id="LC26" class="line" lang="mosel"> <span class="n" style="color: #333;">graphmap2</span> <span class="p">|</span> <span class="p">|</span> </span>
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<pre style="margin: 0;">-<span id="LC27" class="line" lang="mosel"> <span class="n" style="color: #333;">ivar</span> <span class="p">|</span> <span class="p">|</span> </span>
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<pre style="margin: 0;">-<span id="LC28" class="line" lang="mosel"> <span class="n" style="color: #333;">kallisto</span> <span class="p">|</span> <span class="n" style="color: #333;">amd64</span><span class="p">,</span><span class="n" style="color: #333;">arm64</span><span class="p">,</span><span class="n" style="color: #333;">ppc64el</span> <span class="idiff left"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff right">main</span></span></span>
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<pre style="margin: 0;">-<span id="LC29" class="line" lang="mosel"> <span class="n" style="color: #333;">kraken2</span> <span class="p">|</span> <span class="n" style="color: #333;">amd64</span><span class="p">,</span><span class="n" style="color: #333;">arm64</span><span class="p">,</span><span class="n" style="color: #333;">ppc64el</span> <span class="idiff left"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff right">main</span></span></span>
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<pre style="margin: 0;">-<span id="LC30" class="line" lang="mosel"> <span class="n" style="color: #333;">libhts</span><span class="p">-</span><span class="n" style="color: #333;">dev</span> <span class="p">|</span> <span class="n" style="color: #333;">amd64</span><span class="p">,</span><span class="n" style="color: #333;">arm64</span><span class="p">,</span><span class="n" style="color: #333;">ppc64el</span> <span class="idiff left"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff right">main</span></span></span>
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<pre style="margin: 0;">-<span id="LC31" class="line" lang="mosel"> <span class="n" style="color: #333;">lumpy</span> <span class="p">|</span> <span class="p">|</span> </span>
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<pre style="margin: 0;">-<span id="LC32" class="line" lang="mosel"> <span class="n" style="color: #333;">manta</span> <span class="p">|</span> <span class="p">|</span> </span>
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<pre style="margin: 0;">-<span id="LC33" class="line" lang="mosel"> <span class="n" style="color: #333;">megahit</span> <span class="p">|</span> <span class="p">|</span> </span>
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<pre style="margin: 0;">-<span id="LC34" class="line" lang="mosel"> <span class="n" style="color: #333;">metabat</span> <span class="p">|</span> <span class="p">|</span> </span>
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<pre style="margin: 0;">-<span id="LC35" class="line" lang="mosel"> <span class="n" style="color: #333;">minia</span> <span class="p">|</span> <span class="n" style="color: #333;">amd64</span><span class="p">,</span><span class="n" style="color: #333;">arm64</span><span class="p">,</span><span class="n" style="color: #333;">ppc64el</span> <span class="idiff left"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff right">main</span></span></span>
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36
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<pre style="margin: 0;">-<span id="LC36" class="line" lang="mosel"> <span class="n" style="color: #333;">minimap2</span> <span class="p">|</span> <span class="n" style="color: #333;">amd64</span><span class="p">,</span><span class="n" style="color: #333;">arm64</span><span class="p">,</span><span class="n" style="color: #333;">ppc64el</span> <span class="idiff left"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff right">main</span></span></span>
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<pre style="margin: 0;">-<span id="LC37" class="line" lang="mosel"> <span class="n" style="color: #333;">multiqc</span> <span class="p">|</span> <span class="n" style="color: #333;">all</span> <span class="idiff left"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff right">main</span></span></span>
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38
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<pre style="margin: 0;">-<span id="LC38" class="line" lang="mosel"> <span class="n" style="color: #333;">muscle</span> <span class="p">|</span> <span class="n" style="color: #333;">amd64</span><span class="p">,</span><span class="n" style="color: #333;">arm64</span><span class="p">,</span><span class="n" style="color: #333;">ppc64el</span> <span class="idiff left"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff right">main</span></span></span>
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39
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<pre style="margin: 0;">-<span id="LC39" class="line" lang="mosel"> <span class="n" style="color: #333;">nanolyse</span> <span class="p">|</span> <span class="p">|</span> </span>
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<pre style="margin: 0;">-<span id="LC40" class="line" lang="mosel"> <span class="n" style="color: #333;">nanoplot</span> <span class="p">|</span> <span class="p">|</span> </span>
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<pre style="margin: 0;">-<span id="LC41" class="line" lang="mosel"> <span class="n" style="color: #333;">ncbi</span><span class="p">-</span><span class="n" style="color: #333;">blast</span><span class="p">+</span> <span class="p">|</span> <span class="n" style="color: #333;">amd64</span><span class="p">,</span><span class="n" style="color: #333;">arm64</span><span class="p">,</span><span class="n" style="color: #333;">ppc64el</span> <span class="idiff left"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff right">main</span></span></span>
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<pre style="margin: 0;">-<span id="LC42" class="line" lang="mosel"> <span class="n" style="color: #333;">nextflow</span> <span class="p">|</span> <span class="p">|</span> </span>
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<pre style="margin: 0;">-<span id="LC43" class="line" lang="mosel"> <span class="n" style="color: #333;">nf</span><span class="p">-</span><span class="n" style="color: #333;">core</span> <span class="p">|</span> <span class="p">|</span> </span>
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<pre style="margin: 0;">-<span id="LC44" class="line" lang="mosel"> <span class="n" style="color: #333;">parallel</span><span class="p">-</span><span class="n" style="color: #333;">fastq</span><span class="p">-</span><span class="n" style="color: #333;">dump</span> <span class="p">|</span> <span class="p">|</span> </span>
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<pre style="margin: 0;">-<span id="LC45" class="line" lang="mosel"> <span class="n" style="color: #333;">picard</span><span class="p">-</span><span class="n" style="color: #333;">tools</span> <span class="p">|</span> <span class="n" style="color: #333;">a<span class="idiff left">ll</span></span><span class="p"><span class="idiff">,</span></span><span class="n" style="color: #333;"><span class="idiff">amd64</span></span><span class="idiff"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff right">main</span></span></span>
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<pre style="margin: 0;">-<span id="LC46" class="line" lang="mosel"> <span class="n" style="color: #333;">porechop</span> <span class="p">|</span> <span class="n" style="color: #333;">amd64</span><span class="p">,</span><span class="n" style="color: #333;">arm64</span><span class="p">,</span><span class="n" style="color: #333;">ppc64el</span> <span class="idiff left"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff right">main</span></span></span>
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<pre style="margin: 0;">-<span id="LC47" class="line" lang="mosel"> <span class="n" style="color: #333;">presto</span> <span class="p">|</span> <span class="p">|</span> </span>
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<pre style="margin: 0;">-<span id="LC48" class="line" lang="mosel"> <span class="n" style="color: #333;">prodigal</span> <span class="p">|</span> <span class="n" style="color: #333;">amd64</span><span class="p">,</span><span class="n" style="color: #333;">arm64</span><span class="p">,</span><span class="n" style="color: #333;">ppc64el</span> <span class="idiff left"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff right">main</span></span></span>
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<pre style="margin: 0;">-<span id="LC49" class="line" lang="mosel"> <span class="n" style="color: #333;">pycoqc</span> <span class="p">|</span> <span class="n" style="color: #333;">all</span> <span class="idiff left"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff right">main</span></span></span>
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<pre style="margin: 0;">-<span id="LC50" class="line" lang="mosel"> <span class="n" style="color: #333;">python3</span><span class="p">-</span><span class="n" style="color: #333;">biopython</span> <span class="p">|</span> <span class="n" style="color: #333;">amd64</span><span class="p">,</span><span class="n" style="color: #333;">arm64</span><span class="p">,</span><span class="n" style="color: #333;">ppc64el</span> <span class="idiff left"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff right">main</span></span></span>
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<pre style="margin: 0;">-<span id="LC51" class="line" lang="mosel"> <span class="n" style="color: #333;">python3</span><span class="p">-</span><span class="n" style="color: #333;">deeptools</span> <span class="p">|</span> <span class="n" style="color: #333;">all</span> <span class="idiff left"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff right">main</span></span></span>
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<pre style="margin: 0;">-<span id="LC52" class="line" lang="mosel"> <span class="n" style="color: #333;">python3</span><span class="p">-</span><span class="n" style="color: #333;">htseq</span> <span class="p">|</span> <span class="n" style="color: #333;">amd64</span><span class="p">,</span><span class="n" style="color: #333;">arm64</span><span class="p">,</span><span class="n" style="color: #333;">ppc64el</span> <span class="idiff left"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff right">main</span></span></span>
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<pre style="margin: 0;">-<span id="LC53" class="line" lang="mosel"> <span class="n" style="color: #333;">python3</span><span class="p">-</span><span class="n" style="color: #333;">numpy</span> <span class="p">|</span> <span class="n" style="color: #333;">amd64</span><span class="p">,</span><span class="n" style="color: #333;">arm64</span><span class="p">,</span><span class="n" style="color: #333;">ppc64el</span> <span class="idiff left"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff right">main</span></span></span>
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<pre style="margin: 0;">-<span id="LC54" class="line" lang="mosel"> <span class="n" style="color: #333;">python3</span><span class="p">-</span><span class="n" style="color: #333;">pandas</span> <span class="p">|</span> <span class="n" style="color: #333;">all</span> <span class="idiff left"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff right">main</span></span></span>
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<pre style="margin: 0;">-<span id="LC55" class="line" lang="mosel"> <span class="n" style="color: #333;">qcat</span> <span class="p">|</span> <span class="n" style="color: #333;">all</span> <span class="idiff left"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff right">main</span></span></span>
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<pre style="margin: 0;">-<span id="LC56" class="line" lang="mosel"> <span class="n" style="color: #333;">qualimap</span> <span class="p">|</span> <span class="p">|</span> </span>
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<pre style="margin: 0;">-<span id="LC57" class="line" lang="mosel"> <span class="n" style="color: #333;">quast</span> <span class="p">|</span> <span class="p">|</span> </span>
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<pre style="margin: 0;">-<span id="LC58" class="line" lang="mosel"> <span class="n" style="color: #333;">radiant</span> <span class="p">|</span> <span class="n" style="color: #333;">all</span> <span class="idiff left"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff right">main</span></span></span>
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<pre style="margin: 0;">-<span id="LC59" class="line" lang="mosel"> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">bioc</span><span class="p">-</span><span class="n" style="color: #333;">deseq2</span> <span class="p">|</span> <span class="n" style="color: #333;">amd64</span><span class="p">,</span><span class="n" style="color: #333;">arm64</span><span class="p">,</span><span class="n" style="color: #333;">ppc64el</span> <span class="idiff left"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff right">main</span></span></span>
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<pre style="margin: 0;">-<span id="LC60" class="line" lang="mosel"> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">bioc</span><span class="p">-</span><span class="n" style="color: #333;">rtracklayer</span> <span class="p">|</span> <span class="n" style="color: #333;">amd64</span><span class="p">,</span><span class="n" style="color: #333;">arm64</span><span class="p">,</span><span class="n" style="color: #333;">ppc64el</span> <span class="idiff left"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff right">main</span></span></span>
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<pre style="margin: 0;">-<span id="LC61" class="line" lang="mosel"> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">bioc</span><span class="p">-</span><span class="n" style="color: #333;">summarizedexperiment</span> <span class="p">|</span> <span class="n" style="color: #333;">all</span> <span class="idiff left"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff right">main</span></span></span>
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<pre style="margin: 0;">-<span id="LC62" class="line" lang="mosel"> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">bioc</span><span class="p">-</span><span class="n" style="color: #333;">tximport</span> <span class="p">|</span> <span class="n" style="color: #333;">all</span> <span class="idiff left"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff right">main</span></span></span>
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<pre style="margin: 0;">-<span id="LC63" class="line" lang="mosel"> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">cran</span><span class="p">-</span><span class="n" style="color: #333;">alakazam</span> <span class="p">|</span> <span class="n" style="color: #333;">amd64</span><span class="p">,</span><span class="n" style="color: #333;">arm64</span><span class="p">,</span><span class="n" style="color: #333;">ppc64el</span> <span class="idiff left"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff right">main</span></span></span>
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<pre style="margin: 0;">-<span id="LC64" class="line" lang="mosel"> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">cran</span><span class="p">-</span><span class="n" style="color: #333;">corrplot</span> <span class="p">|</span> <span class="n" style="color: #333;">all</span> <span class="idiff left"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff right">main</span></span></span>
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<pre style="margin: 0;">-<span id="LC65" class="line" lang="mosel"> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">cran</span><span class="p">-</span><span class="n" style="color: #333;">crosstalk</span> <span class="p">|</span> <span class="n" style="color: #333;">all</span> <span class="idiff left"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff right">main</span></span></span>
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<pre style="margin: 0;">-<span id="LC66" class="line" lang="mosel"> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">cran</span><span class="p">-</span><span class="n" style="color: #333;">data</span><span class="p">.</span><span class="n" style="color: #333;">table</span> <span class="p">|</span> <span class="n" style="color: #333;">amd64</span><span class="p">,</span><span class="n" style="color: #333;">arm64</span><span class="p">,</span><span class="n" style="color: #333;">ppc64el</span> <span class="idiff left"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff right">main</span></span></span>
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<pre style="margin: 0;">-<span id="LC67" class="line" lang="mosel"> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">cran</span><span class="p">-</span><span class="n" style="color: #333;">dt</span> <span class="p">|</span> <span class="n" style="color: #333;">all</span> <span class="idiff left"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff right">main</span></span></span>
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<pre style="margin: 0;">-<span id="LC68" class="line" lang="mosel"> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">cran</span><span class="p">-</span><span class="n" style="color: #333;">ggplot2</span> <span class="p">|</span> <span class="n" style="color: #333;">all</span> <span class="idiff left"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff right">main</span></span></span>
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<pre style="margin: 0;">-<span id="LC69" class="line" lang="mosel"> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">cran</span><span class="p">-</span><span class="n" style="color: #333;">ggrepel</span> <span class="p">|</span> <span class="n" style="color: #333;">amd64</span><span class="p">,</span><span class="n" style="color: #333;">arm64</span><span class="p">,</span><span class="n" style="color: #333;">ppc64el</span> <span class="idiff left"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff right">main</span></span></span>
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<pre style="margin: 0;">-<span id="LC70" class="line" lang="mosel"> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">cran</span><span class="p">-</span><span class="n" style="color: #333;">gprofiler</span> <span class="p">|</span> <span class="n" style="color: #333;">all</span> <span class="idiff left"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff right">main</span></span></span>
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<pre style="margin: 0;">-<span id="LC71" class="line" lang="mosel"> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">cran</span><span class="p">-</span><span class="n" style="color: #333;">locfit</span> <span class="p">|</span> <span class="n" style="color: #333;">amd64</span><span class="p">,</span><span class="n" style="color: #333;">arm64</span><span class="p">,</span><span class="n" style="color: #333;">ppc64el</span> <span class="idiff left"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff right">main</span></span></span>
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<pre style="margin: 0;">-<span id="LC72" class="line" lang="mosel"> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">cran</span><span class="p">-</span><span class="n" style="color: #333;">pheatmap</span> <span class="p">|</span> <span class="n" style="color: #333;">all</span> <span class="idiff left"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff right">main</span></span></span>
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<pre style="margin: 0;">-<span id="LC73" class="line" lang="mosel"> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">cran</span><span class="p">-</span><span class="n" style="color: #333;">plotly</span> <span class="p">|</span> <span class="n" style="color: #333;">all</span> <span class="idiff left"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff right">main</span></span></span>
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74
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<pre style="margin: 0;">-<span id="LC74" class="line" lang="mosel"> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">cran</span><span class="p">-</span><span class="n" style="color: #333;">reshape2</span> <span class="p">|</span> <span class="n" style="color: #333;">a<span class="idiff left">ll</span></span><span class="p"><span class="idiff">,</span></span><span class="n" style="color: #333;"><span class="idiff">amd64</span></span><span class="p"><span class="idiff">,</span></span><span class="n" style="color: #333;"><span class="idiff">arm64</span></span><span class="p"><span class="idiff">,</span></span><span class="n" style="color: #333;"><span class="idiff">ppc64el</span></span><span class="idiff"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff right">main</span></span></span>
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75
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<pre style="margin: 0;">-<span id="LC75" class="line" lang="mosel"> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">cran</span><span class="p">-</span><span class="n" style="color: #333;">rjson</span> <span class="p">|</span> <span class="n" style="color: #333;">amd64</span><span class="p">,</span><span class="n" style="color: #333;">arm64</span><span class="p">,</span><span class="n" style="color: #333;">ppc64el</span> <span class="idiff left"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff right">main</span></span></span>
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<pre style="margin: 0;">-<span id="LC76" class="line" lang="mosel"> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">cran</span><span class="p">-</span><span class="n" style="color: #333;">rlang</span> <span class="p">|</span> <span class="n" style="color: #333;">amd64</span><span class="p">,</span><span class="n" style="color: #333;">arm64</span><span class="p">,</span><span class="n" style="color: #333;">ppc64el</span> <span class="idiff left"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff right">main</span></span></span>
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<pre style="margin: 0;">-<span id="LC77" class="line" lang="mosel"> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">cran</span><span class="p">-</span><span class="n" style="color: #333;">rmarkdown</span> <span class="p">|</span> <span class="n" style="color: #333;">all</span> <span class="idiff left"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff right">main</span></span></span>
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78
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<pre style="margin: 0;">-<span id="LC78" class="line" lang="mosel"> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">cran</span><span class="p">-</span><span class="n" style="color: #333;">scales</span> <span class="p">|</span> <span class="n" style="color: #333;">all</span><span class="p"><span class="idiff left">,</span></span><span class="n" style="color: #333;"><span class="idiff">amd64</span></span><span class="p"><span class="idiff">,</span></span><span class="n" style="color: #333;"><span class="idiff">arm64</span></span><span class="p"><span class="idiff">,</span></span><span class="n" style="color: #333;"><span class="idiff">ppc64el</span></span><span class="idiff"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff right">main</span></span></span>
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79
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<pre style="margin: 0;">-<span id="LC79" class="line" lang="mosel"> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">cran</span><span class="p">-</span><span class="n" style="color: #333;">shazam</span> <span class="p">|</span> <span class="n" style="color: #333;">all</span> <span class="idiff left"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff right">main</span></span></span>
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<pre style="margin: 0;">-<span id="LC80" class="line" lang="mosel"> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">cran</span><span class="p">-</span><span class="n" style="color: #333;">tigger</span> <span class="p">|</span> <span class="n" style="color: #333;">all</span> <span class="idiff left"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff right">main</span></span></span>
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<pre style="margin: 0;">-<span id="LC81" class="line" lang="mosel"> <span class="n" style="color: #333;">rna</span><span class="p">-</span><span class="n" style="color: #333;">star</span> <span class="p">|</span> <span class="n" style="color: #333;">amd64</span><span class="p">,</span><span class="n" style="color: #333;">arm64</span><span class="p">,</span><span class="n" style="color: #333;">ppc64el</span> <span class="idiff left"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff right">main</span></span></span>
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82
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<pre style="margin: 0;">-<span id="LC82" class="line" lang="mosel"> <span class="n" style="color: #333;">salmon</span> <span class="p">|</span> <span class="n" style="color: #333;">amd64</span> <span class="idiff left"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff right">main</span></span></span>
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<pre style="margin: 0;">-<span id="LC83" class="line" lang="mosel"> <span class="n" style="color: #333;">samtools</span> <span class="p">|</span> <span class="n" style="color: #333;">amd64</span><span class="p">,</span><span class="n" style="color: #333;">arm64</span><span class="p">,</span><span class="n" style="color: #333;">ppc64el</span> <span class="idiff left"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff right">main</span></span></span>
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84
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<pre style="margin: 0;">-<span id="LC84" class="line" lang="mosel"> <span class="n" style="color: #333;">snakemake</span> <span class="p">|</span> <span class="n" style="color: #333;">all</span> <span class="idiff left"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff right">main</span></span></span>
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85
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<pre style="margin: 0;">-<span id="LC85" class="line" lang="mosel"> <span class="n" style="color: #333;">snpeff</span> <span class="p">|</span> <span class="p">|</span> </span>
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<pre style="margin: 0;">-<span id="LC86" class="line" lang="mosel"> <span class="n" style="color: #333;">snpsift</span> <span class="p">|</span> <span class="p">|</span> </span>
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87
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<pre style="margin: 0;">-<span id="LC87" class="line" lang="mosel"> <span class="n" style="color: #333;">spades</span> <span class="p">|</span> <span class="n" style="color: #333;">amd64</span> <span class="idiff left"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff right">main</span></span></span>
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88
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<pre style="margin: 0;">-<span id="LC88" class="line" lang="mosel"> <span class="n" style="color: #333;">sra</span><span class="p">-</span><span class="n" style="color: #333;">toolkit</span> <span class="p">|</span> <span class="n" style="color: #333;">amd64</span> <span class="idiff left"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff right">main</span></span></span>
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89
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<pre style="margin: 0;">-<span id="LC89" class="line" lang="mosel"> <span class="n" style="color: #333;">strelka</span> <span class="p">|</span> <span class="p">|</span> </span>
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90
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<pre style="margin: 0;">-<span id="LC90" class="line" lang="mosel"> <span class="n" style="color: #333;">tiddit</span> <span class="p">|</span> <span class="p">|</span> </span>
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91
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<pre style="margin: 0;">-<span id="LC91" class="line" lang="mosel"> <span class="nf" style="color: #900; font-weight: 600;">trim</span><span class="p">-</span><span class="n" style="color: #333;">galore</span> <span class="p">|</span> <span class="n" style="color: #333;">all</span> <span class="idiff left"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff right">main</span></span></span>
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92
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<pre style="margin: 0;">-<span id="LC92" class="line" lang="mosel"> <span class="n" style="color: #333;">unicycler</span> <span class="p">|</span> <span class="n" style="color: #333;">amd64</span> <span class="idiff left"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff right">main</span></span></span>
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93
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<pre style="margin: 0;">-<span id="LC93" class="line" lang="mosel"> <span class="n" style="color: #333;">varscan</span> <span class="p">|</span> <span class="n" style="color: #333;">amd64</span> <span class="idiff left"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">non</span></span><span class="p"><span class="idiff">-</span></span><span class="n" style="color: #333;"><span class="idiff right">free</span></span></span>
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<pre style="margin: 0;">-<span id="LC94" class="line" lang="mosel"> <span class="n" style="color: #333;">vcftools</span> <span class="p">|</span> <span class="n" style="color: #333;">amd64</span><span class="p">,</span><span class="n" style="color: #333;">arm64</span><span class="p">,</span><span class="n" style="color: #333;">ppc64el</span> <span class="idiff left"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff right">main</span></span></span>
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95
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<pre style="margin: 0;">-<span id="LC95" class="line" lang="mosel"> <span class="n" style="color: #333;">vep</span> <span class="p">|</span> <span class="p">|</span> </span>
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96
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<pre style="margin: 0;">-<span id="LC96" class="line" lang="mosel"> <span class="n" style="color: #333;">vg</span> <span class="p">|</span> <span class="n" style="color: #333;">amd64</span> <span class="idiff left"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff right">main</span></span></span>
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3
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<pre style="margin: 0;">+<span id="LC3" class="line" lang="mosel"> <span class="k" style="font-weight: 600;">package</span> <span class="p">|</span> <span class="n" style="color: #333;"><span class="idiff left">architectures</span></span><span class="idiff"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">section</span></span><span class="idiff"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">releases</span></span><span class="idiff right"> </span> </span>
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4
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<pre style="margin: 0;">+<span id="LC4" class="line" lang="mosel"><span class="p">-----------------------------+---------------------<span class="idiff left right">+----------+-----------</span>----------</span></span>
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<pre style="margin: 0;">+<span id="LC5" class="line" lang="mosel"> <span class="n" style="color: #333;">abacas</span> <span class="p">|</span> <span class="n" style="color: #333;">all</span> <span class="p"><span class="idiff left">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">main</span></span><span class="idiff"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">buster</span></span><span class="p"><span class="idiff">,</span></span><span class="n" style="color: #333;"><span class="idiff">bullseye</span></span><span class="p"><span class="idiff">,</span></span><span class="n" style="color: #333;"><span class="idiff right">sid</span></span></span>
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6
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<pre style="margin: 0;">+<span id="LC6" class="line" lang="mosel"> <span class="n" style="color: #333;">allelecount</span> <span class="p">|</span> <span class="p"><span class="idiff left">|</span></span><span class="idiff right"> </span> <span class="p">|</span> </span>
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7
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<pre style="margin: 0;">+<span id="LC7" class="line" lang="mosel"> <span class="n" style="color: #333;">ascat</span> <span class="p">|</span> <span class="p"><span class="idiff left">|</span></span><span class="idiff right"> </span> <span class="p">|</span> </span>
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<td class="diff-line-num new new_line" data-linenumber="8" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
8
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<pre style="margin: 0;">+<span id="LC8" class="line" lang="mosel"> <span class="n" style="color: #333;">bcftools</span> <span class="p">|</span> <span class="n" style="color: #333;">amd64</span><span class="p">,</span><span class="n" style="color: #333;">arm64</span><span class="p">,</span><span class="n" style="color: #333;">ppc64el</span> <span class="p"><span class="idiff left">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">main</span></span><span class="idiff"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">buster</span></span><span class="p"><span class="idiff">,</span></span><span class="n" style="color: #333;"><span class="idiff">bullseye</span></span><span class="p"><span class="idiff">,</span></span><span class="n" style="color: #333;"><span class="idiff right">sid</span></span></span>
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<td class="diff-line-num new new_line" data-linenumber="9" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
9
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<pre style="margin: 0;">+<span id="LC9" class="line" lang="mosel"> <span class="n" style="color: #333;">bedtools</span> <span class="p">|</span> <span class="n" style="color: #333;">amd64</span><span class="p">,</span><span class="n" style="color: #333;">arm64</span><span class="p">,</span><span class="n" style="color: #333;">ppc64el</span> <span class="p"><span class="idiff left">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">main</span></span><span class="idiff"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">buster</span></span><span class="p"><span class="idiff">,</span></span><span class="n" style="color: #333;"><span class="idiff">bullseye</span></span><span class="p"><span class="idiff">,</span></span><span class="n" style="color: #333;"><span class="idiff right">sid</span></span></span>
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<td class="diff-line-num new new_line" data-linenumber="10" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
10
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<pre style="margin: 0;">+<span id="LC10" class="line" lang="mosel"> <span class="n" style="color: #333;">bio</span><span class="p">-</span><span class="n" style="color: #333;">guppy</span> <span class="p">|</span> <span class="p"><span class="idiff left">|</span></span><span class="idiff right"> </span> <span class="p">|</span> </span>
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<td class="diff-line-num new new_line" data-linenumber="11" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
11
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<pre style="margin: 0;">+<span id="LC11" class="line" lang="mosel"> <span class="n" style="color: #333;">bowtie2</span> <span class="p">|</span> <span class="n" style="color: #333;">amd64</span><span class="p">,</span><span class="n" style="color: #333;">arm64</span><span class="p">,</span><span class="n" style="color: #333;">ppc64el</span> <span class="p"><span class="idiff left">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">main</span></span><span class="idiff"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">buster</span></span><span class="p"><span class="idiff">,</span></span><span class="n" style="color: #333;"><span class="idiff">bullseye</span></span><span class="p"><span class="idiff">,</span></span><span class="n" style="color: #333;"><span class="idiff right">sid</span></span></span>
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<td class="diff-line-num new new_line" data-linenumber="12" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
12
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<pre style="margin: 0;">+<span id="LC12" class="line" lang="mosel"> <span class="n" style="color: #333;">busco</span> <span class="p">|</span> <span class="p"><span class="idiff left">|</span></span><span class="idiff right"> </span> <span class="p">|</span> </span>
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<td class="diff-line-num new new_line" data-linenumber="13" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
13
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<pre style="margin: 0;">+<span id="LC13" class="line" lang="mosel"> <span class="n" style="color: #333;">bustools</span> <span class="p">|</span> <span class="n" style="color: #333;">amd64</span> <span class="p"><span class="idiff left">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">main</span></span><span class="idiff"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">bullseye</span></span><span class="p"><span class="idiff">,</span></span><span class="n" style="color: #333;"><span class="idiff right">sid</span></span></span>
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<td class="diff-line-num new new_line" data-linenumber="14" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
14
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<pre style="margin: 0;">+<span id="LC14" class="line" lang="mosel"> <span class="n" style="color: #333;">bwa</span> <span class="p">|</span> <span class="n" style="color: #333;">amd64</span><span class="p">,</span><span class="n" style="color: #333;">arm64</span><span class="p">,</span><span class="n" style="color: #333;">ppc64el</span> <span class="p"><span class="idiff left">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">main</span></span><span class="idiff"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">buster</span></span><span class="p"><span class="idiff">,</span></span><span class="n" style="color: #333;"><span class="idiff">bullseye</span></span><span class="p"><span class="idiff">,</span></span><span class="n" style="color: #333;"><span class="idiff right">sid</span></span></span>
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<td class="diff-line-num new new_line" data-linenumber="15" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
15
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<pre style="margin: 0;">+<span id="LC15" class="line" lang="mosel"> <span class="n" style="color: #333;">cat</span> <span class="p">|</span> <span class="p"><span class="idiff left">|</span></span><span class="idiff right"> </span> <span class="p">|</span> </span>
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<td class="diff-line-num new new_line" data-linenumber="16" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
16
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<pre style="margin: 0;">+<span id="LC16" class="line" lang="mosel"> <span class="n" style="color: #333;">centrifuge</span> <span class="p">|</span> <span class="n" style="color: #333;">amd64</span> <span class="p"><span class="idiff left">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">main</span></span><span class="idiff"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">buster</span></span><span class="p"><span class="idiff">,</span></span><span class="n" style="color: #333;"><span class="idiff">bullseye</span></span><span class="p"><span class="idiff">,</span></span><span class="n" style="color: #333;"><span class="idiff right">sid</span></span></span>
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<td class="diff-line-num new new_line" data-linenumber="17" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
17
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<pre style="margin: 0;">+<span id="LC17" class="line" lang="mosel"> <span class="n" style="color: #333;">changeo</span> <span class="p">|</span> <span class="n" style="color: #333;">all</span> <span class="p"><span class="idiff left">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">main</span></span><span class="idiff"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">buster</span></span><span class="p"><span class="idiff">,</span></span><span class="n" style="color: #333;"><span class="idiff">bullseye</span></span><span class="p"><span class="idiff">,</span></span><span class="n" style="color: #333;"><span class="idiff right">sid</span></span></span>
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<pre style="margin: 0;">+<span id="LC18" class="line" lang="mosel"> <span class="n" style="color: #333;">cutadapt</span> <span class="p">|</span> <span class="n" style="color: #333;">all</span> <span class="p"><span class="idiff left">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">main</span></span><span class="idiff"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">buster</span></span><span class="p"><span class="idiff">,</span></span><span class="n" style="color: #333;"><span class="idiff">bullseye</span></span><span class="p"><span class="idiff">,</span></span><span class="n" style="color: #333;"><span class="idiff right">sid</span></span></span>
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<td class="diff-line-num new new_line" data-linenumber="19" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC19" class="line" lang="mosel"> <span class="n" style="color: #333;">diamond</span><span class="p"><span class="idiff left">-</span></span><span class="n" style="color: #333;"><span class="idiff">aligner</span></span><span class="idiff"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">amd64</span></span><span class="p"><span class="idiff">,</span></span><span class="n" style="color: #333;"><span class="idiff">arm64</span></span><span class="p"><span class="idiff">,</span></span><span class="n" style="color: #333;"><span class="idiff">ppc64el</span></span><span class="idiff"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">main</span></span><span class="idiff"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">buster</span></span><span class="p"><span class="idiff">,</span></span><span class="n" style="color: #333;"><span class="idiff">bullseye</span></span><span class="p"><span class="idiff">,</span></span><span class="n" style="color: #333;"><span class="idiff right">sid</span></span></span>
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<pre style="margin: 0;">+<span id="LC20" class="line" lang="mosel"> <span class="n" style="color: #333;">drop</span><span class="p">-</span><span class="n" style="color: #333;">seq</span><span class="p">-</span><span class="n" style="color: #333;">tools</span> <span class="p">|</span> <span class="p"><span class="idiff left">|</span></span><span class="idiff right"> </span> <span class="p">|</span> </span>
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<td class="diff-line-num new new_line" data-linenumber="21" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC21" class="line" lang="mosel"> <span class="n" style="color: #333;">fastp</span> <span class="p">|</span> <span class="n" style="color: #333;">amd64</span><span class="p">,</span><span class="n" style="color: #333;">arm64</span><span class="p">,</span><span class="n" style="color: #333;">ppc64el</span> <span class="p"><span class="idiff left">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">main</span></span><span class="idiff"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">buster</span></span><span class="p"><span class="idiff">,</span></span><span class="n" style="color: #333;"><span class="idiff">bullseye</span></span><span class="p"><span class="idiff">,</span></span><span class="n" style="color: #333;"><span class="idiff right">sid</span></span></span>
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<pre style="margin: 0;">+<span id="LC22" class="line" lang="mosel"> <span class="n" style="color: #333;">fastqc</span> <span class="p">|</span> <span class="n" style="color: #333;">all</span> <span class="p"><span class="idiff left">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">main</span></span><span class="idiff"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">buster</span></span><span class="p"><span class="idiff">,</span></span><span class="n" style="color: #333;"><span class="idiff">bullseye</span></span><span class="p"><span class="idiff">,</span></span><span class="n" style="color: #333;"><span class="idiff right">sid</span></span></span>
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<pre style="margin: 0;">+<span id="LC23" class="line" lang="mosel"> <span class="n" style="color: #333;">filtlong</span> <span class="p">|</span> <span class="p"><span class="idiff left">|</span></span><span class="idiff right"> </span> <span class="p">|</span> </span>
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<pre style="margin: 0;">+<span id="LC24" class="line" lang="mosel"> <span class="n" style="color: #333;">freebayes</span> <span class="p">|</span> <span class="n" style="color: #333;">amd64</span><span class="p">,</span><span class="n" style="color: #333;">arm64</span><span class="p">,</span><span class="n" style="color: #333;">ppc64el</span> <span class="p"><span class="idiff left">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">main</span></span><span class="idiff"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">buster</span></span><span class="p"><span class="idiff">,</span></span><span class="n" style="color: #333;"><span class="idiff">bullseye</span></span><span class="p"><span class="idiff">,</span></span><span class="n" style="color: #333;"><span class="idiff right">sid</span></span></span>
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<td class="diff-line-num new new_line" data-linenumber="25" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC25" class="line" lang="mosel"> <span class="n" style="color: #333;">gatk</span> <span class="p">|</span> <span class="p"><span class="idiff left">|</span></span><span class="idiff right"> </span> <span class="p">|</span> </span>
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<pre style="margin: 0;">+<span id="LC26" class="line" lang="mosel"> <span class="n" style="color: #333;">graphmap2</span> <span class="p">|</span> <span class="p"><span class="idiff left">|</span></span><span class="idiff right"> </span> <span class="p">|</span> </span>
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<pre style="margin: 0;">+<span id="LC27" class="line" lang="mosel"> <span class="n" style="color: #333;">ivar</span> <span class="p">|</span> <span class="p"><span class="idiff left">|</span></span><span class="idiff right"> </span> <span class="p">|</span> </span>
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<td class="diff-line-num new new_line" data-linenumber="28" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC28" class="line" lang="mosel"> <span class="n" style="color: #333;">kallisto</span> <span class="p">|</span> <span class="n" style="color: #333;">amd64</span><span class="p">,</span><span class="n" style="color: #333;">arm64</span><span class="p">,</span><span class="n" style="color: #333;">ppc64el</span> <span class="p"><span class="idiff left">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">main</span></span><span class="idiff"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">bullseye</span></span><span class="p"><span class="idiff">,</span></span><span class="n" style="color: #333;"><span class="idiff right">sid</span></span></span>
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<td class="diff-line-num new new_line" data-linenumber="29" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC29" class="line" lang="mosel"> <span class="n" style="color: #333;">kraken2</span> <span class="p">|</span> <span class="n" style="color: #333;">amd64</span><span class="p">,</span><span class="n" style="color: #333;">arm64</span><span class="p">,</span><span class="n" style="color: #333;">ppc64el</span> <span class="p"><span class="idiff left">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">main</span></span><span class="idiff"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">bullseye</span></span><span class="p"><span class="idiff">,</span></span><span class="n" style="color: #333;"><span class="idiff right">sid</span></span></span>
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<td class="diff-line-num new new_line" data-linenumber="30" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC30" class="line" lang="mosel"> <span class="n" style="color: #333;">libhts</span><span class="p">-</span><span class="n" style="color: #333;">dev</span> <span class="p">|</span> <span class="n" style="color: #333;">amd64</span><span class="p">,</span><span class="n" style="color: #333;">arm64</span><span class="p">,</span><span class="n" style="color: #333;">ppc64el</span> <span class="p"><span class="idiff left">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">main</span></span><span class="idiff"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">buster</span></span><span class="p"><span class="idiff">,</span></span><span class="n" style="color: #333;"><span class="idiff">bullseye</span></span><span class="p"><span class="idiff">,</span></span><span class="n" style="color: #333;"><span class="idiff right">sid</span></span></span>
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<td class="diff-line-num new new_line" data-linenumber="31" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
31
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<pre style="margin: 0;">+<span id="LC31" class="line" lang="mosel"> <span class="n" style="color: #333;">lumpy</span> <span class="p">|</span> <span class="p"><span class="idiff left">|</span></span><span class="idiff right"> </span> <span class="p">|</span> </span>
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<pre style="margin: 0;">+<span id="LC32" class="line" lang="mosel"> <span class="n" style="color: #333;">manta</span> <span class="p">|</span> <span class="p"><span class="idiff left">|</span></span><span class="idiff right"> </span> <span class="p">|</span> </span>
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<pre style="margin: 0;">+<span id="LC33" class="line" lang="mosel"> <span class="n" style="color: #333;">megahit</span> <span class="p">|</span> <span class="p"><span class="idiff left">|</span></span><span class="idiff right"> </span> <span class="p">|</span> </span>
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<pre style="margin: 0;">+<span id="LC34" class="line" lang="mosel"> <span class="n" style="color: #333;">metabat</span> <span class="p">|</span> <span class="p"><span class="idiff left">|</span></span><span class="idiff right"> </span> <span class="p">|</span> </span>
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<pre style="margin: 0;">+<span id="LC35" class="line" lang="mosel"> <span class="n" style="color: #333;">minia</span> <span class="p">|</span> <span class="n" style="color: #333;">amd64</span><span class="p">,</span><span class="n" style="color: #333;">arm64</span><span class="p">,</span><span class="n" style="color: #333;">ppc64el</span> <span class="p"><span class="idiff left">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">main</span></span><span class="idiff"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">buster</span></span><span class="p"><span class="idiff">,</span></span><span class="n" style="color: #333;"><span class="idiff">bullseye</span></span><span class="p"><span class="idiff">,</span></span><span class="n" style="color: #333;"><span class="idiff right">sid</span></span></span>
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<pre style="margin: 0;">+<span id="LC36" class="line" lang="mosel"> <span class="n" style="color: #333;">minimap2</span> <span class="p">|</span> <span class="n" style="color: #333;">amd64</span><span class="p">,</span><span class="n" style="color: #333;">arm64</span><span class="p">,</span><span class="n" style="color: #333;">ppc64el</span> <span class="p"><span class="idiff left">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">main</span></span><span class="idiff"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">buster</span></span><span class="p"><span class="idiff">,</span></span><span class="n" style="color: #333;"><span class="idiff">bullseye</span></span><span class="p"><span class="idiff">,</span></span><span class="n" style="color: #333;"><span class="idiff right">sid</span></span></span>
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<pre style="margin: 0;">+<span id="LC37" class="line" lang="mosel"> <span class="n" style="color: #333;">multiqc</span> <span class="p">|</span> <span class="n" style="color: #333;">all</span> <span class="p"><span class="idiff left">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">main</span></span><span class="idiff"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">bullseye</span></span><span class="p"><span class="idiff">,</span></span><span class="n" style="color: #333;"><span class="idiff right">sid</span></span></span>
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<pre style="margin: 0;">+<span id="LC38" class="line" lang="mosel"> <span class="n" style="color: #333;">muscle</span> <span class="p">|</span> <span class="n" style="color: #333;">amd64</span><span class="p">,</span><span class="n" style="color: #333;">arm64</span><span class="p">,</span><span class="n" style="color: #333;">ppc64el</span> <span class="p"><span class="idiff left">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">main</span></span><span class="idiff"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">buster</span></span><span class="p"><span class="idiff">,</span></span><span class="n" style="color: #333;"><span class="idiff">bullseye</span></span><span class="p"><span class="idiff">,</span></span><span class="n" style="color: #333;"><span class="idiff right">sid</span></span></span>
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<pre style="margin: 0;">+<span id="LC39" class="line" lang="mosel"> <span class="n" style="color: #333;">nanolyse</span> <span class="p">|</span> <span class="p"><span class="idiff left">|</span></span><span class="idiff right"> </span> <span class="p">|</span> </span>
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<pre style="margin: 0;">+<span id="LC40" class="line" lang="mosel"> <span class="n" style="color: #333;">nanoplot</span> <span class="p">|</span> <span class="p"><span class="idiff left">|</span></span><span class="idiff right"> </span> <span class="p">|</span> </span>
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<pre style="margin: 0;">+<span id="LC41" class="line" lang="mosel"> <span class="n" style="color: #333;">ncbi</span><span class="p">-</span><span class="n" style="color: #333;">blast</span><span class="p">+</span> <span class="p">|</span> <span class="n" style="color: #333;">amd64</span><span class="p">,</span><span class="n" style="color: #333;">arm64</span><span class="p">,</span><span class="n" style="color: #333;">ppc64el</span> <span class="p"><span class="idiff left">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">main</span></span><span class="idiff"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">buster</span></span><span class="p"><span class="idiff">,</span></span><span class="n" style="color: #333;"><span class="idiff">bullseye</span></span><span class="p"><span class="idiff">,</span></span><span class="n" style="color: #333;"><span class="idiff right">sid</span></span></span>
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<pre style="margin: 0;">+<span id="LC42" class="line" lang="mosel"> <span class="n" style="color: #333;">nextflow</span> <span class="p">|</span> <span class="p"><span class="idiff left">|</span></span><span class="idiff right"> </span> <span class="p">|</span> </span>
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<pre style="margin: 0;">+<span id="LC43" class="line" lang="mosel"> <span class="n" style="color: #333;">nf</span><span class="p">-</span><span class="n" style="color: #333;">core</span> <span class="p">|</span> <span class="p"><span class="idiff left">|</span></span><span class="idiff right"> </span> <span class="p">|</span> </span>
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<td class="diff-line-num new new_line" data-linenumber="44" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC44" class="line" lang="mosel"> <span class="n" style="color: #333;">parallel</span><span class="p">-</span><span class="n" style="color: #333;">fastq</span><span class="p">-</span><span class="n" style="color: #333;">dump</span> <span class="p">|</span> <span class="p"><span class="idiff left">|</span></span><span class="idiff right"> </span> <span class="p">|</span> </span>
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<td class="diff-line-num new new_line" data-linenumber="45" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC45" class="line" lang="mosel"> <span class="n" style="color: #333;">picard</span><span class="p">-</span><span class="n" style="color: #333;">tools</span> <span class="p">|</span> <span class="n" style="color: #333;">a<span class="idiff left">md64</span></span><span class="idiff"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">main</span></span><span class="idiff"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">buster</span></span><span class="p"><span class="idiff">,</span></span><span class="n" style="color: #333;"><span class="idiff">bullseye</span></span><span class="p"><span class="idiff">,</span></span><span class="n" style="color: #333;"><span class="idiff right">sid</span></span></span>
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<td class="diff-line-num new new_line" data-linenumber="46" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC46" class="line" lang="mosel"> <span class="n" style="color: #333;">porechop</span> <span class="p">|</span> <span class="n" style="color: #333;">amd64</span><span class="p">,</span><span class="n" style="color: #333;">arm64</span><span class="p">,</span><span class="n" style="color: #333;">ppc64el</span> <span class="p"><span class="idiff left">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">main</span></span><span class="idiff"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">buster</span></span><span class="p"><span class="idiff">,</span></span><span class="n" style="color: #333;"><span class="idiff">bullseye</span></span><span class="p"><span class="idiff">,</span></span><span class="n" style="color: #333;"><span class="idiff right">sid</span></span></span>
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<td class="diff-line-num new new_line" data-linenumber="47" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC47" class="line" lang="mosel"> <span class="n" style="color: #333;">presto</span> <span class="p">|</span> <span class="p"><span class="idiff left">|</span></span><span class="idiff right"> </span> <span class="p">|</span> </span>
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<td class="diff-line-num new new_line" data-linenumber="48" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC48" class="line" lang="mosel"> <span class="n" style="color: #333;">prodigal</span> <span class="p">|</span> <span class="n" style="color: #333;">amd64</span><span class="p">,</span><span class="n" style="color: #333;">arm64</span><span class="p">,</span><span class="n" style="color: #333;">ppc64el</span> <span class="p"><span class="idiff left">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">main</span></span><span class="idiff"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">buster</span></span><span class="p"><span class="idiff">,</span></span><span class="n" style="color: #333;"><span class="idiff">bullseye</span></span><span class="p"><span class="idiff">,</span></span><span class="n" style="color: #333;"><span class="idiff right">sid</span></span></span>
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<td class="diff-line-num new new_line" data-linenumber="49" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC49" class="line" lang="mosel"> <span class="n" style="color: #333;">pycoqc</span> <span class="p">|</span> <span class="n" style="color: #333;">all</span> <span class="p"><span class="idiff left">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">main</span></span><span class="idiff"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff right">sid</span></span></span>
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<pre style="margin: 0;">+<span id="LC50" class="line" lang="mosel"> <span class="n" style="color: #333;">python3</span><span class="p">-</span><span class="n" style="color: #333;">biopython</span> <span class="p">|</span> <span class="n" style="color: #333;">amd64</span><span class="p">,</span><span class="n" style="color: #333;">arm64</span><span class="p">,</span><span class="n" style="color: #333;">ppc64el</span> <span class="p"><span class="idiff left">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">main</span></span><span class="idiff"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">buster</span></span><span class="p"><span class="idiff">,</span></span><span class="n" style="color: #333;"><span class="idiff">bullseye</span></span><span class="p"><span class="idiff">,</span></span><span class="n" style="color: #333;"><span class="idiff right">sid</span></span></span>
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<pre style="margin: 0;">+<span id="LC51" class="line" lang="mosel"> <span class="n" style="color: #333;">python3</span><span class="p">-</span><span class="n" style="color: #333;">deeptools</span> <span class="p">|</span> <span class="n" style="color: #333;">all</span> <span class="p"><span class="idiff left">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">main</span></span><span class="idiff"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">bullseye</span></span><span class="p"><span class="idiff">,</span></span><span class="n" style="color: #333;"><span class="idiff right">sid</span></span></span>
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<pre style="margin: 0;">+<span id="LC52" class="line" lang="mosel"> <span class="n" style="color: #333;">python3</span><span class="p">-</span><span class="n" style="color: #333;">htseq</span> <span class="p">|</span> <span class="n" style="color: #333;">amd64</span><span class="p">,</span><span class="n" style="color: #333;">arm64</span><span class="p">,</span><span class="n" style="color: #333;">ppc64el</span> <span class="p"><span class="idiff left">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">main</span></span><span class="idiff"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">buster</span></span><span class="p"><span class="idiff">,</span></span><span class="n" style="color: #333;"><span class="idiff">bullseye</span></span><span class="p"><span class="idiff">,</span></span><span class="n" style="color: #333;"><span class="idiff right">sid</span></span></span>
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<pre style="margin: 0;">+<span id="LC53" class="line" lang="mosel"> <span class="n" style="color: #333;">python3</span><span class="p">-</span><span class="n" style="color: #333;">numpy</span> <span class="p">|</span> <span class="n" style="color: #333;">amd64</span><span class="p">,</span><span class="n" style="color: #333;">arm64</span><span class="p">,</span><span class="n" style="color: #333;">ppc64el</span> <span class="p"><span class="idiff left">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">main</span></span><span class="idiff"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">buster</span></span><span class="p"><span class="idiff">,</span></span><span class="n" style="color: #333;"><span class="idiff">bullseye</span></span><span class="p"><span class="idiff">,</span></span><span class="n" style="color: #333;"><span class="idiff right">sid</span></span></span>
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<pre style="margin: 0;">+<span id="LC54" class="line" lang="mosel"> <span class="n" style="color: #333;">python3</span><span class="p">-</span><span class="n" style="color: #333;">pandas</span> <span class="p">|</span> <span class="n" style="color: #333;">all</span> <span class="p"><span class="idiff left">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">main</span></span><span class="idiff"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">buster</span></span><span class="p"><span class="idiff">,</span></span><span class="n" style="color: #333;"><span class="idiff">bullseye</span></span><span class="p"><span class="idiff">,</span></span><span class="n" style="color: #333;"><span class="idiff right">sid</span></span></span>
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<pre style="margin: 0;">+<span id="LC55" class="line" lang="mosel"> <span class="n" style="color: #333;">qcat</span> <span class="p">|</span> <span class="n" style="color: #333;">all</span> <span class="p"><span class="idiff left">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">main</span></span><span class="idiff"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">bullseye</span></span><span class="p"><span class="idiff">,</span></span><span class="n" style="color: #333;"><span class="idiff right">sid</span></span></span>
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<pre style="margin: 0;">+<span id="LC56" class="line" lang="mosel"> <span class="n" style="color: #333;">qualimap</span> <span class="p">|</span> <span class="p"><span class="idiff left">|</span></span><span class="idiff right"> </span> <span class="p">|</span> </span>
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<pre style="margin: 0;">+<span id="LC57" class="line" lang="mosel"> <span class="n" style="color: #333;">quast</span> <span class="p">|</span> <span class="p"><span class="idiff left">|</span></span><span class="idiff right"> </span> <span class="p">|</span> </span>
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<pre style="margin: 0;">+<span id="LC58" class="line" lang="mosel"> <span class="n" style="color: #333;">radiant</span> <span class="p">|</span> <span class="n" style="color: #333;">all</span> <span class="p"><span class="idiff left">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">main</span></span><span class="idiff"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">buster</span></span><span class="p"><span class="idiff">,</span></span><span class="n" style="color: #333;"><span class="idiff">bullseye</span></span><span class="p"><span class="idiff">,</span></span><span class="n" style="color: #333;"><span class="idiff right">sid</span></span></span>
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<pre style="margin: 0;">+<span id="LC59" class="line" lang="mosel"> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">bioc</span><span class="p">-</span><span class="n" style="color: #333;">deseq2</span> <span class="p">|</span> <span class="n" style="color: #333;">amd64</span><span class="p">,</span><span class="n" style="color: #333;">arm64</span><span class="p">,</span><span class="n" style="color: #333;">ppc64el</span> <span class="p"><span class="idiff left">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">main</span></span><span class="idiff"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">buster</span></span><span class="p"><span class="idiff">,</span></span><span class="n" style="color: #333;"><span class="idiff">bullseye</span></span><span class="p"><span class="idiff">,</span></span><span class="n" style="color: #333;"><span class="idiff right">sid</span></span></span>
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<pre style="margin: 0;">+<span id="LC60" class="line" lang="mosel"> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">bioc</span><span class="p">-</span><span class="n" style="color: #333;">rtracklayer</span> <span class="p">|</span> <span class="n" style="color: #333;">amd64</span><span class="p">,</span><span class="n" style="color: #333;">arm64</span><span class="p">,</span><span class="n" style="color: #333;">ppc64el</span> <span class="p"><span class="idiff left">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">main</span></span><span class="idiff"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">buster</span></span><span class="p"><span class="idiff">,</span></span><span class="n" style="color: #333;"><span class="idiff">bullseye</span></span><span class="p"><span class="idiff">,</span></span><span class="n" style="color: #333;"><span class="idiff right">sid</span></span></span>
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<pre style="margin: 0;">+<span id="LC61" class="line" lang="mosel"> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">bioc</span><span class="p">-</span><span class="n" style="color: #333;">summarizedexperiment</span> <span class="p">|</span> <span class="n" style="color: #333;">all</span> <span class="p"><span class="idiff left">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">main</span></span><span class="idiff"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">buster</span></span><span class="p"><span class="idiff">,</span></span><span class="n" style="color: #333;"><span class="idiff">bullseye</span></span><span class="p"><span class="idiff">,</span></span><span class="n" style="color: #333;"><span class="idiff right">sid</span></span></span>
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<pre style="margin: 0;">+<span id="LC62" class="line" lang="mosel"> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">bioc</span><span class="p">-</span><span class="n" style="color: #333;">tximport</span> <span class="p">|</span> <span class="n" style="color: #333;">all</span> <span class="p"><span class="idiff left">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">main</span></span><span class="idiff"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">bullseye</span></span><span class="p"><span class="idiff">,</span></span><span class="n" style="color: #333;"><span class="idiff right">sid</span></span></span>
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<pre style="margin: 0;">+<span id="LC63" class="line" lang="mosel"> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">cran</span><span class="p">-</span><span class="n" style="color: #333;">alakazam</span> <span class="p">|</span> <span class="n" style="color: #333;">amd64</span><span class="p">,</span><span class="n" style="color: #333;">arm64</span><span class="p">,</span><span class="n" style="color: #333;">ppc64el</span> <span class="p"><span class="idiff left">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">main</span></span><span class="idiff"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">buster</span></span><span class="p"><span class="idiff">,</span></span><span class="n" style="color: #333;"><span class="idiff">bullseye</span></span><span class="p"><span class="idiff">,</span></span><span class="n" style="color: #333;"><span class="idiff right">sid</span></span></span>
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<pre style="margin: 0;">+<span id="LC64" class="line" lang="mosel"> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">cran</span><span class="p">-</span><span class="n" style="color: #333;">corrplot</span> <span class="p">|</span> <span class="n" style="color: #333;">all</span> <span class="p"><span class="idiff left">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">main</span></span><span class="idiff"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">bullseye</span></span><span class="p"><span class="idiff">,</span></span><span class="n" style="color: #333;"><span class="idiff right">sid</span></span></span>
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<pre style="margin: 0;">+<span id="LC65" class="line" lang="mosel"> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">cran</span><span class="p">-</span><span class="n" style="color: #333;">crosstalk</span> <span class="p">|</span> <span class="n" style="color: #333;">all</span> <span class="p"><span class="idiff left">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">main</span></span><span class="idiff"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">buster</span></span><span class="p"><span class="idiff">,</span></span><span class="n" style="color: #333;"><span class="idiff">bullseye</span></span><span class="p"><span class="idiff">,</span></span><span class="n" style="color: #333;"><span class="idiff right">sid</span></span></span>
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<pre style="margin: 0;">+<span id="LC66" class="line" lang="mosel"> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">cran</span><span class="p">-</span><span class="n" style="color: #333;">data</span><span class="p">.</span><span class="n" style="color: #333;">table</span> <span class="p">|</span> <span class="n" style="color: #333;">amd64</span><span class="p">,</span><span class="n" style="color: #333;">arm64</span><span class="p">,</span><span class="n" style="color: #333;">ppc64el</span> <span class="p"><span class="idiff left">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">main</span></span><span class="idiff"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">buster</span></span><span class="p"><span class="idiff">,</span></span><span class="n" style="color: #333;"><span class="idiff">bullseye</span></span><span class="p"><span class="idiff">,</span></span><span class="n" style="color: #333;"><span class="idiff right">sid</span></span></span>
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<pre style="margin: 0;">+<span id="LC67" class="line" lang="mosel"> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">cran</span><span class="p">-</span><span class="n" style="color: #333;">dt</span> <span class="p">|</span> <span class="n" style="color: #333;">all</span> <span class="p"><span class="idiff left">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">main</span></span><span class="idiff"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">buster</span></span><span class="p"><span class="idiff">,</span></span><span class="n" style="color: #333;"><span class="idiff">bullseye</span></span><span class="p"><span class="idiff">,</span></span><span class="n" style="color: #333;"><span class="idiff right">sid</span></span></span>
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68
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<pre style="margin: 0;">+<span id="LC68" class="line" lang="mosel"> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">cran</span><span class="p">-</span><span class="n" style="color: #333;">ggplot2</span> <span class="p">|</span> <span class="n" style="color: #333;">all</span> <span class="p"><span class="idiff left">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">main</span></span><span class="idiff"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">buster</span></span><span class="p"><span class="idiff">,</span></span><span class="n" style="color: #333;"><span class="idiff">bullseye</span></span><span class="p"><span class="idiff">,</span></span><span class="n" style="color: #333;"><span class="idiff right">sid</span></span></span>
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69
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<pre style="margin: 0;">+<span id="LC69" class="line" lang="mosel"> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">cran</span><span class="p">-</span><span class="n" style="color: #333;">ggrepel</span> <span class="p">|</span> <span class="n" style="color: #333;">amd64</span><span class="p">,</span><span class="n" style="color: #333;">arm64</span><span class="p">,</span><span class="n" style="color: #333;">ppc64el</span> <span class="p"><span class="idiff left">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">main</span></span><span class="idiff"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">bullseye</span></span><span class="p"><span class="idiff">,</span></span><span class="n" style="color: #333;"><span class="idiff right">sid</span></span></span>
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70
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<pre style="margin: 0;">+<span id="LC70" class="line" lang="mosel"> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">cran</span><span class="p">-</span><span class="n" style="color: #333;">gprofiler</span> <span class="p">|</span> <span class="n" style="color: #333;">all</span> <span class="p"><span class="idiff left">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">main</span></span><span class="idiff"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">bullseye</span></span><span class="p"><span class="idiff">,</span></span><span class="n" style="color: #333;"><span class="idiff right">sid</span></span></span>
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71
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<pre style="margin: 0;">+<span id="LC71" class="line" lang="mosel"> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">cran</span><span class="p">-</span><span class="n" style="color: #333;">locfit</span> <span class="p">|</span> <span class="n" style="color: #333;">amd64</span><span class="p">,</span><span class="n" style="color: #333;">arm64</span><span class="p">,</span><span class="n" style="color: #333;">ppc64el</span> <span class="p"><span class="idiff left">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">main</span></span><span class="idiff"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">bullseye</span></span><span class="p"><span class="idiff">,</span></span><span class="n" style="color: #333;"><span class="idiff right">sid</span></span></span>
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72
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<pre style="margin: 0;">+<span id="LC72" class="line" lang="mosel"> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">cran</span><span class="p">-</span><span class="n" style="color: #333;">pheatmap</span> <span class="p">|</span> <span class="n" style="color: #333;">all</span> <span class="p"><span class="idiff left">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">main</span></span><span class="idiff"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">buster</span></span><span class="p"><span class="idiff">,</span></span><span class="n" style="color: #333;"><span class="idiff">bullseye</span></span><span class="p"><span class="idiff">,</span></span><span class="n" style="color: #333;"><span class="idiff right">sid</span></span></span>
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73
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<pre style="margin: 0;">+<span id="LC73" class="line" lang="mosel"> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">cran</span><span class="p">-</span><span class="n" style="color: #333;">plotly</span> <span class="p">|</span> <span class="n" style="color: #333;">all</span> <span class="p"><span class="idiff left">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">main</span></span><span class="idiff"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">buster</span></span><span class="p"><span class="idiff">,</span></span><span class="n" style="color: #333;"><span class="idiff">bullseye</span></span><span class="p"><span class="idiff">,</span></span><span class="n" style="color: #333;"><span class="idiff right">sid</span></span></span>
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74
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<pre style="margin: 0;">+<span id="LC74" class="line" lang="mosel"> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">cran</span><span class="p">-</span><span class="n" style="color: #333;">reshape2</span> <span class="p">|</span> <span class="n" style="color: #333;">a<span class="idiff left">md64</span></span><span class="p"><span class="idiff">,</span></span><span class="n" style="color: #333;"><span class="idiff">arm64</span></span><span class="p"><span class="idiff">,</span></span><span class="n" style="color: #333;"><span class="idiff">ppc64el</span></span><span class="idiff"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">main</span></span><span class="idiff"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">buster</span></span><span class="p"><span class="idiff">,</span></span><span class="n" style="color: #333;"><span class="idiff">bullseye</span></span><span class="p"><span class="idiff">,</span></span><span class="n" style="color: #333;"><span class="idiff right">sid</span></span></span>
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75
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<pre style="margin: 0;">+<span id="LC75" class="line" lang="mosel"> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">cran</span><span class="p">-</span><span class="n" style="color: #333;">rjson</span> <span class="p">|</span> <span class="n" style="color: #333;">amd64</span><span class="p">,</span><span class="n" style="color: #333;">arm64</span><span class="p">,</span><span class="n" style="color: #333;">ppc64el</span> <span class="p"><span class="idiff left">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">main</span></span><span class="idiff"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">buster</span></span><span class="p"><span class="idiff">,</span></span><span class="n" style="color: #333;"><span class="idiff">bullseye</span></span><span class="p"><span class="idiff">,</span></span><span class="n" style="color: #333;"><span class="idiff right">sid</span></span></span>
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76
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<pre style="margin: 0;">+<span id="LC76" class="line" lang="mosel"> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">cran</span><span class="p">-</span><span class="n" style="color: #333;">rlang</span> <span class="p">|</span> <span class="n" style="color: #333;">amd64</span><span class="p">,</span><span class="n" style="color: #333;">arm64</span><span class="p">,</span><span class="n" style="color: #333;">ppc64el</span> <span class="p"><span class="idiff left">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">main</span></span><span class="idiff"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">buster</span></span><span class="p"><span class="idiff">,</span></span><span class="n" style="color: #333;"><span class="idiff">bullseye</span></span><span class="p"><span class="idiff">,</span></span><span class="n" style="color: #333;"><span class="idiff right">sid</span></span></span>
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<pre style="margin: 0;">+<span id="LC77" class="line" lang="mosel"> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">cran</span><span class="p">-</span><span class="n" style="color: #333;">rmarkdown</span> <span class="p">|</span> <span class="n" style="color: #333;">all</span> <span class="p"><span class="idiff left">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">main</span></span><span class="idiff"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">buster</span></span><span class="p"><span class="idiff">,</span></span><span class="n" style="color: #333;"><span class="idiff">bullseye</span></span><span class="p"><span class="idiff">,</span></span><span class="n" style="color: #333;"><span class="idiff right">sid</span></span></span>
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78
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<pre style="margin: 0;">+<span id="LC78" class="line" lang="mosel"> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">cran</span><span class="p">-</span><span class="n" style="color: #333;">scales</span> <span class="p">|</span> <span class="n" style="color: #333;">all</span><span class="idiff left"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">main</span></span><span class="idiff"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">buster</span></span><span class="p"><span class="idiff">,</span></span><span class="n" style="color: #333;"><span class="idiff">bullseye</span></span><span class="p"><span class="idiff">,</span></span><span class="n" style="color: #333;"><span class="idiff right">sid</span></span></span>
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79
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<pre style="margin: 0;">+<span id="LC79" class="line" lang="mosel"> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">cran</span><span class="p">-</span><span class="n" style="color: #333;">shazam</span> <span class="p">|</span> <span class="n" style="color: #333;">all</span> <span class="p"><span class="idiff left">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">main</span></span><span class="idiff"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">buster</span></span><span class="p"><span class="idiff">,</span></span><span class="n" style="color: #333;"><span class="idiff">bullseye</span></span><span class="p"><span class="idiff">,</span></span><span class="n" style="color: #333;"><span class="idiff right">sid</span></span></span>
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80
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<pre style="margin: 0;">+<span id="LC80" class="line" lang="mosel"> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">cran</span><span class="p">-</span><span class="n" style="color: #333;">tigger</span> <span class="p">|</span> <span class="n" style="color: #333;">all</span> <span class="p"><span class="idiff left">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">main</span></span><span class="idiff"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">buster</span></span><span class="p"><span class="idiff">,</span></span><span class="n" style="color: #333;"><span class="idiff">bullseye</span></span><span class="p"><span class="idiff">,</span></span><span class="n" style="color: #333;"><span class="idiff right">sid</span></span></span>
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<td class="diff-line-num new new_line" data-linenumber="81" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
81
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<pre style="margin: 0;">+<span id="LC81" class="line" lang="mosel"> <span class="n" style="color: #333;">rna</span><span class="p">-</span><span class="n" style="color: #333;">star</span> <span class="p">|</span> <span class="n" style="color: #333;">amd64</span><span class="p">,</span><span class="n" style="color: #333;">arm64</span><span class="p">,</span><span class="n" style="color: #333;">ppc64el</span> <span class="p"><span class="idiff left">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">main</span></span><span class="idiff"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">buster</span></span><span class="p"><span class="idiff">,</span></span><span class="n" style="color: #333;"><span class="idiff">bullseye</span></span><span class="p"><span class="idiff">,</span></span><span class="n" style="color: #333;"><span class="idiff right">sid</span></span></span>
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<td class="diff-line-num new new_line" data-linenumber="82" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
82
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<pre style="margin: 0;">+<span id="LC82" class="line" lang="mosel"> <span class="n" style="color: #333;">salmon</span> <span class="p">|</span> <span class="n" style="color: #333;">amd64</span> <span class="p"><span class="idiff left">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">main</span></span><span class="idiff"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">buster</span></span><span class="p"><span class="idiff">,</span></span><span class="n" style="color: #333;"><span class="idiff">bullseye</span></span><span class="p"><span class="idiff">,</span></span><span class="n" style="color: #333;"><span class="idiff right">sid</span></span></span>
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<td class="diff-line-num new new_line" data-linenumber="83" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
83
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<pre style="margin: 0;">+<span id="LC83" class="line" lang="mosel"> <span class="n" style="color: #333;">samtools</span> <span class="p">|</span> <span class="n" style="color: #333;">amd64</span><span class="p">,</span><span class="n" style="color: #333;">arm64</span><span class="p">,</span><span class="n" style="color: #333;">ppc64el</span> <span class="p"><span class="idiff left">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">main</span></span><span class="idiff"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">buster</span></span><span class="p"><span class="idiff">,</span></span><span class="n" style="color: #333;"><span class="idiff">bullseye</span></span><span class="p"><span class="idiff">,</span></span><span class="n" style="color: #333;"><span class="idiff right">sid</span></span></span>
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84
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<pre style="margin: 0;">+<span id="LC84" class="line" lang="mosel"> <span class="n" style="color: #333;">snakemake</span> <span class="p">|</span> <span class="n" style="color: #333;">all</span> <span class="p"><span class="idiff left">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">main</span></span><span class="idiff"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">buster</span></span><span class="p"><span class="idiff">,</span></span><span class="n" style="color: #333;"><span class="idiff">bullseye</span></span><span class="p"><span class="idiff">,</span></span><span class="n" style="color: #333;"><span class="idiff right">sid</span></span></span>
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<pre style="margin: 0;">+<span id="LC85" class="line" lang="mosel"> <span class="n" style="color: #333;">snpeff</span> <span class="p">|</span> <span class="p"><span class="idiff left">|</span></span><span class="idiff right"> </span> <span class="p">|</span> </span>
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86
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<pre style="margin: 0;">+<span id="LC86" class="line" lang="mosel"> <span class="n" style="color: #333;">snpsift</span> <span class="p">|</span> <span class="p"><span class="idiff left">|</span></span><span class="idiff right"> </span> <span class="p">|</span> </span>
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<td class="diff-line-num new new_line" data-linenumber="87" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
87
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<pre style="margin: 0;">+<span id="LC87" class="line" lang="mosel"> <span class="n" style="color: #333;">spades</span> <span class="p">|</span> <span class="n" style="color: #333;">amd64</span> <span class="p"><span class="idiff left">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">main</span></span><span class="idiff"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">buster</span></span><span class="p"><span class="idiff">,</span></span><span class="n" style="color: #333;"><span class="idiff">bullseye</span></span><span class="p"><span class="idiff">,</span></span><span class="n" style="color: #333;"><span class="idiff right">sid</span></span></span>
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<td class="diff-line-num new new_line" data-linenumber="88" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
88
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<pre style="margin: 0;">+<span id="LC88" class="line" lang="mosel"> <span class="n" style="color: #333;">sra</span><span class="p">-</span><span class="n" style="color: #333;">toolkit</span> <span class="p">|</span> <span class="n" style="color: #333;">amd64</span> <span class="p"><span class="idiff left">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">main</span></span><span class="idiff"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">buster</span></span><span class="p"><span class="idiff">,</span></span><span class="n" style="color: #333;"><span class="idiff">bullseye</span></span><span class="p"><span class="idiff">,</span></span><span class="n" style="color: #333;"><span class="idiff right">sid</span></span></span>
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89
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<pre style="margin: 0;">+<span id="LC89" class="line" lang="mosel"> <span class="n" style="color: #333;">strelka</span> <span class="p">|</span> <span class="p"><span class="idiff left">|</span></span><span class="idiff right"> </span> <span class="p">|</span> </span>
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90
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<pre style="margin: 0;">+<span id="LC90" class="line" lang="mosel"> <span class="n" style="color: #333;">tiddit</span> <span class="p">|</span> <span class="p"><span class="idiff left">|</span></span><span class="idiff right"> </span> <span class="p">|</span> </span>
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<td class="diff-line-num new new_line" data-linenumber="91" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
91
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<pre style="margin: 0;">+<span id="LC91" class="line" lang="mosel"> <span class="nf" style="color: #900; font-weight: 600;">trim</span><span class="p">-</span><span class="n" style="color: #333;">galore</span> <span class="p">|</span> <span class="n" style="color: #333;">all</span> <span class="p"><span class="idiff left">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">main</span></span><span class="idiff"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">bullseye</span></span><span class="p"><span class="idiff">,</span></span><span class="n" style="color: #333;"><span class="idiff right">sid</span></span></span>
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92
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<pre style="margin: 0;">+<span id="LC92" class="line" lang="mosel"> <span class="n" style="color: #333;">unicycler</span> <span class="p">|</span> <span class="n" style="color: #333;">amd64</span> <span class="p"><span class="idiff left">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">main</span></span><span class="idiff"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">buster</span></span><span class="p"><span class="idiff">,</span></span><span class="n" style="color: #333;"><span class="idiff">bullseye</span></span><span class="p"><span class="idiff">,</span></span><span class="n" style="color: #333;"><span class="idiff right">sid</span></span></span>
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<pre style="margin: 0;">+<span id="LC93" class="line" lang="mosel"> <span class="n" style="color: #333;">varscan</span> <span class="p">|</span> <span class="n" style="color: #333;">amd64</span> <span class="p"><span class="idiff left">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">non</span></span><span class="p"><span class="idiff">-</span></span><span class="n" style="color: #333;"><span class="idiff">free</span></span><span class="idiff"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">buster</span></span><span class="p"><span class="idiff">,</span></span><span class="n" style="color: #333;"><span class="idiff">bullseye</span></span><span class="p"><span class="idiff">,</span></span><span class="n" style="color: #333;"><span class="idiff right">sid</span></span></span>
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<td class="diff-line-num new new_line" data-linenumber="94" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC94" class="line" lang="mosel"> <span class="n" style="color: #333;">vcftools</span> <span class="p">|</span> <span class="n" style="color: #333;">amd64</span><span class="p">,</span><span class="n" style="color: #333;">arm64</span><span class="p">,</span><span class="n" style="color: #333;">ppc64el</span> <span class="p"><span class="idiff left">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">main</span></span><span class="idiff"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">buster</span></span><span class="p"><span class="idiff">,</span></span><span class="n" style="color: #333;"><span class="idiff">bullseye</span></span><span class="p"><span class="idiff">,</span></span><span class="n" style="color: #333;"><span class="idiff right">sid</span></span></span>
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<td class="diff-line-num new new_line" data-linenumber="95" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC95" class="line" lang="mosel"> <span class="n" style="color: #333;">vep</span> <span class="p">|</span> <span class="p"><span class="idiff left">|</span></span><span class="idiff right"> </span> <span class="p">|</span> </span>
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<td class="diff-line-num new new_line" data-linenumber="96" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC96" class="line" lang="mosel"> <span class="n" style="color: #333;">vg</span> <span class="p">|</span> <span class="n" style="color: #333;">amd64</span> <span class="p"><span class="idiff left">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">main</span></span><span class="idiff"> </span><span class="p"><span class="idiff">|</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">bullseye</span></span><span class="p"><span class="idiff">,</span></span><span class="n" style="color: #333;"><span class="idiff right">sid</span></span></span>
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97
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97
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<pre style="margin: 0;"> <span id="LC97" class="line" lang="mosel"><span class="p">(</span><span class="m" style="color: #099;">92</span> <span class="n" style="color: #333;">Zeilen</span><span class="p">)</span></span>
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<pre style="margin: 0;"> <span id="LC98" class="line" lang="mosel"></span></pre>
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