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<h3>
Andreas Tille pushed to branch master
at <a href="https://salsa.debian.org/blends-team/med">Debian Blends Team / med</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/blends-team/med/-/commit/294bac0c115faf5487cd8c452d9771280ae51322">294bac0c</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-05-12T13:45:48+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Update query data
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/blends-team/med/-/commit/4c338778b16867f152e91f1f2039a2723ce208f9">4c338778</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-05-13T12:03:27+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Nanolyse and graphmap2 are injected into Salsa
</pre>
</li>
</ul>
<h4>2 changed files:</h4>
<ul>
<li class="file-stats">
<a href="#6d072c2122e74d0aa0bfeb56f2e3fd56014c34b6">
covid-19_doc/bio_covid-19_dependencies_result
</a>
</li>
<li class="file-stats">
<a href="#2f3a29085b215ab5e23031c8099b8fde971b80f0">
tasks/covid-19
</a>
</li>
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<h4>Changes:</h4>
<li id="6d072c2122e74d0aa0bfeb56f2e3fd56014c34b6">
<a href="https://salsa.debian.org/blends-team/med/-/compare/154220e95faa271e96979606f50d1cdb0a4c63cd...4c338778b16867f152e91f1f2039a2723ce208f9#6d072c2122e74d0aa0bfeb56f2e3fd56014c34b6"><strong>covid-19_doc/bio_covid-19_dependencies_result</strong></a>
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<pre style="margin: 0;">-<span id="LC1" class="line" lang="mosel"><span class="n" style="color: #333;">Last</span><span class="p">-</span><span class="n" style="color: #333;">Update</span><span class="p">:</span> <span class="n" style="color: #333;">Tue</span><span class="p">,</span> <span class="m" style="color: #099;">12</span> <span class="n" style="color: #333;">May</span> <span class="m" style="color: #099;">2020</span> <span class="m" style="color: #099;">1<span class="idiff left">0</span></span><span class="p"><span class="idiff">:</span></span><span class="m" style="color: #099;"><span class="idiff">50</span></span><span class="p"><span class="idiff">:</span></span><span class="m" style="color: #099;"><span class="idiff">33</span></span><span class="idiff"> </span><span class="p"><span class="idiff">+</span></span><span class="m" style="color: #099;"><span class="idiff right">02</span>00</span></span>
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1
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="mosel"><span class="n" style="color: #333;">Last</span><span class="p">-</span><span class="n" style="color: #333;">Update</span><span class="p">:</span> <span class="n" style="color: #333;">Tue</span><span class="p">,</span> <span class="m" style="color: #099;">12</span> <span class="n" style="color: #333;">May</span> <span class="m" style="color: #099;">2020</span> <span class="m" style="color: #099;">1<span class="idiff left">1</span></span><span class="p"><span class="idiff">:</span></span><span class="m" style="color: #099;"><span class="idiff">43</span></span><span class="p"><span class="idiff">:</span></span><span class="m" style="color: #099;"><span class="idiff">23</span></span><span class="idiff"> </span><span class="p"><span class="idiff">+</span></span><span class="m" style="color: #099;"><span class="idiff right">00</span>00</span></span>
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2
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<pre style="margin: 0;"> <span id="LC2" class="line" lang="mosel"></span>
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3
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<td class="diff-line-num new_line" data-linenumber="3" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
3
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<pre style="margin: 0;"> <span id="LC3" class="line" lang="mosel"> <span class="k" style="font-weight: 600;">package</span> <span class="p">|</span> <span class="n" style="color: #333;">architectures</span> <span class="p">|</span> <span class="n" style="color: #333;">section</span> <span class="p">|</span> <span class="n" style="color: #333;">releases</span> <span class="p">|</span> <span class="n" style="color: #333;">conda</span> <span class="p">|</span> <span class="n" style="color: #333;">bio</span><span class="p">.</span><span class="n" style="color: #333;">tools</span> </span>
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4
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<td class="diff-line-num new_line" data-linenumber="4" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
4
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<pre style="margin: 0;"> <span id="LC4" class="line" lang="mosel"><span class="p">-----------------------------+---------------------+----------+---------------------------------------------+--------------------------+--------------</span></span>
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5
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<td class="diff-line-num new_line" data-linenumber="5" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
5
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<pre style="margin: 0;"> <span id="LC5" class="line" lang="mosel"> <span class="n" style="color: #333;">abacas</span> <span class="p">|</span> <span class="n" style="color: #333;">all</span> <span class="p">|</span> <span class="n" style="color: #333;">main</span> <span class="p">|</span> <span class="n" style="color: #333;">buster</span><span class="p">,</span><span class="n" style="color: #333;">bullseye</span><span class="p">,</span><span class="n" style="color: #333;">sid</span> <span class="p">|</span> <span class="p">|</span> </span>
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6
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<td class="diff-line-num new_line" data-linenumber="6" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
6
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<pre style="margin: 0;"> <span id="LC6" class="line" lang="mosel"> <span class="n" style="color: #333;">allelecount</span> <span class="p">|</span> <span class="p">|</span> <span class="p">|</span> <span class="p">|</span> <span class="p">|</span> </span>
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7
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<td class="diff-line-num new_line old" data-linenumber="7" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC7" class="line" lang="mosel"> <span class="n" style="color: #333;">ascat</span> <span class="p">|</span> <span class="p">|</span> <span class="p">|</span> <span class="p">|</span> <span class="p">|</span> </span>
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8
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<td class="diff-line-num new_line" data-linenumber="7" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
7
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<pre style="margin: 0;"> <span id="LC7" class="line" lang="mosel"> <span class="n" style="color: #333;">bcftools</span> <span class="p">|</span> <span class="n" style="color: #333;">amd64</span><span class="p">,</span><span class="n" style="color: #333;">arm64</span><span class="p">,</span><span class="n" style="color: #333;">ppc64el</span> <span class="p">|</span> <span class="n" style="color: #333;">main</span> <span class="p">|</span> <span class="n" style="color: #333;">buster</span><span class="p">,</span><span class="n" style="color: #333;">bullseye</span><span class="p">,</span><span class="n" style="color: #333;">sid</span> <span class="p">|</span> <span class="n" style="color: #333;">bcftools</span> <span class="p">|</span> <span class="n" style="color: #333;">bcftools</span></span>
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<td class="diff-line-num new_line" data-linenumber="8" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
8
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<pre style="margin: 0;"> <span id="LC8" class="line" lang="mosel"> <span class="n" style="color: #333;">bedtools</span> <span class="p">|</span> <span class="n" style="color: #333;">amd64</span><span class="p">,</span><span class="n" style="color: #333;">arm64</span><span class="p">,</span><span class="n" style="color: #333;">ppc64el</span> <span class="p">|</span> <span class="n" style="color: #333;">main</span> <span class="p">|</span> <span class="n" style="color: #333;">buster</span><span class="p">,</span><span class="n" style="color: #333;">bullseye</span><span class="p">,</span><span class="n" style="color: #333;">sid</span> <span class="p">|</span> <span class="n" style="color: #333;">biotools</span> <span class="p">|</span> <span class="n" style="color: #333;">bedtools</span></span>
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<td class="diff-line-num old_line" data-linenumber="10" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
10
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<td class="diff-line-num new_line" data-linenumber="9" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
9
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<pre style="margin: 0;"> <span id="LC9" class="line" lang="mosel"> <span class="n" style="color: #333;">bio</span><span class="p">-</span><span class="n" style="color: #333;">guppy</span> <span class="p">|</span> <span class="p">|</span> <span class="p">|</span> <span class="p">|</span> <span class="p">|</span> </span>
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<td class="diff-line-num old_line" data-linenumber="11" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
11
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<td class="diff-line-num new_line" data-linenumber="10" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
10
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<pre style="margin: 0;"> <span id="LC10" class="line" lang="mosel"> <span class="n" style="color: #333;">bowtie2</span> <span class="p">|</span> <span class="n" style="color: #333;">amd64</span><span class="p">,</span><span class="n" style="color: #333;">arm64</span><span class="p">,</span><span class="n" style="color: #333;">ppc64el</span> <span class="p">|</span> <span class="n" style="color: #333;">main</span> <span class="p">|</span> <span class="n" style="color: #333;">buster</span><span class="p">,</span><span class="n" style="color: #333;">bullseye</span><span class="p">,</span><span class="n" style="color: #333;">sid</span> <span class="p">|</span> <span class="n" style="color: #333;">bowtie2</span> <span class="p">|</span> <span class="n" style="color: #333;">bowtie2</span></span>
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11
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<pre style="margin: 0;"> <span id="LC11" class="line" lang="mosel"> <span class="n" style="color: #333;">busco</span> <span class="p">|</span> <span class="p">|</span> <span class="p">|</span> <span class="p">|</span> <span class="p">|</span> </span>
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<pre style="margin: 0;">-<span id="LC13" class="line" lang="mosel"> <span class="n" style="color: #333;">bustools</span> <span class="p">|</span> <span class="n" style="color: #333;">amd64</span><span class="idiff left right"> </span> <span class="p">|</span> <span class="n" style="color: #333;">main</span> <span class="p">|</span> <span class="n" style="color: #333;">bullseye</span><span class="p">,</span><span class="n" style="color: #333;">sid</span> <span class="p">|</span> <span class="n" style="color: #333;">bustools</span> <span class="p">|</span> <span class="n" style="color: #333;">BUStools</span></span>
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<td class="diff-line-num new new_line" data-linenumber="12" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC12" class="line" lang="mosel"> <span class="n" style="color: #333;">bustools</span> <span class="p">|</span> <span class="n" style="color: #333;">amd64</span><span class="p"><span class="idiff left">,</span></span><span class="n" style="color: #333;"><span class="idiff">arm64</span></span><span class="p"><span class="idiff">,</span></span><span class="n" style="color: #333;"><span class="idiff right">ppc64el</span></span> <span class="p">|</span> <span class="n" style="color: #333;">main</span> <span class="p">|</span> <span class="n" style="color: #333;">bullseye</span><span class="p">,</span><span class="n" style="color: #333;">sid</span> <span class="p">|</span> <span class="n" style="color: #333;">bustools</span> <span class="p">|</span> <span class="n" style="color: #333;">BUStools</span></span>
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14
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<td class="diff-line-num new_line" data-linenumber="13" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC13" class="line" lang="mosel"> <span class="n" style="color: #333;">bwa</span> <span class="p">|</span> <span class="n" style="color: #333;">amd64</span><span class="p">,</span><span class="n" style="color: #333;">arm64</span><span class="p">,</span><span class="n" style="color: #333;">ppc64el</span> <span class="p">|</span> <span class="n" style="color: #333;">main</span> <span class="p">|</span> <span class="n" style="color: #333;">buster</span><span class="p">,</span><span class="n" style="color: #333;">bullseye</span><span class="p">,</span><span class="n" style="color: #333;">sid</span> <span class="p">|</span> <span class="n" style="color: #333;">bwa</span> <span class="p">|</span> <span class="n" style="color: #333;">BWA</span></span>
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15
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<td class="diff-line-num new_line" data-linenumber="14" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
14
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<pre style="margin: 0;"> <span id="LC14" class="line" lang="mosel"> <span class="n" style="color: #333;">cat</span> <span class="p">|</span> <span class="p">|</span> <span class="p">|</span> <span class="p">|</span> <span class="p">|</span> </span>
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<td class="diff-line-num old_line" data-linenumber="16" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
16
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<td class="diff-line-num new_line" data-linenumber="15" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
15
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<pre style="margin: 0;"> <span id="LC15" class="line" lang="mosel"> <span class="n" style="color: #333;">centrifuge</span> <span class="p">|</span> <span class="n" style="color: #333;">amd64</span> <span class="p">|</span> <span class="n" style="color: #333;">main</span> <span class="p">|</span> <span class="n" style="color: #333;">buster</span><span class="p">,</span><span class="n" style="color: #333;">bullseye</span><span class="p">,</span><span class="n" style="color: #333;">sid</span> <span class="p">|</span> <span class="n" style="color: #333;">centrifuge</span> <span class="p">|</span> <span class="n" style="color: #333;">Centrifuge</span></span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="30" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="29" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -30,7 +29,7 @@ Last-Update: Tue, 12 May 2020 10:50:33 +0200</td>
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30
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<td class="diff-line-num new_line" data-linenumber="29" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
29
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<pre style="margin: 0;"> <span id="LC29" class="line" lang="mosel"> <span class="n" style="color: #333;">libhts</span><span class="p">-</span><span class="n" style="color: #333;">dev</span> <span class="p">|</span> <span class="n" style="color: #333;">amd64</span><span class="p">,</span><span class="n" style="color: #333;">arm64</span><span class="p">,</span><span class="n" style="color: #333;">ppc64el</span> <span class="p">|</span> <span class="n" style="color: #333;">main</span> <span class="p">|</span> <span class="n" style="color: #333;">buster</span><span class="p">,</span><span class="n" style="color: #333;">bullseye</span><span class="p">,</span><span class="n" style="color: #333;">sid</span> <span class="p">|</span> <span class="n" style="color: #333;">htslib</span> <span class="p">|</span> </span>
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31
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30
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<pre style="margin: 0;"> <span id="LC30" class="line" lang="mosel"> <span class="n" style="color: #333;">lumpy</span> <span class="p">|</span> <span class="p">|</span> <span class="p">|</span> <span class="p">|</span> <span class="p">|</span> </span>
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32
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<td class="diff-line-num new_line" data-linenumber="31" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
31
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<pre style="margin: 0;"> <span id="LC31" class="line" lang="mosel"> <span class="n" style="color: #333;">manta</span> <span class="p">|</span> <span class="p">|</span> <span class="p">|</span> <span class="n" style="color: #333;">https</span><span class="p">://</span><span class="n" style="color: #333;">salsa</span><span class="p">.</span><span class="n" style="color: #333;">debian</span><span class="p">.</span><span class="n" style="color: #333;">org</span><span class="p">/</span><span class="n" style="color: #333;">med</span><span class="p">-</span><span class="n" style="color: #333;">team</span><span class="p">/</span><span class="n" style="color: #333;">manta</span> <span class="p">|</span> <span class="p">|</span> </span>
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33
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<pre style="margin: 0;">-<span id="LC33" class="line" lang="mosel"> <span class="n" style="color: #333;">megahit</span> <span class="p">|</span> <span class="p">|</span> <span class="p">|</span> <span class="n" style="color: #333;"><span class="idiff left">https</span></span><span class="p"><span class="idiff">://</span></span><span class="n" style="color: #333;"><span class="idiff">salsa</span></span><span class="p"><span class="idiff">.</span></span><span class="n" style="color: #333;"><span class="idiff">debian</span></span><span class="p"><span class="idiff">.</span></span><span class="n" style="color: #333;"><span class="idiff">org</span></span><span class="p"><span class="idiff">/</span></span><span class="n" style="color: #333;"><span class="idiff">med</span></span><span class="p"><span class="idiff">-</span></span><span class="n" style="color: #333;"><span class="idiff">team</span></span><span class="p"><span class="idiff">/</span></span><span class="n" style="color: #333;"><span class="idiff right">megahit</span></span> <span class="p">|</span> <span class="p">|</span> </span>
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32
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<pre style="margin: 0;">+<span id="LC32" class="line" lang="mosel"> <span class="n" style="color: #333;">megahit</span> <span class="p">|</span> <span class="p">|</span> <span class="p">|</span> <span class="n" style="color: #333;"><span class="idiff left">new</span></span><span class="idiff right"> </span> <span class="p">|</span> <span class="p">|</span> </span>
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34
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<pre style="margin: 0;"> <span id="LC33" class="line" lang="mosel"> <span class="n" style="color: #333;">metabat</span> <span class="p">|</span> <span class="p">|</span> <span class="p">|</span> <span class="p">|</span> <span class="p">|</span> </span>
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<td class="diff-line-num old_line" data-linenumber="35" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
35
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<td class="diff-line-num new_line" data-linenumber="34" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
34
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<pre style="margin: 0;"> <span id="LC34" class="line" lang="mosel"> <span class="n" style="color: #333;">minia</span> <span class="p">|</span> <span class="n" style="color: #333;">amd64</span><span class="p">,</span><span class="n" style="color: #333;">arm64</span><span class="p">,</span><span class="n" style="color: #333;">ppc64el</span> <span class="p">|</span> <span class="n" style="color: #333;">main</span> <span class="p">|</span> <span class="n" style="color: #333;">buster</span><span class="p">,</span><span class="n" style="color: #333;">bullseye</span><span class="p">,</span><span class="n" style="color: #333;">sid</span> <span class="p">|</span> <span class="p">|</span> <span class="n" style="color: #333;">minia</span></span>
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<td class="diff-line-num old_line" data-linenumber="36" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
36
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<td class="diff-line-num new_line" data-linenumber="35" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
35
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<pre style="margin: 0;"> <span id="LC35" class="line" lang="mosel"> <span class="n" style="color: #333;">minimap2</span> <span class="p">|</span> <span class="n" style="color: #333;">amd64</span><span class="p">,</span><span class="n" style="color: #333;">arm64</span><span class="p">,</span><span class="n" style="color: #333;">ppc64el</span> <span class="p">|</span> <span class="n" style="color: #333;">main</span> <span class="p">|</span> <span class="n" style="color: #333;">buster</span><span class="p">,</span><span class="n" style="color: #333;">bullseye</span><span class="p">,</span><span class="n" style="color: #333;">sid</span> <span class="p">|</span> <span class="n" style="color: #333;">minimap2</span> <span class="p">|</span> </span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="46" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="45" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -46,7 +45,7 @@ Last-Update: Tue, 12 May 2020 10:50:33 +0200</td>
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<td class="diff-line-num old_line" data-linenumber="46" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
46
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<td class="diff-line-num new_line" data-linenumber="45" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
45
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<pre style="margin: 0;"> <span id="LC45" class="line" lang="mosel"> <span class="n" style="color: #333;">porechop</span> <span class="p">|</span> <span class="n" style="color: #333;">amd64</span><span class="p">,</span><span class="n" style="color: #333;">arm64</span><span class="p">,</span><span class="n" style="color: #333;">ppc64el</span> <span class="p">|</span> <span class="n" style="color: #333;">main</span> <span class="p">|</span> <span class="n" style="color: #333;">buster</span><span class="p">,</span><span class="n" style="color: #333;">bullseye</span><span class="p">,</span><span class="n" style="color: #333;">sid</span> <span class="p">|</span> <span class="p">|</span> </span>
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47
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<td class="diff-line-num new_line" data-linenumber="46" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
46
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<pre style="margin: 0;"> <span id="LC46" class="line" lang="mosel"> <span class="n" style="color: #333;">presto</span> <span class="p">|</span> <span class="p">|</span> <span class="p">|</span> <span class="p">|</span> <span class="p">|</span> </span>
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48
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<td class="diff-line-num new_line" data-linenumber="47" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
47
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<pre style="margin: 0;"> <span id="LC47" class="line" lang="mosel"> <span class="n" style="color: #333;">prodigal</span> <span class="p">|</span> <span class="n" style="color: #333;">amd64</span><span class="p">,</span><span class="n" style="color: #333;">arm64</span><span class="p">,</span><span class="n" style="color: #333;">ppc64el</span> <span class="p">|</span> <span class="n" style="color: #333;">main</span> <span class="p">|</span> <span class="n" style="color: #333;">buster</span><span class="p">,</span><span class="n" style="color: #333;">bullseye</span><span class="p">,</span><span class="n" style="color: #333;">sid</span> <span class="p">|</span> <span class="p">|</span> </span>
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49
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<td class="diff-line-num new_line old" data-linenumber="48" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC49" class="line" lang="mosel"> <span class="n" style="color: #333;">pycoqc</span> <span class="p">|</span> <span class="n" style="color: #333;">all</span> <span class="p">|</span> <span class="n" style="color: #333;">main</span> <span class="p">|</span> <span class="n" style="color: #333;"><span class="idiff left">sid</span></span><span class="idiff right"> </span> <span class="p">|</span> <span class="p">|</span> </span>
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<td class="diff-line-num new new_line" data-linenumber="48" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
48
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<pre style="margin: 0;">+<span id="LC48" class="line" lang="mosel"> <span class="n" style="color: #333;">pycoqc</span> <span class="p">|</span> <span class="n" style="color: #333;">all</span> <span class="p">|</span> <span class="n" style="color: #333;">main</span> <span class="p">|</span> <span class="n" style="color: #333;"><span class="idiff left">bullseye</span></span><span class="p"><span class="idiff">,</span></span><span class="n" style="color: #333;"><span class="idiff right">sid</span></span> <span class="p">|</span> <span class="p">|</span> </span>
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50
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<pre style="margin: 0;"> <span id="LC49" class="line" lang="mosel"> <span class="n" style="color: #333;">python3</span><span class="p">-</span><span class="n" style="color: #333;">biopython</span> <span class="p">|</span> <span class="n" style="color: #333;">amd64</span><span class="p">,</span><span class="n" style="color: #333;">arm64</span><span class="p">,</span><span class="n" style="color: #333;">ppc64el</span> <span class="p">|</span> <span class="n" style="color: #333;">main</span> <span class="p">|</span> <span class="n" style="color: #333;">buster</span><span class="p">,</span><span class="n" style="color: #333;">bullseye</span><span class="p">,</span><span class="n" style="color: #333;">sid</span> <span class="p">|</span> <span class="p">|</span> <span class="n" style="color: #333;">Biopython</span></span>
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51
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50
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<pre style="margin: 0;"> <span id="LC50" class="line" lang="mosel"> <span class="n" style="color: #333;">python3</span><span class="p">-</span><span class="n" style="color: #333;">deeptools</span> <span class="p">|</span> <span class="n" style="color: #333;">all</span> <span class="p">|</span> <span class="n" style="color: #333;">main</span> <span class="p">|</span> <span class="n" style="color: #333;">bullseye</span><span class="p">,</span><span class="n" style="color: #333;">sid</span> <span class="p">|</span> <span class="n" style="color: #333;">deeptools</span> <span class="p">|</span> <span class="n" style="color: #333;">deeptools</span></span>
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52
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<td class="diff-line-num new_line" data-linenumber="51" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
51
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<pre style="margin: 0;"> <span id="LC51" class="line" lang="mosel"> <span class="n" style="color: #333;">python3</span><span class="p">-</span><span class="n" style="color: #333;">htseq</span> <span class="p">|</span> <span class="n" style="color: #333;">amd64</span><span class="p">,</span><span class="n" style="color: #333;">arm64</span><span class="p">,</span><span class="n" style="color: #333;">ppc64el</span> <span class="p">|</span> <span class="n" style="color: #333;">main</span> <span class="p">|</span> <span class="n" style="color: #333;">buster</span><span class="p">,</span><span class="n" style="color: #333;">bullseye</span><span class="p">,</span><span class="n" style="color: #333;">sid</span> <span class="p">|</span> <span class="p">|</span> <span class="n" style="color: #333;">htseq</span></span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="79" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="78" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -79,6 +78,7 @@ Last-Update: Tue, 12 May 2020 10:50:33 +0200</td>
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<td class="diff-line-num old_line" data-linenumber="79" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
79
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<td class="diff-line-num new_line" data-linenumber="78" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
78
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<pre style="margin: 0;"> <span id="LC78" class="line" lang="mosel"> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">cran</span><span class="p">-</span><span class="n" style="color: #333;">shazam</span> <span class="p">|</span> <span class="n" style="color: #333;">all</span> <span class="p">|</span> <span class="n" style="color: #333;">main</span> <span class="p">|</span> <span class="n" style="color: #333;">buster</span><span class="p">,</span><span class="n" style="color: #333;">bullseye</span><span class="p">,</span><span class="n" style="color: #333;">sid</span> <span class="p">|</span> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">shazam</span> <span class="p">|</span> </span>
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80
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<td class="diff-line-num new_line" data-linenumber="79" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
79
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<pre style="margin: 0;"> <span id="LC79" class="line" lang="mosel"> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">cran</span><span class="p">-</span><span class="n" style="color: #333;">tigger</span> <span class="p">|</span> <span class="n" style="color: #333;">all</span> <span class="p">|</span> <span class="n" style="color: #333;">main</span> <span class="p">|</span> <span class="n" style="color: #333;">buster</span><span class="p">,</span><span class="n" style="color: #333;">bullseye</span><span class="p">,</span><span class="n" style="color: #333;">sid</span> <span class="p">|</span> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">tigger</span> <span class="p">|</span> </span>
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<td class="diff-line-num old_line" data-linenumber="81" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
81
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<td class="diff-line-num new_line" data-linenumber="80" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
80
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<pre style="margin: 0;"> <span id="LC80" class="line" lang="mosel"> <span class="n" style="color: #333;">rna</span><span class="p">-</span><span class="n" style="color: #333;">star</span> <span class="p">|</span> <span class="n" style="color: #333;">amd64</span><span class="p">,</span><span class="n" style="color: #333;">arm64</span><span class="p">,</span><span class="n" style="color: #333;">ppc64el</span> <span class="p">|</span> <span class="n" style="color: #333;">main</span> <span class="p">|</span> <span class="n" style="color: #333;">buster</span><span class="p">,</span><span class="n" style="color: #333;">bullseye</span><span class="p">,</span><span class="n" style="color: #333;">sid</span> <span class="p">|</span> <span class="n" style="color: #333;">star</span> <span class="p">|</span> <span class="n" style="color: #333;">star</span></span>
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<td class="diff-line-num new old_line" data-linenumber="82" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="81" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
81
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<pre style="margin: 0;">+<span id="LC81" class="line" lang="mosel"> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">other</span><span class="p">-</span><span class="n" style="color: #333;">ascat</span> <span class="p">|</span> <span class="p">|</span> <span class="p">|</span> <span class="p">|</span> <span class="p">|</span> </span>
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82
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<td class="diff-line-num new_line" data-linenumber="82" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
82
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<pre style="margin: 0;"> <span id="LC82" class="line" lang="mosel"> <span class="n" style="color: #333;">salmon</span> <span class="p">|</span> <span class="n" style="color: #333;">amd64</span> <span class="p">|</span> <span class="n" style="color: #333;">main</span> <span class="p">|</span> <span class="n" style="color: #333;">buster</span><span class="p">,</span><span class="n" style="color: #333;">bullseye</span><span class="p">,</span><span class="n" style="color: #333;">sid</span> <span class="p">|</span> <span class="n" style="color: #333;">salmon</span> <span class="p">|</span> <span class="n" style="color: #333;">salmon</span></span>
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<td class="diff-line-num old_line" data-linenumber="83" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
83
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<td class="diff-line-num new_line" data-linenumber="83" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
83
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<pre style="margin: 0;"> <span id="LC83" class="line" lang="mosel"> <span class="n" style="color: #333;">samtools</span> <span class="p">|</span> <span class="n" style="color: #333;">amd64</span><span class="p">,</span><span class="n" style="color: #333;">arm64</span><span class="p">,</span><span class="n" style="color: #333;">ppc64el</span> <span class="p">|</span> <span class="n" style="color: #333;">main</span> <span class="p">|</span> <span class="n" style="color: #333;">buster</span><span class="p">,</span><span class="n" style="color: #333;">bullseye</span><span class="p">,</span><span class="n" style="color: #333;">sid</span> <span class="p">|</span> <span class="n" style="color: #333;">samtools</span> <span class="p">|</span> <span class="n" style="color: #333;">samtools</span></span>
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<td class="diff-line-num old_line" data-linenumber="84" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
84
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<td class="diff-line-num new_line" data-linenumber="84" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
84
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<pre style="margin: 0;"> <span id="LC84" class="line" lang="mosel"> <span class="n" style="color: #333;">snakemake</span> <span class="p">|</span> <span class="n" style="color: #333;">all</span> <span class="p">|</span> <span class="n" style="color: #333;">main</span> <span class="p">|</span> <span class="n" style="color: #333;">buster</span><span class="p">,</span><span class="n" style="color: #333;">bullseye</span><span class="p">,</span><span class="n" style="color: #333;">sid</span> <span class="p">|</span> <span class="n" style="color: #333;">snakemake</span> <span class="p">|</span> <span class="n" style="color: #333;">snakemake</span></span>
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<a href="https://salsa.debian.org/blends-team/med/-/compare/154220e95faa271e96979606f50d1cdb0a4c63cd...4c338778b16867f152e91f1f2039a2723ce208f9#2f3a29085b215ab5e23031c8099b8fde971b80f0"><strong>tasks/covid-19</strong></a>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="84" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="84" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -84,7 +84,6 @@ Recommends: nanoplot</td>
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<td class="diff-line-num old_line" data-linenumber="84" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
84
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<td class="diff-line-num new_line" data-linenumber="84" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
84
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<pre style="margin: 0;"> <span id="LC84" class="line" lang="plaintext">Recommends: fastqc</span>
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<td class="diff-line-num old_line" data-linenumber="85" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
85
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85
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<pre style="margin: 0;"> <span id="LC85" class="line" lang="plaintext"></span>
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86
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<td class="diff-line-num new_line" data-linenumber="86" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
86
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<pre style="margin: 0;"> <span id="LC86" class="line" lang="plaintext">Recommends: graphmap2</span>
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<td class="diff-line-num old old_line" data-linenumber="87" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
87
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<td class="diff-line-num new_line old" data-linenumber="87" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC87" class="line" lang="plaintext">Homepage: https://github.com/lbcb-sci/graphmap2</span>
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<td class="diff-line-num old_line" data-linenumber="88" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
88
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<td class="diff-line-num new_line" data-linenumber="87" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
87
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<pre style="margin: 0;"> <span id="LC87" class="line" lang="plaintext"></span>
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89
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<td class="diff-line-num new_line" data-linenumber="88" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
88
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<pre style="margin: 0;"> <span id="LC88" class="line" lang="plaintext">Recommends: samtools</span>
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90
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<td class="diff-line-num new_line" data-linenumber="89" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
89
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<pre style="margin: 0;"> <span id="LC89" class="line" lang="plaintext"></span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="180" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="179" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -180,7 +179,6 @@ Recommends: metabat</td>
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180
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179
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<pre style="margin: 0;"> <span id="LC179" class="line" lang="plaintext">Homepage: https://bitbucket.org/berkeleylab/metabat</span>
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<td class="diff-line-num old_line" data-linenumber="181" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC180" class="line" lang="plaintext"></span>
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<td class="diff-line-num old_line" data-linenumber="182" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC181" class="line" lang="plaintext">Recommends: nanolyse</span>
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<td class="diff-line-num old old_line" data-linenumber="183" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
183
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<pre style="margin: 0;">-<span id="LC183" class="line" lang="plaintext">Homepage: https://pypi.org/project/NanoLyse/1.1.0/</span>
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<td class="diff-line-num old_line" data-linenumber="184" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC182" class="line" lang="plaintext"></span>
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<td class="diff-line-num old_line" data-linenumber="185" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC183" class="line" lang="plaintext">Recommends: porechop</span>
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<td class="diff-line-num old_line" data-linenumber="186" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC184" class="line" lang="plaintext"></span>
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