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<h3>
Andreas Tille pushed to branch master
at <a href="https://salsa.debian.org/blends-team/med">Debian Blends Team / med</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/blends-team/med/-/commit/692d565fd0df6bfcd631edbfb12b6abb16507fd9">692d565f</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-06-24T18:37:21+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Revert "Update bio - substituted (most) recommendations with suggestions" - this heavy change should be discussed first. Please use the extra branch.
This reverts commit d272989338037be9ff8eb691a1ed8b8a2216c42d.
</pre>
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<h4>1 changed file:</h4>
<ul>
<li class="file-stats">
<a href="#26b0fba1305554e48a6078ef69d0cfe948ad5765">
tasks/bio
</a>
</li>
</ul>
<h4>Changes:</h4>
<li id="26b0fba1305554e48a6078ef69d0cfe948ad5765">
<a href="https://salsa.debian.org/blends-team/med/-/commit/692d565fd0df6bfcd631edbfb12b6abb16507fd9#26b0fba1305554e48a6078ef69d0cfe948ad5765"><strong>tasks/bio</strong></a>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="371" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="371" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -371,7 +371,7 @@ Suggests: flexbar</td>
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371
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<td class="diff-line-num new_line" data-linenumber="371" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
371
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<pre style="margin: 0;"> <span id="LC371" class="line" lang="mosel"></span>
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<td class="diff-line-num old_line" data-linenumber="372" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
372
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<td class="diff-line-num new_line" data-linenumber="372" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
372
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<pre style="margin: 0;"> <span id="LC372" class="line" lang="mosel"><span class="n" style="color: #333;">Suggests</span><span class="p">:</span> <span class="n" style="color: #333;">blimps</span><span class="p">-</span><span class="n" style="color: #333;">utils</span></span>
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373
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<td class="diff-line-num new_line" data-linenumber="373" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
373
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<pre style="margin: 0;"> <span id="LC373" class="line" lang="mosel"></span>
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<td class="diff-line-num old old_line" data-linenumber="374" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
374
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<td class="diff-line-num new_line old" data-linenumber="374" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC374" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">sift</span></span>
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<td class="diff-line-num new old_line" data-linenumber="375" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="374" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
374
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<pre style="margin: 0;">+<span id="LC374" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">sift</span></span>
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375
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375
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<pre style="margin: 0;"> <span id="LC375" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="376" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
376
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<td class="diff-line-num new_line" data-linenumber="376" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
376
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<pre style="margin: 0;"> <span id="LC376" class="line" lang="mosel"><span class="n" style="color: #333;">Suggests</span><span class="p">:</span> <span class="n" style="color: #333;">neobio</span></span>
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377
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377
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<pre style="margin: 0;"> <span id="LC377" class="line" lang="mosel"></span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="687" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="687" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -687,409 +687,409 @@ Suggests: fsm-lite</td>
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687
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<td class="diff-line-num new_line" data-linenumber="687" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
687
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<pre style="margin: 0;"> <span id="LC687" class="line" lang="mosel"></span>
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688
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<td class="diff-line-num new_line" data-linenumber="688" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
688
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<pre style="margin: 0;"> <span id="LC688" class="line" lang="mosel"><span class="n" style="color: #333;">Suggests</span><span class="p">:</span> <span class="n" style="color: #333;">garli</span></span>
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689
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689
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<pre style="margin: 0;"> <span id="LC689" class="line" lang="mosel"></span>
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690
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<pre style="margin: 0;">-<span id="LC690" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">gatb</span><span class="p">-</span><span class="n" style="color: #333;">core</span></span>
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<td class="diff-line-num new new_line" data-linenumber="690" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
690
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<pre style="margin: 0;">+<span id="LC690" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">gatb</span><span class="p">-</span><span class="n" style="color: #333;">core</span></span>
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691
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691
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<pre style="margin: 0;"> <span id="LC691" class="line" lang="mosel"></span>
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692
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<td class="diff-line-num new_line old" data-linenumber="692" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC692" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">gatk</span></span>
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692
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<pre style="margin: 0;">+<span id="LC692" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">gatk</span></span>
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693
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693
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<pre style="margin: 0;"> <span id="LC693" class="line" lang="mosel"></span>
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694
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<pre style="margin: 0;">-<span id="LC694" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">genometester</span></span>
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694
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<pre style="margin: 0;">+<span id="LC694" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">genometester</span></span>
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695
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695
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<pre style="margin: 0;"> <span id="LC695" class="line" lang="mosel"></span>
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696
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<pre style="margin: 0;">-<span id="LC696" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">genomethreader</span></span>
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<pre style="margin: 0;">+<span id="LC696" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">genomethreader</span></span>
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697
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698
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<pre style="margin: 0;">-<span id="LC698" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">genometools</span></span>
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698
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<pre style="margin: 0;">+<span id="LC698" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">genometools</span></span>
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699
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700
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<pre style="margin: 0;">-<span id="LC700" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">gerp</span><span class="p">++</span></span>
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700
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<pre style="margin: 0;">+<span id="LC700" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">gerp</span><span class="p">++</span></span>
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701
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701
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<pre style="margin: 0;"> <span id="LC701" class="line" lang="mosel"></span>
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702
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<pre style="margin: 0;">-<span id="LC702" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">gffread</span></span>
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702
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<pre style="margin: 0;">+<span id="LC702" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">gffread</span></span>
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703
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703
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<pre style="margin: 0;"> <span id="LC703" class="line" lang="mosel"></span>
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704
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<pre style="margin: 0;">-<span id="LC704" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">grabix</span></span>
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704
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<pre style="margin: 0;">+<span id="LC704" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">grabix</span></span>
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705
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705
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<pre style="margin: 0;"> <span id="LC705" class="line" lang="mosel"></span>
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706
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<pre style="margin: 0;">-<span id="LC706" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">graphlan</span></span>
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706
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<pre style="margin: 0;">+<span id="LC706" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">graphlan</span></span>
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707
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707
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<pre style="margin: 0;"> <span id="LC707" class="line" lang="mosel"></span>
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708
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<pre style="margin: 0;">-<span id="LC708" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">graphmap2</span></span>
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708
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<pre style="margin: 0;">+<span id="LC708" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">graphmap2</span></span>
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709
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709
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<pre style="margin: 0;"> <span id="LC709" class="line" lang="mosel"></span>
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710
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<pre style="margin: 0;">-<span id="LC710" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">gwama</span></span>
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710
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<pre style="margin: 0;">+<span id="LC710" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">gwama</span></span>
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711
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711
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<pre style="margin: 0;"> <span id="LC711" class="line" lang="mosel"></span>
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712
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<pre style="margin: 0;">-<span id="LC712" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">gubbins</span></span>
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<pre style="margin: 0;">+<span id="LC712" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">gubbins</span></span>
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<pre style="margin: 0;">-<span id="LC714" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">haploview</span><span class="p">-</span><span class="n" style="color: #333;">cran</span><span class="p">-</span><span class="n" style="color: #333;">amap</span></span>
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<pre style="margin: 0;">+<span id="LC714" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">haploview</span><span class="p">-</span><span class="n" style="color: #333;">cran</span><span class="p">-</span><span class="n" style="color: #333;">amap</span></span>
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<pre style="margin: 0;">-<span id="LC716" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">harvest</span><span class="p">-</span><span class="n" style="color: #333;">tools</span></span>
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<pre style="margin: 0;">+<span id="LC716" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">harvest</span><span class="p">-</span><span class="n" style="color: #333;">tools</span></span>
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<pre style="margin: 0;">-<span id="LC718" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">hilive</span></span>
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<pre style="margin: 0;">+<span id="LC718" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">hilive</span></span>
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<pre style="margin: 0;"> <span id="LC719" class="line" lang="mosel"></span>
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<pre style="margin: 0;">-<span id="LC720" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">hisat2</span></span>
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<pre style="margin: 0;">+<span id="LC720" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">hisat2</span></span>
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<pre style="margin: 0;">-<span id="LC722" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">hmmer2</span></span>
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722
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<pre style="margin: 0;">+<span id="LC722" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">hmmer2</span></span>
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723
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<pre style="margin: 0;"> <span id="LC723" class="line" lang="mosel"><span class="n" style="color: #333;">Remark</span><span class="p">:</span> <span class="n" style="color: #333;">This</span> <span class="n" style="color: #333;">older</span> <span class="k" style="font-weight: 600;">version</span> <span class="k" style="font-weight: 600;">of</span> <span class="n" style="color: #333;">HMMER</span> <span class="n" style="color: #333;">is</span> <span class="n" style="color: #333;">used</span> <span class="k" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">some</span> <span class="n" style="color: #333;">applications</span></span>
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<pre style="margin: 0;"> <span id="LC724" class="line" lang="mosel"> <span class="k" style="font-weight: 600;">While</span> <span class="n" style="color: #333;">Debian</span> <span class="n" style="color: #333;">has</span> <span class="n" style="color: #333;">HMMER</span> <span class="m" style="color: #099;">3</span> <span class="n" style="color: #333;">since</span> <span class="n" style="color: #333;">some</span> <span class="n" style="color: #333;">time</span> <span class="n" style="color: #333;">there</span> <span class="n" style="color: #333;">are</span> <span class="n" style="color: #333;">users</span> <span class="k" style="font-weight: 600;">of</span></span>
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725
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<pre style="margin: 0;"> <span id="LC725" class="line" lang="mosel"> <span class="n" style="color: #333;">HMMER</span> <span class="m" style="color: #099;">2</span> <span class="n" style="color: #333;">interested</span> <span class="k" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">having</span> <span class="n" style="color: #333;">this</span> <span class="n" style="color: #333;">old</span> <span class="k" style="font-weight: 600;">version</span> <span class="n" style="color: #333;">available</span> <span class="k" style="font-weight: 600;">and</span></span>
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<pre style="margin: 0;"> <span id="LC726" class="line" lang="mosel"> <span class="n" style="color: #333;">thus</span> <span class="n" style="color: #333;">the</span> <span class="k" style="font-weight: 600;">package</span> <span class="n" style="color: #333;">is</span> <span class="n" style="color: #333;">reintroduced</span><span class="p">.</span></span>
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<pre style="margin: 0;"> <span id="LC727" class="line" lang="mosel"></span>
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<pre style="margin: 0;">-<span id="LC728" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">htqc</span></span>
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728
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<pre style="margin: 0;">+<span id="LC728" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">htqc</span></span>
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729
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729
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<pre style="margin: 0;"> <span id="LC729" class="line" lang="mosel"></span>
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730
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<pre style="margin: 0;">-<span id="LC730" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">idba</span></span>
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730
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<pre style="margin: 0;">+<span id="LC730" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">idba</span></span>
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731
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731
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<pre style="margin: 0;"> <span id="LC731" class="line" lang="mosel"></span>
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732
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<td class="diff-line-num new_line old" data-linenumber="732" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC732" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">idefix</span></span>
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732
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<pre style="margin: 0;">+<span id="LC732" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">idefix</span></span>
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733
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733
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<pre style="margin: 0;"> <span id="LC733" class="line" lang="mosel"></span>
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734
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<pre style="margin: 0;">-<span id="LC734" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">igdiscover</span></span>
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734
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<pre style="margin: 0;">+<span id="LC734" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">igdiscover</span></span>
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735
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735
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<pre style="margin: 0;"> <span id="LC735" class="line" lang="mosel"></span>
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736
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<pre style="margin: 0;">-<span id="LC736" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">indelible</span></span>
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736
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<pre style="margin: 0;">+<span id="LC736" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">indelible</span></span>
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737
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737
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<pre style="margin: 0;"> <span id="LC737" class="line" lang="mosel"></span>
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738
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<pre style="margin: 0;">-<span id="LC738" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">insilicoseq</span></span>
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738
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<pre style="margin: 0;">+<span id="LC738" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">insilicoseq</span></span>
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739
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739
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<pre style="margin: 0;"> <span id="LC739" class="line" lang="mosel"></span>
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740
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<pre style="margin: 0;">-<span id="LC740" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">iqtree</span></span>
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740
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<pre style="margin: 0;">+<span id="LC740" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">iqtree</span></span>
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741
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741
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<pre style="margin: 0;"> <span id="LC741" class="line" lang="mosel"></span>
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742
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<pre style="margin: 0;">-<span id="LC742" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">iva</span></span>
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742
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<pre style="margin: 0;">+<span id="LC742" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">iva</span></span>
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743
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743
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<pre style="margin: 0;"> <span id="LC743" class="line" lang="mosel"></span>
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744
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<pre style="margin: 0;">-<span id="LC744" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">jaligner</span></span>
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744
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<pre style="margin: 0;">+<span id="LC744" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">jaligner</span></span>
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745
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745
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<pre style="margin: 0;"> <span id="LC745" class="line" lang="mosel"></span>
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746
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<pre style="margin: 0;">-<span id="LC746" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">jbrowse</span></span>
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746
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<pre style="margin: 0;">+<span id="LC746" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">jbrowse</span></span>
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747
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747
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<pre style="margin: 0;"> <span id="LC747" class="line" lang="mosel"></span>
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748
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<pre style="margin: 0;">-<span id="LC748" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">jmodeltest</span></span>
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748
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<pre style="margin: 0;">+<span id="LC748" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">jmodeltest</span></span>
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749
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749
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<pre style="margin: 0;"> <span id="LC749" class="line" lang="mosel"></span>
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750
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<pre style="margin: 0;">-<span id="LC750" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">kaptive</span><span class="p">,</span> <span class="n" style="color: #333;">kleborate</span></span>
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750
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<pre style="margin: 0;">+<span id="LC750" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">kaptive</span><span class="p">,</span> <span class="n" style="color: #333;">kleborate</span></span>
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751
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751
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<pre style="margin: 0;"> <span id="LC751" class="line" lang="mosel"></span>
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752
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<pre style="margin: 0;">-<span id="LC752" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">kempbasu</span></span>
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752
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<pre style="margin: 0;">+<span id="LC752" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">kempbasu</span></span>
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753
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753
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<pre style="margin: 0;"> <span id="LC753" class="line" lang="mosel"></span>
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754
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<pre style="margin: 0;">-<span id="LC754" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">kineticstools</span></span>
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754
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<pre style="margin: 0;">+<span id="LC754" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">kineticstools</span></span>
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755
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755
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<pre style="margin: 0;"> <span id="LC755" class="line" lang="mosel"></span>
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756
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<pre style="margin: 0;">-<span id="LC756" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">kissplice</span></span>
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756
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<pre style="margin: 0;">+<span id="LC756" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">kissplice</span></span>
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757
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757
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<pre style="margin: 0;"> <span id="LC757" class="line" lang="mosel"></span>
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758
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<pre style="margin: 0;">-<span id="LC758" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">kma</span></span>
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758
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<pre style="margin: 0;">+<span id="LC758" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">kma</span></span>
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759
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759
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<pre style="margin: 0;"> <span id="LC759" class="line" lang="mosel"></span>
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760
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<pre style="margin: 0;">-<span id="LC760" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">kmerresistance</span></span>
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<td class="diff-line-num new new_line" data-linenumber="760" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
760
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<pre style="margin: 0;">+<span id="LC760" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">kmerresistance</span></span>
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761
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761
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<pre style="margin: 0;"> <span id="LC761" class="line" lang="mosel"></span>
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<td class="diff-line-num old old_line" data-linenumber="762" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
762
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<td class="diff-line-num new_line old" data-linenumber="762" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC762" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">kraken</span><span class="p">,</span> <span class="n" style="color: #333;">kraken2</span></span>
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<td class="diff-line-num new old_line" data-linenumber="763" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="762" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
762
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<pre style="margin: 0;">+<span id="LC762" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">kraken</span><span class="p">,</span> <span class="n" style="color: #333;">kraken2</span></span>
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763
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763
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<pre style="margin: 0;"> <span id="LC763" class="line" lang="mosel"></span>
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764
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<td class="diff-line-num new_line old" data-linenumber="764" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC764" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">lagan</span></span>
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764
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<pre style="margin: 0;">+<span id="LC764" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">lagan</span></span>
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765
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765
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<pre style="margin: 0;"> <span id="LC765" class="line" lang="mosel"><span class="n" style="color: #333;">X</span><span class="p">-</span><span class="n" style="color: #333;">Category</span><span class="p">:</span> <span class="n" style="color: #333;">Comparative</span> <span class="n" style="color: #333;">genomics</span></span>
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<td class="diff-line-num old_line" data-linenumber="766" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
766
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766
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<pre style="margin: 0;"> <span id="LC766" class="line" lang="mosel"></span>
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<td class="diff-line-num old old_line" data-linenumber="767" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
767
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<td class="diff-line-num new_line old" data-linenumber="767" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC767" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">lambda</span><span class="p">-</span><span class="n" style="color: #333;">align</span><span class="p">,</span> <span class="n" style="color: #333;">lambda</span><span class="p">-</span><span class="n" style="color: #333;">align2</span></span>
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<td class="diff-line-num new new_line" data-linenumber="767" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
767
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<pre style="margin: 0;">+<span id="LC767" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">lambda</span><span class="p">-</span><span class="n" style="color: #333;">align</span><span class="p">,</span> <span class="n" style="color: #333;">lambda</span><span class="p">-</span><span class="n" style="color: #333;">align2</span></span>
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768
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768
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<pre style="margin: 0;"> <span id="LC768" class="line" lang="mosel"></span>
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769
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<td class="diff-line-num new_line old" data-linenumber="769" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC769" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">lastz</span></span>
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769
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<pre style="margin: 0;">+<span id="LC769" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">lastz</span></span>
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770
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770
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<pre style="margin: 0;"> <span id="LC770" class="line" lang="mosel"></span>
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771
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<td class="diff-line-num new_line old" data-linenumber="771" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC771" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">leaff</span></span>
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771
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<pre style="margin: 0;">+<span id="LC771" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">leaff</span></span>
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772
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772
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<pre style="margin: 0;"> <span id="LC772" class="line" lang="mosel"></span>
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773
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<td class="diff-line-num new_line old" data-linenumber="773" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC773" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">ltrsift</span></span>
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773
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<pre style="margin: 0;">+<span id="LC773" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">ltrsift</span></span>
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774
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774
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<pre style="margin: 0;"> <span id="LC774" class="line" lang="mosel"></span>
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775
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<pre style="margin: 0;">-<span id="LC775" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">lofreq</span></span>
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775
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<pre style="margin: 0;">+<span id="LC775" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">lofreq</span></span>
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776
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776
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<pre style="margin: 0;"> <span id="LC776" class="line" lang="mosel"></span>
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777
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<pre style="margin: 0;">-<span id="LC777" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">kallisto</span></span>
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777
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<pre style="margin: 0;">+<span id="LC777" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">kallisto</span></span>
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778
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778
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<pre style="margin: 0;"> <span id="LC778" class="line" lang="mosel"></span>
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779
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<pre style="margin: 0;">-<span id="LC779" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">khmer</span></span>
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779
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<pre style="margin: 0;">+<span id="LC779" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">khmer</span></span>
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780
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780
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<pre style="margin: 0;"> <span id="LC780" class="line" lang="mosel"></span>
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781
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<pre style="margin: 0;">-<span id="LC781" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">kmer</span></span>
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781
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<pre style="margin: 0;">+<span id="LC781" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">kmer</span></span>
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782
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782
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<pre style="margin: 0;"> <span id="LC782" class="line" lang="mosel"></span>
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783
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<td class="diff-line-num new_line old" data-linenumber="783" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC783" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">radiant</span></span>
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783
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<pre style="margin: 0;">+<span id="LC783" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">radiant</span></span>
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784
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784
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<pre style="margin: 0;"> <span id="LC784" class="line" lang="mosel"></span>
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785
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<td class="diff-line-num new_line old" data-linenumber="785" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC785" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">lefse</span></span>
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<td class="diff-line-num new old_line" data-linenumber="786" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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785
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<pre style="margin: 0;">+<span id="LC785" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">lefse</span></span>
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786
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786
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<pre style="margin: 0;"> <span id="LC786" class="line" lang="mosel"></span>
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<td class="diff-line-num old old_line" data-linenumber="787" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
787
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<td class="diff-line-num new_line old" data-linenumber="787" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC787" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">lighter</span></span>
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<td class="diff-line-num new old_line" data-linenumber="788" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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787
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<pre style="margin: 0;">+<span id="LC787" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">lighter</span></span>
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788
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788
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<pre style="margin: 0;"> <span id="LC788" class="line" lang="mosel"></span>
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<td class="diff-line-num old old_line" data-linenumber="789" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
789
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<td class="diff-line-num new_line old" data-linenumber="789" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC789" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">lumpy</span><span class="p">-</span><span class="n" style="color: #333;">sv</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="790" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="789" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
789
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<pre style="margin: 0;">+<span id="LC789" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">lumpy</span><span class="p">-</span><span class="n" style="color: #333;">sv</span></span>
</pre>
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790
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790
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<pre style="margin: 0;"> <span id="LC790" class="line" lang="mosel"></span>
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<td class="diff-line-num old old_line" data-linenumber="791" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
791
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<td class="diff-line-num new_line old" data-linenumber="791" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC791" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">mach</span><span class="p">-</span><span class="n" style="color: #333;">haplotyper</span></span>
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791
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<pre style="margin: 0;">+<span id="LC791" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">mach</span><span class="p">-</span><span class="n" style="color: #333;">haplotyper</span></span>
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792
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792
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<pre style="margin: 0;"> <span id="LC792" class="line" lang="mosel"></span>
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793
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<pre style="margin: 0;">-<span id="LC793" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">macs</span></span>
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793
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<pre style="margin: 0;">+<span id="LC793" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">macs</span></span>
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794
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794
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<pre style="margin: 0;"> <span id="LC794" class="line" lang="mosel"></span>
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795
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<pre style="margin: 0;">-<span id="LC795" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">macsyfinder</span></span>
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795
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<pre style="margin: 0;">+<span id="LC795" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">macsyfinder</span></span>
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796
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796
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<pre style="margin: 0;"> <span id="LC796" class="line" lang="mosel"></span>
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797
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<td class="diff-line-num new_line old" data-linenumber="797" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC797" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">maffilter</span></span>
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797
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<pre style="margin: 0;">+<span id="LC797" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">maffilter</span></span>
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798
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798
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<pre style="margin: 0;"> <span id="LC798" class="line" lang="mosel"></span>
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799
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<pre style="margin: 0;">-<span id="LC799" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">mage2tab</span><span class="p">,</span> <span class="n" style="color: #333;">tab2mage</span></span>
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799
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<pre style="margin: 0;">+<span id="LC799" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">mage2tab</span><span class="p">,</span> <span class="n" style="color: #333;">tab2mage</span></span>
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800
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800
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<pre style="margin: 0;"> <span id="LC800" class="line" lang="mosel"></span>
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801
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<pre style="margin: 0;">-<span id="LC801" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">malt</span></span>
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801
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<pre style="margin: 0;">+<span id="LC801" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">malt</span></span>
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802
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802
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<pre style="margin: 0;"> <span id="LC802" class="line" lang="mosel"></span>
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803
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<pre style="margin: 0;">-<span id="LC803" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">manta</span></span>
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803
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<pre style="margin: 0;">+<span id="LC803" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">manta</span></span>
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804
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804
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<pre style="margin: 0;"> <span id="LC804" class="line" lang="mosel"></span>
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805
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<pre style="margin: 0;">-<span id="LC805" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">mapdamage</span></span>
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805
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<pre style="margin: 0;">+<span id="LC805" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">mapdamage</span></span>
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806
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806
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<pre style="margin: 0;"> <span id="LC806" class="line" lang="mosel"></span>
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807
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<pre style="margin: 0;">-<span id="LC807" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">martj</span></span>
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807
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<pre style="margin: 0;">+<span id="LC807" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">martj</span></span>
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808
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808
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<pre style="margin: 0;"> <span id="LC808" class="line" lang="mosel"></span>
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809
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<pre style="margin: 0;">-<span id="LC809" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">mash</span></span>
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809
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<pre style="margin: 0;">+<span id="LC809" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">mash</span></span>
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810
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810
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<pre style="margin: 0;"> <span id="LC810" class="line" lang="mosel"></span>
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811
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<pre style="margin: 0;">-<span id="LC811" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">progressivemauve</span></span>
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811
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<pre style="margin: 0;">+<span id="LC811" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">progressivemauve</span></span>
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812
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812
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<pre style="margin: 0;"> <span id="LC812" class="line" lang="mosel"><span class="n" style="color: #333;">X</span><span class="p">-</span><span class="n" style="color: #333;">Category</span><span class="p">:</span> <span class="n" style="color: #333;">Multiple</span> <span class="n" style="color: #333;">genome</span> <span class="n" style="color: #333;">alignment</span></span>
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813
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813
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<pre style="margin: 0;"> <span id="LC813" class="line" lang="mosel"><span class="n" style="color: #333;">X</span><span class="p">-</span><span class="n" style="color: #333;">Importance</span><span class="p">:</span> <span class="n" style="color: #333;">efficient</span></span>
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814
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814
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<pre style="margin: 0;"> <span id="LC814" class="line" lang="mosel"></span>
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815
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<pre style="margin: 0;">-<span id="LC815" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">mauve</span><span class="p">-</span><span class="n" style="color: #333;">aligner</span></span>
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815
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<pre style="margin: 0;">+<span id="LC815" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">mauve</span><span class="p">-</span><span class="n" style="color: #333;">aligner</span></span>
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816
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816
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<pre style="margin: 0;"> <span id="LC816" class="line" lang="mosel"></span>
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817
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<pre style="margin: 0;">-<span id="LC817" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">medaka</span></span>
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817
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<pre style="margin: 0;">+<span id="LC817" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">medaka</span></span>
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818
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818
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<pre style="margin: 0;"> <span id="LC818" class="line" lang="mosel"></span>
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819
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<pre style="margin: 0;">-<span id="LC819" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">meme</span></span>
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819
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<pre style="margin: 0;">+<span id="LC819" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">meme</span></span>
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820
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820
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<pre style="margin: 0;"> <span id="LC820" class="line" lang="mosel"><span class="n" style="color: #333;">License</span><span class="p">:</span> <span class="n" style="color: #333;">non</span><span class="p">-</span><span class="n" style="color: #333;">free</span> <span class="n" style="color: #333;">for</span> <span class="n" style="color: #333;">commercial</span> <span class="n" style="color: #333;">purpose</span> <span class="p">(</span><span class="n" style="color: #333;">http</span><span class="p">://</span><span class="n" style="color: #333;">meme</span><span class="p">.</span><span class="n" style="color: #333;">nbcr</span><span class="p">.</span><span class="n" style="color: #333;">net</span><span class="p">/</span><span class="n" style="color: #333;">meme</span><span class="p">/</span><span class="n" style="color: #333;">COPYRIGHT</span><span class="p">.</span><span class="n" style="color: #333;">html</span><span class="p">)</span></span>
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821
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821
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<pre style="margin: 0;"> <span id="LC821" class="line" lang="mosel"></span>
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822
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<pre style="margin: 0;">-<span id="LC822" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">meryl</span></span>
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822
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<pre style="margin: 0;">+<span id="LC822" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">meryl</span></span>
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823
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823
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<pre style="margin: 0;"> <span id="LC823" class="line" lang="mosel"></span>
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824
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<pre style="margin: 0;">-<span id="LC824" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">metabit</span></span>
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824
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<pre style="margin: 0;">+<span id="LC824" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">metabit</span></span>
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825
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825
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<pre style="margin: 0;"> <span id="LC825" class="line" lang="mosel"></span>
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826
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<td class="diff-line-num new_line old" data-linenumber="826" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC826" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">metaphlan2</span></span>
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<td class="diff-line-num new old_line" data-linenumber="827" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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826
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<pre style="margin: 0;">+<span id="LC826" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">metaphlan2</span></span>
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827
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827
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<pre style="margin: 0;"> <span id="LC827" class="line" lang="mosel"></span>
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<td class="diff-line-num old old_line" data-linenumber="828" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
828
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<td class="diff-line-num new_line old" data-linenumber="828" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC828" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">metastudent</span></span>
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<td class="diff-line-num new old_line" data-linenumber="829" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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828
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<pre style="margin: 0;">+<span id="LC828" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">metastudent</span></span>
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829
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829
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<pre style="margin: 0;"> <span id="LC829" class="line" lang="mosel"></span>
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<td class="diff-line-num old_line" data-linenumber="830" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
830
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<td class="diff-line-num new_line" data-linenumber="830" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
830
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<pre style="margin: 0;"> <span id="LC830" class="line" lang="mosel"><span class="n" style="color: #333;">Suggests</span><span class="p">:</span> <span class="n" style="color: #333;">metastudent</span><span class="p">-</span><span class="n" style="color: #333;">data</span><span class="p">,</span> <span class="n" style="color: #333;">metastudent</span><span class="p">-</span><span class="n" style="color: #333;">data</span><span class="p">-</span><span class="m" style="color: #099;">2</span></span>
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<td class="diff-line-num old_line" data-linenumber="831" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
831
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831
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<pre style="margin: 0;"> <span id="LC831" class="line" lang="mosel"></span>
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<td class="diff-line-num old old_line" data-linenumber="832" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
832
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<td class="diff-line-num new_line old" data-linenumber="832" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC832" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">microbegps</span></span>
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<td class="diff-line-num new old_line" data-linenumber="833" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="832" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
832
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<pre style="margin: 0;">+<span id="LC832" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">microbegps</span></span>
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833
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833
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<pre style="margin: 0;"> <span id="LC833" class="line" lang="mosel"></span>
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<td class="diff-line-num old old_line" data-linenumber="834" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
834
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<td class="diff-line-num new_line old" data-linenumber="834" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC834" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">mindthegap</span></span>
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<td class="diff-line-num new old_line" data-linenumber="835" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="834" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
834
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<pre style="margin: 0;">+<span id="LC834" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">mindthegap</span></span>
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835
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835
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<pre style="margin: 0;"> <span id="LC835" class="line" lang="mosel"></span>
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<td class="diff-line-num old old_line" data-linenumber="836" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
836
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<td class="diff-line-num new_line old" data-linenumber="836" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC836" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">miniasm</span></span>
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<td class="diff-line-num new new_line" data-linenumber="836" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
836
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<pre style="margin: 0;">+<span id="LC836" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">miniasm</span></span>
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837
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<td class="diff-line-num new_line" data-linenumber="837" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
837
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<pre style="margin: 0;"> <span id="LC837" class="line" lang="mosel"></span>
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<td class="diff-line-num old old_line" data-linenumber="838" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
838
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<td class="diff-line-num new_line old" data-linenumber="838" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC838" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">minimac4</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="839" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="838" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
838
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<pre style="margin: 0;">+<span id="LC838" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">minimac4</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="839" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
839
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<td class="diff-line-num new_line" data-linenumber="839" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
839
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<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC839" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="840" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
840
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<td class="diff-line-num new_line old" data-linenumber="840" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC840" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">minimap</span><span class="p">,</span> <span class="n" style="color: #333;">minimap2</span></span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="840" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
840
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<pre style="margin: 0;">+<span id="LC840" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">minimap</span><span class="p">,</span> <span class="n" style="color: #333;">minimap2</span></span>
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841
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841
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<pre style="margin: 0;"> <span id="LC841" class="line" lang="mosel"></span>
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842
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<pre style="margin: 0;">-<span id="LC842" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">mirtop</span></span>
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842
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<pre style="margin: 0;">+<span id="LC842" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">mirtop</span></span>
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843
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843
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<pre style="margin: 0;"> <span id="LC843" class="line" lang="mosel"></span>
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844
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<pre style="margin: 0;">-<span id="LC844" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">molekel</span></span>
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844
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<pre style="margin: 0;">+<span id="LC844" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">molekel</span></span>
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845
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845
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<pre style="margin: 0;"> <span id="LC845" class="line" lang="mosel"></span>
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846
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<td class="diff-line-num new_line old" data-linenumber="846" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC846" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">mosaik</span><span class="p">-</span><span class="n" style="color: #333;">aligner</span></span>
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846
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<pre style="margin: 0;">+<span id="LC846" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">mosaik</span><span class="p">-</span><span class="n" style="color: #333;">aligner</span></span>
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847
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847
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<pre style="margin: 0;"> <span id="LC847" class="line" lang="mosel"></span>
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848
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<td class="diff-line-num new_line old" data-linenumber="848" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC848" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">mosdepth</span></span>
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848
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<pre style="margin: 0;">+<span id="LC848" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">mosdepth</span></span>
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849
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849
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<pre style="margin: 0;"> <span id="LC849" class="line" lang="mosel"></span>
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850
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<pre style="margin: 0;">-<span id="LC850" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">mmseqs2</span></span>
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850
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<pre style="margin: 0;">+<span id="LC850" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">mmseqs2</span></span>
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851
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851
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<pre style="margin: 0;"> <span id="LC851" class="line" lang="mosel"></span>
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852
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<pre style="margin: 0;">-<span id="LC852" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">mpsqed</span></span>
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852
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<pre style="margin: 0;">+<span id="LC852" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">mpsqed</span></span>
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853
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853
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<pre style="margin: 0;"> <span id="LC853" class="line" lang="mosel"></span>
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854
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854
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<pre style="margin: 0;"> <span id="LC854" class="line" lang="mosel"><span class="n" style="color: #333;">Suggests</span><span class="p">:</span> <span class="n" style="color: #333;">mrs</span></span>
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855
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855
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<pre style="margin: 0;"> <span id="LC855" class="line" lang="mosel"><span class="n" style="color: #333;">Remark</span><span class="p">:</span> <span class="n" style="color: #333;">mrs</span> <span class="n" style="color: #333;">might</span> <span class="n" style="color: #333;">occupy</span> <span class="n" style="color: #333;">a</span> <span class="n" style="color: #333;">lot</span> <span class="k" style="font-weight: 600;">of</span> <span class="n" style="color: #333;">space</span> <span class="n" style="color: #333;">on</span> <span class="n" style="color: #333;">users</span> <span class="n" style="color: #333;">disk</span> <span class="p">-</span> <span class="n" style="color: #333;">so</span> <span class="n" style="color: #333;">you</span> <span class="n" style="color: #333;">want</span> <span class="k" style="font-weight: 600;">to</span> <span class="n" style="color: #333;">avoid</span> <span class="n" style="color: #333;">this</span> <span class="k" style="font-weight: 600;">package</span> <span class="k" style="font-weight: 600;">from</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">metapackage</span> <span class="n" style="color: #333;">recommends</span></span>
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856
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856
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<pre style="margin: 0;"> <span id="LC856" class="line" lang="mosel"></span>
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857
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<pre style="margin: 0;">-<span id="LC857" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">mptp</span></span>
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857
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<pre style="margin: 0;">+<span id="LC857" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">mptp</span></span>
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858
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858
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<pre style="margin: 0;"> <span id="LC858" class="line" lang="mosel"></span>
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859
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<td class="diff-line-num new_line old" data-linenumber="859" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC859" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">mugsy</span></span>
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859
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<pre style="margin: 0;">+<span id="LC859" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">mugsy</span></span>
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860
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860
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<pre style="margin: 0;"> <span id="LC860" class="line" lang="mosel"></span>
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861
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<td class="diff-line-num new_line old" data-linenumber="861" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC861" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">multiqc</span></span>
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861
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<pre style="margin: 0;">+<span id="LC861" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">multiqc</span></span>
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862
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862
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<pre style="margin: 0;"> <span id="LC862" class="line" lang="mosel"></span>
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863
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<td class="diff-line-num new_line old" data-linenumber="863" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC863" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">murasaki</span> <span class="p">|</span> <span class="n" style="color: #333;">murasaki</span><span class="p">-</span><span class="n" style="color: #333;">mpi</span></span>
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863
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<pre style="margin: 0;">+<span id="LC863" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">murasaki</span> <span class="p">|</span> <span class="n" style="color: #333;">murasaki</span><span class="p">-</span><span class="n" style="color: #333;">mpi</span></span>
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864
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864
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<pre style="margin: 0;"> <span id="LC864" class="line" lang="mosel"></span>
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865
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<td class="diff-line-num new_line old" data-linenumber="865" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC865" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">mview</span></span>
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865
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<pre style="margin: 0;">+<span id="LC865" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">mview</span></span>
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866
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866
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<pre style="margin: 0;"> <span id="LC866" class="line" lang="mosel"></span>
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<td class="diff-line-num old old_line" data-linenumber="867" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
867
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<td class="diff-line-num new_line old" data-linenumber="867" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC867" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">nanocall</span></span>
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867
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<pre style="margin: 0;">+<span id="LC867" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">nanocall</span></span>
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868
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868
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<pre style="margin: 0;"> <span id="LC868" class="line" lang="mosel"></span>
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869
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<td class="diff-line-num new_line old" data-linenumber="869" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC869" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">nanook</span></span>
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869
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<pre style="margin: 0;">+<span id="LC869" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">nanook</span></span>
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870
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870
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<pre style="margin: 0;"> <span id="LC870" class="line" lang="mosel"></span>
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871
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<td class="diff-line-num new_line old" data-linenumber="871" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC871" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">nanopolish</span></span>
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871
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<pre style="margin: 0;">+<span id="LC871" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">nanopolish</span></span>
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872
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872
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<pre style="margin: 0;"> <span id="LC872" class="line" lang="mosel"></span>
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873
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<pre style="margin: 0;">-<span id="LC873" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">nanolyse</span></span>
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873
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<pre style="margin: 0;">+<span id="LC873" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">nanolyse</span></span>
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874
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874
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<pre style="margin: 0;"> <span id="LC874" class="line" lang="mosel"></span>
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875
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<pre style="margin: 0;">-<span id="LC875" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">nanofilt</span></span>
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875
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<pre style="margin: 0;">+<span id="LC875" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">nanofilt</span></span>
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876
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876
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<pre style="margin: 0;"> <span id="LC876" class="line" lang="mosel"></span>
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877
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<td class="diff-line-num new_line old" data-linenumber="877" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC877" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">nanoplot</span></span>
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877
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<pre style="margin: 0;">+<span id="LC877" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">nanoplot</span></span>
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878
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878
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<pre style="margin: 0;"> <span id="LC878" class="line" lang="mosel"></span>
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879
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<pre style="margin: 0;">-<span id="LC879" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">nanosv</span></span>
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879
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<pre style="margin: 0;">+<span id="LC879" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">nanosv</span></span>
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880
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880
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<pre style="margin: 0;"> <span id="LC880" class="line" lang="mosel"></span>
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881
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<pre style="margin: 0;">-<span id="LC881" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">ncbi</span><span class="p">-</span><span class="n" style="color: #333;">acc</span><span class="p">-</span><span class="n" style="color: #333;">download</span></span>
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881
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<pre style="margin: 0;">+<span id="LC881" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">ncbi</span><span class="p">-</span><span class="n" style="color: #333;">acc</span><span class="p">-</span><span class="n" style="color: #333;">download</span></span>
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882
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882
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<pre style="margin: 0;"> <span id="LC882" class="line" lang="mosel"></span>
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883
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<pre style="margin: 0;">-<span id="LC883" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">ncbi</span><span class="p">-</span><span class="n" style="color: #333;">entrez</span><span class="p">-</span><span class="n" style="color: #333;">direct</span></span>
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883
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<pre style="margin: 0;">+<span id="LC883" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">ncbi</span><span class="p">-</span><span class="n" style="color: #333;">entrez</span><span class="p">-</span><span class="n" style="color: #333;">direct</span></span>
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884
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884
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<pre style="margin: 0;"> <span id="LC884" class="line" lang="mosel"></span>
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885
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<td class="diff-line-num new_line old" data-linenumber="885" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC885" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">ncbi</span><span class="p">-</span><span class="n" style="color: #333;">magicblast</span></span>
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885
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<pre style="margin: 0;">+<span id="LC885" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">ncbi</span><span class="p">-</span><span class="n" style="color: #333;">magicblast</span></span>
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886
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886
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<pre style="margin: 0;"> <span id="LC886" class="line" lang="mosel"></span>
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887
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<td class="diff-line-num new_line old" data-linenumber="887" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC887" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">ncbi</span><span class="p">-</span><span class="n" style="color: #333;">seg</span></span>
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887
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<pre style="margin: 0;">+<span id="LC887" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">ncbi</span><span class="p">-</span><span class="n" style="color: #333;">seg</span></span>
</pre>
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888
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888
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<pre style="margin: 0;"> <span id="LC888" class="line" lang="mosel"></span>
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889
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<pre style="margin: 0;">-<span id="LC889" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">nextsv</span></span>
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889
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<pre style="margin: 0;">+<span id="LC889" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">nextsv</span></span>
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890
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890
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<pre style="margin: 0;"> <span id="LC890" class="line" lang="mosel"></span>
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891
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<td class="diff-line-num new_line old" data-linenumber="891" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC891" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">ngila</span></span>
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891
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<pre style="margin: 0;">+<span id="LC891" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">ngila</span></span>
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892
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892
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<pre style="margin: 0;"> <span id="LC892" class="line" lang="mosel"></span>
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893
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<td class="diff-line-num new_line old" data-linenumber="893" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC893" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">ngmlr</span></span>
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893
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<pre style="margin: 0;">+<span id="LC893" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">ngmlr</span></span>
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894
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894
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<pre style="margin: 0;"> <span id="LC894" class="line" lang="mosel"></span>
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<td class="diff-line-num old old_line" data-linenumber="895" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
895
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<td class="diff-line-num new_line old" data-linenumber="895" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC895" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">ngsqctoolkit</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="896" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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895
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<pre style="margin: 0;">+<span id="LC895" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">ngsqctoolkit</span></span>
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896
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896
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<pre style="margin: 0;"> <span id="LC896" class="line" lang="mosel"></span>
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897
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<td class="diff-line-num new_line old" data-linenumber="897" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC897" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">nw</span><span class="p">-</span><span class="n" style="color: #333;">align</span></span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="897" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
897
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<pre style="margin: 0;">+<span id="LC897" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">nw</span><span class="p">-</span><span class="n" style="color: #333;">align</span></span>
</pre>
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898
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898
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<pre style="margin: 0;"> <span id="LC898" class="line" lang="mosel"></span>
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<td class="diff-line-num old old_line" data-linenumber="899" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
899
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<td class="diff-line-num new_line old" data-linenumber="899" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC899" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">oases</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="900" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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899
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<pre style="margin: 0;">+<span id="LC899" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">oases</span></span>
</pre>
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900
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900
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<pre style="margin: 0;"> <span id="LC900" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="901" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
901
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<td class="diff-line-num new_line old" data-linenumber="901" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC901" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">obitools</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="902" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="901" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
901
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<pre style="margin: 0;">+<span id="LC901" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">obitools</span></span>
</pre>
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902
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902
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<pre style="margin: 0;"> <span id="LC902" class="line" lang="mosel"></span>
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<td class="diff-line-num old old_line" data-linenumber="903" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
903
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<td class="diff-line-num new_line old" data-linenumber="903" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC903" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">oncofuse</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="904" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="903" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
903
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<pre style="margin: 0;">+<span id="LC903" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">oncofuse</span></span>
</pre>
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904
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904
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<pre style="margin: 0;"> <span id="LC904" class="line" lang="mosel"></span>
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905
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<td class="diff-line-num new_line old" data-linenumber="905" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC905" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">optimir</span></span>
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905
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<pre style="margin: 0;">+<span id="LC905" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">optimir</span></span>
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906
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906
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<pre style="margin: 0;"> <span id="LC906" class="line" lang="mosel"></span>
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<td class="diff-line-num old old_line" data-linenumber="907" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
907
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<td class="diff-line-num new_line old" data-linenumber="907" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC907" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">optitype</span></span>
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<td class="diff-line-num new old_line" data-linenumber="908" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="907" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
907
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<pre style="margin: 0;">+<span id="LC907" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">optitype</span></span>
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908
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908
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<pre style="margin: 0;"> <span id="LC908" class="line" lang="mosel"></span>
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<td class="diff-line-num old old_line" data-linenumber="909" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
909
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<td class="diff-line-num new_line old" data-linenumber="909" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC909" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">paipline</span></span>
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<td class="diff-line-num new old_line" data-linenumber="910" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="909" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
909
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<pre style="margin: 0;">+<span id="LC909" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">paipline</span></span>
</pre>
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910
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910
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<pre style="margin: 0;"> <span id="LC910" class="line" lang="mosel"></span>
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<td class="diff-line-num old old_line" data-linenumber="911" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
911
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<td class="diff-line-num new_line old" data-linenumber="911" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC911" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">python3</span><span class="p">-</span><span class="n" style="color: #333;">pairtools</span></span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="911" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
911
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<pre style="margin: 0;">+<span id="LC911" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">python3</span><span class="p">-</span><span class="n" style="color: #333;">pairtools</span></span>
</pre>
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912
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912
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<pre style="margin: 0;"> <span id="LC912" class="line" lang="mosel"></span>
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<td class="diff-line-num old old_line" data-linenumber="913" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
913
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<td class="diff-line-num new_line old" data-linenumber="913" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC913" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">pal2nal</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="914" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="913" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
913
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<pre style="margin: 0;">+<span id="LC913" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">pal2nal</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="914" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
914
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<td class="diff-line-num new_line" data-linenumber="914" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
914
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<pre style="margin: 0;"> <span id="LC914" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="915" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
915
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<td class="diff-line-num new_line old" data-linenumber="915" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC915" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">paleomix</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="916" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="915" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
915
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<pre style="margin: 0;">+<span id="LC915" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">paleomix</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="916" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
916
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<td class="diff-line-num new_line" data-linenumber="916" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
916
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<pre style="margin: 0;"> <span id="LC916" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="917" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
917
</td>
<td class="diff-line-num new_line old" data-linenumber="917" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC917" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">paraclu</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="918" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="917" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
917
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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC917" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">paraclu</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="918" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
918
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<td class="diff-line-num new_line" data-linenumber="918" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
918
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<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC918" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="919" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
919
</td>
<td class="diff-line-num new_line old" data-linenumber="919" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
</td>
<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC919" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">parasail</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="920" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="919" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
919
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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC919" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">parasail</span></span>
</pre>
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920
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920
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<pre style="margin: 0;"> <span id="LC920" class="line" lang="mosel"></span>
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921
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<td class="diff-line-num new_line old" data-linenumber="921" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC921" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">parsinsert</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="922" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="921" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
921
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<pre style="margin: 0;">+<span id="LC921" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">parsinsert</span></span>
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922
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922
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<pre style="margin: 0;"> <span id="LC922" class="line" lang="mosel"></span>
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<td class="diff-line-num old old_line" data-linenumber="923" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
923
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<td class="diff-line-num new_line old" data-linenumber="923" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC923" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">parsnp</span></span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="923" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
923
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<pre style="margin: 0;">+<span id="LC923" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">parsnp</span></span>
</pre>
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924
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<td class="diff-line-num new_line" data-linenumber="924" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
924
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<pre style="margin: 0;"> <span id="LC924" class="line" lang="mosel"></span>
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<td class="diff-line-num old old_line" data-linenumber="925" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
925
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<td class="diff-line-num new_line old" data-linenumber="925" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC925" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">partitionfinder</span></span>
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<td class="diff-line-num new old_line" data-linenumber="926" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="925" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
925
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<pre style="margin: 0;">+<span id="LC925" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">partitionfinder</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="926" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
926
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<td class="diff-line-num new_line" data-linenumber="926" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
926
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<pre style="margin: 0;"> <span id="LC926" class="line" lang="mosel"></span>
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<td class="diff-line-num old old_line" data-linenumber="927" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
927
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<td class="diff-line-num new_line old" data-linenumber="927" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC927" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">patman</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="928" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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927
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<pre style="margin: 0;">+<span id="LC927" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">patman</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="928" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
928
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<td class="diff-line-num new_line" data-linenumber="928" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
928
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<pre style="margin: 0;"> <span id="LC928" class="line" lang="mosel"></span>
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<td class="diff-line-num old old_line" data-linenumber="929" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
929
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<td class="diff-line-num new_line old" data-linenumber="929" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC929" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">patristic</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="930" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="929" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
929
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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC929" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">patristic</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="930" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
930
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<td class="diff-line-num new_line" data-linenumber="930" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
930
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<pre style="margin: 0;"> <span id="LC930" class="line" lang="mosel"><span class="n" style="color: #333;">Language</span><span class="p">:</span> <span class="n" style="color: #333;">Java</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="931" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
931
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<td class="diff-line-num new_line" data-linenumber="931" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
931
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<pre style="margin: 0;"> <span id="LC931" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="932" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
932
</td>
<td class="diff-line-num new_line old" data-linenumber="932" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC932" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">pbdagcon</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="933" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="932" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
932
</td>
<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC932" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">pbdagcon</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="933" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
933
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<td class="diff-line-num new_line" data-linenumber="933" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
933
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<pre style="margin: 0;"> <span id="LC933" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="934" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
934
</td>
<td class="diff-line-num new_line old" data-linenumber="934" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC934" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">pbsuite</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="935" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
</td>
<td class="diff-line-num new new_line" data-linenumber="934" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
934
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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC934" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">pbsuite</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="935" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
935
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<td class="diff-line-num new_line" data-linenumber="935" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
935
</td>
<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC935" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="936" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
936
</td>
<td class="diff-line-num new_line old" data-linenumber="936" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC936" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">pbgenomicconsensus</span></span>
</pre>
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936
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<pre style="margin: 0;">+<span id="LC936" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">pbgenomicconsensus</span></span>
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937
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937
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<pre style="margin: 0;"> <span id="LC937" class="line" lang="mosel"></span>
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938
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<td class="diff-line-num new_line old" data-linenumber="938" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC938" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">pbjelly</span><span class="p">,</span> <span class="n" style="color: #333;">pbhoney</span></span>
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<td class="diff-line-num new old_line" data-linenumber="939" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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938
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<pre style="margin: 0;">+<span id="LC938" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">pbjelly</span><span class="p">,</span> <span class="n" style="color: #333;">pbhoney</span></span>
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939
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939
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<pre style="margin: 0;"> <span id="LC939" class="line" lang="mosel"></span>
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940
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<td class="diff-line-num new_line old" data-linenumber="940" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC940" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">pbsim</span></span>
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940
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<pre style="margin: 0;">+<span id="LC940" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">pbsim</span></span>
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941
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941
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<pre style="margin: 0;"> <span id="LC941" class="line" lang="mosel"></span>
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942
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<td class="diff-line-num new_line old" data-linenumber="942" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC942" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">pcma</span></span>
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942
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<pre style="margin: 0;">+<span id="LC942" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">pcma</span></span>
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943
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<td class="diff-line-num new_line" data-linenumber="943" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
943
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<pre style="margin: 0;"> <span id="LC943" class="line" lang="mosel"><span class="n" style="color: #333;">Remark</span><span class="p">:</span> <span class="n" style="color: #333;">Precondition</span> <span class="n" style="color: #333;">for</span> <span class="n" style="color: #333;">T</span><span class="p">-</span><span class="n" style="color: #333;">Coffee</span></span>
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944
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944
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<pre style="margin: 0;"> <span id="LC944" class="line" lang="mosel"> <span class="n" style="color: #333;">see</span> <span class="n" style="color: #333;">http</span><span class="p">://</span><span class="n" style="color: #333;">wiki</span><span class="p">.</span><span class="n" style="color: #333;">debian</span><span class="p">.</span><span class="n" style="color: #333;">org</span><span class="p">/</span><span class="n" style="color: #333;">DebianMed</span><span class="p">/</span><span class="n" style="color: #333;">TCoffee</span></span>
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945
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945
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<pre style="margin: 0;"> <span id="LC945" class="line" lang="mosel"> <span class="p">.</span></span>
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<td class="diff-line-num old_line" data-linenumber="946" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
946
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<td class="diff-line-num new_line" data-linenumber="946" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
946
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<pre style="margin: 0;"> <span id="LC946" class="line" lang="mosel"> <span class="n" style="color: #333;">Check</span> <span class="k" style="font-weight: 600;">with</span> <span class="n" style="color: #333;">authors</span> <span class="n" style="color: #333;">about</span> <span class="n" style="color: #333;">licensing</span><span class="p">,</span> <span class="n" style="color: #333;">they</span> <span class="n" style="color: #333;">adopted</span> <span class="n" style="color: #333;">code</span> <span class="k" style="font-weight: 600;">from</span> <span class="n" style="color: #333;">clustalw</span> <span class="n" style="color: #333;">which</span> <span class="n" style="color: #333;">is</span> <span class="n" style="color: #333;">now</span></span>
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947
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<td class="diff-line-num new_line" data-linenumber="947" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
947
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<pre style="margin: 0;"> <span id="LC947" class="line" lang="mosel"> <span class="n" style="color: #333;">free</span><span class="p">.</span> <span class="n" style="color: #333;">Thus</span> <span class="n" style="color: #333;">a</span> <span class="n" style="color: #333;">change</span> <span class="n" style="color: #333;">might</span> <span class="n" style="color: #333;">be</span> <span class="n" style="color: #333;">possible</span></span>
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948
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948
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<pre style="margin: 0;"> <span id="LC948" class="line" lang="mosel"></span>
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949
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<td class="diff-line-num new_line old" data-linenumber="949" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC949" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">perm</span></span>
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949
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<pre style="margin: 0;">+<span id="LC949" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">perm</span></span>
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950
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950
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<pre style="margin: 0;"> <span id="LC950" class="line" lang="mosel"></span>
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951
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<pre style="margin: 0;">-<span id="LC951" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">pftools</span></span>
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951
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<pre style="margin: 0;">+<span id="LC951" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">pftools</span></span>
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952
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952
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<pre style="margin: 0;"> <span id="LC952" class="line" lang="mosel"></span>
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953
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<pre style="margin: 0;">-<span id="LC953" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">phast</span></span>
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953
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<pre style="margin: 0;">+<span id="LC953" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">phast</span></span>
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954
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954
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<pre style="margin: 0;"> <span id="LC954" class="line" lang="mosel"></span>
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955
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<td class="diff-line-num new_line old" data-linenumber="955" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC955" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">phipack</span></span>
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955
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<pre style="margin: 0;">+<span id="LC955" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">phipack</span></span>
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956
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956
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<pre style="margin: 0;"> <span id="LC956" class="line" lang="mosel"></span>
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957
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<td class="diff-line-num new_line old" data-linenumber="957" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC957" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">phybin</span></span>
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<td class="diff-line-num new new_line" data-linenumber="957" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
957
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<pre style="margin: 0;">+<span id="LC957" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">phybin</span></span>
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958
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958
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<pre style="margin: 0;"> <span id="LC958" class="line" lang="mosel"></span>
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959
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<td class="diff-line-num new_line old" data-linenumber="959" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC959" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">phylophlan</span></span>
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<td class="diff-line-num new new_line" data-linenumber="959" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
959
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<pre style="margin: 0;">+<span id="LC959" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">phylophlan</span></span>
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960
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<td class="diff-line-num new_line" data-linenumber="960" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
960
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<pre style="margin: 0;"> <span id="LC960" class="line" lang="mosel"><span class="n" style="color: #333;">Remark</span><span class="p">:</span> <span class="n" style="color: #333;">usearch</span> <span class="n" style="color: #333;">can</span> <span class="k" style="font-weight: 600;">not</span> <span class="n" style="color: #333;">be</span> <span class="n" style="color: #333;">replaced</span> <span class="n" style="color: #333;">since</span> <span class="n" style="color: #333;">vsearch</span> <span class="n" style="color: #333;">does</span> <span class="k" style="font-weight: 600;">not</span> <span class="n" style="color: #333;">work</span> <span class="k" style="font-weight: 600;">with</span> <span class="n" style="color: #333;">proteins</span></span>
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961
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961
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<pre style="margin: 0;"> <span id="LC961" class="line" lang="mosel"> <span class="n" style="color: #333;">See</span> <span class="n" style="color: #333;">https</span><span class="p">://</span><span class="n" style="color: #333;">lists</span><span class="p">.</span><span class="n" style="color: #333;">debian</span><span class="p">.</span><span class="n" style="color: #333;">org</span><span class="p">/</span><span class="n" style="color: #333;">debian</span><span class="p">-</span><span class="n" style="color: #333;">med</span><span class="p">/</span><span class="m" style="color: #099;">2016</span><span class="p">/</span><span class="m" style="color: #099;">05</span><span class="p">/</span><span class="n" style="color: #333;">msg00091</span><span class="p">.</span><span class="n" style="color: #333;">html</span></span>
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962
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962
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<pre style="margin: 0;"> <span id="LC962" class="line" lang="mosel"></span>
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<td class="diff-line-num old old_line" data-linenumber="963" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
963
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<td class="diff-line-num new_line old" data-linenumber="963" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC963" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">phyloviz</span><span class="p">-</span><span class="n" style="color: #333;">core</span></span>
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<td class="diff-line-num new old_line" data-linenumber="964" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="963" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
963
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<pre style="margin: 0;">+<span id="LC963" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">phyloviz</span><span class="p">-</span><span class="n" style="color: #333;">core</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="964" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
964
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<td class="diff-line-num new_line" data-linenumber="964" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
964
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<pre style="margin: 0;"> <span id="LC964" class="line" lang="mosel"><span class="n" style="color: #333;">Remark</span><span class="p">:</span> <span class="n" style="color: #333;">There</span> <span class="n" style="color: #333;">are</span> <span class="n" style="color: #333;">several</span> <span class="n" style="color: #333;">plugins</span> <span class="k" style="font-weight: 600;">to</span> <span class="k" style="font-weight: 600;">package</span></span>
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<td class="diff-line-num old_line" data-linenumber="965" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
965
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<td class="diff-line-num new_line" data-linenumber="965" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
965
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<pre style="margin: 0;"> <span id="LC965" class="line" lang="mosel"> <span class="n" style="color: #333;">The</span> <span class="n" style="color: #333;">download</span> <span class="n" style="color: #333;">page</span> <span class="n" style="color: #333;">http</span><span class="p">://</span><span class="n" style="color: #333;">www</span><span class="p">.</span><span class="n" style="color: #333;">phyloviz</span><span class="p">.</span><span class="n" style="color: #333;">net</span><span class="p">/</span><span class="n" style="color: #333;">wiki</span><span class="p">/</span><span class="n" style="color: #333;">plugins</span><span class="p">/</span> <span class="n" style="color: #333;">lists</span> <span class="n" style="color: #333;">several</span> <span class="n" style="color: #333;">plugins</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="966" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
966
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<td class="diff-line-num new_line" data-linenumber="966" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
966
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<pre style="margin: 0;"> <span id="LC966" class="line" lang="mosel"> <span class="n" style="color: #333;">that</span> <span class="n" style="color: #333;">should</span> <span class="n" style="color: #333;">be</span> <span class="n" style="color: #333;">packaged</span> <span class="p">(</span><span class="n" style="color: #333;">single</span> <span class="k" style="font-weight: 600;">or</span> <span class="k" style="font-weight: 600;">as</span> <span class="n" style="color: #333;">bundle</span><span class="p">)</span> <span class="k" style="font-weight: 600;">as</span> <span class="n" style="color: #333;">well</span><span class="p">.</span></span>
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967
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967
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<pre style="margin: 0;"> <span id="LC967" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="968" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
968
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<td class="diff-line-num new_line old" data-linenumber="968" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC968" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">phyutility</span></span>
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<td class="diff-line-num new old_line" data-linenumber="969" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="968" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
968
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<pre style="margin: 0;">+<span id="LC968" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">phyutility</span></span>
</pre>
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969
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969
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<pre style="margin: 0;"> <span id="LC969" class="line" lang="mosel"></span>
</pre>
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970
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<td class="diff-line-num new_line old" data-linenumber="970" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC970" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">phyx</span></span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="970" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
970
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<pre style="margin: 0;">+<span id="LC970" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">phyx</span></span>
</pre>
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971
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971
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<pre style="margin: 0;"> <span id="LC971" class="line" lang="mosel"></span>
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972
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<td class="diff-line-num new_line old" data-linenumber="972" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC972" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">physamp</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="973" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="972" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
972
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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC972" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">physamp</span></span>
</pre>
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973
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<td class="diff-line-num new_line" data-linenumber="973" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
973
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<pre style="margin: 0;"> <span id="LC973" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="974" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
974
</td>
<td class="diff-line-num new_line old" data-linenumber="974" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC974" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">picopore</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="975" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="974" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
974
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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC974" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">picopore</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="975" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
975
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975
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<pre style="margin: 0;"> <span id="LC975" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="976" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
976
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<td class="diff-line-num new_line old" data-linenumber="976" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC976" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">piler</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="977" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="976" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
976
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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC976" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">piler</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="977" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
977
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977
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<pre style="margin: 0;"> <span id="LC977" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="978" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
978
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<td class="diff-line-num new_line old" data-linenumber="978" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC978" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">pilercr</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="979" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="978" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
978
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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC978" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">pilercr</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="979" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
979
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<td class="diff-line-num new_line" data-linenumber="979" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
979
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<pre style="margin: 0;"> <span id="LC979" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="980" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
980
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<td class="diff-line-num new_line old" data-linenumber="980" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC980" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">pilon</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="981" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="980" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
980
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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC980" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">pilon</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="981" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
981
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<td class="diff-line-num new_line" data-linenumber="981" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
981
</td>
<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC981" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="982" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
982
</td>
<td class="diff-line-num new_line old" data-linenumber="982" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
</td>
<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC982" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">pipasic</span><span class="p">,</span> <span class="n" style="color: #333;">inspect</span><span class="p">,</span> <span class="n" style="color: #333;">tide</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="983" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
</td>
<td class="diff-line-num new new_line" data-linenumber="982" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
982
</td>
<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC982" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">pipasic</span><span class="p">,</span> <span class="n" style="color: #333;">inspect</span><span class="p">,</span> <span class="n" style="color: #333;">tide</span></span>
</pre>
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</tr>
<tr class="line_holder" id="" style="line-height: 1.6;">
<td class="diff-line-num old_line" data-linenumber="983" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
983
</td>
<td class="diff-line-num new_line" data-linenumber="983" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
983
</td>
<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC983" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="984" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
984
</td>
<td class="diff-line-num new_line old" data-linenumber="984" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
</td>
<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC984" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">pirs</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="985" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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984
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<pre style="margin: 0;">+<span id="LC984" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">pirs</span></span>
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985
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985
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<pre style="margin: 0;"> <span id="LC985" class="line" lang="mosel"></span>
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986
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<pre style="margin: 0;">-<span id="LC986" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">placnet</span></span>
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986
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<pre style="margin: 0;">+<span id="LC986" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">placnet</span></span>
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987
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987
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<pre style="margin: 0;"> <span id="LC987" class="line" lang="mosel"></span>
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988
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<pre style="margin: 0;">-<span id="LC988" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">plasmidid</span></span>
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988
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<pre style="margin: 0;">+<span id="LC988" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">plasmidid</span></span>
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989
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989
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<pre style="margin: 0;"> <span id="LC989" class="line" lang="mosel"></span>
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990
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<pre style="margin: 0;">-<span id="LC990" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">plasmidseeker</span></span>
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990
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<pre style="margin: 0;">+<span id="LC990" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">plasmidseeker</span></span>
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991
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991
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<pre style="margin: 0;"> <span id="LC991" class="line" lang="mosel"></span>
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992
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<pre style="margin: 0;">-<span id="LC992" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">plato</span></span>
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992
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<pre style="margin: 0;">+<span id="LC992" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">plato</span></span>
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993
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<pre style="margin: 0;"> <span id="LC993" class="line" lang="mosel"></span>
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994
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<pre style="margin: 0;">-<span id="LC994" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">plip</span></span>
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994
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<pre style="margin: 0;">+<span id="LC994" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">plip</span></span>
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995
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995
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<pre style="margin: 0;"> <span id="LC995" class="line" lang="mosel"></span>
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996
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<pre style="margin: 0;">-<span id="LC996" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">pomoxis</span></span>
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996
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<pre style="margin: 0;">+<span id="LC996" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">pomoxis</span></span>
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997
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997
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<pre style="margin: 0;"> <span id="LC997" class="line" lang="mosel"></span>
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998
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<pre style="margin: 0;">-<span id="LC998" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">poretools</span></span>
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998
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<pre style="margin: 0;">+<span id="LC998" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">poretools</span></span>
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999
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<pre style="margin: 0;"> <span id="LC999" class="line" lang="mosel"></span>
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1000
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<pre style="margin: 0;">-<span id="LC1000" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">porechop</span></span>
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1000
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<pre style="margin: 0;">+<span id="LC1000" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">porechop</span></span>
</pre>
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1001
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<td class="diff-line-num new_line" data-linenumber="1001" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1001
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<pre style="margin: 0;"> <span id="LC1001" class="line" lang="mosel"></span>
</pre>
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1002
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<td class="diff-line-num new_line old" data-linenumber="1002" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC1002" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">pplacer</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="1003" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="1002" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1002
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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC1002" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">pplacer</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1003" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1003
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<td class="diff-line-num new_line" data-linenumber="1003" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1003
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<pre style="margin: 0;"> <span id="LC1003" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="1004" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1004
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<td class="diff-line-num new_line old" data-linenumber="1004" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC1004" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">prank</span></span>
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<td class="diff-line-num new old_line" data-linenumber="1005" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="1004" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1004
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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC1004" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">prank</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1005" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1005
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<td class="diff-line-num new_line" data-linenumber="1005" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1005
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<pre style="margin: 0;"> <span id="LC1005" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="1006" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1006
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<td class="diff-line-num new_line old" data-linenumber="1006" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC1006" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">predictprotein</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="1007" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="1006" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1006
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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC1006" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">predictprotein</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1007" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1007
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<td class="diff-line-num new_line" data-linenumber="1007" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1007
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<pre style="margin: 0;"> <span id="LC1007" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="1008" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1008
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<td class="diff-line-num new_line old" data-linenumber="1008" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC1008" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">proalign</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="1009" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="1008" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1008
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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC1008" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">proalign</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1009" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1009
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<td class="diff-line-num new_line" data-linenumber="1009" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1009
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<pre style="margin: 0;"> <span id="LC1009" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="1010" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1010
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<td class="diff-line-num new_line old" data-linenumber="1010" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC1010" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">prodigal</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="1011" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="1010" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1010
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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC1010" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">prodigal</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1011" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1011
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<td class="diff-line-num new_line" data-linenumber="1011" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1011
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<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC1011" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="1012" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1012
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<td class="diff-line-num new_line old" data-linenumber="1012" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC1012" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">prokka</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="1013" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="1012" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1012
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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC1012" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">prokka</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1013" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1013
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<td class="diff-line-num new_line" data-linenumber="1013" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1013
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<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC1013" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="1014" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1014
</td>
<td class="diff-line-num new_line old" data-linenumber="1014" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC1014" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">proteinortho</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="1015" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="1014" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1014
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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC1014" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">proteinortho</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1015" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1015
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<td class="diff-line-num new_line" data-linenumber="1015" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1015
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<pre style="margin: 0;"> <span id="LC1015" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="1016" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1016
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<td class="diff-line-num new_line old" data-linenumber="1016" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC1016" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">prottest</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="1017" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="1016" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1016
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<pre style="margin: 0;">+<span id="LC1016" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">prottest</span></span>
</pre>
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1017
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<td class="diff-line-num new_line" data-linenumber="1017" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1017
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<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC1017" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="1018" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1018
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<td class="diff-line-num new_line old" data-linenumber="1018" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC1018" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">psortb</span></span>
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<td class="diff-line-num new old_line" data-linenumber="1019" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="1018" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1018
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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC1018" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">psortb</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1019" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1019
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<td class="diff-line-num new_line" data-linenumber="1019" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1019
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<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC1019" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="1020" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1020
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<td class="diff-line-num new_line old" data-linenumber="1020" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC1020" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">pscan</span><span class="p">-</span><span class="n" style="color: #333;">tfbs</span><span class="p">,</span> <span class="n" style="color: #333;">pscan</span><span class="p">-</span><span class="n" style="color: #333;">chip</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="1021" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="1020" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1020
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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC1020" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">pscan</span><span class="p">-</span><span class="n" style="color: #333;">tfbs</span><span class="p">,</span> <span class="n" style="color: #333;">pscan</span><span class="p">-</span><span class="n" style="color: #333;">chip</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1021" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1021
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<td class="diff-line-num new_line" data-linenumber="1021" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1021
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<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC1021" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="1022" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1022
</td>
<td class="diff-line-num new_line old" data-linenumber="1022" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC1022" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">psipred</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="1023" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="1022" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1022
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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC1022" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">psipred</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1023" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1023
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<td class="diff-line-num new_line" data-linenumber="1023" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1023
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<pre style="margin: 0;"> <span id="LC1023" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="1024" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1024
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<td class="diff-line-num new_line old" data-linenumber="1024" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC1024" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">pssh2</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="1025" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="1024" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1024
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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC1024" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">pssh2</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1025" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1025
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<td class="diff-line-num new_line" data-linenumber="1025" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1025
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<pre style="margin: 0;"> <span id="LC1025" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1026" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1026
</td>
<td class="diff-line-num new_line" data-linenumber="1026" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1026
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<pre style="margin: 0;"> <span id="LC1026" class="line" lang="mosel"><span class="n" style="color: #333;">Recommends</span><span class="p">:</span> <span class="n" style="color: #333;">pufferfish</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1027" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1027
</td>
<td class="diff-line-num new_line" data-linenumber="1027" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1027
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<pre style="margin: 0;"> <span id="LC1027" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1028" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1028
</td>
<td class="diff-line-num new_line" data-linenumber="1028" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1028
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<pre style="margin: 0;"> <span id="LC1028" class="line" lang="mosel"><span class="n" style="color: #333;">Suggests</span><span class="p">:</span> <span class="n" style="color: #333;">python3</span><span class="p">-</span><span class="n" style="color: #333;">alignlib</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1029" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1029
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<td class="diff-line-num new_line" data-linenumber="1029" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1029
</td>
<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC1029" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="1030" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1030
</td>
<td class="diff-line-num new_line old" data-linenumber="1030" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC1030" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">python3</span><span class="p">-</span><span class="n" style="color: #333;">cogent</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="1031" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
</td>
<td class="diff-line-num new new_line" data-linenumber="1030" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1030
</td>
<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC1030" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">python3</span><span class="p">-</span><span class="n" style="color: #333;">cogent</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1031" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1031
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<td class="diff-line-num new_line" data-linenumber="1031" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1031
</td>
<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC1031" class="line" lang="mosel"></span>
</pre>
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<tr class="line_holder old" id="" style="line-height: 1.6;">
<td class="diff-line-num old old_line" data-linenumber="1032" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1032
</td>
<td class="diff-line-num new_line old" data-linenumber="1032" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
</td>
<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC1032" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">pycorrfit</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="1033" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
</td>
<td class="diff-line-num new new_line" data-linenumber="1032" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1032
</td>
<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC1032" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">pycorrfit</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1033" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1033
</td>
<td class="diff-line-num new_line" data-linenumber="1033" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1033
</td>
<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC1033" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="1034" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1034
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<td class="diff-line-num new_line old" data-linenumber="1034" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC1034" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">pyscanfcs</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="1035" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="1034" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1034
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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC1034" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">pyscanfcs</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1035" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1035
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<td class="diff-line-num new_line" data-linenumber="1035" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1035
</td>
<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC1035" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="1036" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1036
</td>
<td class="diff-line-num new_line old" data-linenumber="1036" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC1036" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">python3</span><span class="p">-</span><span class="n" style="color: #333;">deeptools</span><span class="p">,</span> <span class="n" style="color: #333;">python3</span><span class="p">-</span><span class="n" style="color: #333;">deeptoolsintervals</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="1037" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
</td>
<td class="diff-line-num new new_line" data-linenumber="1036" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1036
</td>
<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC1036" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">python3</span><span class="p">-</span><span class="n" style="color: #333;">deeptools</span><span class="p">,</span> <span class="n" style="color: #333;">python3</span><span class="p">-</span><span class="n" style="color: #333;">deeptoolsintervals</span></span>
</pre>
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<tr class="line_holder" id="" style="line-height: 1.6;">
<td class="diff-line-num old_line" data-linenumber="1037" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1037
</td>
<td class="diff-line-num new_line" data-linenumber="1037" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1037
</td>
<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC1037" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="1038" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1038
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<td class="diff-line-num new_line old" data-linenumber="1038" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC1038" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">python3</span><span class="p">-</span><span class="n" style="color: #333;">geneimpacts</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="1039" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="1038" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1038
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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC1038" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">python3</span><span class="p">-</span><span class="n" style="color: #333;">geneimpacts</span></span>
</pre>
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<tr class="line_holder" id="" style="line-height: 1.6;">
<td class="diff-line-num old_line" data-linenumber="1039" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1039
</td>
<td class="diff-line-num new_line" data-linenumber="1039" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1039
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<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC1039" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="1040" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1040
</td>
<td class="diff-line-num new_line old" data-linenumber="1040" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC1040" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">python3</span><span class="p">-</span><span class="n" style="color: #333;">gffutils</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="1041" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
</td>
<td class="diff-line-num new new_line" data-linenumber="1040" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1040
</td>
<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC1040" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">python3</span><span class="p">-</span><span class="n" style="color: #333;">gffutils</span></span>
</pre>
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<tr class="line_holder" id="" style="line-height: 1.6;">
<td class="diff-line-num old_line" data-linenumber="1041" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1041
</td>
<td class="diff-line-num new_line" data-linenumber="1041" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1041
</td>
<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC1041" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1042" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1042
</td>
<td class="diff-line-num new_line" data-linenumber="1042" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1042
</td>
<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC1042" class="line" lang="mosel"><span class="n" style="color: #333;">Suggests</span><span class="p">:</span> <span class="n" style="color: #333;">python3</span><span class="p">-</span><span class="n" style="color: #333;">loompy</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1043" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1043
</td>
<td class="diff-line-num new_line" data-linenumber="1043" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1043
</td>
<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC1043" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="1044" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1044
</td>
<td class="diff-line-num new_line old" data-linenumber="1044" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC1044" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">python3</span><span class="p">-</span><span class="n" style="color: #333;">pybel</span></span>
</pre>
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<tr class="line_holder new" id="" style="line-height: 1.6;">
<td class="diff-line-num new old_line" data-linenumber="1045" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
</td>
<td class="diff-line-num new new_line" data-linenumber="1044" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1044
</td>
<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC1044" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">python3</span><span class="p">-</span><span class="n" style="color: #333;">pybel</span></span>
</pre>
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<tr class="line_holder" id="" style="line-height: 1.6;">
<td class="diff-line-num old_line" data-linenumber="1045" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1045
</td>
<td class="diff-line-num new_line" data-linenumber="1045" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1045
</td>
<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC1045" class="line" lang="mosel"></span>
</pre>
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<tr class="line_holder" id="" style="line-height: 1.6;">
<td class="diff-line-num old_line" data-linenumber="1046" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1046
</td>
<td class="diff-line-num new_line" data-linenumber="1046" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1046
</td>
<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC1046" class="line" lang="mosel"><span class="n" style="color: #333;">Suggests</span><span class="p">:</span> <span class="n" style="color: #333;">python3</span><span class="p">-</span><span class="n" style="color: #333;">pychopper</span></span>
</pre>
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<tr class="line_holder" id="" style="line-height: 1.6;">
<td class="diff-line-num old_line" data-linenumber="1047" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1047
</td>
<td class="diff-line-num new_line" data-linenumber="1047" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1047
</td>
<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC1047" class="line" lang="mosel"></span>
</pre>
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<tr class="line_holder" id="" style="line-height: 1.6;">
<td class="diff-line-num old_line" data-linenumber="1048" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1048
</td>
<td class="diff-line-num new_line" data-linenumber="1048" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1048
</td>
<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC1048" class="line" lang="mosel"><span class="n" style="color: #333;">Suggests</span><span class="p">:</span> <span class="n" style="color: #333;">python3</span><span class="p">-</span><span class="n" style="color: #333;">py2bit</span></span>
</pre>
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<tr class="line_holder" id="" style="line-height: 1.6;">
<td class="diff-line-num old_line" data-linenumber="1049" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1049
</td>
<td class="diff-line-num new_line" data-linenumber="1049" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1049
</td>
<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC1049" class="line" lang="mosel"></span>
</pre>
</td>
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<tr class="line_holder old" id="" style="line-height: 1.6;">
<td class="diff-line-num old old_line" data-linenumber="1050" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1050
</td>
<td class="diff-line-num new_line old" data-linenumber="1050" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
</td>
<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC1050" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">python3</span><span class="p">-</span><span class="n" style="color: #333;">pybedtools</span></span>
</pre>
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<tr class="line_holder new" id="" style="line-height: 1.6;">
<td class="diff-line-num new old_line" data-linenumber="1051" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
</td>
<td class="diff-line-num new new_line" data-linenumber="1050" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1050
</td>
<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC1050" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">python3</span><span class="p">-</span><span class="n" style="color: #333;">pybedtools</span></span>
</pre>
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1051
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<td class="diff-line-num new_line" data-linenumber="1051" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1051
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<pre style="margin: 0;"> <span id="LC1051" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="1052" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1052
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<td class="diff-line-num new_line old" data-linenumber="1052" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC1052" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">python3</span><span class="p">-</span><span class="n" style="color: #333;">sqt</span></span>
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<td class="diff-line-num new old_line" data-linenumber="1053" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="1052" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1052
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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC1052" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">python3</span><span class="p">-</span><span class="n" style="color: #333;">sqt</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1053" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1053
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<td class="diff-line-num new_line" data-linenumber="1053" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1053
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<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC1053" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="1054" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1054
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<td class="diff-line-num new_line old" data-linenumber="1054" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC1054" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">qtlreaper</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="1055" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="1054" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1054
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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC1054" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">qtlreaper</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1055" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1055
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<td class="diff-line-num new_line" data-linenumber="1055" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1055
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<pre style="margin: 0;"> <span id="LC1055" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1056" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1056
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<td class="diff-line-num new_line" data-linenumber="1056" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1056
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<pre style="margin: 0;"> <span id="LC1056" class="line" lang="mosel"><span class="n" style="color: #333;">Suggests</span><span class="p">:</span> <span class="n" style="color: #333;">python3</span><span class="p">-</span><span class="n" style="color: #333;">tinyalign</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1057" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1057
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<td class="diff-line-num new_line" data-linenumber="1057" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1057
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<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC1057" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="1058" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1058
</td>
<td class="diff-line-num new_line old" data-linenumber="1058" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC1058" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">python3</span><span class="p">-</span><span class="n" style="color: #333;">treetime</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="1059" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="1058" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1058
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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC1058" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">python3</span><span class="p">-</span><span class="n" style="color: #333;">treetime</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1059" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1059
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<td class="diff-line-num new_line" data-linenumber="1059" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1059
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<pre style="margin: 0;"> <span id="LC1059" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="1060" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1060
</td>
<td class="diff-line-num new_line old" data-linenumber="1060" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC1060" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">purple</span></span>
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<td class="diff-line-num new old_line" data-linenumber="1061" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="1060" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1060
</td>
<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC1060" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">purple</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1061" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1061
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<td class="diff-line-num new_line" data-linenumber="1061" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1061
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<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC1061" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="1062" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1062
</td>
<td class="diff-line-num new_line old" data-linenumber="1062" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC1062" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">pycoqc</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="1063" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="1062" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1062
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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC1062" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">pycoqc</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1063" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1063
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<td class="diff-line-num new_line" data-linenumber="1063" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1063
</td>
<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC1063" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="1064" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1064
</td>
<td class="diff-line-num new_line old" data-linenumber="1064" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC1064" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">qcat</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="1065" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="1064" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1064
</td>
<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC1064" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">qcat</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1065" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1065
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<td class="diff-line-num new_line" data-linenumber="1065" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1065
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<pre style="margin: 0;"> <span id="LC1065" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="1066" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1066
</td>
<td class="diff-line-num new_line old" data-linenumber="1066" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC1066" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">qcumber</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="1067" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="1066" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1066
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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC1066" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">qcumber</span></span>
</pre>
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1067
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<td class="diff-line-num new_line" data-linenumber="1067" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1067
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<pre style="margin: 0;"> <span id="LC1067" class="line" lang="mosel"></span>
</pre>
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1068
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<td class="diff-line-num new_line old" data-linenumber="1068" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC1068" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">quicktree</span></span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="1068" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1068
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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC1068" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">quicktree</span></span>
</pre>
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1069
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<td class="diff-line-num new_line" data-linenumber="1069" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1069
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<pre style="margin: 0;"> <span id="LC1069" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="1070" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1070
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<td class="diff-line-num new_line old" data-linenumber="1070" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC1070" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">qtltools</span></span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="1070" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1070
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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC1070" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">qtltools</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1071" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1071
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<td class="diff-line-num new_line" data-linenumber="1071" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1071
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<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC1071" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="1072" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1072
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<td class="diff-line-num new_line old" data-linenumber="1072" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC1072" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">qualimap</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="1073" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="1072" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1072
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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC1072" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">qualimap</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1073" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1073
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<td class="diff-line-num new_line" data-linenumber="1073" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1073
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<pre style="margin: 0;"> <span id="LC1073" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="1074" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1074
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<td class="diff-line-num new_line old" data-linenumber="1074" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC1074" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">quast</span></span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="1074" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1074
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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC1074" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">quast</span></span>
</pre>
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1075
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<td class="diff-line-num new_line" data-linenumber="1075" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1075
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<pre style="margin: 0;"> <span id="LC1075" class="line" lang="mosel"></span>
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<td class="diff-line-num old old_line" data-linenumber="1076" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1076
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<td class="diff-line-num new_line old" data-linenumber="1076" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC1076" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">quorum</span></span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="1076" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1076
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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC1076" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">quorum</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1077" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1077
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<td class="diff-line-num new_line" data-linenumber="1077" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1077
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<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC1077" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="1078" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1078
</td>
<td class="diff-line-num new_line old" data-linenumber="1078" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC1078" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">ragout</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="1079" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="1078" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1078
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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC1078" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">ragout</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1079" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1079
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<td class="diff-line-num new_line" data-linenumber="1079" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1079
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<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC1079" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="1080" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1080
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<td class="diff-line-num new_line old" data-linenumber="1080" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
</td>
<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC1080" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">rambo</span><span class="p">-</span><span class="n" style="color: #333;">k</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="1081" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="1080" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1080
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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC1080" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">rambo</span><span class="p">-</span><span class="n" style="color: #333;">k</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1081" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1081
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<td class="diff-line-num new_line" data-linenumber="1081" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1081
</td>
<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC1081" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="1082" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1082
</td>
<td class="diff-line-num new_line old" data-linenumber="1082" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
</td>
<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC1082" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">rapmap</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="1083" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="1082" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1082
</td>
<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC1082" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">rapmap</span></span>
</pre>
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<tr class="line_holder" id="" style="line-height: 1.6;">
<td class="diff-line-num old_line" data-linenumber="1083" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1083
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1083
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<pre style="margin: 0;"> <span id="LC1083" class="line" lang="mosel"></span>
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1084
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<td class="diff-line-num new_line" data-linenumber="1084" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1084
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<pre style="margin: 0;"> <span id="LC1084" class="line" lang="mosel"><span class="n" style="color: #333;">Suggests</span><span class="p">:</span> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">bioc</span><span class="p">-</span><span class="n" style="color: #333;">ctc</span></span>
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1085
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1085
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<pre style="margin: 0;"> <span id="LC1085" class="line" lang="mosel"></span>
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<td class="diff-line-num old old_line" data-linenumber="1086" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1086
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<td class="diff-line-num new_line old" data-linenumber="1086" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC1086" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">bioc</span><span class="p">-</span><span class="n" style="color: #333;">cummerbund</span></span>
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<td class="diff-line-num new old_line" data-linenumber="1087" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="1086" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1086
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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC1086" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">bioc</span><span class="p">-</span><span class="n" style="color: #333;">cummerbund</span></span>
</pre>
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1087
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<td class="diff-line-num new_line" data-linenumber="1087" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1087
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<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC1087" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="1088" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1088
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<td class="diff-line-num new_line old" data-linenumber="1088" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC1088" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">bioc</span><span class="p">-</span><span class="n" style="color: #333;">rtracklayer</span><span class="p">,</span> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">bioc</span><span class="p">-</span><span class="n" style="color: #333;">gviz</span><span class="p">,</span> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">bioc</span><span class="p">-</span><span class="n" style="color: #333;">biostrings</span><span class="p">,</span> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">bioc</span><span class="p">-</span><span class="n" style="color: #333;">annotate</span><span class="p">,</span> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">bioc</span><span class="p">-</span><span class="n" style="color: #333;">genefilter</span></span>
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<td class="diff-line-num new old_line" data-linenumber="1089" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="1088" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1088
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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC1088" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">bioc</span><span class="p">-</span><span class="n" style="color: #333;">rtracklayer</span><span class="p">,</span> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">bioc</span><span class="p">-</span><span class="n" style="color: #333;">gviz</span><span class="p">,</span> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">bioc</span><span class="p">-</span><span class="n" style="color: #333;">biostrings</span><span class="p">,</span> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">bioc</span><span class="p">-</span><span class="n" style="color: #333;">annotate</span><span class="p">,</span> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">bioc</span><span class="p">-</span><span class="n" style="color: #333;">genefilter</span></span>
</pre>
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1089
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1089
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<pre style="margin: 0;"> <span id="LC1089" class="line" lang="mosel"></span>
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1090
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<td class="diff-line-num new_line old" data-linenumber="1090" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC1090" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">bioc</span><span class="p">-</span><span class="n" style="color: #333;">deseq2</span><span class="p">,</span> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">bioc</span><span class="p">-</span><span class="n" style="color: #333;">dnacopy</span><span class="p">,</span> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">bioc</span><span class="p">-</span><span class="n" style="color: #333;">geneplotter</span></span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="1090" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1090
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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC1090" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">bioc</span><span class="p">-</span><span class="n" style="color: #333;">deseq2</span><span class="p">,</span> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">bioc</span><span class="p">-</span><span class="n" style="color: #333;">dnacopy</span><span class="p">,</span> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">bioc</span><span class="p">-</span><span class="n" style="color: #333;">geneplotter</span></span>
</pre>
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1091
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1091
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<pre style="margin: 0;"> <span id="LC1091" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="1092" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1092
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<td class="diff-line-num new_line old" data-linenumber="1092" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC1092" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">bioc</span><span class="p">-</span><span class="n" style="color: #333;">geoquery</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="1093" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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1092
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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC1092" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">bioc</span><span class="p">-</span><span class="n" style="color: #333;">geoquery</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1093" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1093
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1093
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<pre style="margin: 0;"> <span id="LC1093" class="line" lang="mosel"></span>
</pre>
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1094
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<td class="diff-line-num new_line" data-linenumber="1094" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1094
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<pre style="margin: 0;"> <span id="LC1094" class="line" lang="mosel"><span class="n" style="color: #333;">Suggests</span><span class="p">:</span> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">bioc</span><span class="p">-</span><span class="n" style="color: #333;">grohmm</span></span>
</pre>
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1095
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1095
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<pre style="margin: 0;"> <span id="LC1095" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="1103" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="1103" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -1103,7 +1103,7 @@ Suggests: r-cran-corrplot</td>
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<td class="diff-line-num old_line" data-linenumber="1103" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1103
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<td class="diff-line-num new_line" data-linenumber="1103" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1103
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<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC1103" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1104" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1104
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<td class="diff-line-num new_line" data-linenumber="1104" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1104
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<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC1104" class="line" lang="mosel"><span class="n" style="color: #333;">Suggests</span><span class="p">:</span> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">cran</span><span class="p">-</span><span class="n" style="color: #333;">dynamictreecut</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1105" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1105
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1105
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<pre style="margin: 0;"> <span id="LC1105" class="line" lang="mosel"></span>
</pre>
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1106
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<td class="diff-line-num new_line old" data-linenumber="1106" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC1106" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">bioc</span><span class="p">-</span><span class="n" style="color: #333;">ebseq</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="1107" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="1106" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1106
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<pre style="margin: 0;">+<span id="LC1106" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">bioc</span><span class="p">-</span><span class="n" style="color: #333;">ebseq</span></span>
</pre>
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1107
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<td class="diff-line-num new_line" data-linenumber="1107" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1107
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<pre style="margin: 0;"> <span id="LC1107" class="line" lang="mosel"></span>
</pre>
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1108
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<td class="diff-line-num new_line" data-linenumber="1108" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1108
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<pre style="margin: 0;"> <span id="LC1108" class="line" lang="mosel"><span class="n" style="color: #333;">Suggests</span><span class="p">:</span> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">cran</span><span class="p">-</span><span class="n" style="color: #333;">forecast</span></span>
</pre>
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1109
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1109
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<pre style="margin: 0;"> <span id="LC1109" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="1111" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="1111" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -1111,23 +1111,23 @@ Suggests: r-cran-gprofiler</td>
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<td class="diff-line-num old_line" data-linenumber="1111" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1111
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<td class="diff-line-num new_line" data-linenumber="1111" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1111
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<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC1111" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1112" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1112
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<td class="diff-line-num new_line" data-linenumber="1112" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1112
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<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC1112" class="line" lang="mosel"><span class="n" style="color: #333;">Suggests</span><span class="p">:</span> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">cran</span><span class="p">-</span><span class="n" style="color: #333;">fitdistrplus</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1113" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1113
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<td class="diff-line-num new_line" data-linenumber="1113" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1113
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<pre style="margin: 0;"> <span id="LC1113" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="1114" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1114
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<td class="diff-line-num new_line old" data-linenumber="1114" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC1114" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">bioc</span><span class="p">-</span><span class="n" style="color: #333;">impute</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="1115" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="1114" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1114
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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC1114" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">bioc</span><span class="p">-</span><span class="n" style="color: #333;">impute</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1115" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1115
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1115
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<pre style="margin: 0;"> <span id="LC1115" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="1116" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1116
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<td class="diff-line-num new_line old" data-linenumber="1116" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC1116" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">bioc</span><span class="p">-</span><span class="n" style="color: #333;">mergeomics</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="1117" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="1116" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1116
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<pre style="margin: 0;">+<span id="LC1116" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">bioc</span><span class="p">-</span><span class="n" style="color: #333;">mergeomics</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1117" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1117
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1117
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<pre style="margin: 0;"> <span id="LC1117" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="1118" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1118
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<td class="diff-line-num new_line old" data-linenumber="1118" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC1118" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">bioc</span><span class="p">-</span><span class="n" style="color: #333;">metagenomeseq</span><span class="p">,</span> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">bioc</span><span class="p">-</span><span class="n" style="color: #333;">phyloseq</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="1119" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="1118" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1118
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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC1118" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">bioc</span><span class="p">-</span><span class="n" style="color: #333;">metagenomeseq</span><span class="p">,</span> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">bioc</span><span class="p">-</span><span class="n" style="color: #333;">phyloseq</span></span>
</pre>
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<tr class="line_holder" id="" style="line-height: 1.6;">
<td class="diff-line-num old_line" data-linenumber="1119" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1119
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1119
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<pre style="margin: 0;"> <span id="LC1119" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="1120" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1120
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<td class="diff-line-num new_line old" data-linenumber="1120" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
</td>
<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC1120" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">bioc</span><span class="p">-</span><span class="n" style="color: #333;">mofa</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="1121" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="1120" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1120
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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC1120" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">bioc</span><span class="p">-</span><span class="n" style="color: #333;">mofa</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1121" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1121
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1121
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<pre style="margin: 0;"> <span id="LC1121" class="line" lang="mosel"></span>
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1122
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<td class="diff-line-num new_line old" data-linenumber="1122" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC1122" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">bioc</span><span class="p">-</span><span class="n" style="color: #333;">multiassayexperiment</span></span>
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<td class="diff-line-num new old_line" data-linenumber="1123" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="1122" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1122
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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC1122" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">bioc</span><span class="p">-</span><span class="n" style="color: #333;">multiassayexperiment</span></span>
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1123
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<td class="diff-line-num new_line" data-linenumber="1123" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1123
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<pre style="margin: 0;"> <span id="LC1123" class="line" lang="mosel"></span>
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1124
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<td class="diff-line-num new_line old" data-linenumber="1124" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC1124" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">bioc</span><span class="p">-</span><span class="n" style="color: #333;">mutationalpatterns</span></span>
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<td class="diff-line-num new old_line" data-linenumber="1125" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="1124" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1124
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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC1124" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">bioc</span><span class="p">-</span><span class="n" style="color: #333;">mutationalpatterns</span></span>
</pre>
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1125
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<td class="diff-line-num new_line" data-linenumber="1125" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1125
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<pre style="margin: 0;"> <span id="LC1125" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="1126" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1126
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<td class="diff-line-num new_line old" data-linenumber="1126" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC1126" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">bioc</span><span class="p">-</span><span class="n" style="color: #333;">limma</span><span class="p">,</span> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">bioc</span><span class="p">-</span><span class="n" style="color: #333;">edger</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="1127" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="1126" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1126
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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC1126" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">bioc</span><span class="p">-</span><span class="n" style="color: #333;">limma</span><span class="p">,</span> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">bioc</span><span class="p">-</span><span class="n" style="color: #333;">edger</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1127" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1127
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<td class="diff-line-num new_line" data-linenumber="1127" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1127
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<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC1127" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="1128" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1128
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<td class="diff-line-num new_line old" data-linenumber="1128" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC1128" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">bioc</span><span class="p">-</span><span class="n" style="color: #333;">bitseq</span><span class="p">,</span> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">bioc</span><span class="p">-</span><span class="n" style="color: #333;">pcamethods</span><span class="p">,</span> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">cran</span><span class="p">-</span><span class="n" style="color: #333;">samr</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="1129" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="1128" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1128
</td>
<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC1128" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">bioc</span><span class="p">-</span><span class="n" style="color: #333;">bitseq</span><span class="p">,</span> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">bioc</span><span class="p">-</span><span class="n" style="color: #333;">pcamethods</span><span class="p">,</span> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">cran</span><span class="p">-</span><span class="n" style="color: #333;">samr</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1129" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1129
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<td class="diff-line-num new_line" data-linenumber="1129" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1129
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<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC1129" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="1130" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1130
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<td class="diff-line-num new_line old" data-linenumber="1130" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC1130" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">bioc</span><span class="p">-</span><span class="n" style="color: #333;">htsfilter</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="1131" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="1130" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1130
</td>
<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC1130" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">bioc</span><span class="p">-</span><span class="n" style="color: #333;">htsfilter</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1131" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1131
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<td class="diff-line-num new_line" data-linenumber="1131" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1131
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<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC1131" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1132" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1132
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<td class="diff-line-num new_line" data-linenumber="1132" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1132
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<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC1132" class="line" lang="mosel"><span class="n" style="color: #333;">Suggests</span><span class="p">:</span> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">bioc</span><span class="p">-</span><span class="n" style="color: #333;">annotationhub</span><span class="p">,</span> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">bioc</span><span class="p">-</span><span class="n" style="color: #333;">aroma</span><span class="p">.</span><span class="n" style="color: #333;">light</span><span class="p">,</span> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">bioc</span><span class="p">-</span><span class="n" style="color: #333;">ensembldb</span><span class="p">,</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1133" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1133
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<td class="diff-line-num new_line" data-linenumber="1133" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1133
</td>
<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC1133" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="1141" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="1141" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -1141,33 +1141,33 @@ Recommends: r-cran-rotl</td>
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<td class="diff-line-num old_line" data-linenumber="1141" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1141
</td>
<td class="diff-line-num new_line" data-linenumber="1141" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1141
</td>
<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC1141" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1142" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1142
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<td class="diff-line-num new_line" data-linenumber="1142" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1142
</td>
<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC1142" class="line" lang="mosel"><span class="n" style="color: #333;">Suggests</span><span class="p">:</span> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">cran</span><span class="p">-</span><span class="n" style="color: #333;">rentrez</span></span>
</pre>
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1143
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<td class="diff-line-num new_line" data-linenumber="1143" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1143
</td>
<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC1143" class="line" lang="mosel"></span>
</pre>
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1144
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<td class="diff-line-num new_line old" data-linenumber="1144" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC1144" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">cran</span><span class="p">-</span><span class="n" style="color: #333;">adegenet</span><span class="p">,</span> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">cran</span><span class="p">-</span><span class="n" style="color: #333;">adephylo</span></span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="1144" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1144
</td>
<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC1144" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">cran</span><span class="p">-</span><span class="n" style="color: #333;">adegenet</span><span class="p">,</span> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">cran</span><span class="p">-</span><span class="n" style="color: #333;">adephylo</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1145" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1145
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<td class="diff-line-num new_line" data-linenumber="1145" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1145
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<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC1145" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="1146" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1146
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<td class="diff-line-num new_line old" data-linenumber="1146" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC1146" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">cran</span><span class="p">-</span><span class="n" style="color: #333;">ape</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="1147" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="1146" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1146
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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC1146" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">cran</span><span class="p">-</span><span class="n" style="color: #333;">ape</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1147" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1147
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<td class="diff-line-num new_line" data-linenumber="1147" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1147
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<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC1147" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1148" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1148
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<td class="diff-line-num new_line" data-linenumber="1148" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1148
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<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC1148" class="line" lang="mosel"><span class="n" style="color: #333;">Suggests</span><span class="p">:</span> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">cran</span><span class="p">-</span><span class="n" style="color: #333;">boolnet</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1149" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1149
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<td class="diff-line-num new_line" data-linenumber="1149" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1149
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<pre style="margin: 0;"> <span id="LC1149" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="1150" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1150
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<td class="diff-line-num new_line old" data-linenumber="1150" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC1150" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">cran</span><span class="p">-</span><span class="n" style="color: #333;">distory</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="1151" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="1150" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1150
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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC1150" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">cran</span><span class="p">-</span><span class="n" style="color: #333;">distory</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1151" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1151
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<td class="diff-line-num new_line" data-linenumber="1151" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1151
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<pre style="margin: 0;"> <span id="LC1151" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="1152" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1152
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<td class="diff-line-num new_line old" data-linenumber="1152" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC1152" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">cran</span><span class="p">-</span><span class="n" style="color: #333;">drinsight</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="1153" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="1152" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1152
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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC1152" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">cran</span><span class="p">-</span><span class="n" style="color: #333;">drinsight</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1153" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1153
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<td class="diff-line-num new_line" data-linenumber="1153" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1153
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<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC1153" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="1154" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1154
</td>
<td class="diff-line-num new_line old" data-linenumber="1154" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC1154" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">cran</span><span class="p">-</span><span class="n" style="color: #333;">kaos</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="1155" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="1154" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1154
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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC1154" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">cran</span><span class="p">-</span><span class="n" style="color: #333;">kaos</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1155" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1155
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<td class="diff-line-num new_line" data-linenumber="1155" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1155
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<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC1155" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1156" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1156
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<td class="diff-line-num new_line" data-linenumber="1156" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1156
</td>
<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC1156" class="line" lang="mosel"><span class="n" style="color: #333;">Suggests</span><span class="p">:</span> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">cran</span><span class="p">-</span><span class="n" style="color: #333;">minerva</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1157" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1157
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<td class="diff-line-num new_line" data-linenumber="1157" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1157
</td>
<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC1157" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="1158" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1158
</td>
<td class="diff-line-num new_line old" data-linenumber="1158" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
</td>
<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC1158" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">cran</span><span class="p">-</span><span class="n" style="color: #333;">metamix</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="1159" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
</td>
<td class="diff-line-num new new_line" data-linenumber="1158" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1158
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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC1158" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">cran</span><span class="p">-</span><span class="n" style="color: #333;">metamix</span></span>
</pre>
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1159
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1159
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<pre style="margin: 0;"> <span id="LC1159" class="line" lang="mosel"></span>
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<td class="diff-line-num old_line" data-linenumber="1160" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1160
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<td class="diff-line-num new_line" data-linenumber="1160" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1160
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<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC1160" class="line" lang="mosel"><span class="n" style="color: #333;">Suggests</span><span class="p">:</span> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">cran</span><span class="p">-</span><span class="n" style="color: #333;">optimalcutpoints</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1161" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1161
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<td class="diff-line-num new_line" data-linenumber="1161" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1161
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<pre style="margin: 0;"> <span id="LC1161" class="line" lang="mosel"></span>
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<td class="diff-line-num old_line" data-linenumber="1162" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1162
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<td class="diff-line-num new_line" data-linenumber="1162" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1162
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<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC1162" class="line" lang="mosel"><span class="n" style="color: #333;">Suggests</span><span class="p">:</span> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">cran</span><span class="p">-</span><span class="n" style="color: #333;">parmigene</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1163" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1163
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<td class="diff-line-num new_line" data-linenumber="1163" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1163
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<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC1163" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="1164" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1164
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<td class="diff-line-num new_line old" data-linenumber="1164" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC1164" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">cran</span><span class="p">-</span><span class="n" style="color: #333;">phangorn</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="1165" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
</td>
<td class="diff-line-num new new_line" data-linenumber="1164" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1164
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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC1164" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">cran</span><span class="p">-</span><span class="n" style="color: #333;">phangorn</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1165" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1165
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<td class="diff-line-num new_line" data-linenumber="1165" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1165
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<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC1165" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1166" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1166
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<td class="diff-line-num new_line" data-linenumber="1166" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1166
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<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC1166" class="line" lang="mosel"><span class="n" style="color: #333;">Suggests</span><span class="p">:</span> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">cran</span><span class="p">-</span><span class="n" style="color: #333;">pheatmap</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1167" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1167
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<td class="diff-line-num new_line" data-linenumber="1167" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1167
</td>
<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC1167" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="1168" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1168
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<td class="diff-line-num new_line old" data-linenumber="1168" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC1168" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">cran</span><span class="p">-</span><span class="n" style="color: #333;">phytools</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="1169" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
</td>
<td class="diff-line-num new new_line" data-linenumber="1168" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1168
</td>
<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC1168" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">cran</span><span class="p">-</span><span class="n" style="color: #333;">phytools</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1169" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1169
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<td class="diff-line-num new_line" data-linenumber="1169" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1169
</td>
<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC1169" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="1170" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1170
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<td class="diff-line-num new_line old" data-linenumber="1170" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC1170" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">cran</span><span class="p">-</span><span class="n" style="color: #333;">pscbs</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="1171" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
</td>
<td class="diff-line-num new new_line" data-linenumber="1170" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1170
</td>
<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC1170" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">cran</span><span class="p">-</span><span class="n" style="color: #333;">pscbs</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1171" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1171
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<td class="diff-line-num new_line" data-linenumber="1171" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1171
</td>
<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC1171" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1172" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1172
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<td class="diff-line-num new_line" data-linenumber="1172" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1172
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<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC1172" class="line" lang="mosel"><span class="n" style="color: #333;">Suggests</span><span class="p">:</span> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">cran</span><span class="p">-</span><span class="n" style="color: #333;">rsgcc</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1173" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1173
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<td class="diff-line-num new_line" data-linenumber="1173" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1173
</td>
<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC1173" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="1175" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="1175" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -1175,92 +1175,92 @@ Suggests: r-bioc-savr</td>
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<td class="diff-line-num old_line" data-linenumber="1175" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1175
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<td class="diff-line-num new_line" data-linenumber="1175" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1175
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<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC1175" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1176" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1176
</td>
<td class="diff-line-num new_line" data-linenumber="1176" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1176
</td>
<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC1176" class="line" lang="mosel"><span class="n" style="color: #333;">Suggests</span><span class="p">:</span> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">cran</span><span class="p">-</span><span class="n" style="color: #333;">sctransform</span></span>
</pre>
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<tr class="line_holder" id="" style="line-height: 1.6;">
<td class="diff-line-num old_line" data-linenumber="1177" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1177
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<td class="diff-line-num new_line" data-linenumber="1177" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1177
</td>
<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC1177" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="1178" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1178
</td>
<td class="diff-line-num new_line old" data-linenumber="1178" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
</td>
<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC1178" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">cran</span><span class="p">-</span><span class="n" style="color: #333;">seurat</span></span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="1178" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1178
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<pre style="margin: 0;">+<span id="LC1178" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">cran</span><span class="p">-</span><span class="n" style="color: #333;">seurat</span></span>
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1179
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1179
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<pre style="margin: 0;"> <span id="LC1179" class="line" lang="mosel"></span>
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1180
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<td class="diff-line-num new_line old" data-linenumber="1180" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC1180" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">cran</span><span class="p">-</span><span class="n" style="color: #333;">seqinr</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="1181" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="1180" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1180
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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC1180" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">cran</span><span class="p">-</span><span class="n" style="color: #333;">seqinr</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1181" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1181
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<td class="diff-line-num new_line" data-linenumber="1181" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1181
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<pre style="margin: 0;"> <span id="LC1181" class="line" lang="mosel"></span>
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1182
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<td class="diff-line-num new_line old" data-linenumber="1182" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC1182" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">cran</span><span class="p">-</span><span class="n" style="color: #333;">spp</span></span>
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<td class="diff-line-num new old_line" data-linenumber="1183" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="1182" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1182
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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC1182" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">cran</span><span class="p">-</span><span class="n" style="color: #333;">spp</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1183" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1183
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<td class="diff-line-num new_line" data-linenumber="1183" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1183
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<pre style="margin: 0;"> <span id="LC1183" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="1184" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1184
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<td class="diff-line-num new_line old" data-linenumber="1184" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC1184" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">bioc</span><span class="p">-</span><span class="n" style="color: #333;">tfbstools</span><span class="p">,</span> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">bioc</span><span class="p">-</span><span class="n" style="color: #333;">cner</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="1185" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="1184" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1184
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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC1184" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">bioc</span><span class="p">-</span><span class="n" style="color: #333;">tfbstools</span><span class="p">,</span> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">bioc</span><span class="p">-</span><span class="n" style="color: #333;">cner</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1185" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1185
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<td class="diff-line-num new_line" data-linenumber="1185" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1185
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<pre style="margin: 0;"> <span id="LC1185" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="1186" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1186
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<td class="diff-line-num new_line old" data-linenumber="1186" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC1186" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">cran</span><span class="p">-</span><span class="n" style="color: #333;">treescape</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="1187" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="1186" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1186
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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC1186" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">cran</span><span class="p">-</span><span class="n" style="color: #333;">treescape</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1187" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1187
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<td class="diff-line-num new_line" data-linenumber="1187" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1187
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<pre style="margin: 0;"> <span id="LC1187" class="line" lang="mosel"></span>
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1188
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<td class="diff-line-num new_line old" data-linenumber="1188" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC1188" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">cran</span><span class="p">-</span><span class="n" style="color: #333;">tsne</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="1189" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="1188" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1188
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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC1188" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">cran</span><span class="p">-</span><span class="n" style="color: #333;">tsne</span></span>
</pre>
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1189
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1189
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<pre style="margin: 0;"> <span id="LC1189" class="line" lang="mosel"></span>
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1190
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<td class="diff-line-num new_line" data-linenumber="1190" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1190
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<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC1190" class="line" lang="mosel"><span class="n" style="color: #333;">Suggests</span><span class="p">:</span> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">bioc</span><span class="p">-</span><span class="n" style="color: #333;">tximport</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1191
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1191
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<pre style="margin: 0;"> <span id="LC1191" class="line" lang="mosel"></span>
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1192
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<td class="diff-line-num new_line old" data-linenumber="1192" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC1192" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">cran</span><span class="p">-</span><span class="n" style="color: #333;">vegan</span></span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="1192" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1192
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<pre style="margin: 0;">+<span id="LC1192" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">cran</span><span class="p">-</span><span class="n" style="color: #333;">vegan</span></span>
</pre>
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1193
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<td class="diff-line-num new_line" data-linenumber="1193" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1193
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<pre style="margin: 0;"> <span id="LC1193" class="line" lang="mosel"></span>
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1194
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<td class="diff-line-num new_line old" data-linenumber="1194" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC1194" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">cran</span><span class="p">-</span><span class="n" style="color: #333;">webgestaltr</span></span>
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<td class="diff-line-num new old_line" data-linenumber="1195" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="1194" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1194
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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC1194" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">cran</span><span class="p">-</span><span class="n" style="color: #333;">webgestaltr</span></span>
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<td class="diff-line-num old_line" data-linenumber="1195" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1195
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<td class="diff-line-num new_line" data-linenumber="1195" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1195
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<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC1195" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="1196" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1196
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<td class="diff-line-num new_line old" data-linenumber="1196" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC1196" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">other</span><span class="p">-</span><span class="n" style="color: #333;">apmswapp</span></span>
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<td class="diff-line-num new old_line" data-linenumber="1197" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="1196" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1196
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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC1196" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">other</span><span class="p">-</span><span class="n" style="color: #333;">apmswapp</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1197" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1197
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<td class="diff-line-num new_line" data-linenumber="1197" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1197
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<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC1197" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="1198" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1198
</td>
<td class="diff-line-num new_line old" data-linenumber="1198" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC1198" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">other</span><span class="p">-</span><span class="n" style="color: #333;">hms</span><span class="p">-</span><span class="n" style="color: #333;">dbmi</span><span class="p">-</span><span class="n" style="color: #333;">spp</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="1199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
</td>
<td class="diff-line-num new new_line" data-linenumber="1198" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1198
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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC1198" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">other</span><span class="p">-</span><span class="n" style="color: #333;">hms</span><span class="p">-</span><span class="n" style="color: #333;">dbmi</span><span class="p">-</span><span class="n" style="color: #333;">spp</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1199
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<td class="diff-line-num new_line" data-linenumber="1199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1199
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<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC1199" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="1200" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1200
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<td class="diff-line-num new_line old" data-linenumber="1200" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC1200" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">cran</span><span class="p">-</span><span class="n" style="color: #333;">wgcna</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="1201" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
</td>
<td class="diff-line-num new new_line" data-linenumber="1200" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1200
</td>
<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC1200" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">cran</span><span class="p">-</span><span class="n" style="color: #333;">wgcna</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1201" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1201
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<td class="diff-line-num new_line" data-linenumber="1201" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1201
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<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC1201" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="1202" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1202
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<td class="diff-line-num new_line old" data-linenumber="1202" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC1202" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">other</span><span class="p">-</span><span class="n" style="color: #333;">ascat</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="1203" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="1202" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1202
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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC1202" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">other</span><span class="p">-</span><span class="n" style="color: #333;">ascat</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1203" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1203
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<td class="diff-line-num new_line" data-linenumber="1203" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1203
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<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC1203" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="1204" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1204
</td>
<td class="diff-line-num new_line old" data-linenumber="1204" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC1204" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">readucks</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="1205" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="1204" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1204
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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC1204" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">readucks</span></span>
</pre>
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1205
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<td class="diff-line-num new_line" data-linenumber="1205" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1205
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<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC1205" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="1206" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1206
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<td class="diff-line-num new_line old" data-linenumber="1206" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC1206" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">recan</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="1207" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="1206" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1206
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<pre style="margin: 0;">+<span id="LC1206" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">recan</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1207" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1207
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1207
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<pre style="margin: 0;"> <span id="LC1207" class="line" lang="mosel"></span>
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<td class="diff-line-num old old_line" data-linenumber="1208" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1208
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<td class="diff-line-num new_line old" data-linenumber="1208" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC1208" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">relion</span><span class="p">-</span><span class="n" style="color: #333;">bin</span><span class="p">+</span><span class="n" style="color: #333;">gui</span> <span class="p">|</span> <span class="n" style="color: #333;">relion</span><span class="p">-</span><span class="n" style="color: #333;">bin</span><span class="p">+</span><span class="n" style="color: #333;">mpi</span><span class="p">+</span><span class="n" style="color: #333;">gui</span><span class="p">,</span> <span class="n" style="color: #333;">relion</span><span class="p">-</span><span class="n" style="color: #333;">bin</span> <span class="p">|</span> <span class="n" style="color: #333;">relion</span><span class="p">-</span><span class="n" style="color: #333;">bin</span><span class="p">+</span><span class="n" style="color: #333;">mpi</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="1209" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="1208" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1208
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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC1208" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">relion</span><span class="p">-</span><span class="n" style="color: #333;">bin</span><span class="p">+</span><span class="n" style="color: #333;">gui</span> <span class="p">|</span> <span class="n" style="color: #333;">relion</span><span class="p">-</span><span class="n" style="color: #333;">bin</span><span class="p">+</span><span class="n" style="color: #333;">mpi</span><span class="p">+</span><span class="n" style="color: #333;">gui</span><span class="p">,</span> <span class="n" style="color: #333;">relion</span><span class="p">-</span><span class="n" style="color: #333;">bin</span> <span class="p">|</span> <span class="n" style="color: #333;">relion</span><span class="p">-</span><span class="n" style="color: #333;">bin</span><span class="p">+</span><span class="n" style="color: #333;">mpi</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1209" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1209
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<td class="diff-line-num new_line" data-linenumber="1209" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1209
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<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC1209" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="1210" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1210
</td>
<td class="diff-line-num new_line old" data-linenumber="1210" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC1210" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">rdp</span><span class="p">-</span><span class="n" style="color: #333;">alignment</span><span class="p">,</span> <span class="n" style="color: #333;">rdp</span><span class="p">-</span><span class="n" style="color: #333;">readseq</span><span class="p">,</span> <span class="n" style="color: #333;">rdp</span><span class="p">-</span><span class="n" style="color: #333;">classifier</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="1211" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
</td>
<td class="diff-line-num new new_line" data-linenumber="1210" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1210
</td>
<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC1210" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">rdp</span><span class="p">-</span><span class="n" style="color: #333;">alignment</span><span class="p">,</span> <span class="n" style="color: #333;">rdp</span><span class="p">-</span><span class="n" style="color: #333;">readseq</span><span class="p">,</span> <span class="n" style="color: #333;">rdp</span><span class="p">-</span><span class="n" style="color: #333;">classifier</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1211" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1211
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<td class="diff-line-num new_line" data-linenumber="1211" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1211
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<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC1211" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="1212" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1212
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<td class="diff-line-num new_line old" data-linenumber="1212" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC1212" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">reapr</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="1213" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="1212" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1212
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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC1212" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">reapr</span></span>
</pre>
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<tr class="line_holder" id="" style="line-height: 1.6;">
<td class="diff-line-num old_line" data-linenumber="1213" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1213
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<td class="diff-line-num new_line" data-linenumber="1213" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1213
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<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC1213" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="1214" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1214
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<td class="diff-line-num new_line old" data-linenumber="1214" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC1214" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">repeatmasker</span><span class="p">-</span><span class="n" style="color: #333;">recon</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="1215" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="1214" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1214
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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC1214" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">repeatmasker</span><span class="p">-</span><span class="n" style="color: #333;">recon</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1215" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1215
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<td class="diff-line-num new_line" data-linenumber="1215" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1215
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<pre style="margin: 0;"> <span id="LC1215" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="1216" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1216
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<td class="diff-line-num new_line old" data-linenumber="1216" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC1216" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">repeatmasker</span></span>
</pre>
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<tr class="line_holder new" id="" style="line-height: 1.6;">
<td class="diff-line-num new old_line" data-linenumber="1217" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="1216" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1216
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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC1216" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">repeatmasker</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1217" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1217
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<td class="diff-line-num new_line" data-linenumber="1217" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1217
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<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC1217" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="1218" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1218
</td>
<td class="diff-line-num new_line old" data-linenumber="1218" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC1218" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">resfinder</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="1219" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="1218" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1218
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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC1218" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">resfinder</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1219" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1219
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<td class="diff-line-num new_line" data-linenumber="1219" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1219
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<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC1219" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="1220" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1220
</td>
<td class="diff-line-num new_line old" data-linenumber="1220" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC1220" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">roadtrips</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="1221" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
</td>
<td class="diff-line-num new new_line" data-linenumber="1220" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1220
</td>
<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC1220" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">roadtrips</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1221" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1221
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<td class="diff-line-num new_line" data-linenumber="1221" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1221
</td>
<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC1221" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="1222" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1222
</td>
<td class="diff-line-num new_line old" data-linenumber="1222" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC1222" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">roary</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="1223" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
</td>
<td class="diff-line-num new new_line" data-linenumber="1222" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1222
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<pre style="margin: 0;">+<span id="LC1222" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">roary</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1223" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1223
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<td class="diff-line-num new_line" data-linenumber="1223" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1223
</td>
<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC1223" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="1224" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1224
</td>
<td class="diff-line-num new_line old" data-linenumber="1224" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC1224" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">roguenarok</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="1225" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
</td>
<td class="diff-line-num new new_line" data-linenumber="1224" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1224
</td>
<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC1224" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">roguenarok</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1225" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1225
</td>
<td class="diff-line-num new_line" data-linenumber="1225" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1225
</td>
<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC1225" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="1226" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1226
</td>
<td class="diff-line-num new_line old" data-linenumber="1226" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
</td>
<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC1226" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">rsat</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="1227" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
</td>
<td class="diff-line-num new new_line" data-linenumber="1226" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1226
</td>
<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC1226" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">rsat</span></span>
</pre>
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<tr class="line_holder" id="" style="line-height: 1.6;">
<td class="diff-line-num old_line" data-linenumber="1227" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1227
</td>
<td class="diff-line-num new_line" data-linenumber="1227" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1227
</td>
<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC1227" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="1228" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1228
</td>
<td class="diff-line-num new_line old" data-linenumber="1228" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
</td>
<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC1228" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">rsem</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="1229" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
</td>
<td class="diff-line-num new new_line" data-linenumber="1228" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1228
</td>
<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC1228" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">rsem</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1229" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1229
</td>
<td class="diff-line-num new_line" data-linenumber="1229" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1229
</td>
<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC1229" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="1230" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1230
</td>
<td class="diff-line-num new_line old" data-linenumber="1230" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
</td>
<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC1230" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">sambamba</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="1231" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
</td>
<td class="diff-line-num new new_line" data-linenumber="1230" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1230
</td>
<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC1230" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">sambamba</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1231" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1231
</td>
<td class="diff-line-num new_line" data-linenumber="1231" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1231
</td>
<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC1231" class="line" lang="mosel"></span>
</pre>
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<tr class="line_holder old" id="" style="line-height: 1.6;">
<td class="diff-line-num old old_line" data-linenumber="1232" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1232
</td>
<td class="diff-line-num new_line old" data-linenumber="1232" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
</td>
<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC1232" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">samblaster</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="1233" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
</td>
<td class="diff-line-num new new_line" data-linenumber="1232" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1232
</td>
<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC1232" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">samblaster</span></span>
</pre>
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<tr class="line_holder" id="" style="line-height: 1.6;">
<td class="diff-line-num old_line" data-linenumber="1233" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1233
</td>
<td class="diff-line-num new_line" data-linenumber="1233" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1233
</td>
<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC1233" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="1234" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1234
</td>
<td class="diff-line-num new_line old" data-linenumber="1234" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
</td>
<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC1234" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">salmon</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="1235" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
</td>
<td class="diff-line-num new new_line" data-linenumber="1234" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1234
</td>
<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC1234" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">salmon</span></span>
</pre>
</td>
</tr>
<tr class="line_holder" id="" style="line-height: 1.6;">
<td class="diff-line-num old_line" data-linenumber="1235" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1235
</td>
<td class="diff-line-num new_line" data-linenumber="1235" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1235
</td>
<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC1235" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="1236" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1236
</td>
<td class="diff-line-num new_line old" data-linenumber="1236" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
</td>
<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC1236" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">samclip</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="1237" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
</td>
<td class="diff-line-num new new_line" data-linenumber="1236" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1236
</td>
<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC1236" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">samclip</span></span>
</pre>
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<tr class="line_holder" id="" style="line-height: 1.6;">
<td class="diff-line-num old_line" data-linenumber="1237" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1237
</td>
<td class="diff-line-num new_line" data-linenumber="1237" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1237
</td>
<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC1237" class="line" lang="mosel"></span>
</pre>
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<tr class="line_holder old" id="" style="line-height: 1.6;">
<td class="diff-line-num old old_line" data-linenumber="1238" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1238
</td>
<td class="diff-line-num new_line old" data-linenumber="1238" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
</td>
<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC1238" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">sap</span></span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="1238" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1238
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<pre style="margin: 0;">+<span id="LC1238" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">sap</span></span>
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1239
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1239
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<pre style="margin: 0;"> <span id="LC1239" class="line" lang="mosel"><span class="n" style="color: #333;">Remark</span><span class="p">:</span> <span class="n" style="color: #333;">Precondition</span> <span class="n" style="color: #333;">for</span> <span class="n" style="color: #333;">T</span><span class="p">-</span><span class="n" style="color: #333;">Coffee</span></span>
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1240
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1240
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<pre style="margin: 0;"> <span id="LC1240" class="line" lang="mosel"> <span class="n" style="color: #333;">see</span> <span class="n" style="color: #333;">http</span><span class="p">://</span><span class="n" style="color: #333;">wiki</span><span class="p">.</span><span class="n" style="color: #333;">debian</span><span class="p">.</span><span class="n" style="color: #333;">org</span><span class="p">/</span><span class="n" style="color: #333;">DebianMed</span><span class="p">/</span><span class="n" style="color: #333;">TCoffee</span></span>
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1241
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1241
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<pre style="margin: 0;"> <span id="LC1241" class="line" lang="mosel"></span>
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1242
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<td class="diff-line-num new_line old" data-linenumber="1242" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC1242" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">scrappie</span></span>
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1242
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<pre style="margin: 0;">+<span id="LC1242" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">scrappie</span></span>
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1243
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1243
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<pre style="margin: 0;"> <span id="LC1243" class="line" lang="mosel"></span>
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1244
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<td class="diff-line-num new_line old" data-linenumber="1244" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC1244" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">scrm</span></span>
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1244
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<pre style="margin: 0;">+<span id="LC1244" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">scrm</span></span>
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1245
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1245
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<pre style="margin: 0;"> <span id="LC1245" class="line" lang="mosel"></span>
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1246
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<td class="diff-line-num new_line old" data-linenumber="1246" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC1246" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">seer</span></span>
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1246
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<pre style="margin: 0;">+<span id="LC1246" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">seer</span></span>
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1247
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1247
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<pre style="margin: 0;"> <span id="LC1247" class="line" lang="mosel"></span>
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1248
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<td class="diff-line-num new_line old" data-linenumber="1248" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC1248" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">segemehl</span></span>
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1248
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<pre style="margin: 0;">+<span id="LC1248" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">segemehl</span></span>
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1249
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1249
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<pre style="margin: 0;"> <span id="LC1249" class="line" lang="mosel"></span>
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1250
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<pre style="margin: 0;">-<span id="LC1250" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">sepp</span></span>
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1250
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<pre style="margin: 0;">+<span id="LC1250" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">sepp</span></span>
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1251
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1251
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<pre style="margin: 0;"> <span id="LC1251" class="line" lang="mosel"></span>
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1252
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<pre style="margin: 0;">-<span id="LC1252" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">seq</span><span class="p">-</span><span class="n" style="color: #333;">seq</span><span class="p">-</span><span class="n" style="color: #333;">pan</span></span>
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<td class="diff-line-num new old_line" data-linenumber="1253" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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1252
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<pre style="margin: 0;">+<span id="LC1252" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">seq</span><span class="p">-</span><span class="n" style="color: #333;">seq</span><span class="p">-</span><span class="n" style="color: #333;">pan</span></span>
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1253
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1253
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<pre style="margin: 0;"> <span id="LC1253" class="line" lang="mosel"><span class="n" style="color: #333;">Remark</span><span class="p">:</span> <span class="n" style="color: #333;">Needs</span> <span class="n" style="color: #333;">blat</span> <span class="n" style="color: #333;">which</span> <span class="n" style="color: #333;">is</span> <span class="k" style="font-weight: 600;">not</span> <span class="n" style="color: #333;">re</span><span class="p">-</span><span class="n" style="color: #333;">distributable</span></span>
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1254
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1254
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<pre style="margin: 0;"> <span id="LC1254" class="line" lang="mosel"></span>
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1255
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<pre style="margin: 0;">-<span id="LC1255" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">seqmagick</span></span>
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<pre style="margin: 0;">+<span id="LC1255" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">seqmagick</span></span>
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1256
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<pre style="margin: 0;"> <span id="LC1256" class="line" lang="mosel"></span>
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1257
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<pre style="margin: 0;">-<span id="LC1257" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">seqprep</span></span>
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1257
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<pre style="margin: 0;">+<span id="LC1257" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">seqprep</span></span>
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1258
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1258
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<pre style="margin: 0;"> <span id="LC1258" class="line" lang="mosel"></span>
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1259
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<pre style="margin: 0;">-<span id="LC1259" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">seqsero</span></span>
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1259
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<pre style="margin: 0;">+<span id="LC1259" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">seqsero</span></span>
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1260
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1260
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<pre style="margin: 0;"> <span id="LC1260" class="line" lang="mosel"></span>
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1261
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<pre style="margin: 0;">-<span id="LC1261" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">seqtk</span></span>
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1261
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<pre style="margin: 0;">+<span id="LC1261" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">seqtk</span></span>
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1262
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1262
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<pre style="margin: 0;"> <span id="LC1262" class="line" lang="mosel"></span>
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1263
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<pre style="margin: 0;">-<span id="LC1263" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">sequenceconverter</span><span class="p">.</span><span class="n" style="color: #333;">app</span></span>
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1263
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<pre style="margin: 0;">+<span id="LC1263" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">sequenceconverter</span><span class="p">.</span><span class="n" style="color: #333;">app</span></span>
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1264
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1264
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<pre style="margin: 0;"> <span id="LC1264" class="line" lang="mosel"><span class="n" style="color: #333;">Remark</span><span class="p">:</span> <span class="n" style="color: #333;">Formerly</span> <span class="n" style="color: #333;">part</span> <span class="k" style="font-weight: 600;">of</span> <span class="n" style="color: #333;">Debian</span> <span class="k" style="font-weight: 600;">as</span> <span class="n" style="color: #333;">biococoa</span><span class="p">.</span><span class="n" style="color: #333;">app</span> <span class="n" style="color: #333;">but</span> <span class="n" style="color: #333;">removed</span></span>
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1265
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1265
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<pre style="margin: 0;"> <span id="LC1265" class="line" lang="mosel"> <span class="n" style="color: #333;">The</span> <span class="k" style="font-weight: 600;">package</span> <span class="n" style="color: #333;">was</span> <span class="n" style="color: #333;">part</span> <span class="k" style="font-weight: 600;">of</span> <span class="n" style="color: #333;">Debian</span> <span class="n" style="color: #333;">under</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">name</span> <span class="n" style="color: #333;">biococoa</span><span class="p">.</span><span class="n" style="color: #333;">app</span> <span class="n" style="color: #333;">which</span> <span class="n" style="color: #333;">is</span> <span class="n" style="color: #333;">confusing</span></span>
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1266
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1266
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<pre style="margin: 0;"> <span id="LC1266" class="line" lang="mosel"> <span class="n" style="color: #333;">because</span> <span class="n" style="color: #333;">biococoa</span> <span class="n" style="color: #333;">is</span> <span class="n" style="color: #333;">actually</span> <span class="n" style="color: #333;">a</span> <span class="n" style="color: #333;">library</span> <span class="n" style="color: #333;">for</span> <span class="n" style="color: #333;">working</span> <span class="k" style="font-weight: 600;">with</span> <span class="n" style="color: #333;">sequences</span> <span class="n" style="color: #333;">under</span> <span class="n" style="color: #333;">GNUstep</span><span class="p">.</span></span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="1272" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="1272" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -1272,195 +1272,195 @@ Remark: Formerly part of Debian as biococoa.app but removed</td>
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1272
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1272
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<pre style="margin: 0;"> <span id="LC1272" class="line" lang="mosel"> <span class="n" style="color: #333;">newer</span> <span class="n" style="color: #333;">versions</span> <span class="n" style="color: #333;">are</span> <span class="n" style="color: #333;">needed</span> <span class="k" style="font-weight: 600;">to</span> <span class="n" style="color: #333;">work</span> <span class="n" style="color: #333;">under</span> <span class="n" style="color: #333;">Linux</span> <span class="n" style="color: #333;">try</span> <span class="k" style="font-weight: 600;">to</span> <span class="n" style="color: #333;">convince</span> <span class="n" style="color: #333;">upstream</span> <span class="k" style="font-weight: 600;">to</span></span>
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1273
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1273
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<pre style="margin: 0;"> <span id="LC1273" class="line" lang="mosel"> <span class="n" style="color: #333;">support</span> <span class="n" style="color: #333;">GNUstep</span><span class="p">.</span></span>
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1274
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1274
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<pre style="margin: 0;"> <span id="LC1274" class="line" lang="mosel"></span>
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1275
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<pre style="margin: 0;">-<span id="LC1275" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">seqwish</span></span>
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1275
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<pre style="margin: 0;">+<span id="LC1275" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">seqwish</span></span>
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1276
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1276
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<pre style="margin: 0;"> <span id="LC1276" class="line" lang="mosel"></span>
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1277
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<td class="diff-line-num new_line old" data-linenumber="1277" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC1277" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">sga</span></span>
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<td class="diff-line-num new new_line" data-linenumber="1277" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1277
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<pre style="margin: 0;">+<span id="LC1277" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">sga</span></span>
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1278
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1278
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<pre style="margin: 0;"> <span id="LC1278" class="line" lang="mosel"></span>
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1279
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<td class="diff-line-num new_line old" data-linenumber="1279" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC1279" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">shovill</span></span>
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1279
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<pre style="margin: 0;">+<span id="LC1279" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">shovill</span></span>
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1280
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1280
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<pre style="margin: 0;"> <span id="LC1280" class="line" lang="mosel"></span>
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<td class="diff-line-num old old_line" data-linenumber="1281" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1281
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<td class="diff-line-num new_line old" data-linenumber="1281" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC1281" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">signalalign</span></span>
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1281
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<pre style="margin: 0;">+<span id="LC1281" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">signalalign</span></span>
</pre>
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1282
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1282
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<pre style="margin: 0;"> <span id="LC1282" class="line" lang="mosel"></span>
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1283
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<td class="diff-line-num new_line old" data-linenumber="1283" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC1283" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">sibelia</span></span>
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<td class="diff-line-num new new_line" data-linenumber="1283" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1283
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<pre style="margin: 0;">+<span id="LC1283" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">sibelia</span></span>
</pre>
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1284
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1284
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<pre style="margin: 0;"> <span id="LC1284" class="line" lang="mosel"></span>
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<td class="diff-line-num old old_line" data-linenumber="1285" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1285
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<td class="diff-line-num new_line old" data-linenumber="1285" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC1285" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">sina</span></span>
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<td class="diff-line-num new old_line" data-linenumber="1286" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="1285" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1285
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<pre style="margin: 0;">+<span id="LC1285" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">sina</span></span>
</pre>
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1286
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1286
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<pre style="margin: 0;"> <span id="LC1286" class="line" lang="mosel"></span>
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1287
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<td class="diff-line-num new_line old" data-linenumber="1287" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC1287" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">sistr</span></span>
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1287
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<pre style="margin: 0;">+<span id="LC1287" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">sistr</span></span>
</pre>
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1288
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1288
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<pre style="margin: 0;"> <span id="LC1288" class="line" lang="mosel"></span>
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1289
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<td class="diff-line-num new_line old" data-linenumber="1289" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC1289" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">situs</span></span>
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1289
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<pre style="margin: 0;">+<span id="LC1289" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">situs</span></span>
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1290
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1290
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<pre style="margin: 0;"> <span id="LC1290" class="line" lang="mosel"></span>
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1291
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<pre style="margin: 0;">-<span id="LC1291" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">sim4db</span></span>
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1291
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<pre style="margin: 0;">+<span id="LC1291" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">sim4db</span></span>
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1292
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1292
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<pre style="margin: 0;"> <span id="LC1292" class="line" lang="mosel"></span>
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1293
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<td class="diff-line-num new_line old" data-linenumber="1293" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC1293" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">skesa</span></span>
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<td class="diff-line-num new old_line" data-linenumber="1294" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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1293
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<pre style="margin: 0;">+<span id="LC1293" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">skesa</span></span>
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1294
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1294
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<pre style="margin: 0;"> <span id="LC1294" class="line" lang="mosel"></span>
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<td class="diff-line-num old old_line" data-linenumber="1295" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1295
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<td class="diff-line-num new_line old" data-linenumber="1295" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC1295" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">smalt</span></span>
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<td class="diff-line-num new old_line" data-linenumber="1296" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="1295" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1295
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<pre style="margin: 0;">+<span id="LC1295" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">smalt</span></span>
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<td class="diff-line-num old_line" data-linenumber="1296" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1296
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<td class="diff-line-num new_line" data-linenumber="1296" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1296
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<pre style="margin: 0;"> <span id="LC1296" class="line" lang="mosel"><span class="n" style="color: #333;">Remark</span><span class="p">:</span> <span class="n" style="color: #333;">This</span> <span class="n" style="color: #333;">can</span> <span class="n" style="color: #333;">be</span> <span class="n" style="color: #333;">regarded</span> <span class="k" style="font-weight: 600;">as</span> <span class="n" style="color: #333;">successor</span> <span class="k" style="font-weight: 600;">of</span> <span class="n" style="color: #333;">ssaha2</span></span>
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<td class="diff-line-num old_line" data-linenumber="1297" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1297
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<td class="diff-line-num new_line" data-linenumber="1297" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1297
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<pre style="margin: 0;"> <span id="LC1297" class="line" lang="mosel"> <span class="n" style="color: #333;">This</span> <span class="n" style="color: #333;">program</span> <span class="n" style="color: #333;">is</span> <span class="k" style="font-weight: 600;">from</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">same</span> <span class="n" style="color: #333;">author</span> <span class="k" style="font-weight: 600;">as</span> <span class="n" style="color: #333;">ssaha2</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">according</span> <span class="k" style="font-weight: 600;">to</span> <span class="n" style="color: #333;">its</span> <span class="n" style="color: #333;">author</span></span>
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<td class="diff-line-num old_line" data-linenumber="1298" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1298
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<td class="diff-line-num new_line" data-linenumber="1298" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1298
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<pre style="margin: 0;"> <span id="LC1298" class="line" lang="mosel"> <span class="n" style="color: #333;">faster</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">more</span> <span class="n" style="color: #333;">precise</span> <span class="n" style="color: #333;">than</span> <span class="n" style="color: #333;">ssaha2</span> <span class="p">(</span><span class="n" style="color: #333;">except</span> <span class="n" style="color: #333;">for</span> <span class="n" style="color: #333;">sequences</span> <span class="p">></span> <span class="m" style="color: #099;">2000</span><span class="n" style="color: #333;">bp</span><span class="p">).</span></span>
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1299
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1299
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<pre style="margin: 0;"> <span id="LC1299" class="line" lang="mosel"></span>
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1300
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<td class="diff-line-num new_line old" data-linenumber="1300" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC1300" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">smithwaterman</span></span>
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<td class="diff-line-num new old_line" data-linenumber="1301" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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1300
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<pre style="margin: 0;">+<span id="LC1300" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">smithwaterman</span></span>
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1301
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1301
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<pre style="margin: 0;"> <span id="LC1301" class="line" lang="mosel"></span>
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<td class="diff-line-num old old_line" data-linenumber="1302" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1302
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<td class="diff-line-num new_line old" data-linenumber="1302" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC1302" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">smrtanalysis</span></span>
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<td class="diff-line-num new old_line" data-linenumber="1303" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="1302" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1302
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<pre style="margin: 0;">+<span id="LC1302" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">smrtanalysis</span></span>
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<td class="diff-line-num old_line" data-linenumber="1303" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1303
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<td class="diff-line-num new_line" data-linenumber="1303" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1303
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<pre style="margin: 0;"> <span id="LC1303" class="line" lang="mosel"></span>
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<td class="diff-line-num old old_line" data-linenumber="1304" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1304
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<td class="diff-line-num new_line old" data-linenumber="1304" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC1304" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">snpeff</span></span>
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<td class="diff-line-num new old_line" data-linenumber="1305" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="1304" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1304
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<pre style="margin: 0;">+<span id="LC1304" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">snpeff</span></span>
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1305
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1305
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<pre style="margin: 0;"> <span id="LC1305" class="line" lang="mosel"></span>
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<td class="diff-line-num old old_line" data-linenumber="1306" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1306
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<td class="diff-line-num new_line old" data-linenumber="1306" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC1306" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">snpomatic</span></span>
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1306
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<pre style="margin: 0;">+<span id="LC1306" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">snpomatic</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1307" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1307
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<td class="diff-line-num new_line" data-linenumber="1307" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1307
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<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC1307" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="1308" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1308
</td>
<td class="diff-line-num new_line old" data-linenumber="1308" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC1308" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">solvate</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="1309" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
</td>
<td class="diff-line-num new new_line" data-linenumber="1308" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1308
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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC1308" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">solvate</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1309" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1309
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<td class="diff-line-num new_line" data-linenumber="1309" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1309
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<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC1309" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="1310" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1310
</td>
<td class="diff-line-num new_line old" data-linenumber="1310" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
</td>
<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC1310" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">sortmerna</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="1311" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
</td>
<td class="diff-line-num new new_line" data-linenumber="1310" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1310
</td>
<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC1310" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">sortmerna</span></span>
</pre>
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<tr class="line_holder" id="" style="line-height: 1.6;">
<td class="diff-line-num old_line" data-linenumber="1311" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1311
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<td class="diff-line-num new_line" data-linenumber="1311" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1311
</td>
<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC1311" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="1312" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1312
</td>
<td class="diff-line-num new_line old" data-linenumber="1312" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
</td>
<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC1312" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">snap</span><span class="p">-</span><span class="n" style="color: #333;">aligner</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="1313" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
</td>
<td class="diff-line-num new new_line" data-linenumber="1312" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1312
</td>
<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC1312" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">snap</span><span class="p">-</span><span class="n" style="color: #333;">aligner</span></span>
</pre>
</td>
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<tr class="line_holder" id="" style="line-height: 1.6;">
<td class="diff-line-num old_line" data-linenumber="1313" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1313
</td>
<td class="diff-line-num new_line" data-linenumber="1313" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1313
</td>
<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC1313" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="1314" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1314
</td>
<td class="diff-line-num new_line old" data-linenumber="1314" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
</td>
<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC1314" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">sniffles</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="1315" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
</td>
<td class="diff-line-num new new_line" data-linenumber="1314" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1314
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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC1314" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">sniffles</span></span>
</pre>
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<tr class="line_holder" id="" style="line-height: 1.6;">
<td class="diff-line-num old_line" data-linenumber="1315" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1315
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<td class="diff-line-num new_line" data-linenumber="1315" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1315
</td>
<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC1315" class="line" lang="mosel"></span>
</pre>
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<tr class="line_holder old" id="" style="line-height: 1.6;">
<td class="diff-line-num old old_line" data-linenumber="1316" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1316
</td>
<td class="diff-line-num new_line old" data-linenumber="1316" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
</td>
<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC1316" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">sourmash</span></span>
</pre>
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<tr class="line_holder new" id="" style="line-height: 1.6;">
<td class="diff-line-num new old_line" data-linenumber="1317" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
</td>
<td class="diff-line-num new new_line" data-linenumber="1316" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1316
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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC1316" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">sourmash</span></span>
</pre>
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<tr class="line_holder" id="" style="line-height: 1.6;">
<td class="diff-line-num old_line" data-linenumber="1317" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1317
</td>
<td class="diff-line-num new_line" data-linenumber="1317" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1317
</td>
<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC1317" class="line" lang="mosel"></span>
</pre>
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<tr class="line_holder old" id="" style="line-height: 1.6;">
<td class="diff-line-num old old_line" data-linenumber="1318" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1318
</td>
<td class="diff-line-num new_line old" data-linenumber="1318" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
</td>
<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC1318" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">spaced</span></span>
</pre>
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<tr class="line_holder new" id="" style="line-height: 1.6;">
<td class="diff-line-num new old_line" data-linenumber="1319" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
</td>
<td class="diff-line-num new new_line" data-linenumber="1318" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1318
</td>
<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC1318" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">spaced</span></span>
</pre>
</td>
</tr>
<tr class="line_holder" id="" style="line-height: 1.6;">
<td class="diff-line-num old_line" data-linenumber="1319" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1319
</td>
<td class="diff-line-num new_line" data-linenumber="1319" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1319
</td>
<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC1319" class="line" lang="mosel"></span>
</pre>
</td>
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<tr class="line_holder old" id="" style="line-height: 1.6;">
<td class="diff-line-num old old_line" data-linenumber="1320" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1320
</td>
<td class="diff-line-num new_line old" data-linenumber="1320" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
</td>
<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC1320" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">spades</span></span>
</pre>
</td>
</tr>
<tr class="line_holder new" id="" style="line-height: 1.6;">
<td class="diff-line-num new old_line" data-linenumber="1321" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
</td>
<td class="diff-line-num new new_line" data-linenumber="1320" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1320
</td>
<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC1320" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">spades</span></span>
</pre>
</td>
</tr>
<tr class="line_holder" id="" style="line-height: 1.6;">
<td class="diff-line-num old_line" data-linenumber="1321" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1321
</td>
<td class="diff-line-num new_line" data-linenumber="1321" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1321
</td>
<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC1321" class="line" lang="mosel"></span>
</pre>
</td>
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<tr class="line_holder old" id="" style="line-height: 1.6;">
<td class="diff-line-num old old_line" data-linenumber="1322" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1322
</td>
<td class="diff-line-num new_line old" data-linenumber="1322" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
</td>
<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC1322" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">spaln</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="1323" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="1322" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1322
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<pre style="margin: 0;">+<span id="LC1322" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">spaln</span></span>
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<td class="diff-line-num old_line" data-linenumber="1323" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1323
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<td class="diff-line-num new_line" data-linenumber="1323" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1323
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<pre style="margin: 0;"> <span id="LC1323" class="line" lang="mosel"></span>
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<td class="diff-line-num old old_line" data-linenumber="1324" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1324
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<td class="diff-line-num new_line old" data-linenumber="1324" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC1324" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">sparta</span></span>
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<td class="diff-line-num new old_line" data-linenumber="1325" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="1324" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1324
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<pre style="margin: 0;">+<span id="LC1324" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">sparta</span></span>
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<td class="diff-line-num old_line" data-linenumber="1325" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1325
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<td class="diff-line-num new_line" data-linenumber="1325" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1325
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<pre style="margin: 0;"> <span id="LC1325" class="line" lang="mosel"></span>
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<td class="diff-line-num old old_line" data-linenumber="1326" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1326
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<td class="diff-line-num new_line old" data-linenumber="1326" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC1326" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">sprai</span></span>
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<td class="diff-line-num new old_line" data-linenumber="1327" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="1326" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1326
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<pre style="margin: 0;">+<span id="LC1326" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">sprai</span></span>
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<td class="diff-line-num old_line" data-linenumber="1327" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1327
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<td class="diff-line-num new_line" data-linenumber="1327" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1327
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<pre style="margin: 0;"> <span id="LC1327" class="line" lang="mosel"></span>
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<td class="diff-line-num old old_line" data-linenumber="1328" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1328
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<td class="diff-line-num new_line old" data-linenumber="1328" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC1328" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">srst2</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="1329" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="1328" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1328
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<pre style="margin: 0;">+<span id="LC1328" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">srst2</span></span>
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<td class="diff-line-num old_line" data-linenumber="1329" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1329
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<td class="diff-line-num new_line" data-linenumber="1329" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1329
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<pre style="margin: 0;"> <span id="LC1329" class="line" lang="mosel"></span>
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<td class="diff-line-num old old_line" data-linenumber="1330" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1330
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<td class="diff-line-num new_line old" data-linenumber="1330" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC1330" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">ssaha</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="1331" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="1330" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1330
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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC1330" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">ssaha</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1331" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1331
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<td class="diff-line-num new_line" data-linenumber="1331" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1331
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<pre style="margin: 0;"> <span id="LC1331" class="line" lang="mosel"><span class="n" style="color: #333;">Remark</span><span class="p">:</span> <span class="n" style="color: #333;">Successor</span> <span class="n" style="color: #333;">for</span> <span class="n" style="color: #333;">ssaha2</span> <span class="n" style="color: #333;">available</span><span class="p">:</span> <span class="n" style="color: #333;">smalt</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1332" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1332
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<td class="diff-line-num new_line" data-linenumber="1332" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1332
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<pre style="margin: 0;"> <span id="LC1332" class="line" lang="mosel"> <span class="n" style="color: #333;">The</span> <span class="n" style="color: #333;">program</span> <span class="n" style="color: #333;">smalt</span> <span class="n" style="color: #333;">is</span> <span class="k" style="font-weight: 600;">from</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">same</span> <span class="n" style="color: #333;">author</span> <span class="n" style="color: #333;">is</span> <span class="n" style="color: #333;">according</span> <span class="k" style="font-weight: 600;">to</span> <span class="n" style="color: #333;">its</span> <span class="n" style="color: #333;">author</span></span>
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<td class="diff-line-num old_line" data-linenumber="1333" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1333
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<td class="diff-line-num new_line" data-linenumber="1333" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1333
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<pre style="margin: 0;"> <span id="LC1333" class="line" lang="mosel"> <span class="n" style="color: #333;">faster</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">more</span> <span class="n" style="color: #333;">precise</span> <span class="n" style="color: #333;">than</span> <span class="n" style="color: #333;">ssaha2</span> <span class="p">(</span><span class="n" style="color: #333;">except</span> <span class="n" style="color: #333;">for</span> <span class="n" style="color: #333;">sequences</span> <span class="p">></span> <span class="m" style="color: #099;">2000</span><span class="n" style="color: #333;">bp</span><span class="p">)</span></span>
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1334
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1334
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<pre style="margin: 0;"> <span id="LC1334" class="line" lang="mosel"></span>
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<td class="diff-line-num old old_line" data-linenumber="1335" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1335
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<td class="diff-line-num new_line old" data-linenumber="1335" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC1335" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">sspace</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="1336" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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1335
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<pre style="margin: 0;">+<span id="LC1335" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">sspace</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1336" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1336
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1336
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<pre style="margin: 0;"> <span id="LC1336" class="line" lang="mosel"></span>
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<td class="diff-line-num old old_line" data-linenumber="1337" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1337
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<td class="diff-line-num new_line old" data-linenumber="1337" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC1337" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">ssw</span><span class="p">-</span><span class="n" style="color: #333;">align</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="1338" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="1337" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1337
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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC1337" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">ssw</span><span class="p">-</span><span class="n" style="color: #333;">align</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1338" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1338
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1338
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<pre style="margin: 0;"> <span id="LC1338" class="line" lang="mosel"></span>
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1339
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<td class="diff-line-num new_line old" data-linenumber="1339" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC1339" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">staden</span></span>
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1339
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<pre style="margin: 0;">+<span id="LC1339" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">staden</span></span>
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1340
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1340
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<pre style="margin: 0;"> <span id="LC1340" class="line" lang="mosel"></span>
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1341
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<td class="diff-line-num new_line old" data-linenumber="1341" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC1341" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">stacks</span></span>
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1341
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<pre style="margin: 0;">+<span id="LC1341" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">stacks</span></span>
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1342
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1342
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<pre style="margin: 0;"> <span id="LC1342" class="line" lang="mosel"></span>
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<td class="diff-line-num old old_line" data-linenumber="1343" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1343
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<td class="diff-line-num new_line old" data-linenumber="1343" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC1343" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">strap</span><span class="p">,</span> <span class="n" style="color: #333;">strap</span><span class="p">-</span><span class="n" style="color: #333;">base</span></span>
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<td class="diff-line-num new old_line" data-linenumber="1344" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="1343" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1343
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<pre style="margin: 0;">+<span id="LC1343" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">strap</span><span class="p">,</span> <span class="n" style="color: #333;">strap</span><span class="p">-</span><span class="n" style="color: #333;">base</span></span>
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1344
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<td class="diff-line-num new_line" data-linenumber="1344" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1344
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<pre style="margin: 0;"> <span id="LC1344" class="line" lang="mosel"><span class="n" style="color: #333;">Language</span><span class="p">:</span> <span class="n" style="color: #333;">Java</span></span>
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<td class="diff-line-num old_line" data-linenumber="1345" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1345
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<td class="diff-line-num new_line" data-linenumber="1345" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1345
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<pre style="margin: 0;"> <span id="LC1345" class="line" lang="mosel"></span>
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<td class="diff-line-num old old_line" data-linenumber="1346" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1346
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<td class="diff-line-num new_line old" data-linenumber="1346" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC1346" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">strelka</span></span>
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<td class="diff-line-num new old_line" data-linenumber="1347" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="1346" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1346
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<pre style="margin: 0;">+<span id="LC1346" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">strelka</span></span>
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1347
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1347
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<pre style="margin: 0;"> <span id="LC1347" class="line" lang="mosel"></span>
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<td class="diff-line-num old old_line" data-linenumber="1348" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1348
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<td class="diff-line-num new_line old" data-linenumber="1348" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC1348" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">stringtie</span></span>
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<td class="diff-line-num new old_line" data-linenumber="1349" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="1348" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1348
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<pre style="margin: 0;">+<span id="LC1348" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">stringtie</span></span>
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1349
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1349
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<pre style="margin: 0;"> <span id="LC1349" class="line" lang="mosel"></span>
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1350
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<td class="diff-line-num new_line old" data-linenumber="1350" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC1350" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">subread</span></span>
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1350
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<pre style="margin: 0;">+<span id="LC1350" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">subread</span></span>
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1351
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<td class="diff-line-num new_line" data-linenumber="1351" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1351
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<pre style="margin: 0;"> <span id="LC1351" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="1352" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1352
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<td class="diff-line-num new_line old" data-linenumber="1352" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC1352" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">suitename</span></span>
</pre>
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1352
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<pre style="margin: 0;">+<span id="LC1352" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">suitename</span></span>
</pre>
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1353
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<td class="diff-line-num new_line" data-linenumber="1353" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1353
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<pre style="margin: 0;"> <span id="LC1353" class="line" lang="mosel"></span>
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<td class="diff-line-num old old_line" data-linenumber="1354" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1354
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<td class="diff-line-num new_line old" data-linenumber="1354" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC1354" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">sumatra</span><span class="p">,</span> <span class="n" style="color: #333;">sumaclust</span></span>
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<td class="diff-line-num new new_line" data-linenumber="1354" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1354
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<pre style="margin: 0;">+<span id="LC1354" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">sumatra</span><span class="p">,</span> <span class="n" style="color: #333;">sumaclust</span></span>
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1355
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<td class="diff-line-num new_line" data-linenumber="1355" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1355
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<pre style="margin: 0;"> <span id="LC1355" class="line" lang="mosel"></span>
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<td class="diff-line-num old old_line" data-linenumber="1356" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1356
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<td class="diff-line-num new_line old" data-linenumber="1356" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC1356" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">sumtrees</span></span>
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<td class="diff-line-num new new_line" data-linenumber="1356" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1356
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<pre style="margin: 0;">+<span id="LC1356" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">sumtrees</span></span>
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1357
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<td class="diff-line-num new_line" data-linenumber="1357" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1357
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<pre style="margin: 0;"> <span id="LC1357" class="line" lang="mosel"></span>
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<td class="diff-line-num old old_line" data-linenumber="1358" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1358
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<td class="diff-line-num new_line old" data-linenumber="1358" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC1358" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">surankco</span></span>
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<td class="diff-line-num new old_line" data-linenumber="1359" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="1358" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1358
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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC1358" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">surankco</span></span>
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1359
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<td class="diff-line-num new_line" data-linenumber="1359" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1359
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<pre style="margin: 0;"> <span id="LC1359" class="line" lang="mosel"></span>
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<td class="diff-line-num old old_line" data-linenumber="1360" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1360
</td>
<td class="diff-line-num new_line old" data-linenumber="1360" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC1360" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">swarm</span></span>
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<td class="diff-line-num new old_line" data-linenumber="1361" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="1360" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1360
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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC1360" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">swarm</span></span>
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1361
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<td class="diff-line-num new_line" data-linenumber="1361" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1361
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<pre style="margin: 0;"> <span id="LC1361" class="line" lang="mosel"></span>
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<td class="diff-line-num old old_line" data-linenumber="1362" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1362
</td>
<td class="diff-line-num new_line old" data-linenumber="1362" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC1362" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">tacg</span></span>
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<td class="diff-line-num new old_line" data-linenumber="1363" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="1362" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1362
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<pre style="margin: 0;">+<span id="LC1362" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">tacg</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1363" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1363
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<td class="diff-line-num new_line" data-linenumber="1363" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1363
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<pre style="margin: 0;"> <span id="LC1363" class="line" lang="mosel"><span class="n" style="color: #333;">X</span><span class="p">-</span><span class="n" style="color: #333;">Category</span><span class="p">:</span> <span class="n" style="color: #333;">Motif</span> <span class="n" style="color: #333;">detection</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1364" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1364
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<td class="diff-line-num new_line" data-linenumber="1364" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1364
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<pre style="margin: 0;"> <span id="LC1364" class="line" lang="mosel"><span class="n" style="color: #333;">X</span><span class="p">-</span><span class="n" style="color: #333;">Importance</span><span class="p">:</span> <span class="n" style="color: #333;">powerful</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1365" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1365
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<td class="diff-line-num new_line" data-linenumber="1365" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1365
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<pre style="margin: 0;"> <span id="LC1365" class="line" lang="mosel"></span>
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<td class="diff-line-num old old_line" data-linenumber="1366" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1366
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<td class="diff-line-num new_line old" data-linenumber="1366" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC1366" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">tantan</span></span>
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<td class="diff-line-num new old_line" data-linenumber="1367" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="1366" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1366
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<pre style="margin: 0;">+<span id="LC1366" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">tantan</span></span>
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1367
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<td class="diff-line-num new_line" data-linenumber="1367" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1367
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<pre style="margin: 0;"> <span id="LC1367" class="line" lang="mosel"></span>
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<td class="diff-line-num old old_line" data-linenumber="1368" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1368
</td>
<td class="diff-line-num new_line old" data-linenumber="1368" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC1368" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">thesias</span></span>
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<td class="diff-line-num new old_line" data-linenumber="1369" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="1368" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1368
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<pre style="margin: 0;">+<span id="LC1368" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">thesias</span></span>
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1369
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<td class="diff-line-num new_line" data-linenumber="1369" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1369
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<pre style="margin: 0;"> <span id="LC1369" class="line" lang="mosel"></span>
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<td class="diff-line-num old old_line" data-linenumber="1370" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1370
</td>
<td class="diff-line-num new_line old" data-linenumber="1370" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC1370" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">tiddit</span></span>
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1370
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<pre style="margin: 0;">+<span id="LC1370" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">tiddit</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1371" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1371
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<td class="diff-line-num new_line" data-linenumber="1371" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1371
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<pre style="margin: 0;"> <span id="LC1371" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="1372" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1372
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<td class="diff-line-num new_line old" data-linenumber="1372" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC1372" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">toppred</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="1373" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="1372" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1372
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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC1372" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">toppred</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1373" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1373
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<td class="diff-line-num new_line" data-linenumber="1373" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1373
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<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC1373" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="1374" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1374
</td>
<td class="diff-line-num new_line old" data-linenumber="1374" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC1374" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">transdecoder</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="1375" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="1374" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1374
</td>
<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC1374" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">transdecoder</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1375" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1375
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<td class="diff-line-num new_line" data-linenumber="1375" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1375
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<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC1375" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="1376" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1376
</td>
<td class="diff-line-num new_line old" data-linenumber="1376" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
</td>
<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC1376" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">tnseq</span><span class="p">-</span><span class="n" style="color: #333;">transit</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="1377" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="1376" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1376
</td>
<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC1376" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">tnseq</span><span class="p">-</span><span class="n" style="color: #333;">transit</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1377" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1377
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<td class="diff-line-num new_line" data-linenumber="1377" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1377
</td>
<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC1377" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="1378" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1378
</td>
<td class="diff-line-num new_line old" data-linenumber="1378" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
</td>
<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC1378" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">tn</span><span class="p">-</span><span class="n" style="color: #333;">seqexplorer</span></span>
</pre>
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<tr class="line_holder new" id="" style="line-height: 1.6;">
<td class="diff-line-num new old_line" data-linenumber="1379" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
</td>
<td class="diff-line-num new new_line" data-linenumber="1378" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1378
</td>
<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC1378" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">tn</span><span class="p">-</span><span class="n" style="color: #333;">seqexplorer</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1379" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1379
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<td class="diff-line-num new_line" data-linenumber="1379" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1379
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<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC1379" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="1380" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1380
</td>
<td class="diff-line-num new_line old" data-linenumber="1380" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
</td>
<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC1380" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">toil</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="1381" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
</td>
<td class="diff-line-num new new_line" data-linenumber="1380" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1380
</td>
<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC1380" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">toil</span></span>
</pre>
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</tr>
<tr class="line_holder" id="" style="line-height: 1.6;">
<td class="diff-line-num old_line" data-linenumber="1381" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1381
</td>
<td class="diff-line-num new_line" data-linenumber="1381" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1381
</td>
<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC1381" class="line" lang="mosel"></span>
</pre>
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<tr class="line_holder old" id="" style="line-height: 1.6;">
<td class="diff-line-num old old_line" data-linenumber="1382" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1382
</td>
<td class="diff-line-num new_line old" data-linenumber="1382" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
</td>
<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC1382" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">tombo</span></span>
</pre>
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<tr class="line_holder new" id="" style="line-height: 1.6;">
<td class="diff-line-num new old_line" data-linenumber="1383" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
</td>
<td class="diff-line-num new new_line" data-linenumber="1382" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1382
</td>
<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC1382" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">tombo</span></span>
</pre>
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<tr class="line_holder" id="" style="line-height: 1.6;">
<td class="diff-line-num old_line" data-linenumber="1383" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1383
</td>
<td class="diff-line-num new_line" data-linenumber="1383" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1383
</td>
<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC1383" class="line" lang="mosel"></span>
</pre>
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<tr class="line_holder old" id="" style="line-height: 1.6;">
<td class="diff-line-num old old_line" data-linenumber="1384" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1384
</td>
<td class="diff-line-num new_line old" data-linenumber="1384" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
</td>
<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC1384" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">tracetuner</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="1385" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
</td>
<td class="diff-line-num new new_line" data-linenumber="1384" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1384
</td>
<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC1384" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">tracetuner</span></span>
</pre>
</td>
</tr>
<tr class="line_holder" id="" style="line-height: 1.6;">
<td class="diff-line-num old_line" data-linenumber="1385" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1385
</td>
<td class="diff-line-num new_line" data-linenumber="1385" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1385
</td>
<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC1385" class="line" lang="mosel"></span>
</pre>
</td>
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<tr class="line_holder old" id="" style="line-height: 1.6;">
<td class="diff-line-num old old_line" data-linenumber="1386" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1386
</td>
<td class="diff-line-num new_line old" data-linenumber="1386" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
</td>
<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC1386" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">transrate</span><span class="p">-</span><span class="n" style="color: #333;">tools</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="1387" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="1386" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1386
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<pre style="margin: 0;">+<span id="LC1386" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">transrate</span><span class="p">-</span><span class="n" style="color: #333;">tools</span></span>
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1387
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<td class="diff-line-num new_line" data-linenumber="1387" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1387
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<pre style="margin: 0;"> <span id="LC1387" class="line" lang="mosel"></span>
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<td class="diff-line-num old old_line" data-linenumber="1388" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1388
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<td class="diff-line-num new_line old" data-linenumber="1388" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC1388" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">treeview</span></span>
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<td class="diff-line-num new old_line" data-linenumber="1389" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="1388" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1388
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<pre style="margin: 0;">+<span id="LC1388" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">treeview</span></span>
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<td class="diff-line-num old_line" data-linenumber="1389" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1389
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<td class="diff-line-num new_line" data-linenumber="1389" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1389
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<pre style="margin: 0;"> <span id="LC1389" class="line" lang="mosel"><span class="n" style="color: #333;">X</span><span class="p">-</span><span class="n" style="color: #333;">Category</span><span class="p">:</span> <span class="n" style="color: #333;">Visualisation</span></span>
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<td class="diff-line-num old_line" data-linenumber="1390" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1390
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<td class="diff-line-num new_line" data-linenumber="1390" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1390
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<pre style="margin: 0;"> <span id="LC1390" class="line" lang="mosel"></span>
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<td class="diff-line-num old_line" data-linenumber="1391" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1391
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<td class="diff-line-num new_line" data-linenumber="1391" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1391
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<pre style="margin: 0;"> <span id="LC1391" class="line" lang="mosel"><span class="n" style="color: #333;">X</span><span class="p">-</span><span class="n" style="color: #333;">Recommends</span><span class="p">:</span> <span class="n" style="color: #333;">treevolve</span></span>
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<td class="diff-line-num old_line" data-linenumber="1392" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1392
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<td class="diff-line-num new_line" data-linenumber="1392" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1392
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<pre style="margin: 0;"> <span id="LC1392" class="line" lang="mosel"><span class="n" style="color: #333;">X</span><span class="p">-</span><span class="n" style="color: #333;">Comment</span><span class="p">:</span> <span class="n" style="color: #333;">Homepage</span> <span class="k" style="font-weight: 600;">of</span> <span class="n" style="color: #333;">software</span> <span class="n" style="color: #333;">vanished</span><span class="p">,</span> <span class="n" style="color: #333;">packaging</span> <span class="k" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">SVN</span> <span class="n" style="color: #333;">is</span> <span class="n" style="color: #333;">obviosely</span> <span class="n" style="color: #333;">stalled</span></span>
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<td class="diff-line-num old_line" data-linenumber="1393" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1393
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<td class="diff-line-num new_line" data-linenumber="1393" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1393
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<pre style="margin: 0;"> <span id="LC1393" class="line" lang="mosel"> <span class="n" style="color: #333;">Feel</span> <span class="n" style="color: #333;">free</span> <span class="k" style="font-weight: 600;">to</span> <span class="n" style="color: #333;">delete</span> <span class="n" style="color: #333;">the</span> <span class="s1" style="color: #d14;">'X-'</span> <span class="k" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">front</span> <span class="k" style="font-weight: 600;">if</span> <span class="n" style="color: #333;">you</span> <span class="n" style="color: #333;">intend</span> <span class="k" style="font-weight: 600;">to</span> <span class="k" style="font-weight: 600;">do</span> <span class="n" style="color: #333;">something</span> <span class="n" style="color: #333;">on</span> <span class="n" style="color: #333;">this</span> <span class="k" style="font-weight: 600;">package</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1394" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1394
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<td class="diff-line-num new_line" data-linenumber="1394" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1394
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<pre style="margin: 0;"> <span id="LC1394" class="line" lang="mosel"></span>
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<td class="diff-line-num old old_line" data-linenumber="1395" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1395
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<td class="diff-line-num new_line old" data-linenumber="1395" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC1395" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">trinityrnaseq</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="1396" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="1395" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1395
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<pre style="margin: 0;">+<span id="LC1395" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">trinityrnaseq</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1396" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1396
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<td class="diff-line-num new_line" data-linenumber="1396" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1396
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<pre style="margin: 0;"> <span id="LC1396" class="line" lang="mosel"></span>
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<td class="diff-line-num old old_line" data-linenumber="1397" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1397
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<td class="diff-line-num new_line old" data-linenumber="1397" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC1397" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">uc</span><span class="p">-</span><span class="n" style="color: #333;">echo</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="1398" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="1397" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1397
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<pre style="margin: 0;">+<span id="LC1397" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">uc</span><span class="p">-</span><span class="n" style="color: #333;">echo</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1398" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1398
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<td class="diff-line-num new_line" data-linenumber="1398" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1398
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<pre style="margin: 0;"> <span id="LC1398" class="line" lang="mosel"><span class="n" style="color: #333;">X</span><span class="p">-</span><span class="n" style="color: #333;">Category</span><span class="p">:</span> <span class="n" style="color: #333;">NGS</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1399" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1399
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<td class="diff-line-num new_line" data-linenumber="1399" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1399
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<pre style="margin: 0;"> <span id="LC1399" class="line" lang="mosel"></span>
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<td class="diff-line-num old old_line" data-linenumber="1400" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1400
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<td class="diff-line-num new_line old" data-linenumber="1400" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC1400" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">ufasta</span></span>
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<td class="diff-line-num new old_line" data-linenumber="1401" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="1400" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1400
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<pre style="margin: 0;">+<span id="LC1400" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">ufasta</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1401" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1401
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<td class="diff-line-num new_line" data-linenumber="1401" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1401
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<pre style="margin: 0;"> <span id="LC1401" class="line" lang="mosel"></span>
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<td class="diff-line-num old old_line" data-linenumber="1402" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1402
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<td class="diff-line-num new_line old" data-linenumber="1402" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC1402" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">umap</span><span class="p">-</span><span class="n" style="color: #333;">learn</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="1403" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="1402" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1402
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<pre style="margin: 0;">+<span id="LC1402" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">umap</span><span class="p">-</span><span class="n" style="color: #333;">learn</span></span>
</pre>
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1403
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<td class="diff-line-num new_line" data-linenumber="1403" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1403
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<pre style="margin: 0;"> <span id="LC1403" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="1404" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1404
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<td class="diff-line-num new_line old" data-linenumber="1404" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC1404" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">umis</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="1405" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="1404" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1404
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<pre style="margin: 0;">+<span id="LC1404" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">umis</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1405" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1405
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<td class="diff-line-num new_line" data-linenumber="1405" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1405
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<pre style="margin: 0;"> <span id="LC1405" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="1406" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1406
</td>
<td class="diff-line-num new_line old" data-linenumber="1406" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC1406" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">unanimity</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="1407" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="1406" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1406
</td>
<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC1406" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">unanimity</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1407" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1407
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<td class="diff-line-num new_line" data-linenumber="1407" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1407
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<pre style="margin: 0;"> <span id="LC1407" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="1408" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1408
</td>
<td class="diff-line-num new_line old" data-linenumber="1408" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC1408" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">unicycler</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="1409" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="1408" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1408
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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC1408" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">unicycler</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1409" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1409
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<td class="diff-line-num new_line" data-linenumber="1409" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1409
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<pre style="margin: 0;"> <span id="LC1409" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="1410" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1410
</td>
<td class="diff-line-num new_line old" data-linenumber="1410" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC1410" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">varna</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="1411" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="1410" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1410
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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC1410" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">varna</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1411" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1411
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<td class="diff-line-num new_line" data-linenumber="1411" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1411
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<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC1411" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="1412" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1412
</td>
<td class="diff-line-num new_line old" data-linenumber="1412" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC1412" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">varmatch</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="1413" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
</td>
<td class="diff-line-num new new_line" data-linenumber="1412" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1412
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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC1412" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">varmatch</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1413" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1413
</td>
<td class="diff-line-num new_line" data-linenumber="1413" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1413
</td>
<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC1413" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="1414" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1414
</td>
<td class="diff-line-num new_line old" data-linenumber="1414" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC1414" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">varscan</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="1415" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
</td>
<td class="diff-line-num new new_line" data-linenumber="1414" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1414
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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC1414" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">varscan</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1415" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1415
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<td class="diff-line-num new_line" data-linenumber="1415" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1415
</td>
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<pre style="margin: 0;"> <span id="LC1415" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="1416" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1416
</td>
<td class="diff-line-num new_line old" data-linenumber="1416" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC1416" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">vcfanno</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="1417" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
</td>
<td class="diff-line-num new new_line" data-linenumber="1416" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1416
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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC1416" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">vcfanno</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1417" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1417
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<td class="diff-line-num new_line" data-linenumber="1417" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1417
</td>
<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC1417" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="1418" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1418
</td>
<td class="diff-line-num new_line old" data-linenumber="1418" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC1418" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">vdjtools</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="1419" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
</td>
<td class="diff-line-num new new_line" data-linenumber="1418" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1418
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<pre style="margin: 0;">+<span id="LC1418" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">vdjtools</span></span>
</pre>
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1419
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1419
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<pre style="margin: 0;"> <span id="LC1419" class="line" lang="mosel"></span>
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1420
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<td class="diff-line-num new_line old" data-linenumber="1420" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC1420" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">vg</span></span>
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1420
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<pre style="margin: 0;">+<span id="LC1420" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">vg</span></span>
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1421
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1421
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<pre style="margin: 0;"> <span id="LC1421" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="1422" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1422
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<td class="diff-line-num new_line old" data-linenumber="1422" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC1422" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">vienna</span><span class="p">-</span><span class="n" style="color: #333;">rna</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="1423" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="1422" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1422
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<pre style="margin: 0;">+<span id="LC1422" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">vienna</span><span class="p">-</span><span class="n" style="color: #333;">rna</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1423" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1423
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<td class="diff-line-num new_line" data-linenumber="1423" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1423
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<pre style="margin: 0;"> <span id="LC1423" class="line" lang="mosel"><span class="n" style="color: #333;">X</span><span class="p">-</span><span class="n" style="color: #333;">Category</span><span class="p">:</span> <span class="n" style="color: #333;">Secondary</span> <span class="n" style="color: #333;">structure</span> <span class="k" style="font-weight: 600;">of</span> <span class="n" style="color: #333;">nucleic</span> <span class="n" style="color: #333;">acids</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1424" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1424
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1424
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<pre style="margin: 0;"> <span id="LC1424" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="1425" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1425
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<td class="diff-line-num new_line old" data-linenumber="1425" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC1425" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">virulencefinder</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="1426" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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1425
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<pre style="margin: 0;">+<span id="LC1425" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">virulencefinder</span></span>
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1426
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1426
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<pre style="margin: 0;"> <span id="LC1426" class="line" lang="mosel"></span>
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<td class="diff-line-num old old_line" data-linenumber="1427" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1427
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<td class="diff-line-num new_line old" data-linenumber="1427" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC1427" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">vmatch</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="1428" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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1427
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<pre style="margin: 0;">+<span id="LC1427" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">vmatch</span></span>
</pre>
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1428
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1428
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<pre style="margin: 0;"> <span id="LC1428" class="line" lang="mosel"></span>
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<td class="diff-line-num old old_line" data-linenumber="1429" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1429
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<td class="diff-line-num new_line old" data-linenumber="1429" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC1429" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">vmd</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="1430" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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1429
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<pre style="margin: 0;">+<span id="LC1429" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">vmd</span></span>
</pre>
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1430
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1430
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<pre style="margin: 0;"> <span id="LC1430" class="line" lang="mosel"></span>
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<td class="diff-line-num old old_line" data-linenumber="1431" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1431
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<td class="diff-line-num new_line old" data-linenumber="1431" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC1431" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">vsearch</span></span>
</pre>
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1431
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<pre style="margin: 0;">+<span id="LC1431" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">vsearch</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1432" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1432
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1432
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<pre style="margin: 0;"> <span id="LC1432" class="line" lang="mosel"></span>
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<td class="diff-line-num old old_line" data-linenumber="1433" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1433
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<td class="diff-line-num new_line old" data-linenumber="1433" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC1433" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">vt</span></span>
</pre>
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1433
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<pre style="margin: 0;">+<span id="LC1433" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">vt</span></span>
</pre>
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1434
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1434
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<pre style="margin: 0;"> <span id="LC1434" class="line" lang="mosel"></span>
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1435
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<pre style="margin: 0;">-<span id="LC1435" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">yaha</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="1436" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="1435" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1435
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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC1435" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">yaha</span></span>
</pre>
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1436
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<td class="diff-line-num new_line" data-linenumber="1436" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1436
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<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC1436" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="1437" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1437
</td>
<td class="diff-line-num new_line old" data-linenumber="1437" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC1437" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">yanagiba</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="1438" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="1437" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1437
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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC1437" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">yanagiba</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1438" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1438
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<td class="diff-line-num new_line" data-linenumber="1438" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1438
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<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC1438" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="1439" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1439
</td>
<td class="diff-line-num new_line old" data-linenumber="1439" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC1439" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">yanosim</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="1440" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="1439" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1439
</td>
<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC1439" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">yanosim</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1440" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1440
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<td class="diff-line-num new_line" data-linenumber="1440" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1440
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<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC1440" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="1441" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1441
</td>
<td class="diff-line-num new_line old" data-linenumber="1441" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC1441" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">canu</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="1442" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="1441" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1441
</td>
<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC1441" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">canu</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1442" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1442
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<td class="diff-line-num new_line" data-linenumber="1442" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1442
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<pre style="margin: 0;"> <span id="LC1442" class="line" lang="mosel"><span class="n" style="color: #333;">Remark</span><span class="p">:</span> <span class="n" style="color: #333;">Genome</span> <span class="n" style="color: #333;">assembly</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">large</span><span class="p">-</span><span class="n" style="color: #333;">scale</span> <span class="n" style="color: #333;">genome</span> <span class="n" style="color: #333;">alignment</span> <span class="p">(</span><span class="n" style="color: #333;">http</span><span class="p">://</span><span class="n" style="color: #333;">www</span><span class="p">.</span><span class="n" style="color: #333;">cbcb</span><span class="p">.</span><span class="n" style="color: #333;">umd</span><span class="p">.</span><span class="n" style="color: #333;">edu</span><span class="p">/</span><span class="n" style="color: #333;">software</span><span class="p">/)</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1443" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1443
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<td class="diff-line-num new_line" data-linenumber="1443" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1443
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<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC1443" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="1444" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1444
</td>
<td class="diff-line-num new_line old" data-linenumber="1444" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC1444" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">zalign</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="1445" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="1444" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1444
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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC1444" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">zalign</span></span>
</pre>
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<tr class="line_holder" id="" style="line-height: 1.6;">
<td class="diff-line-num old_line" data-linenumber="1445" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1445
</td>
<td class="diff-line-num new_line" data-linenumber="1445" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1445
</td>
<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC1445" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="1446" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1446
</td>
<td class="diff-line-num new_line old" data-linenumber="1446" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC1446" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">zodiac</span><span class="p">-</span><span class="n" style="color: #333;">zeden</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="1447" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="1446" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1446
</td>
<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC1446" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">zodiac</span><span class="p">-</span><span class="n" style="color: #333;">zeden</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1447" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1447
</td>
<td class="diff-line-num new_line" data-linenumber="1447" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1447
</td>
<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC1447" class="line" lang="mosel"><span class="n" style="color: #333;">Language</span><span class="p">:</span> <span class="n" style="color: #333;">C</span><span class="p">,</span> <span class="n" style="color: #333;">C</span><span class="p">++</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1448" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1448
</td>
<td class="diff-line-num new_line" data-linenumber="1448" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1448
</td>
<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC1448" class="line" lang="mosel"></span>
</pre>
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<tr class="line_holder old" id="" style="line-height: 1.6;">
<td class="diff-line-num old old_line" data-linenumber="1449" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1449
</td>
<td class="diff-line-num new_line old" data-linenumber="1449" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC1449" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">discosnp</span><span class="p">,</span> <span class="n" style="color: #333;">mapsembler2</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="1450" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
</td>
<td class="diff-line-num new new_line" data-linenumber="1449" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1449
</td>
<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC1449" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">discosnp</span><span class="p">,</span> <span class="n" style="color: #333;">mapsembler2</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1450" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1450
</td>
<td class="diff-line-num new_line" data-linenumber="1450" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1450
</td>
<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC1450" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="1451" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1451
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<td class="diff-line-num new_line old" data-linenumber="1451" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC1451" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">dnaclust</span></span>
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<td class="diff-line-num new new_line" data-linenumber="1451" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1451
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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC1451" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">dnaclust</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1452" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1452
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<td class="diff-line-num new_line" data-linenumber="1452" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1452
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<pre style="margin: 0;"> <span id="LC1452" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="1453" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1453
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<td class="diff-line-num new_line old" data-linenumber="1453" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC1453" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">cran</span><span class="p">-</span><span class="n" style="color: #333;">tcr</span><span class="p">,</span> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">cran</span><span class="p">-</span><span class="n" style="color: #333;">tigger</span><span class="p">,</span> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">cran</span><span class="p">-</span><span class="n" style="color: #333;">alakazam</span><span class="p">,</span> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">cran</span><span class="p">-</span><span class="n" style="color: #333;">shazam</span><span class="p">,</span> <span class="n" style="color: #333;">igor</span><span class="p">,</span> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">cran</span><span class="p">-</span><span class="n" style="color: #333;">sdmtools</span><span class="p">,</span> <span class="n" style="color: #333;">presto</span><span class="p">,</span> <span class="n" style="color: #333;">changeo</span></span>
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<td class="diff-line-num new old_line" data-linenumber="1454" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="1453" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1453
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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC1453" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">cran</span><span class="p">-</span><span class="n" style="color: #333;">tcr</span><span class="p">,</span> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">cran</span><span class="p">-</span><span class="n" style="color: #333;">tigger</span><span class="p">,</span> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">cran</span><span class="p">-</span><span class="n" style="color: #333;">alakazam</span><span class="p">,</span> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">cran</span><span class="p">-</span><span class="n" style="color: #333;">shazam</span><span class="p">,</span> <span class="n" style="color: #333;">igor</span><span class="p">,</span> <span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">cran</span><span class="p">-</span><span class="n" style="color: #333;">sdmtools</span><span class="p">,</span> <span class="n" style="color: #333;">presto</span><span class="p">,</span> <span class="n" style="color: #333;">changeo</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1454" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1454
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<td class="diff-line-num new_line" data-linenumber="1454" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1454
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<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC1454" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="1455" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1455
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<td class="diff-line-num new_line old" data-linenumber="1455" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC1455" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">ncbi</span><span class="p">-</span><span class="n" style="color: #333;">igblast</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="1456" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="1455" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1455
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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC1455" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">ncbi</span><span class="p">-</span><span class="n" style="color: #333;">igblast</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1456" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1456
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<td class="diff-line-num new_line" data-linenumber="1456" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1456
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<pre style="margin: 0;"> <span id="LC1456" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1457" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1457
</td>
<td class="diff-line-num new_line" data-linenumber="1457" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1457
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<pre style="margin: 0;"> <span id="LC1457" class="line" lang="mosel"><span class="n" style="color: #333;">Suggests</span><span class="p">:</span> <span class="n" style="color: #333;">python3</span><span class="p">-</span><span class="n" style="color: #333;">pyflow</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1458" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1458
</td>
<td class="diff-line-num new_line" data-linenumber="1458" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1458
</td>
<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC1458" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="1459" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1459
</td>
<td class="diff-line-num new_line old" data-linenumber="1459" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC1459" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">pigx</span><span class="p">-</span><span class="n" style="color: #333;">rnaseq</span><span class="p">,</span> <span class="n" style="color: #333;">pigx</span><span class="p">-</span><span class="n" style="color: #333;">scrnaseq</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="1460" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
</td>
<td class="diff-line-num new new_line" data-linenumber="1459" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1459
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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC1459" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">pigx</span><span class="p">-</span><span class="n" style="color: #333;">rnaseq</span><span class="p">,</span> <span class="n" style="color: #333;">pigx</span><span class="p">-</span><span class="n" style="color: #333;">scrnaseq</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1460" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1460
</td>
<td class="diff-line-num new_line" data-linenumber="1460" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1460
</td>
<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC1460" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1461" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1461
</td>
<td class="diff-line-num new_line" data-linenumber="1461" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1461
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<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC1461" class="line" lang="mosel"><span class="n" style="color: #333;">X</span><span class="p">-</span><span class="n" style="color: #333;">Mark</span><span class="p">:</span> <span class="n" style="color: #333;">The</span> <span class="n" style="color: #333;">information</span> <span class="n" style="color: #333;">below</span> <span class="n" style="color: #333;">needs</span> <span class="k" style="font-weight: 600;">to</span> <span class="n" style="color: #333;">be</span> <span class="n" style="color: #333;">checked</span> <span class="n" style="color: #333;">whether</span> <span class="n" style="color: #333;">it</span> <span class="n" style="color: #333;">can</span> <span class="n" style="color: #333;">be</span> <span class="n" style="color: #333;">obtained</span> <span class="k" style="font-weight: 600;">from</span> <span class="n" style="color: #333;">Vcs</span> <span class="k" style="font-weight: 600;">or</span> <span class="n" style="color: #333;">needs</span> <span class="k" style="font-weight: 600;">to</span> <span class="n" style="color: #333;">stay</span> <span class="n" style="color: #333;">here</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1462" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1462
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<td class="diff-line-num new_line" data-linenumber="1462" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1462
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<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC1462" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="1463" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1463
</td>
<td class="diff-line-num new_line old" data-linenumber="1463" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC1463" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">copycat</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="1464" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
</td>
<td class="diff-line-num new new_line" data-linenumber="1463" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1463
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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC1463" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">copycat</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1464" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1464
</td>
<td class="diff-line-num new_line" data-linenumber="1464" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1464
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<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC1464" class="line" lang="mosel"><span class="n" style="color: #333;">Homepage</span><span class="p">:</span> <span class="n" style="color: #333;">http</span><span class="p">://</span><span class="n" style="color: #333;">www</span><span class="p">-</span><span class="n" style="color: #333;">ab</span><span class="p">.</span><span class="n" style="color: #333;">informatik</span><span class="p">.</span><span class="n" style="color: #333;">uni</span><span class="p">-</span><span class="n" style="color: #333;">tuebingen</span><span class="p">.</span><span class="n" style="color: #333;">de</span><span class="p">/</span><span class="n" style="color: #333;">software</span><span class="p">/</span><span class="n" style="color: #333;">copycat</span><span class="p">/</span><span class="n" style="color: #333;">welcome</span><span class="p">.</span><span class="n" style="color: #333;">html</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1465" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1465
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<td class="diff-line-num new_line" data-linenumber="1465" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1465
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<pre style="margin: 0;"> <span id="LC1465" class="line" lang="mosel"><span class="n" style="color: #333;">License</span><span class="p">:</span> <span class="n" style="color: #333;">Use</span> <span class="k" style="font-weight: 600;">of</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">program</span> <span class="n" style="color: #333;">is</span> <span class="n" style="color: #333;">free</span> <span class="n" style="color: #333;">for</span> <span class="n" style="color: #333;">academic</span> <span class="n" style="color: #333;">purposes</span> <span class="n" style="color: #333;">at</span> <span class="n" style="color: #333;">an</span> <span class="n" style="color: #333;">academic</span> <span class="n" style="color: #333;">institute</span><span class="p">.</span> <span class="n" style="color: #333;">For</span> <span class="n" style="color: #333;">all</span> <span class="n" style="color: #333;">other</span> <span class="k" style="font-weight: 600;">uses</span><span class="p">,</span> <span class="n" style="color: #333;">please</span> <span class="n" style="color: #333;">contact</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">authors</span><span class="p">.</span></span>
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1466
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1466
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<pre style="margin: 0;"> <span id="LC1466" class="line" lang="mosel"><span class="n" style="color: #333;">Pkg</span><span class="p">-</span><span class="n" style="color: #333;">Description</span><span class="p">:</span> <span class="n" style="color: #333;">fast</span> <span class="n" style="color: #333;">access</span> <span class="k" style="font-weight: 600;">to</span> <span class="n" style="color: #333;">cophylogenetic</span> <span class="n" style="color: #333;">analyses</span></span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="1471" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="1471" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -1471,7 +1471,7 @@ Pkg-Description: fast access to cophylogenetic analyses</td>
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<td class="diff-line-num old_line" data-linenumber="1471" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1471
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<td class="diff-line-num new_line" data-linenumber="1471" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1471
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<pre style="margin: 0;"> <span id="LC1471" class="line" lang="mosel"> <span class="n" style="color: #333;">creation</span> <span class="k" style="font-weight: 600;">of</span> <span class="n" style="color: #333;">customized</span> <span class="n" style="color: #333;">host</span><span class="p">-</span><span class="n" style="color: #333;">parasite</span> <span class="n" style="color: #333;">association</span> <span class="n" style="color: #333;">data</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">the</span></span>
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<td class="diff-line-num old_line" data-linenumber="1472" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1472
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<td class="diff-line-num new_line" data-linenumber="1472" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1472
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<pre style="margin: 0;"> <span id="LC1472" class="line" lang="mosel"> <span class="n" style="color: #333;">computation</span> <span class="k" style="font-weight: 600;">of</span> <span class="n" style="color: #333;">phylogenetic</span> <span class="n" style="color: #333;">host</span><span class="p">/</span><span class="n" style="color: #333;">parasite</span> <span class="n" style="color: #333;">trees</span> <span class="n" style="color: #333;">based</span> <span class="n" style="color: #333;">on</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">NCBI</span> <span class="n" style="color: #333;">taxonomy</span><span class="p">.</span></span>
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<td class="diff-line-num old_line" data-linenumber="1473" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1473
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<td class="diff-line-num new_line" data-linenumber="1473" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1473
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<pre style="margin: 0;"> <span id="LC1473" class="line" lang="mosel"></span>
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<td class="diff-line-num old old_line" data-linenumber="1474" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1474
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<td class="diff-line-num new_line old" data-linenumber="1474" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC1474" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">btk</span><span class="p">-</span><span class="n" style="color: #333;">core</span></span>
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<td class="diff-line-num new old_line" data-linenumber="1475" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="1474" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1474
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<pre style="margin: 0;">+<span id="LC1474" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">btk</span><span class="p">-</span><span class="n" style="color: #333;">core</span></span>
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1475
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<td class="diff-line-num new_line" data-linenumber="1475" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1475
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<pre style="margin: 0;"> <span id="LC1475" class="line" lang="mosel"><span class="n" style="color: #333;">Homepage</span><span class="p">:</span> <span class="n" style="color: #333;">http</span><span class="p">://</span><span class="n" style="color: #333;">sourceforge</span><span class="p">.</span><span class="n" style="color: #333;">net</span><span class="p">/</span><span class="n" style="color: #333;">projects</span><span class="p">/</span><span class="n" style="color: #333;">btk</span><span class="p">/</span></span>
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<td class="diff-line-num old_line" data-linenumber="1476" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1476
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<td class="diff-line-num new_line" data-linenumber="1476" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1476
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<pre style="margin: 0;"> <span id="LC1476" class="line" lang="mosel"><span class="n" style="color: #333;">Responsible</span><span class="p">:</span> <span class="n" style="color: #333;">Morten</span> <span class="n" style="color: #333;">Kjeldgaard</span> <span class="p"><</span><span class="n" style="color: #333;">mok</span><span class="p">@</span><span class="n" style="color: #333;">bioxray</span><span class="p">.</span><span class="n" style="color: #333;">au</span><span class="p">.</span><span class="n" style="color: #333;">dk</span><span class="p">></span></span>
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<td class="diff-line-num old_line" data-linenumber="1477" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1477
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<td class="diff-line-num new_line" data-linenumber="1477" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1477
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<pre style="margin: 0;"> <span id="LC1477" class="line" lang="mosel"><span class="n" style="color: #333;">License</span><span class="p">:</span> <span class="n" style="color: #333;">GPL</span></span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="1482" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="1482" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -1482,7 +1482,7 @@ Pkg-Description: biomolecule Toolkit C++ library</td>
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1482
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1482
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<pre style="margin: 0;"> <span id="LC1482" class="line" lang="mosel"> <span class="n" style="color: #333;">for</span> <span class="n" style="color: #333;">common</span> <span class="n" style="color: #333;">tasks</span> <span class="k" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">structural</span> <span class="n" style="color: #333;">biology</span> <span class="k" style="font-weight: 600;">to</span> <span class="n" style="color: #333;">facilitate</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">development</span> <span class="k" style="font-weight: 600;">of</span></span>
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<td class="diff-line-num old_line" data-linenumber="1483" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1483
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<td class="diff-line-num new_line" data-linenumber="1483" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1483
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<pre style="margin: 0;"> <span id="LC1483" class="line" lang="mosel"> <span class="n" style="color: #333;">molecular</span> <span class="n" style="color: #333;">modeling</span><span class="p">,</span> <span class="n" style="color: #333;">design</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">analysis</span> <span class="n" style="color: #333;">tools</span><span class="p">.</span></span>
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<td class="diff-line-num old_line" data-linenumber="1484" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1484
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<td class="diff-line-num new_line" data-linenumber="1484" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1484
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<pre style="margin: 0;"> <span id="LC1484" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="1485" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1485
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<td class="diff-line-num new_line old" data-linenumber="1485" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC1485" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">asap</span></span>
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<td class="diff-line-num new old_line" data-linenumber="1486" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="1485" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1485
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<pre style="margin: 0;">+<span id="LC1485" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">asap</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1486" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1486
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<td class="diff-line-num new_line" data-linenumber="1486" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1486
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<pre style="margin: 0;"> <span id="LC1486" class="line" lang="mosel"><span class="n" style="color: #333;">Homepage</span><span class="p">:</span> <span class="n" style="color: #333;">http</span><span class="p">://</span><span class="n" style="color: #333;">asap</span><span class="p">.</span><span class="n" style="color: #333;">ahabs</span><span class="p">.</span><span class="n" style="color: #333;">wisc</span><span class="p">.</span><span class="n" style="color: #333;">edu</span><span class="p">/</span><span class="n" style="color: #333;">software</span><span class="p">/</span><span class="n" style="color: #333;">asap</span><span class="p">/</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1487" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1487
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<td class="diff-line-num new_line" data-linenumber="1487" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1487
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<pre style="margin: 0;"> <span id="LC1487" class="line" lang="mosel"><span class="n" style="color: #333;">Responsible</span><span class="p">:</span> <span class="n" style="color: #333;">Andreas</span> <span class="n" style="color: #333;">Tille</span> <span class="p"><</span><span class="n" style="color: #333;">tille</span><span class="p">@</span><span class="n" style="color: #333;">debian</span><span class="p">.</span><span class="n" style="color: #333;">org</span><span class="p">></span></span>
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<td class="diff-line-num old_line" data-linenumber="1488" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1488
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<td class="diff-line-num new_line" data-linenumber="1488" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1488
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<pre style="margin: 0;"> <span id="LC1488" class="line" lang="mosel"><span class="n" style="color: #333;">License</span><span class="p">:</span> <span class="n" style="color: #333;">GPL</span></span>
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<td class="diff-line-num unfold js-unfold new_line" data-linenumber="1510" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -1510,7 +1510,7 @@ Pkg-Description: organize the data associated with a genome</td>
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1510
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1510
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<pre style="margin: 0;"> <span id="LC1510" class="line" lang="mosel"> <span class="k" style="font-weight: 600;">inter</span><span class="p">-</span><span class="n" style="color: #333;">operable</span> <span class="n" style="color: #333;">between</span> <span class="n" style="color: #333;">sites</span><span class="p">.</span></span>
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1511
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1511
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<pre style="margin: 0;"> <span id="LC1511" class="line" lang="mosel"><span class="n" style="color: #333;">X</span><span class="p">-</span><span class="n" style="color: #333;">Category</span><span class="p">:</span> <span class="n" style="color: #333;">Annotation</span></span>
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1512
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1512
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<pre style="margin: 0;"> <span id="LC1512" class="line" lang="mosel"></span>
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1513
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<td class="diff-line-num new_line old" data-linenumber="1513" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC1513" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">cactus</span></span>
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<td class="diff-line-num new old_line" data-linenumber="1514" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="1513" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1513
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<pre style="margin: 0;">+<span id="LC1513" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">cactus</span></span>
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1514
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1514
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<pre style="margin: 0;"> <span id="LC1514" class="line" lang="mosel"><span class="n" style="color: #333;">Homepage</span><span class="p">:</span> <span class="n" style="color: #333;">http</span><span class="p">://</span><span class="n" style="color: #333;">www</span><span class="p">.</span><span class="n" style="color: #333;">cactuscode</span><span class="p">.</span><span class="n" style="color: #333;">org</span><span class="p">/</span><span class="n" style="color: #333;">Community</span><span class="p">/</span><span class="n" style="color: #333;">Biology</span><span class="p">.</span><span class="n" style="color: #333;">html</span></span>
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1515
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<td class="diff-line-num new_line" data-linenumber="1515" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1515
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<pre style="margin: 0;"> <span id="LC1515" class="line" lang="mosel"><span class="n" style="color: #333;">License</span><span class="p">:</span> <span class="n" style="color: #333;">GPL</span></span>
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<td class="diff-line-num old_line" data-linenumber="1516" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1516
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1516
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<pre style="margin: 0;"> <span id="LC1516" class="line" lang="mosel"><span class="n" style="color: #333;">Pkg</span><span class="p">-</span><span class="n" style="color: #333;">Description</span><span class="p">:</span></span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="1524" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="1524" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -1524,7 +1524,7 @@ Pkg-Description:</td>
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1524
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1524
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<pre style="margin: 0;"> <span id="LC1524" class="line" lang="mosel"> <span class="n" style="color: #333;">Metacomputing</span> <span class="n" style="color: #333;">Toolkit</span><span class="p">,</span> <span class="n" style="color: #333;">HDF5</span> <span class="n" style="color: #333;">parallel</span> <span class="n" style="color: #333;">file</span> <span class="n" style="color: #333;">I</span><span class="p">/</span><span class="n" style="color: #333;">O</span><span class="p">,</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">PETSc</span> <span class="n" style="color: #333;">scientific</span> <span class="n" style="color: #333;">library</span><span class="p">,</span></span>
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<td class="diff-line-num old_line" data-linenumber="1525" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1525
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<td class="diff-line-num new_line" data-linenumber="1525" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1525
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<pre style="margin: 0;"> <span id="LC1525" class="line" lang="mosel"> <span class="n" style="color: #333;">adaptive</span> <span class="n" style="color: #333;">mesh</span> <span class="n" style="color: #333;">refinement</span><span class="p">,</span> <span class="n" style="color: #333;">web</span> <span class="n" style="color: #333;">interfaces</span><span class="p">,</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">advanced</span> <span class="n" style="color: #333;">visualization</span> <span class="n" style="color: #333;">tools</span><span class="p">.</span></span>
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1526
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1526
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<pre style="margin: 0;"> <span id="LC1526" class="line" lang="mosel"></span>
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<td class="diff-line-num old old_line" data-linenumber="1527" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1527
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<td class="diff-line-num new_line old" data-linenumber="1527" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC1527" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">contralign</span></span>
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<td class="diff-line-num new old_line" data-linenumber="1528" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="1527" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1527
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<pre style="margin: 0;">+<span id="LC1527" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">contralign</span></span>
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1528
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<td class="diff-line-num new_line" data-linenumber="1528" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1528
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<pre style="margin: 0;"> <span id="LC1528" class="line" lang="mosel"><span class="n" style="color: #333;">Homepage</span><span class="p">:</span> <span class="n" style="color: #333;">http</span><span class="p">://</span><span class="n" style="color: #333;">contra</span><span class="p">.</span><span class="n" style="color: #333;">stanford</span><span class="p">.</span><span class="n" style="color: #333;">edu</span><span class="p">/</span><span class="n" style="color: #333;">contralign</span><span class="p">/</span></span>
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<td class="diff-line-num old_line" data-linenumber="1529" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1529
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1529
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<pre style="margin: 0;"> <span id="LC1529" class="line" lang="mosel"><span class="n" style="color: #333;">License</span><span class="p">:</span> <span class="k" style="font-weight: 600;">Public</span> <span class="n" style="color: #333;">Domain</span></span>
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1530
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1530
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<pre style="margin: 0;"> <span id="LC1530" class="line" lang="mosel"><span class="n" style="color: #333;">Pkg</span><span class="p">-</span><span class="n" style="color: #333;">Description</span><span class="p">:</span> <span class="n" style="color: #333;">parameter</span> <span class="n" style="color: #333;">learning</span> <span class="n" style="color: #333;">framework</span> <span class="n" style="color: #333;">for</span> <span class="n" style="color: #333;">protein</span> <span class="n" style="color: #333;">pairwise</span> <span class="n" style="color: #333;">sequence</span> <span class="n" style="color: #333;">alignment</span></span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="1535" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="1535" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -1535,13 +1535,13 @@ Pkg-Description: parameter learning framework for protein pairwise sequence alig</td>
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1535
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1535
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<pre style="margin: 0;"> <span id="LC1535" class="line" lang="mosel"> <span class="n" style="color: #333;">previously</span> <span class="n" style="color: #333;">unseen</span> <span class="n" style="color: #333;">sequences</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">avoid</span> <span class="n" style="color: #333;">overfitting</span> <span class="n" style="color: #333;">by</span> <span class="n" style="color: #333;">controlling</span> <span class="k" style="font-weight: 600;">model</span></span>
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<td class="diff-line-num old_line" data-linenumber="1536" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1536
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1536
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<pre style="margin: 0;"> <span id="LC1536" class="line" lang="mosel"> <span class="n" style="color: #333;">complexity</span> <span class="n" style="color: #333;">through</span> <span class="n" style="color: #333;">regularization</span><span class="p">.</span></span>
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1537
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1537
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<pre style="margin: 0;"> <span id="LC1537" class="line" lang="mosel"></span>
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1538
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<pre style="margin: 0;">-<span id="LC1538" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">concavity</span></span>
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1538
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<pre style="margin: 0;">+<span id="LC1538" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">concavity</span></span>
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1539
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1539
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<pre style="margin: 0;"> <span id="LC1539" class="line" lang="mosel"></span>
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1540
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<td class="diff-line-num new_line old" data-linenumber="1540" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC1540" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">conservation</span><span class="p">-</span><span class="n" style="color: #333;">code</span></span>
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1540
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<pre style="margin: 0;">+<span id="LC1540" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">conservation</span><span class="p">-</span><span class="n" style="color: #333;">code</span></span>
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1541
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1541
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<pre style="margin: 0;"> <span id="LC1541" class="line" lang="mosel"></span>
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1542
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<td class="diff-line-num new_line old" data-linenumber="1542" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC1542" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">galaxy</span></span>
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1542
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<pre style="margin: 0;">+<span id="LC1542" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">galaxy</span></span>
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1543
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1543
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<pre style="margin: 0;"> <span id="LC1543" class="line" lang="mosel"></span>
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1544
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<td class="diff-line-num new_line old" data-linenumber="1544" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC1544" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">genographer</span></span>
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1544
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<pre style="margin: 0;">+<span id="LC1544" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">genographer</span></span>
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1545
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1545
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<pre style="margin: 0;"> <span id="LC1545" class="line" lang="mosel"><span class="n" style="color: #333;">Homepage</span><span class="p">:</span> <span class="n" style="color: #333;">https</span><span class="p">://</span><span class="n" style="color: #333;">sourceforge</span><span class="p">.</span><span class="n" style="color: #333;">net</span><span class="p">/</span><span class="n" style="color: #333;">projects</span><span class="p">/</span><span class="n" style="color: #333;">genographer</span><span class="p">/</span></span>
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1546
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1546
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<pre style="margin: 0;"> <span id="LC1546" class="line" lang="mosel"><span class="n" style="color: #333;">License</span><span class="p">:</span> <span class="n" style="color: #333;">GPL</span></span>
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1547
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1547
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<pre style="margin: 0;"> <span id="LC1547" class="line" lang="mosel"><span class="n" style="color: #333;">Pkg</span><span class="p">-</span><span class="n" style="color: #333;">Description</span><span class="p">:</span> <span class="nb" style="color: #0086b3;">read</span> <span class="n" style="color: #333;">data</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">reconstruct</span> <span class="n" style="color: #333;">them</span> <span class="n" style="color: #333;">into</span> <span class="n" style="color: #333;">a</span> <span class="n" style="color: #333;">gel</span> <span class="n" style="color: #333;">image</span></span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="1553" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="1553" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -1553,7 +1553,7 @@ Pkg-Description: read data and reconstruct them into a gel image</td>
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1553
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1553
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<pre style="margin: 0;"> <span id="LC1553" class="line" lang="mosel"> <span class="n" style="color: #333;">The</span> <span class="n" style="color: #333;">program</span> <span class="n" style="color: #333;">is</span> <span class="n" style="color: #333;">written</span> <span class="k" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">Java</span> <span class="k" style="font-weight: 600;">and</span> <span class="k" style="font-weight: 600;">uses</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">Java</span> <span class="m" style="color: #099;">1.3</span> <span class="n" style="color: #333;">API</span><span class="p">.</span> <span class="n" style="color: #333;">Therefore</span><span class="p">,</span></span>
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1554
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1554
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<pre style="margin: 0;"> <span id="LC1554" class="line" lang="mosel"> <span class="n" style="color: #333;">it</span> <span class="n" style="color: #333;">should</span> <span class="nf" style="color: #900; font-weight: 600;">run</span> <span class="n" style="color: #333;">on</span> <span class="n" style="color: #333;">any</span> <span class="n" style="color: #333;">machine</span> <span class="n" style="color: #333;">that</span> <span class="n" style="color: #333;">can</span> <span class="nf" style="color: #900; font-weight: 600;">run</span> <span class="n" style="color: #333;">java</span><span class="p">.</span></span>
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1555
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1555
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<pre style="margin: 0;"> <span id="LC1555" class="line" lang="mosel"></span>
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1556
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<td class="diff-line-num new_line old" data-linenumber="1556" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC1556" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">phylographer</span></span>
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1556
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<pre style="margin: 0;">+<span id="LC1556" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">phylographer</span></span>
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1557
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1557
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<pre style="margin: 0;"> <span id="LC1557" class="line" lang="mosel"><span class="n" style="color: #333;">Homepage</span><span class="p">:</span> <span class="n" style="color: #333;">http</span><span class="p">://</span><span class="n" style="color: #333;">www</span><span class="p">.</span><span class="n" style="color: #333;">atgc</span><span class="p">.</span><span class="n" style="color: #333;">org</span><span class="p">/</span><span class="n" style="color: #333;">PhyloGrapher</span><span class="p">/</span><span class="n" style="color: #333;">PhyloGrapher_Welcome</span><span class="p">.</span><span class="n" style="color: #333;">html</span></span>
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1558
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1558
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<pre style="margin: 0;"> <span id="LC1558" class="line" lang="mosel"><span class="n" style="color: #333;">License</span><span class="p">:</span> <span class="n" style="color: #333;">GPL</span></span>
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1559
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1559
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<pre style="margin: 0;"> <span id="LC1559" class="line" lang="mosel"><span class="n" style="color: #333;">X</span><span class="p">-</span><span class="n" style="color: #333;">Category</span><span class="p">:</span> <span class="n" style="color: #333;">Graphical</span> <span class="n" style="color: #333;">representation</span> <span class="k" style="font-weight: 600;">of</span> <span class="n" style="color: #333;">sequence</span> <span class="n" style="color: #333;">conservation</span></span>
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<td class="diff-line-num unfold js-unfold new_line" data-linenumber="1574" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -1574,7 +1574,7 @@ Remark: Outdated upstream, better alternatives available</td>
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1574
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1574
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<pre style="margin: 0;"> <span id="LC1574" class="line" lang="mosel"><span class="s1" style="color: #d14;"> The former packaging effort of this package was dropped. It seems</span></span>
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1575
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1575
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<pre style="margin: 0;"> <span id="LC1575" class="line" lang="mosel"><span class="s1" style="color: #d14;"> that http://cytoscape.org/ is a reasonable replacement.</span></span>
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1576
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1576
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<pre style="margin: 0;"> <span id="LC1576" class="line" lang="mosel"></span>
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1577
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<pre style="margin: 0;">-<span id="LC1577" class="line" lang="mosel"><span class="s1" style="color: #d14;"><span class="idiff left right">Suggest</span>s: phylowin</span></span>
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<td class="diff-line-num new old_line" data-linenumber="1578" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="1577" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1577
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<pre style="margin: 0;">+<span id="LC1577" class="line" lang="mosel"><span class="s1" style="color: #d14;"><span class="idiff left right">Recommend</span>s: phylowin</span></span>
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1578
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1578
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<pre style="margin: 0;"> <span id="LC1578" class="line" lang="mosel"><span class="s1" style="color: #d14;">Homepage: http://pbil.univ-lyon1.fr/software/phylowin.html</span></span>
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1579
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1579
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<pre style="margin: 0;"> <span id="LC1579" class="line" lang="mosel"><span class="s1" style="color: #d14;">WNPP: 395840</span></span>
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1580
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1580
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<pre style="margin: 0;"> <span id="LC1580" class="line" lang="mosel"><span class="s1" style="color: #d14;">License: unknown</span></span>
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<td class="diff-line-num unfold js-unfold new_line" data-linenumber="1599" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -1599,14 +1599,14 @@ Remark: Issuer of previous ITP said:</td>
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1599
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1599
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<pre style="margin: 0;"> <span id="LC1599" class="line" lang="mosel"><span class="s1" style="color: #d14;"> Probably it makes sense to remove this project from the prospective packages</span></span>
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1600
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1600
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<pre style="margin: 0;"> <span id="LC1600" class="line" lang="mosel"><span class="s1" style="color: #d14;"> list.</span></span>
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1601
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1601
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<pre style="margin: 0;"> <span id="LC1601" class="line" lang="mosel"></span>
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1602
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<pre style="margin: 0;">-<span id="LC1602" class="line" lang="mosel"><span class="s1" style="color: #d14;"><span class="idiff left right">Suggest</span>s: phpphylotree</span></span>
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1602
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<pre style="margin: 0;">+<span id="LC1602" class="line" lang="mosel"><span class="s1" style="color: #d14;"><span class="idiff left right">Recommend</span>s: phpphylotree</span></span>
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1603
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1603
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<pre style="margin: 0;"> <span id="LC1603" class="line" lang="mosel"><span class="s1" style="color: #d14;">Homepage: http://www.bioinformatics.org/project/?group_id=372</span></span>
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1604
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1604
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<pre style="margin: 0;"> <span id="LC1604" class="line" lang="mosel"><span class="s1" style="color: #d14;">License: GPL</span></span>
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1605
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1605
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<pre style="margin: 0;"> <span id="LC1605" class="line" lang="mosel"><span class="s1" style="color: #d14;">Pkg-Description: draw phylogenetic trees</span></span>
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<td class="diff-line-num old_line" data-linenumber="1606" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1606
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1606
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<pre style="margin: 0;"> <span id="LC1606" class="line" lang="mosel"><span class="s1" style="color: #d14;"> PhpPhylotree is a web application that is able to draw phylogenetic trees.</span></span>
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1607
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1607
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<pre style="margin: 0;"> <span id="LC1607" class="line" lang="mosel"><span class="s1" style="color: #d14;"> It produces an SVG (Scalable Vector Graphic) file from phylip/newick tree files.</span></span>
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1608
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1608
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<pre style="margin: 0;"> <span id="LC1608" class="line" lang="mosel"></span>
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1609
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<pre style="margin: 0;">-<span id="LC1609" class="line" lang="mosel"><span class="s1" style="color: #d14;"><span class="idiff left right">Suggest</span>s: twain</span></span>
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1609
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<pre style="margin: 0;">+<span id="LC1609" class="line" lang="mosel"><span class="s1" style="color: #d14;"><span class="idiff left right">Recommend</span>s: twain</span></span>
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<td class="diff-line-num old_line" data-linenumber="1610" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1610
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1610
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<pre style="margin: 0;"> <span id="LC1610" class="line" lang="mosel"><span class="s1" style="color: #d14;">Homepage: http://cbcb.umd.edu/software/pirate/twain/twain.shtml</span></span>
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<td class="diff-line-num old_line" data-linenumber="1611" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1611
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<td class="diff-line-num new_line" data-linenumber="1611" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1611
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<pre style="margin: 0;"> <span id="LC1611" class="line" lang="mosel"><span class="s1" style="color: #d14;">License: Open Source</span></span>
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<td class="diff-line-num old_line" data-linenumber="1612" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1612
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<td class="diff-line-num new_line" data-linenumber="1612" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1612
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<pre style="margin: 0;"> <span id="LC1612" class="line" lang="mosel"><span class="s1" style="color: #d14;">Pkg-Description: syntenic genefinder employing a Generalized Pair Hidden Markov Model</span></span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="1629" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="1629" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -1629,7 +1629,7 @@ Pkg-Description: syntenic genefinder employing a Generalized Pair Hidden Markov</td>
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<td class="diff-line-num old_line" data-linenumber="1629" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1629
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<td class="diff-line-num new_line" data-linenumber="1629" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1629
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<pre style="margin: 0;"> <span id="LC1629" class="line" lang="mosel"><span class="s1" style="color: #d14;"> Slides from a talk at Computational Genomics 2004 are now available.</span></span>
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<td class="diff-line-num old_line" data-linenumber="1630" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1630
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<td class="diff-line-num new_line" data-linenumber="1630" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1630
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<pre style="margin: 0;"> <span id="LC1630" class="line" lang="mosel"><span class="s1" style="color: #d14;">Remark: Computational Gene Finding (http://www.cbcb.umd.edu/software/)</span></span>
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<td class="diff-line-num old_line" data-linenumber="1631" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1631
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<td class="diff-line-num new_line" data-linenumber="1631" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1631
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<pre style="margin: 0;"> <span id="LC1631" class="line" lang="mosel"></span>
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<td class="diff-line-num old old_line" data-linenumber="1632" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1632
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<td class="diff-line-num new_line old" data-linenumber="1632" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC1632" class="line" lang="mosel"><span class="s1" style="color: #d14;"><span class="idiff left right">Suggest</span>s: rose</span></span>
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<td class="diff-line-num new old_line" data-linenumber="1633" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="1632" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1632
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<pre style="margin: 0;">+<span id="LC1632" class="line" lang="mosel"><span class="s1" style="color: #d14;"><span class="idiff left right">Recommend</span>s: rose</span></span>
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<td class="diff-line-num old_line" data-linenumber="1633" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1633
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<td class="diff-line-num new_line" data-linenumber="1633" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1633
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<pre style="margin: 0;"> <span id="LC1633" class="line" lang="mosel"><span class="s1" style="color: #d14;">Homepage: http://www.cbcb.umd.edu/software/rose/Rose.html</span></span>
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<td class="diff-line-num old_line" data-linenumber="1634" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1634
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<td class="diff-line-num new_line" data-linenumber="1634" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1634
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<pre style="margin: 0;"> <span id="LC1634" class="line" lang="mosel"><span class="s1" style="color: #d14;">License: Open Source</span></span>
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<td class="diff-line-num old_line" data-linenumber="1635" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1635
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1635
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<pre style="margin: 0;"> <span id="LC1635" class="line" lang="mosel"><span class="s1" style="color: #d14;">Pkg-Description: Region-Of-Synteny Extractor</span></span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="1648" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="1648" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -1648,7 +1648,7 @@ Pkg-Description: Region-Of-Synteny Extractor</td>
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1648
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<td class="diff-line-num new_line" data-linenumber="1648" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1648
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<pre style="margin: 0;"> <span id="LC1648" class="line" lang="mosel"><span class="s1" style="color: #d14;"> boundaries of the output region.</span></span>
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<td class="diff-line-num old_line" data-linenumber="1649" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1649
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<td class="diff-line-num new_line" data-linenumber="1649" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1649
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<pre style="margin: 0;"> <span id="LC1649" class="line" lang="mosel"><span class="s1" style="color: #d14;">Remark: Computational Gene Finding (http://www.cbcb.umd.edu/software/)</span></span>
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<td class="diff-line-num old_line" data-linenumber="1650" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1650
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1650
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<pre style="margin: 0;"> <span id="LC1650" class="line" lang="mosel"></span>
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<td class="diff-line-num old old_line" data-linenumber="1651" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1651
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<td class="diff-line-num new_line old" data-linenumber="1651" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC1651" class="line" lang="mosel"><span class="s1" style="color: #d14;"><span class="idiff left right">Suggest</span>s: glimmerhmm</span></span>
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<td class="diff-line-num new old_line" data-linenumber="1652" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="1651" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1651
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<pre style="margin: 0;">+<span id="LC1651" class="line" lang="mosel"><span class="s1" style="color: #d14;"><span class="idiff left right">Recommend</span>s: glimmerhmm</span></span>
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<td class="diff-line-num old_line" data-linenumber="1652" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1652
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<td class="diff-line-num new_line" data-linenumber="1652" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1652
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<pre style="margin: 0;"> <span id="LC1652" class="line" lang="mosel"><span class="s1" style="color: #d14;">Homepage: http://www.cbcb.umd.edu/software/glimmerhmm/</span></span>
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<td class="diff-line-num old_line" data-linenumber="1653" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1653
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<td class="diff-line-num new_line" data-linenumber="1653" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1653
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<pre style="margin: 0;"> <span id="LC1653" class="line" lang="mosel"><span class="s1" style="color: #d14;">License: Artistic</span></span>
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<td class="diff-line-num old_line" data-linenumber="1654" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1654
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<td class="diff-line-num new_line" data-linenumber="1654" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1654
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<pre style="margin: 0;"> <span id="LC1654" class="line" lang="mosel"><span class="s1" style="color: #d14;">Pkg-Description: Eukaryotic Gene-Finding System</span></span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="1663" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="1663" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -1663,7 +1663,7 @@ Pkg-Description: Eukaryotic Gene-Finding System</td>
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1663
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1663
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<pre style="margin: 0;"> <span id="LC1663" class="line" lang="mosel"> <span class="n" style="color: #333;">user</span> <span class="n" style="color: #333;">manual</span> <span class="n" style="color: #333;">can</span> <span class="n" style="color: #333;">be</span> <span class="n" style="color: #333;">consulted</span> <span class="n" style="color: #333;">here</span><span class="p">.</span></span>
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1664
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1664
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<pre style="margin: 0;"> <span id="LC1664" class="line" lang="mosel"><span class="n" style="color: #333;">Remark</span><span class="p">:</span> <span class="n" style="color: #333;">Computational</span> <span class="n" style="color: #333;">Gene</span> <span class="n" style="color: #333;">Finding</span> <span class="p">(</span><span class="n" style="color: #333;">http</span><span class="p">://</span><span class="n" style="color: #333;">www</span><span class="p">.</span><span class="n" style="color: #333;">cbcb</span><span class="p">.</span><span class="n" style="color: #333;">umd</span><span class="p">.</span><span class="n" style="color: #333;">edu</span><span class="p">/</span><span class="n" style="color: #333;">software</span><span class="p">/)</span></span>
</pre>
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1665
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1665
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<pre style="margin: 0;"> <span id="LC1665" class="line" lang="mosel"></span>
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1666
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<td class="diff-line-num new_line old" data-linenumber="1666" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC1666" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">genezilla</span></span>
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<td class="diff-line-num new new_line" data-linenumber="1666" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1666
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<pre style="margin: 0;">+<span id="LC1666" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">genezilla</span></span>
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1667
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1667
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<pre style="margin: 0;"> <span id="LC1667" class="line" lang="mosel"><span class="n" style="color: #333;">Homepage</span><span class="p">:</span> <span class="n" style="color: #333;">http</span><span class="p">://</span><span class="n" style="color: #333;">www</span><span class="p">.</span><span class="n" style="color: #333;">genezilla</span><span class="p">.</span><span class="n" style="color: #333;">org</span><span class="p">/</span></span>
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<td class="diff-line-num old_line" data-linenumber="1668" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1668
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<td class="diff-line-num new_line" data-linenumber="1668" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1668
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<pre style="margin: 0;"> <span id="LC1668" class="line" lang="mosel"><span class="n" style="color: #333;">License</span><span class="p">:</span> <span class="n" style="color: #333;">Artistic</span></span>
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<td class="diff-line-num old_line" data-linenumber="1669" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1669
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<td class="diff-line-num new_line" data-linenumber="1669" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1669
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<pre style="margin: 0;"> <span id="LC1669" class="line" lang="mosel"><span class="n" style="color: #333;">Language</span><span class="p">:</span> <span class="n" style="color: #333;">C</span><span class="p">++</span></span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="1693" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="1693" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -1693,7 +1693,7 @@ Pkg-Description: eukaryotic gene finder</td>
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1693
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<td class="diff-line-num new_line" data-linenumber="1693" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1693
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<pre style="margin: 0;"> <span id="LC1693" class="line" lang="mosel"><span class="s1" style="color: #d14;"> for the comparative gene finder TWAIN.</span></span>
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<td class="diff-line-num old_line" data-linenumber="1694" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1694
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1694
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<pre style="margin: 0;"> <span id="LC1694" class="line" lang="mosel"><span class="s1" style="color: #d14;">Remark: Computational Gene Finding (http://www.cbcb.umd.edu/software/)</span></span>
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1695
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1695
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<pre style="margin: 0;"> <span id="LC1695" class="line" lang="mosel"></span>
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1696
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<td class="diff-line-num new_line old" data-linenumber="1696" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC1696" class="line" lang="mosel"><span class="s1" style="color: #d14;"><span class="idiff left right">Suggest</span>s: exalt</span></span>
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<td class="diff-line-num new old_line" data-linenumber="1697" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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1696
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<pre style="margin: 0;">+<span id="LC1696" class="line" lang="mosel"><span class="s1" style="color: #d14;"><span class="idiff left right">Recommend</span>s: exalt</span></span>
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<td class="diff-line-num old_line" data-linenumber="1697" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1697
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<td class="diff-line-num new_line" data-linenumber="1697" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1697
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<pre style="margin: 0;"> <span id="LC1697" class="line" lang="mosel"><span class="s1" style="color: #d14;">Homepage: http://www.cbcb.umd.edu/software/exalt/</span></span>
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1698
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1698
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<pre style="margin: 0;"> <span id="LC1698" class="line" lang="mosel"><span class="s1" style="color: #d14;">License: Artistic</span></span>
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<td class="diff-line-num old_line" data-linenumber="1699" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1699
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1699
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<pre style="margin: 0;"> <span id="LC1699" class="line" lang="mosel"><span class="s1" style="color: #d14;">Pkg-Description: phylogenetic generalized hidden Markov model for predicting alternatively spliced exons</span></span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="1707" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="1707" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -1707,7 +1707,7 @@ Pkg-Description: phylogenetic generalized hidden Markov model for predicting alt</td>
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1707
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1707
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<pre style="margin: 0;"> <span id="LC1707" class="line" lang="mosel"> <span class="nf" style="color: #900; font-weight: 600;">run</span> <span class="n" style="color: #333;">on</span> <span class="n" style="color: #333;">other</span> <span class="n" style="color: #333;">species</span><span class="p">.</span></span>
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<td class="diff-line-num old_line" data-linenumber="1708" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1708
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1708
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<pre style="margin: 0;"> <span id="LC1708" class="line" lang="mosel"><span class="n" style="color: #333;">Remark</span><span class="p">:</span> <span class="n" style="color: #333;">Computational</span> <span class="n" style="color: #333;">Gene</span> <span class="n" style="color: #333;">Finding</span> <span class="p">(</span><span class="n" style="color: #333;">http</span><span class="p">://</span><span class="n" style="color: #333;">www</span><span class="p">.</span><span class="n" style="color: #333;">cbcb</span><span class="p">.</span><span class="n" style="color: #333;">umd</span><span class="p">.</span><span class="n" style="color: #333;">edu</span><span class="p">/</span><span class="n" style="color: #333;">software</span><span class="p">/)</span></span>
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<td class="diff-line-num old_line" data-linenumber="1709" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1709
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1709
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<pre style="margin: 0;"> <span id="LC1709" class="line" lang="mosel"></span>
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<td class="diff-line-num old old_line" data-linenumber="1710" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1710
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<td class="diff-line-num new_line old" data-linenumber="1710" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC1710" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">jigsaw</span></span>
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<td class="diff-line-num new old_line" data-linenumber="1711" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="1710" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1710
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<pre style="margin: 0;">+<span id="LC1710" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">jigsaw</span></span>
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1711
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1711
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<pre style="margin: 0;"> <span id="LC1711" class="line" lang="mosel"><span class="n" style="color: #333;">Homepage</span><span class="p">:</span> <span class="n" style="color: #333;">http</span><span class="p">://</span><span class="n" style="color: #333;">www</span><span class="p">.</span><span class="n" style="color: #333;">cbcb</span><span class="p">.</span><span class="n" style="color: #333;">umd</span><span class="p">.</span><span class="n" style="color: #333;">edu</span><span class="p">/</span><span class="n" style="color: #333;">software</span><span class="p">/</span><span class="n" style="color: #333;">jigsaw</span><span class="p">/</span></span>
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1712
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1712
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<pre style="margin: 0;"> <span id="LC1712" class="line" lang="mosel"><span class="n" style="color: #333;">License</span><span class="p">:</span> <span class="n" style="color: #333;">Artistic</span></span>
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1713
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1713
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<pre style="margin: 0;"> <span id="LC1713" class="line" lang="mosel"><span class="n" style="color: #333;">Pkg</span><span class="p">-</span><span class="n" style="color: #333;">Description</span><span class="p">:</span> <span class="n" style="color: #333;">gene</span> <span class="n" style="color: #333;">prediction</span> <span class="n" style="color: #333;">using</span> <span class="n" style="color: #333;">multiple</span> <span class="n" style="color: #333;">sources</span> <span class="k" style="font-weight: 600;">of</span> <span class="n" style="color: #333;">evidence</span></span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="1735" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="1735" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -1735,7 +1735,7 @@ Pkg-Description: gene prediction using multiple sources of evidence</td>
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1735
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<td class="diff-line-num new_line" data-linenumber="1735" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1735
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<pre style="margin: 0;"> <span id="LC1735" class="line" lang="mosel"> <span class="n" style="color: #333;">custom</span> <span class="n" style="color: #333;">tracks</span> <span class="k" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">UCSC</span> <span class="n" style="color: #333;">Human</span> <span class="n" style="color: #333;">Genome</span> <span class="n" style="color: #333;">Browser</span></span>
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<td class="diff-line-num old_line" data-linenumber="1736" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1736
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1736
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<pre style="margin: 0;"> <span id="LC1736" class="line" lang="mosel"><span class="n" style="color: #333;">Remark</span><span class="p">:</span> <span class="n" style="color: #333;">Computational</span> <span class="n" style="color: #333;">Gene</span> <span class="n" style="color: #333;">Finding</span> <span class="p">(</span><span class="n" style="color: #333;">http</span><span class="p">://</span><span class="n" style="color: #333;">www</span><span class="p">.</span><span class="n" style="color: #333;">cbcb</span><span class="p">.</span><span class="n" style="color: #333;">umd</span><span class="p">.</span><span class="n" style="color: #333;">edu</span><span class="p">/</span><span class="n" style="color: #333;">software</span><span class="p">/)</span></span>
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1737
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1737
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<pre style="margin: 0;"> <span id="LC1737" class="line" lang="mosel"></span>
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1738
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<td class="diff-line-num new_line old" data-linenumber="1738" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC1738" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">genesplicer</span></span>
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1738
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<pre style="margin: 0;">+<span id="LC1738" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">genesplicer</span></span>
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1739
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1739
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<pre style="margin: 0;"> <span id="LC1739" class="line" lang="mosel"><span class="n" style="color: #333;">Homepage</span><span class="p">:</span> <span class="n" style="color: #333;">http</span><span class="p">://</span><span class="n" style="color: #333;">www</span><span class="p">.</span><span class="n" style="color: #333;">cbcb</span><span class="p">.</span><span class="n" style="color: #333;">umd</span><span class="p">.</span><span class="n" style="color: #333;">edu</span><span class="p">/</span><span class="n" style="color: #333;">software</span><span class="p">/</span><span class="n" style="color: #333;">GeneSplicer</span><span class="p">/</span></span>
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1740
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1740
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<pre style="margin: 0;"> <span id="LC1740" class="line" lang="mosel"><span class="n" style="color: #333;">License</span><span class="p">:</span> <span class="n" style="color: #333;">Artistic</span></span>
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1741
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1741
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<pre style="margin: 0;"> <span id="LC1741" class="line" lang="mosel"><span class="n" style="color: #333;">Pkg</span><span class="p">-</span><span class="n" style="color: #333;">Description</span><span class="p">:</span> <span class="n" style="color: #333;">computational</span> <span class="n" style="color: #333;">method</span> <span class="n" style="color: #333;">for</span> <span class="n" style="color: #333;">splice</span> <span class="n" style="color: #333;">site</span> <span class="n" style="color: #333;">prediction</span></span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="1779" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="1779" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -1779,7 +1779,7 @@ Pkg-Description: motif discovery tool</td>
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1779
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1779
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<pre style="margin: 0;"> <span id="LC1779" class="line" lang="mosel"> <span class="n" style="color: #333;">On</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">other</span> <span class="n" style="color: #333;">hand</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">SMILE</span> <span class="n" style="color: #333;">author</span> <span class="n" style="color: #333;">told</span> <span class="n" style="color: #333;">us</span> <span class="k" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">private</span> <span class="n" style="color: #333;">mail</span> <span class="n" style="color: #333;">that</span> <span class="n" style="color: #333;">he</span></span>
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1780
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1780
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<pre style="margin: 0;"> <span id="LC1780" class="line" lang="mosel"> <span class="n" style="color: #333;">thinks</span> <span class="n" style="color: #333;">that</span> <span class="n" style="color: #333;">RISO</span> <span class="n" style="color: #333;">is</span> <span class="n" style="color: #333;">dead</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">SMILE</span> <span class="n" style="color: #333;">continues</span> <span class="k" style="font-weight: 600;">to</span> <span class="n" style="color: #333;">have</span> <span class="n" style="color: #333;">some</span> <span class="n" style="color: #333;">importance</span><span class="p">.</span></span>
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1781
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1781
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<pre style="margin: 0;"> <span id="LC1781" class="line" lang="mosel"></span>
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1782
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<td class="diff-line-num new_line old" data-linenumber="1782" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC1782" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">mummergpu</span></span>
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1782
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<pre style="margin: 0;">+<span id="LC1782" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">mummergpu</span></span>
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1783
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1783
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<pre style="margin: 0;"> <span id="LC1783" class="line" lang="mosel"><span class="n" style="color: #333;">Homepage</span><span class="p">:</span> <span class="n" style="color: #333;">http</span><span class="p">://</span><span class="n" style="color: #333;">mummergpu</span><span class="p">.</span><span class="n" style="color: #333;">sourceforge</span><span class="p">.</span><span class="n" style="color: #333;">net</span><span class="p">/</span></span>
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1784
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1784
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<pre style="margin: 0;"> <span id="LC1784" class="line" lang="mosel"><span class="n" style="color: #333;">License</span><span class="p">:</span> <span class="n" style="color: #333;">Artistic</span></span>
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1785
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1785
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<pre style="margin: 0;"> <span id="LC1785" class="line" lang="mosel"><span class="n" style="color: #333;">Pkg</span><span class="p">-</span><span class="n" style="color: #333;">Description</span><span class="p">:</span> <span class="n" style="color: #333;">High</span><span class="p">-</span><span class="n" style="color: #333;">throughput</span> <span class="n" style="color: #333;">sequence</span> <span class="n" style="color: #333;">alignment</span> <span class="n" style="color: #333;">using</span> <span class="n" style="color: #333;">Graphics</span> <span class="n" style="color: #333;">Processing</span> <span class="n" style="color: #333;">Units</span></span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -1807,7 +1807,7 @@ Pkg-Description: High-throughput sequence alignment using Graphics Processing Un</td>
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1807
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<pre style="margin: 0;"> <span id="LC1807" class="line" lang="mosel"> <span class="n" style="color: #333;">technologies</span><span class="p">.</span></span>
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1808
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1808
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<pre style="margin: 0;"> <span id="LC1808" class="line" lang="mosel"><span class="n" style="color: #333;">Remark</span><span class="p">:</span> <span class="n" style="color: #333;">Genome</span> <span class="n" style="color: #333;">assembly</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">large</span><span class="p">-</span><span class="n" style="color: #333;">scale</span> <span class="n" style="color: #333;">genome</span> <span class="n" style="color: #333;">alignment</span> <span class="p">(</span><span class="n" style="color: #333;">http</span><span class="p">://</span><span class="n" style="color: #333;">www</span><span class="p">.</span><span class="n" style="color: #333;">cbcb</span><span class="p">.</span><span class="n" style="color: #333;">umd</span><span class="p">.</span><span class="n" style="color: #333;">edu</span><span class="p">/</span><span class="n" style="color: #333;">software</span><span class="p">/)</span></span>
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1809
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1809
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<pre style="margin: 0;"> <span id="LC1809" class="line" lang="mosel"></span>
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1810
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<pre style="margin: 0;">-<span id="LC1810" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">amoscmp</span></span>
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1810
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<pre style="margin: 0;">+<span id="LC1810" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">amoscmp</span></span>
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1811
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1811
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<pre style="margin: 0;"> <span id="LC1811" class="line" lang="mosel"><span class="n" style="color: #333;">Homepage</span><span class="p">:</span> <span class="n" style="color: #333;">http</span><span class="p">://</span><span class="n" style="color: #333;">amos</span><span class="p">.</span><span class="n" style="color: #333;">sourceforge</span><span class="p">.</span><span class="n" style="color: #333;">net</span><span class="p">/</span><span class="n" style="color: #333;">docs</span><span class="p">/</span><span class="n" style="color: #333;">pipeline</span><span class="p">/</span><span class="n" style="color: #333;">AMOScmp</span><span class="p">.</span><span class="n" style="color: #333;">html</span></span>
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1812
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1812
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<pre style="margin: 0;"> <span id="LC1812" class="line" lang="mosel"><span class="n" style="color: #333;">License</span><span class="p">:</span> <span class="n" style="color: #333;">Artistic</span></span>
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1813
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1813
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<pre style="margin: 0;"> <span id="LC1813" class="line" lang="mosel"><span class="n" style="color: #333;">Pkg</span><span class="p">-</span><span class="n" style="color: #333;">Description</span><span class="p">:</span> <span class="n" style="color: #333;">comparative</span> <span class="n" style="color: #333;">genome</span> <span class="n" style="color: #333;">assembly</span> <span class="k" style="font-weight: 600;">package</span></span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="1836" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="1836" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -1836,7 +1836,7 @@ Pkg-Description: comparative genome assembly package</td>
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1836
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1836
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<pre style="margin: 0;"> <span id="LC1836" class="line" lang="mosel"> <span class="n" style="color: #333;">modular</span> <span class="n" style="color: #333;">open</span><span class="p">-</span><span class="n" style="color: #333;">source</span> <span class="n" style="color: #333;">framework</span> <span class="n" style="color: #333;">for</span> <span class="n" style="color: #333;">assembly</span> <span class="n" style="color: #333;">development</span><span class="p">.</span></span>
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1837
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1837
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<pre style="margin: 0;"> <span id="LC1837" class="line" lang="mosel"><span class="n" style="color: #333;">Remark</span><span class="p">:</span> <span class="n" style="color: #333;">Genome</span> <span class="n" style="color: #333;">assembly</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">large</span><span class="p">-</span><span class="n" style="color: #333;">scale</span> <span class="n" style="color: #333;">genome</span> <span class="n" style="color: #333;">alignment</span> <span class="p">(</span><span class="n" style="color: #333;">http</span><span class="p">://</span><span class="n" style="color: #333;">www</span><span class="p">.</span><span class="n" style="color: #333;">cbcb</span><span class="p">.</span><span class="n" style="color: #333;">umd</span><span class="p">.</span><span class="n" style="color: #333;">edu</span><span class="p">/</span><span class="n" style="color: #333;">software</span><span class="p">/)</span></span>
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1838
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1838
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<pre style="margin: 0;"> <span id="LC1838" class="line" lang="mosel"></span>
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1839
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<pre style="margin: 0;">-<span id="LC1839" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">minimus</span></span>
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1839
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<pre style="margin: 0;">+<span id="LC1839" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">minimus</span></span>
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1840
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1840
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<pre style="margin: 0;"> <span id="LC1840" class="line" lang="mosel"><span class="n" style="color: #333;">Homepage</span><span class="p">:</span> <span class="n" style="color: #333;">http</span><span class="p">://</span><span class="n" style="color: #333;">amos</span><span class="p">.</span><span class="n" style="color: #333;">sourceforge</span><span class="p">.</span><span class="n" style="color: #333;">net</span><span class="p">/</span><span class="n" style="color: #333;">docs</span><span class="p">/</span><span class="n" style="color: #333;">pipeline</span><span class="p">/</span><span class="n" style="color: #333;">minimus</span><span class="p">.</span><span class="n" style="color: #333;">html</span></span>
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1841
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1841
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<pre style="margin: 0;"> <span id="LC1841" class="line" lang="mosel"><span class="n" style="color: #333;">License</span><span class="p">:</span> <span class="n" style="color: #333;">Artistic</span></span>
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1842
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1842
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<pre style="margin: 0;"> <span id="LC1842" class="line" lang="mosel"><span class="n" style="color: #333;">Pkg</span><span class="p">-</span><span class="n" style="color: #333;">Description</span><span class="p">:</span> <span class="n" style="color: #333;">AMOS</span> <span class="n" style="color: #333;">lightweight</span> <span class="n" style="color: #333;">assembler</span></span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="1869" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="1869" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -1869,7 +1869,7 @@ Pkg-Description: AMOS lightweight assembler</td>
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1869
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1869
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<pre style="margin: 0;"> <span id="LC1869" class="line" lang="mosel"> <span class="n" style="color: #333;">develop</span> <span class="n" style="color: #333;">a</span> <span class="n" style="color: #333;">modular</span> <span class="n" style="color: #333;">open</span><span class="p">-</span><span class="n" style="color: #333;">source</span> <span class="n" style="color: #333;">framework</span> <span class="n" style="color: #333;">for</span> <span class="n" style="color: #333;">assembly</span> <span class="n" style="color: #333;">development</span><span class="p">.</span></span>
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1870
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1870
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<pre style="margin: 0;"> <span id="LC1870" class="line" lang="mosel"><span class="n" style="color: #333;">Remark</span><span class="p">:</span> <span class="n" style="color: #333;">Genome</span> <span class="n" style="color: #333;">assembly</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">large</span><span class="p">-</span><span class="n" style="color: #333;">scale</span> <span class="n" style="color: #333;">genome</span> <span class="n" style="color: #333;">alignment</span> <span class="p">(</span><span class="n" style="color: #333;">http</span><span class="p">://</span><span class="n" style="color: #333;">www</span><span class="p">.</span><span class="n" style="color: #333;">cbcb</span><span class="p">.</span><span class="n" style="color: #333;">umd</span><span class="p">.</span><span class="n" style="color: #333;">edu</span><span class="p">/</span><span class="n" style="color: #333;">software</span><span class="p">/)</span></span>
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1871
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1871
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<pre style="margin: 0;"> <span id="LC1871" class="line" lang="mosel"></span>
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1872
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<pre style="margin: 0;">-<span id="LC1872" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggests</span></span><span class="p">:</span> <span class="n" style="color: #333;">catissuecore</span></span>
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1872
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<pre style="margin: 0;">+<span id="LC1872" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Ignore</span></span><span class="p">:</span> <span class="n" style="color: #333;">catissuecore</span></span>
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1873
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1873
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<pre style="margin: 0;"> <span id="LC1873" class="line" lang="mosel"><span class="n" style="color: #333;">Homepage</span><span class="p">:</span> <span class="n" style="color: #333;">https</span><span class="p">://</span><span class="n" style="color: #333;">cabig</span><span class="p">.</span><span class="n" style="color: #333;">nci</span><span class="p">.</span><span class="n" style="color: #333;">nih</span><span class="p">.</span><span class="n" style="color: #333;">gov</span><span class="p">/</span><span class="n" style="color: #333;">tools</span><span class="p">/</span><span class="n" style="color: #333;">catissuecore</span></span>
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1874
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1874
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<pre style="margin: 0;"> <span id="LC1874" class="line" lang="mosel"><span class="n" style="color: #333;">License</span><span class="p">:</span> <span class="k" style="font-weight: 600;">to</span> <span class="n" style="color: #333;">be</span> <span class="n" style="color: #333;">clarified</span><span class="p">,</span> <span class="n" style="color: #333;">NCICB</span> <span class="n" style="color: #333;">Open</span> <span class="n" style="color: #333;">Source</span> <span class="n" style="color: #333;">Project</span> <span class="n" style="color: #333;">Site</span></span>
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1875
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1875
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<pre style="margin: 0;"> <span id="LC1875" class="line" lang="mosel"><span class="n" style="color: #333;">Pkg</span><span class="p">-</span><span class="n" style="color: #333;">Description</span><span class="p">:</span> <span class="n" style="color: #333;">biospecimen</span> <span class="n" style="color: #333;">inventory</span><span class="p">,</span> <span class="n" style="color: #333;">tracking</span><span class="p">,</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">basic</span> <span class="n" style="color: #333;">annotation</span></span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="1928" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="1928" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -1928,7 +1928,7 @@ Pkg-Description: Transcript Annotation Prioritization and Screening System</td>
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1928
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1928
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<pre style="margin: 0;"> <span id="LC1928" class="line" lang="mosel"><span class="s1" style="color: #d14;">Remark: Found at</span></span>
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1929
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1929
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<pre style="margin: 0;"> <span id="LC1929" class="line" lang="mosel"><span class="s1" style="color: #d14;"> http://gforge.nci.nih.gov/softwaremap/trove_list.php?form_cat=337</span></span>
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1930
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1930
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<pre style="margin: 0;"> <span id="LC1930" class="line" lang="mosel"></span>
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1931
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<pre style="margin: 0;">-<span id="LC1931" class="line" lang="mosel"><span class="s1" style="color: #d14;"><span class="idiff left right">Suggest</span>s: bambus</span></span>
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1931
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<pre style="margin: 0;">+<span id="LC1931" class="line" lang="mosel"><span class="s1" style="color: #d14;"><span class="idiff left right">Recommend</span>s: bambus</span></span>
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1932
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1932
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<pre style="margin: 0;"> <span id="LC1932" class="line" lang="mosel"><span class="s1" style="color: #d14;">Homepage: http://amos.sourceforge.net/docs/bambus/</span></span>
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1933
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1933
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<pre style="margin: 0;"> <span id="LC1933" class="line" lang="mosel"><span class="s1" style="color: #d14;">License: Artistic</span></span>
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1934
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1934
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<pre style="margin: 0;"> <span id="LC1934" class="line" lang="mosel"><span class="s1" style="color: #d14;">Pkg-Description: hierarchical approach to building contig scaffolds</span></span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="1943" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="1943" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -1943,7 +1943,7 @@ Pkg-Description: hierarchical approach to building contig scaffolds</td>
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1943
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1943
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<pre style="margin: 0;"> <span id="LC1943" class="line" lang="mosel"><span class="s1" style="color: #d14;"> integrated with the AMOS package (see http://amos.sourceforge.net/)</span></span>
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1944
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1944
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<pre style="margin: 0;"> <span id="LC1944" class="line" lang="mosel"><span class="s1" style="color: #d14;">Remark: Genome assembly and large-scale genome alignment (http://www.cbcb.umd.edu/software/)</span></span>
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1945
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1945
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<pre style="margin: 0;"> <span id="LC1945" class="line" lang="mosel"></span>
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1946
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<pre style="margin: 0;">-<span id="LC1946" class="line" lang="mosel"><span class="s1" style="color: #d14;"><span class="idiff left right">Suggest</span>s: gmv</span></span>
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1946
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<pre style="margin: 0;">+<span id="LC1946" class="line" lang="mosel"><span class="s1" style="color: #d14;"><span class="idiff left right">Recommend</span>s: gmv</span></span>
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1947
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1947
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<pre style="margin: 0;"> <span id="LC1947" class="line" lang="mosel"><span class="s1" style="color: #d14;">Homepage: http://murasaki.dna.bio.keio.ac.jp/wiki/index.php?GMV</span></span>
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1948
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1948
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<pre style="margin: 0;"> <span id="LC1948" class="line" lang="mosel"><span class="s1" style="color: #d14;">License: GPL</span></span>
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<td class="diff-line-num old_line" data-linenumber="1949" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1949
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<td class="diff-line-num new_line" data-linenumber="1949" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1949
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<pre style="margin: 0;"> <span id="LC1949" class="line" lang="mosel"><span class="s1" style="color: #d14;">Pkg-Description: comparative genome browser for Murasaki</span></span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="1951" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="1951" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -1951,14 +1951,14 @@ Pkg-Description: comparative genome browser for Murasaki</td>
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1951
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1951
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<pre style="margin: 0;"> <span id="LC1951" class="line" lang="mosel"><span class="s1" style="color: #d14;"> anchors from Murasaki, annotation data from GenBank files, and</span></span>
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1952
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1952
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<pre style="margin: 0;"> <span id="LC1952" class="line" lang="mosel"><span class="s1" style="color: #d14;"> expression / prediction score from GFF files.</span></span>
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1953
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1953
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<pre style="margin: 0;"> <span id="LC1953" class="line" lang="mosel"></span>
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<td class="diff-line-num old old_line" data-linenumber="1954" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1954
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<pre style="margin: 0;">-<span id="LC1954" class="line" lang="mosel"><span class="s1" style="color: #d14;"><span class="idiff left right">Suggest</span>s: pyrophosphate-tools</span></span>
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<td class="diff-line-num new old_line" data-linenumber="1955" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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1954
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<pre style="margin: 0;">+<span id="LC1954" class="line" lang="mosel"><span class="s1" style="color: #d14;"><span class="idiff left right">Recommend</span>s: pyrophosphate-tools</span></span>
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1955
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1955
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<pre style="margin: 0;"> <span id="LC1955" class="line" lang="mosel"><span class="s1" style="color: #d14;">Homepage: http://www-naweb.iaea.org/nafa/ipc/public/d4_pbl_6a.html</span></span>
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<td class="diff-line-num old_line" data-linenumber="1956" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1956
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1956
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<pre style="margin: 0;"> <span id="LC1956" class="line" lang="mosel"><span class="s1" style="color: #d14;">License: not specified</span></span>
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<td class="diff-line-num old_line" data-linenumber="1957" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1957
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1957
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<pre style="margin: 0;"> <span id="LC1957" class="line" lang="mosel"><span class="s1" style="color: #d14;">Pkg-Description: for assembling and searching pyrophosphate sequence data</span></span>
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1958
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1958
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<pre style="margin: 0;"> <span id="LC1958" class="line" lang="mosel"><span class="s1" style="color: #d14;"> Simple tools for assembling and searching high-density picolitre</span></span>
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<td class="diff-line-num old_line" data-linenumber="1959" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1959
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1959
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<pre style="margin: 0;"> <span id="LC1959" class="line" lang="mosel"><span class="s1" style="color: #d14;"> pyrophosphate sequence data.</span></span>
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1960
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1960
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<pre style="margin: 0;"> <span id="LC1960" class="line" lang="mosel"></span>
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1961
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<pre style="margin: 0;">-<span id="LC1961" class="line" lang="mosel"><span class="s1" style="color: #d14;"><span class="idiff left right">Suggest</span>s: figaro</span></span>
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1961
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<pre style="margin: 0;">+<span id="LC1961" class="line" lang="mosel"><span class="s1" style="color: #d14;"><span class="idiff left right">Recommend</span>s: figaro</span></span>
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<td class="diff-line-num old_line" data-linenumber="1962" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1962
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1962
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<pre style="margin: 0;"> <span id="LC1962" class="line" lang="mosel"><span class="s1" style="color: #d14;">Homepage: http://amos.sourceforge.net/Figaro/Figaro.html</span></span>
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<td class="diff-line-num old_line" data-linenumber="1963" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1963
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1963
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<pre style="margin: 0;"> <span id="LC1963" class="line" lang="mosel"><span class="s1" style="color: #d14;">License: Artistic</span></span>
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<td class="diff-line-num old_line" data-linenumber="1964" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1964
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<td class="diff-line-num new_line" data-linenumber="1964" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1964
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<pre style="margin: 0;"> <span id="LC1964" class="line" lang="mosel"><span class="s1" style="color: #d14;">Pkg-Description: novel vector trimming software</span></span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="1971" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="1971" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -1971,7 +1971,7 @@ Pkg-Description: novel vector trimming software</td>
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<td class="diff-line-num old_line" data-linenumber="1971" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1971
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1971
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<pre style="margin: 0;"> <span id="LC1971" class="line" lang="mosel"> <span class="n" style="color: #333;">part</span> <span class="k" style="font-weight: 600;">of</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">AMOS</span> <span class="n" style="color: #333;">suite</span><span class="p">.</span></span>
</pre>
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1972
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1972
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<pre style="margin: 0;"> <span id="LC1972" class="line" lang="mosel"><span class="n" style="color: #333;">Remark</span><span class="p">:</span> <span class="n" style="color: #333;">Genome</span> <span class="n" style="color: #333;">assembly</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">large</span><span class="p">-</span><span class="n" style="color: #333;">scale</span> <span class="n" style="color: #333;">genome</span> <span class="n" style="color: #333;">alignment</span> <span class="p">(</span><span class="n" style="color: #333;">http</span><span class="p">://</span><span class="n" style="color: #333;">www</span><span class="p">.</span><span class="n" style="color: #333;">cbcb</span><span class="p">.</span><span class="n" style="color: #333;">umd</span><span class="p">.</span><span class="n" style="color: #333;">edu</span><span class="p">/</span><span class="n" style="color: #333;">software</span><span class="p">/)</span></span>
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1973
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<td class="diff-line-num new_line" data-linenumber="1973" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1973
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<pre style="margin: 0;"> <span id="LC1973" class="line" lang="mosel"></span>
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<td class="diff-line-num old old_line" data-linenumber="1974" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1974
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<td class="diff-line-num new_line old" data-linenumber="1974" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC1974" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">mirbase</span></span>
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1974
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<pre style="margin: 0;">+<span id="LC1974" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">mirbase</span></span>
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1975
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1975
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<pre style="margin: 0;"> <span id="LC1975" class="line" lang="mosel"><span class="n" style="color: #333;">Homepage</span><span class="p">:</span> <span class="n" style="color: #333;">http</span><span class="p">://</span><span class="n" style="color: #333;">microrna</span><span class="p">.</span><span class="n" style="color: #333;">sanger</span><span class="p">.</span><span class="n" style="color: #333;">ac</span><span class="p">.</span><span class="n" style="color: #333;">uk</span><span class="p">/</span></span>
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1976
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1976
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<pre style="margin: 0;"> <span id="LC1976" class="line" lang="mosel"><span class="n" style="color: #333;">License</span><span class="p">:</span> <span class="k" style="font-weight: 600;">Public</span> <span class="n" style="color: #333;">Domain</span></span>
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<td class="diff-line-num old_line" data-linenumber="1977" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1977
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1977
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<pre style="margin: 0;"> <span id="LC1977" class="line" lang="mosel"><span class="n" style="color: #333;">WNPP</span><span class="p">:</span> <span class="m" style="color: #099;">420938</span></span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="2017" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="2017" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -2017,7 +2017,7 @@ X-Pkg-Description: fast computation of maximal repeats in complete genomes</td>
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2017
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2017
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<pre style="margin: 0;"> <span id="LC2017" class="line" lang="mosel"><span class="s1" style="color: #d14;">X-Note: Code is not redistributable see mailing list discussion at</span></span>
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2018
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2018
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<pre style="margin: 0;"> <span id="LC2018" class="line" lang="mosel"><span class="s1" style="color: #d14;"> http://lists.debian.org/debian-med/2012/07/msg00195.html</span></span>
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2019
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2019
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<pre style="margin: 0;"> <span id="LC2019" class="line" lang="mosel"></span>
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2020
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<pre style="margin: 0;">-<span id="LC2020" class="line" lang="mosel"><span class="s1" style="color: #d14;"><span class="idiff left right">Suggest</span>s: uniprime</span></span>
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<td class="diff-line-num new old_line" data-linenumber="2021" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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2020
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<pre style="margin: 0;">+<span id="LC2020" class="line" lang="mosel"><span class="s1" style="color: #d14;"><span class="idiff left right">Recommend</span>s: uniprime</span></span>
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<td class="diff-line-num old_line" data-linenumber="2021" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2021
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<td class="diff-line-num new_line" data-linenumber="2021" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2021
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<pre style="margin: 0;"> <span id="LC2021" class="line" lang="mosel"><span class="s1" style="color: #d14;">Homepage: http://code.google.com/p/uniprime/</span></span>
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<td class="diff-line-num old_line" data-linenumber="2022" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2022
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<td class="diff-line-num new_line" data-linenumber="2022" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2022
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<pre style="margin: 0;"> <span id="LC2022" class="line" lang="mosel"><span class="s1" style="color: #d14;">License: GPL-3+</span></span>
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<td class="diff-line-num old_line" data-linenumber="2023" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2023
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2023
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<pre style="margin: 0;"> <span id="LC2023" class="line" lang="mosel"><span class="s1" style="color: #d14;">Responsible: Charles Plessy <plessy@debian.org></span></span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="2033" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="2033" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -2033,7 +2033,7 @@ Pkg-Description: workflow-based platform for universal primer design</td>
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2033
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<td class="diff-line-num new_line" data-linenumber="2033" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2033
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<pre style="margin: 0;"> <span id="LC2033" class="line" lang="mosel"><span class="s1" style="color: #d14;"> generates successful cross-species primers that take into account the</span></span>
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<td class="diff-line-num old_line" data-linenumber="2034" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2034
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<td class="diff-line-num new_line" data-linenumber="2034" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2034
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<pre style="margin: 0;"> <span id="LC2034" class="line" lang="mosel"><span class="s1" style="color: #d14;"> biological aspects of the PCR.</span></span>
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2035
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2035
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<pre style="margin: 0;"> <span id="LC2035" class="line" lang="mosel"></span>
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2036
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<td class="diff-line-num new_line old" data-linenumber="2036" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC2036" class="line" lang="mosel"><span class="s1" style="color: #d14;"><span class="idiff left right">Suggest</span>s: genetrack</span></span>
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<td class="diff-line-num new old_line" data-linenumber="2037" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="2036" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
2036
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<pre style="margin: 0;">+<span id="LC2036" class="line" lang="mosel"><span class="s1" style="color: #d14;"><span class="idiff left right">Recommend</span>s: genetrack</span></span>
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2037
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<td class="diff-line-num new_line" data-linenumber="2037" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2037
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<pre style="margin: 0;"> <span id="LC2037" class="line" lang="mosel"><span class="s1" style="color: #d14;">Homepage: http://sysbio.bx.psu.edu/genetrack.html</span></span>
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<td class="diff-line-num old_line" data-linenumber="2038" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2038
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2038
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<pre style="margin: 0;"> <span id="LC2038" class="line" lang="mosel"><span class="s1" style="color: #d14;">License: MIT</span></span>
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2039
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<td class="diff-line-num new_line" data-linenumber="2039" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2039
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<pre style="margin: 0;"> <span id="LC2039" class="line" lang="mosel"><span class="s1" style="color: #d14;">Responsible: Charles Plessy <plessy@debian.org></span></span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="2043" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="2043" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -2043,7 +2043,7 @@ Pkg-Description: genomic data storage and visualization framework</td>
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2043
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2043
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<pre style="margin: 0;"> <span id="LC2043" class="line" lang="mosel"><span class="s1" style="color: #d14;"> analyze data obtained via high-throughput rapid sequencing platforms such as</span></span>
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2044
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2044
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<pre style="margin: 0;"> <span id="LC2044" class="line" lang="mosel"><span class="s1" style="color: #d14;"> the 454 and Solexa as well as tiling array data based on various platforms.</span></span>
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2045
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2045
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<pre style="margin: 0;"> <span id="LC2045" class="line" lang="mosel"></span>
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2046
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<pre style="margin: 0;">-<span id="LC2046" class="line" lang="mosel"><span class="s1" style="color: #d14;"><span class="idiff left right">Suggest</span>s: operondb</span></span>
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<td class="diff-line-num new old_line" data-linenumber="2047" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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2046
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<pre style="margin: 0;">+<span id="LC2046" class="line" lang="mosel"><span class="s1" style="color: #d14;"><span class="idiff left right">Recommend</span>s: operondb</span></span>
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2047
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2047
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<pre style="margin: 0;"> <span id="LC2047" class="line" lang="mosel"><span class="s1" style="color: #d14;">Homepage: http://www.cbcb.umd.edu/cgi-bin/operons/operons.cgi</span></span>
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2048
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<td class="diff-line-num new_line" data-linenumber="2048" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2048
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<pre style="margin: 0;"> <span id="LC2048" class="line" lang="mosel"><span class="s1" style="color: #d14;">License: to be clarified</span></span>
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<td class="diff-line-num old_line" data-linenumber="2049" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2049
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2049
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<pre style="margin: 0;"> <span id="LC2049" class="line" lang="mosel"><span class="s1" style="color: #d14;">Pkg-Description: detect and analyze conserved gene pairs</span></span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="2072" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="2072" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -2072,7 +2072,7 @@ Remark: Other sequence analysis tools (http://www.cbcb.umd.edu/software/);</td>
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2072
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<td class="diff-line-num new_line" data-linenumber="2072" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2072
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<pre style="margin: 0;"> <span id="LC2072" class="line" lang="mosel"><span class="s1" style="color: #d14;"> no info about license or downloadable code found, but tried to</span></span>
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<td class="diff-line-num old_line" data-linenumber="2073" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2073
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2073
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<pre style="margin: 0;"> <span id="LC2073" class="line" lang="mosel"><span class="s1" style="color: #d14;"> contact authors.</span></span>
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2074
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2074
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<pre style="margin: 0;"> <span id="LC2074" class="line" lang="mosel"></span>
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2075
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<td class="diff-line-num new_line old" data-linenumber="2075" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC2075" class="line" lang="mosel"><span class="s1" style="color: #d14;"><span class="idiff left right">Suggest</span>s: trnascan-se</span></span>
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<td class="diff-line-num new new_line" data-linenumber="2075" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
2075
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<pre style="margin: 0;">+<span id="LC2075" class="line" lang="mosel"><span class="s1" style="color: #d14;"><span class="idiff left right">Recommend</span>s: trnascan-se</span></span>
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2076
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2076
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<pre style="margin: 0;"> <span id="LC2076" class="line" lang="mosel"></span>
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<td class="diff-line-num old_line" data-linenumber="2077" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2077
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2077
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<pre style="margin: 0;"> <span id="LC2077" class="line" lang="mosel"><span class="s1" style="color: #d14;">Comment: If you stumble upon alfresco at</span></span>
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<td class="diff-line-num old_line" data-linenumber="2078" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2078
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2078
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<pre style="margin: 0;"> <span id="LC2078" class="line" lang="mosel"><span class="s1" style="color: #d14;"> http://www.sanger.ac.uk/Software/Alfresco/ - it seems outdated and</span></span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="2085" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="2085" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -2085,7 +2085,7 @@ Comment: If you stumble upon angler at</td>
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2085
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2085
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<pre style="margin: 0;"> <span id="LC2085" class="line" lang="mosel"><span class="s1" style="color: #d14;"> this is probably also not for us except somebody has real interest</span></span>
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<td class="diff-line-num old_line" data-linenumber="2086" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2086
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2086
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<pre style="margin: 0;"> <span id="LC2086" class="line" lang="mosel"><span class="s1" style="color: #d14;"> and volunteers to clarify the license.</span></span>
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2087
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2087
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<pre style="margin: 0;"> <span id="LC2087" class="line" lang="mosel"></span>
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<td class="diff-line-num old old_line" data-linenumber="2088" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
2088
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<pre style="margin: 0;">-<span id="LC2088" class="line" lang="mosel"><span class="s1" style="color: #d14;"><span class="idiff left right">Suggest</span>s: cdna-db</span></span>
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<td class="diff-line-num new old_line" data-linenumber="2089" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="2088" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
2088
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<pre style="margin: 0;">+<span id="LC2088" class="line" lang="mosel"><span class="s1" style="color: #d14;"><span class="idiff left right">Recommend</span>s: cdna-db</span></span>
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<td class="diff-line-num old_line" data-linenumber="2089" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2089
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<td class="diff-line-num new_line" data-linenumber="2089" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2089
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<pre style="margin: 0;"> <span id="LC2089" class="line" lang="mosel"><span class="s1" style="color: #d14;">Homepage: http://www.sanger.ac.uk/Software/analysis/cdna_db/</span></span>
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2090
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2090
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<pre style="margin: 0;"> <span id="LC2090" class="line" lang="mosel"><span class="s1" style="color: #d14;">License: Artistic</span></span>
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<td class="diff-line-num old_line" data-linenumber="2091" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2091
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2091
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<pre style="margin: 0;"> <span id="LC2091" class="line" lang="mosel"><span class="s1" style="color: #d14;">Pkg-Description: quality-control checking of finished cDNA clone sequences</span></span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="2112" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="2112" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -2112,9 +2112,9 @@ Pkg-Description: quality-control checking of finished cDNA clone sequences</td>
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2112
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2112
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<pre style="margin: 0;"> <span id="LC2112" class="line" lang="mosel"><span class="s1" style="color: #d14;"> dump cDNA clones sequences (such as those that passed the QC</span></span>
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2113
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2113
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<pre style="margin: 0;"> <span id="LC2113" class="line" lang="mosel"><span class="s1" style="color: #d14;"> checking) from the cdna_db.</span></span>
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2114
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2114
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<pre style="margin: 0;"> <span id="LC2114" class="line" lang="mosel"></span>
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2115
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<pre style="margin: 0;">-<span id="LC2115" class="line" lang="mosel"><span class="s1" style="color: #d14;"><span class="idiff left right">Suggest</span>s: coot</span></span>
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2115
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<pre style="margin: 0;">+<span id="LC2115" class="line" lang="mosel"><span class="s1" style="color: #d14;"><span class="idiff left right">Recommend</span>s: coot</span></span>
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2116
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2116
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<pre style="margin: 0;"> <span id="LC2116" class="line" lang="mosel"></span>
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2117
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<pre style="margin: 0;">-<span id="LC2117" class="line" lang="mosel"><span class="s1" style="color: #d14;"><span class="idiff left right">Suggest</span>s: caftools</span></span>
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2117
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<pre style="margin: 0;">+<span id="LC2117" class="line" lang="mosel"><span class="s1" style="color: #d14;"><span class="idiff left right">Recommend</span>s: caftools</span></span>
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2118
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2118
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<pre style="margin: 0;"> <span id="LC2118" class="line" lang="mosel"></span>
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2119
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2119
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<pre style="margin: 0;"> <span id="LC2119" class="line" lang="mosel"><span class="s1" style="color: #d14;">Recommends: roche454ace2caf</span></span>
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<td class="diff-line-num old_line" data-linenumber="2120" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2120
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2120
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<pre style="margin: 0;"> <span id="LC2120" class="line" lang="mosel"><span class="s1" style="color: #d14;">Homepage: http://genome.imb-jena.de/software/roche454ace2caf/</span></span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="2143" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="2143" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -2143,7 +2143,7 @@ Remark: The BioLinux distribution http://envgen.nox.ac.uk/biolinux.html</td>
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2143
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2143
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<pre style="margin: 0;"> <span id="LC2143" class="line" lang="mosel"><span class="s1" style="color: #d14;"> Format) or GAP4. This package includes tools to convert assemblies</span></span>
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2144
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2144
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<pre style="margin: 0;"> <span id="LC2144" class="line" lang="mosel"><span class="s1" style="color: #d14;"> from Newbler'</span><span class="n" style="color: #333;">s</span> <span class="n" style="color: #333;">ace</span> <span class="n" style="color: #333;">format</span> <span class="n" style="color: #333;">for</span> <span class="n" style="color: #333;">loading</span> <span class="n" style="color: #333;">into</span> <span class="n" style="color: #333;">a</span> <span class="n" style="color: #333;">gap4</span> <span class="n" style="color: #333;">assembly</span><span class="p">.</span></span>
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2145
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2145
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<pre style="margin: 0;"> <span id="LC2145" class="line" lang="mosel"></span>
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2146
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<td class="diff-line-num new_line old" data-linenumber="2146" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC2146" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">big</span><span class="p">-</span><span class="n" style="color: #333;">blast</span></span>
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2146
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<pre style="margin: 0;">+<span id="LC2146" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">big</span><span class="p">-</span><span class="n" style="color: #333;">blast</span></span>
</pre>
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2147
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2147
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<pre style="margin: 0;"> <span id="LC2147" class="line" lang="mosel"><span class="n" style="color: #333;">Homepage</span><span class="p">:</span> <span class="n" style="color: #333;">ftp</span><span class="p">://</span><span class="n" style="color: #333;">ftp</span><span class="p">.</span><span class="n" style="color: #333;">sanger</span><span class="p">.</span><span class="n" style="color: #333;">ac</span><span class="p">.</span><span class="n" style="color: #333;">uk</span><span class="p">/</span><span class="n" style="color: #333;">pub</span><span class="p">/</span><span class="n" style="color: #333;">pathogens</span><span class="p">/</span><span class="n" style="color: #333;">software</span><span class="p">/</span><span class="n" style="color: #333;">artemis</span><span class="p">/</span><span class="n" style="color: #333;">extra</span><span class="p">/</span><span class="n" style="color: #333;">big_blast</span><span class="p">.</span><span class="n" style="color: #333;">pl</span></span>
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2148
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2148
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<pre style="margin: 0;"> <span id="LC2148" class="line" lang="mosel"><span class="n" style="color: #333;">License</span><span class="p">:</span> <span class="k" style="font-weight: 600;">not</span> <span class="n" style="color: #333;">specified</span></span>
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2149
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2149
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<pre style="margin: 0;"> <span id="LC2149" class="line" lang="mosel"><span class="n" style="color: #333;">Responsible</span><span class="p">:</span> <span class="n" style="color: #333;">BioLinux</span> <span class="p">-</span> <span class="n" style="color: #333;">Stewart</span> <span class="n" style="color: #333;">Houten</span> <span class="p"><</span><span class="n" style="color: #333;">shou</span><span class="p">@</span><span class="n" style="color: #333;">ceh</span><span class="p">.</span><span class="n" style="color: #333;">ac</span><span class="p">.</span><span class="n" style="color: #333;">uk</span><span class="p">></span></span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="2154" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="2154" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -2154,7 +2154,7 @@ Pkg-Description: Helper tool to run blast on large sequences</td>
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2154
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2154
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<pre style="margin: 0;"> <span id="LC2154" class="line" lang="mosel"> <span class="n" style="color: #333;">containing</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">hits</span><span class="p">.</span></span>
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2155
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2155
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<pre style="margin: 0;"> <span id="LC2155" class="line" lang="mosel"><span class="n" style="color: #333;">Remark</span><span class="p">:</span> <span class="n" style="color: #333;">This</span> <span class="k" style="font-weight: 600;">package</span> <span class="n" style="color: #333;">ships</span> <span class="k" style="font-weight: 600;">with</span> <span class="n" style="color: #333;">BioLinux</span> <span class="n" style="color: #333;">http</span><span class="p">://</span><span class="n" style="color: #333;">envgen</span><span class="p">.</span><span class="n" style="color: #333;">nox</span><span class="p">.</span><span class="n" style="color: #333;">ac</span><span class="p">.</span><span class="n" style="color: #333;">uk</span><span class="p">/</span><span class="n" style="color: #333;">biolinux</span><span class="p">.</span><span class="n" style="color: #333;">html</span></span>
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2156
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2156
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<pre style="margin: 0;"> <span id="LC2156" class="line" lang="mosel"></span>
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2157
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<td class="diff-line-num new_line old" data-linenumber="2157" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC2157" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">estferret</span></span>
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2157
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<pre style="margin: 0;">+<span id="LC2157" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">estferret</span></span>
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2158
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2158
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<pre style="margin: 0;"> <span id="LC2158" class="line" lang="mosel"><span class="n" style="color: #333;">Homepage</span><span class="p">:</span> <span class="n" style="color: #333;">http</span><span class="p">://</span><span class="n" style="color: #333;">legr</span><span class="p">.</span><span class="n" style="color: #333;">liv</span><span class="p">.</span><span class="n" style="color: #333;">ac</span><span class="p">.</span><span class="n" style="color: #333;">uk</span><span class="p">/</span><span class="n" style="color: #333;">EST</span><span class="p">-</span><span class="n" style="color: #333;">ferret</span><span class="p">/</span><span class="n" style="color: #333;">index</span><span class="p">.</span><span class="n" style="color: #333;">htm</span></span>
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2159
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2159
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<pre style="margin: 0;"> <span id="LC2159" class="line" lang="mosel"><span class="n" style="color: #333;">License</span><span class="p">:</span> <span class="k" style="font-weight: 600;">to</span> <span class="n" style="color: #333;">be</span> <span class="n" style="color: #333;">clarified</span></span>
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2160
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2160
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<pre style="margin: 0;"> <span id="LC2160" class="line" lang="mosel"><span class="n" style="color: #333;">Responsible</span><span class="p">:</span> <span class="n" style="color: #333;">BioLinux</span> <span class="p">-</span> <span class="n" style="color: #333;">Bela</span> <span class="n" style="color: #333;">Tiwari</span> <span class="p"><</span><span class="n" style="color: #333;">btiwari</span><span class="p">@</span><span class="n" style="color: #333;">ceh</span><span class="p">.</span><span class="n" style="color: #333;">ac</span><span class="p">.</span><span class="n" style="color: #333;">uk</span><span class="p">></span></span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="2201" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="2201" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -2201,11 +2201,11 @@ Pkg-Description: processes, clusters and annotates EST data</td>
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2201
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2201
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<pre style="margin: 0;"> <span id="LC2201" class="line" lang="mosel"> <span class="n" style="color: #333;">a</span> <span class="n" style="color: #333;">MySQL</span> <span class="n" style="color: #333;">database</span> <span class="k" style="font-weight: 600;">or</span> <span class="n" style="color: #333;">web</span><span class="p">-</span><span class="n" style="color: #333;">browsable</span> <span class="n" style="color: #333;">search</span> <span class="n" style="color: #333;">tool</span><span class="p">.</span></span>
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2202
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2202
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<pre style="margin: 0;"> <span id="LC2202" class="line" lang="mosel"><span class="n" style="color: #333;">Remark</span><span class="p">:</span> <span class="n" style="color: #333;">This</span> <span class="k" style="font-weight: 600;">package</span> <span class="n" style="color: #333;">ships</span> <span class="k" style="font-weight: 600;">with</span> <span class="n" style="color: #333;">BioLinux</span> <span class="n" style="color: #333;">http</span><span class="p">://</span><span class="n" style="color: #333;">envgen</span><span class="p">.</span><span class="n" style="color: #333;">nox</span><span class="p">.</span><span class="n" style="color: #333;">ac</span><span class="p">.</span><span class="n" style="color: #333;">uk</span><span class="p">/</span><span class="n" style="color: #333;">biolinux</span><span class="p">.</span><span class="n" style="color: #333;">html</span></span>
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2203
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2203
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<pre style="margin: 0;"> <span id="LC2203" class="line" lang="mosel"></span>
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2204
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<pre style="margin: 0;">-<span id="LC2204" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">lamarc</span></span>
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2204
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<pre style="margin: 0;">+<span id="LC2204" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">lamarc</span></span>
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2205
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2205
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<pre style="margin: 0;"> <span id="LC2205" class="line" lang="mosel"></span>
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2206
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<pre style="margin: 0;">-<span id="LC2206" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">lucy</span></span>
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2206
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<pre style="margin: 0;">+<span id="LC2206" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">lucy</span></span>
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2207
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2207
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<pre style="margin: 0;"> <span id="LC2207" class="line" lang="mosel"></span>
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<td class="diff-line-num old old_line" data-linenumber="2208" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
2208
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<td class="diff-line-num new_line old" data-linenumber="2208" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC2208" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">maxd</span></span>
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2208
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<pre style="margin: 0;">+<span id="LC2208" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">maxd</span></span>
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2209
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2209
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<pre style="margin: 0;"> <span id="LC2209" class="line" lang="mosel"><span class="n" style="color: #333;">Homepage</span><span class="p">:</span> <span class="n" style="color: #333;">http</span><span class="p">://</span><span class="n" style="color: #333;">www</span><span class="p">.</span><span class="n" style="color: #333;">bioinf</span><span class="p">.</span><span class="n" style="color: #333;">man</span><span class="p">.</span><span class="n" style="color: #333;">ac</span><span class="p">.</span><span class="n" style="color: #333;">uk</span><span class="p">/</span><span class="n" style="color: #333;">microarray</span><span class="p">/</span><span class="n" style="color: #333;">maxd</span><span class="p">/</span></span>
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2210
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2210
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<pre style="margin: 0;"> <span id="LC2210" class="line" lang="mosel"><span class="n" style="color: #333;">License</span><span class="p">:</span> <span class="n" style="color: #333;">Artistic</span></span>
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2211
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2211
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<pre style="margin: 0;"> <span id="LC2211" class="line" lang="mosel"><span class="n" style="color: #333;">Responsible</span><span class="p">:</span> <span class="n" style="color: #333;">BioLinux</span> <span class="p">-</span> <span class="n" style="color: #333;">Stewart</span> <span class="n" style="color: #333;">Houten</span> <span class="p"><</span><span class="n" style="color: #333;">shou</span><span class="p">@</span><span class="n" style="color: #333;">ceh</span><span class="p">.</span><span class="n" style="color: #333;">ac</span><span class="p">.</span><span class="n" style="color: #333;">uk</span><span class="p">></span></span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="2223" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="2223" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -2223,9 +2223,9 @@ Pkg-Description: data warehouse and visualisation environment for genomic expres</td>
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2223
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2223
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<pre style="margin: 0;"> <span id="LC2223" class="line" lang="mosel"> <span class="n" style="color: #333;">maxdSetup</span> <span class="p">-</span> <span class="n" style="color: #333;">installation</span> <span class="n" style="color: #333;">management</span> <span class="n" style="color: #333;">utility</span></span>
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2224
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<td class="diff-line-num new_line" data-linenumber="2224" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2224
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<pre style="margin: 0;"> <span id="LC2224" class="line" lang="mosel"><span class="n" style="color: #333;">Remark</span><span class="p">:</span> <span class="n" style="color: #333;">This</span> <span class="k" style="font-weight: 600;">package</span> <span class="n" style="color: #333;">ships</span> <span class="k" style="font-weight: 600;">with</span> <span class="n" style="color: #333;">BioLinux</span> <span class="n" style="color: #333;">http</span><span class="p">://</span><span class="n" style="color: #333;">envgen</span><span class="p">.</span><span class="n" style="color: #333;">nox</span><span class="p">.</span><span class="n" style="color: #333;">ac</span><span class="p">.</span><span class="n" style="color: #333;">uk</span><span class="p">/</span><span class="n" style="color: #333;">biolinux</span><span class="p">.</span><span class="n" style="color: #333;">html</span></span>
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<td class="diff-line-num old_line" data-linenumber="2225" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2225
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<td class="diff-line-num new_line" data-linenumber="2225" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2225
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<pre style="margin: 0;"> <span id="LC2225" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="2226" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
2226
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<td class="diff-line-num new_line old" data-linenumber="2226" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC2226" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">mesquite</span></span>
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<td class="diff-line-num new old_line" data-linenumber="2227" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="2226" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
2226
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<pre style="margin: 0;">+<span id="LC2226" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">mesquite</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="2227" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2227
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<td class="diff-line-num new_line" data-linenumber="2227" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2227
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<pre style="margin: 0;"> <span id="LC2227" class="line" lang="mosel"></span>
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<td class="diff-line-num old old_line" data-linenumber="2228" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
2228
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<td class="diff-line-num new_line old" data-linenumber="2228" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC2228" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">migrate</span></span>
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<td class="diff-line-num new old_line" data-linenumber="2229" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="2228" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
2228
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<pre style="margin: 0;">+<span id="LC2228" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">migrate</span></span>
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2229
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<td class="diff-line-num new_line" data-linenumber="2229" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2229
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<pre style="margin: 0;"> <span id="LC2229" class="line" lang="mosel"><span class="n" style="color: #333;">Homepage</span><span class="p">:</span> <span class="n" style="color: #333;">http</span><span class="p">://</span><span class="n" style="color: #333;">popgen</span><span class="p">.</span><span class="n" style="color: #333;">scs</span><span class="p">.</span><span class="n" style="color: #333;">fsu</span><span class="p">.</span><span class="n" style="color: #333;">edu</span><span class="p">/</span><span class="n" style="color: #333;">Migrate</span><span class="p">-</span><span class="n" style="color: #333;">n</span><span class="p">.</span><span class="n" style="color: #333;">html</span></span>
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<td class="diff-line-num old_line" data-linenumber="2230" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2230
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2230
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<pre style="margin: 0;"> <span id="LC2230" class="line" lang="mosel"><span class="n" style="color: #333;">License</span><span class="p">:</span> <span class="k" style="font-weight: 600;">to</span> <span class="n" style="color: #333;">be</span> <span class="n" style="color: #333;">clarified</span></span>
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<td class="diff-line-num old_line" data-linenumber="2231" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2231
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2231
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<pre style="margin: 0;"> <span id="LC2231" class="line" lang="mosel"><span class="n" style="color: #333;">Responsible</span><span class="p">:</span> <span class="n" style="color: #333;">BioLinux</span> <span class="p">-</span> <span class="n" style="color: #333;">Nathan</span> <span class="n" style="color: #333;">S</span> <span class="n" style="color: #333;">Haigh</span> <span class="p"><</span><span class="n" style="color: #333;">n</span><span class="p">.</span><span class="n" style="color: #333;">haigh</span><span class="p">@</span><span class="n" style="color: #333;">sheffield</span><span class="p">.</span><span class="n" style="color: #333;">ac</span><span class="p">.</span><span class="n" style="color: #333;">uk</span><span class="p">></span></span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="2247" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="2247" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -2247,7 +2247,7 @@ Pkg-Description: estimation of population sizes and gene flow using the coalesce</td>
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2247
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<td class="diff-line-num new_line" data-linenumber="2247" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2247
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<pre style="margin: 0;"> <span id="LC2247" class="line" lang="mosel"><span class="s1" style="color: #d14;"> surfaces for all populations and all loci.</span></span>
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<td class="diff-line-num old_line" data-linenumber="2248" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2248
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2248
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<pre style="margin: 0;"> <span id="LC2248" class="line" lang="mosel"><span class="s1" style="color: #d14;">Remark: This package ships with BioLinux http://envgen.nox.ac.uk/biolinux.html</span></span>
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2249
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2249
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<pre style="margin: 0;"> <span id="LC2249" class="line" lang="mosel"></span>
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2250
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<pre style="margin: 0;">-<span id="LC2250" class="line" lang="mosel"><span class="s1" style="color: #d14;"><span class="idiff left right">Suggest</span>s: msatfinder</span></span>
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2250
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<pre style="margin: 0;">+<span id="LC2250" class="line" lang="mosel"><span class="s1" style="color: #d14;"><span class="idiff left right">Recommend</span>s: msatfinder</span></span>
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2251
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<td class="diff-line-num new_line" data-linenumber="2251" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2251
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<pre style="margin: 0;"> <span id="LC2251" class="line" lang="mosel"><span class="s1" style="color: #d14;">Homepage: http://www.genomics.ceh.ac.uk/msatfinder/</span></span>
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<td class="diff-line-num old_line" data-linenumber="2252" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2252
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<td class="diff-line-num new_line" data-linenumber="2252" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2252
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<pre style="margin: 0;"> <span id="LC2252" class="line" lang="mosel"><span class="s1" style="color: #d14;">License: GPL</span></span>
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<td class="diff-line-num old_line" data-linenumber="2253" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2253
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2253
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<pre style="margin: 0;"> <span id="LC2253" class="line" lang="mosel"><span class="s1" style="color: #d14;">Responsible: BioLinux - Stewart Houten <shou@ceh.ac.uk></span></span>
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<td class="diff-line-num unfold js-unfold new_line" data-linenumber="2262" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -2262,7 +2262,7 @@ Pkg-Description: identification and characterization of microsatellites in a com</td>
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2262
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2262
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<pre style="margin: 0;"> <span id="LC2262" class="line" lang="mosel"><span class="s1" style="color: #d14;"> FASTA, EMBL and Swissprot formats are supported.</span></span>
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2263
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2263
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<pre style="margin: 0;"> <span id="LC2263" class="line" lang="mosel"><span class="s1" style="color: #d14;">Remark: This package ships with BioLinux http://envgen.nox.ac.uk/biolinux.html</span></span>
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2264
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2264
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<pre style="margin: 0;"> <span id="LC2264" class="line" lang="mosel"></span>
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2265
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<pre style="margin: 0;">-<span id="LC2265" class="line" lang="mosel"><span class="s1" style="color: #d14;"><span class="idiff left right">Suggest</span>s: oligoarrayaux</span></span>
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<td class="diff-line-num new old_line" data-linenumber="2266" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="2265" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
2265
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<pre style="margin: 0;">+<span id="LC2265" class="line" lang="mosel"><span class="s1" style="color: #d14;"><span class="idiff left right">Recommend</span>s: oligoarrayaux</span></span>
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2266
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2266
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<pre style="margin: 0;"> <span id="LC2266" class="line" lang="mosel"><span class="s1" style="color: #d14;">Homepage: http://dinamelt.bioinfo.rpi.edu/OligoArrayAux.php</span></span>
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2267
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2267
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<pre style="margin: 0;"> <span id="LC2267" class="line" lang="mosel"><span class="s1" style="color: #d14;">License: non-free (fre academical use)</span></span>
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2268
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2268
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<pre style="margin: 0;"> <span id="LC2268" class="line" lang="mosel"><span class="s1" style="color: #d14;">Responsible: BioLinux - Bela Tiwari <btiwari@ceh.ac.uk></span></span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="2289" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="2289" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -2289,7 +2289,7 @@ Remark: This package ships with BioLinux http://envgen.nox.ac.uk/biolinux.html</td>
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2289
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2289
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<pre style="margin: 0;"> <span id="LC2289" class="line" lang="mosel"><span class="s1" style="color: #d14;"> this and so it might make soem sense to list it here - further</span></span>
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<td class="diff-line-num old_line" data-linenumber="2290" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2290
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2290
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<pre style="margin: 0;"> <span id="LC2290" class="line" lang="mosel"><span class="s1" style="color: #d14;"> investigation is needed.</span></span>
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2291
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2291
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<pre style="margin: 0;"> <span id="LC2291" class="line" lang="mosel"></span>
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2292
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<pre style="margin: 0;">-<span id="LC2292" class="line" lang="mosel"><span class="s1" style="color: #d14;"><span class="idiff left right">Suggest</span>s: partigene</span></span>
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<td class="diff-line-num new old_line" data-linenumber="2293" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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2292
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<pre style="margin: 0;">+<span id="LC2292" class="line" lang="mosel"><span class="s1" style="color: #d14;"><span class="idiff left right">Recommend</span>s: partigene</span></span>
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<td class="diff-line-num old_line" data-linenumber="2293" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2293
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2293
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<pre style="margin: 0;"> <span id="LC2293" class="line" lang="mosel"><span class="s1" style="color: #d14;">Homepage: http://www.nematodes.org/bioinformatics/PartiGene/</span></span>
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<td class="diff-line-num old_line" data-linenumber="2294" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2294
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2294
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<pre style="margin: 0;"> <span id="LC2294" class="line" lang="mosel"><span class="s1" style="color: #d14;">License: GPL</span></span>
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2295
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2295
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<pre style="margin: 0;"> <span id="LC2295" class="line" lang="mosel"><span class="s1" style="color: #d14;">Responsible: BioLinux - Bela Tiwari <btiwari@ceh.ac.uk></span></span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="2303" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="2303" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -2303,7 +2303,7 @@ Pkg-Description: generating partial gemomes</td>
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2303
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2303
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<pre style="margin: 0;"> <span id="LC2303" class="line" lang="mosel"><span class="s1" style="color: #d14;"> (putative genes) which we term a partial genome.</span></span>
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2304
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2304
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<pre style="margin: 0;"> <span id="LC2304" class="line" lang="mosel"><span class="s1" style="color: #d14;">Remark: This package ships with BioLinux http://envgen.nox.ac.uk/biolinux.html</span></span>
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2305
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2305
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<pre style="margin: 0;"> <span id="LC2305" class="line" lang="mosel"></span>
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2306
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<pre style="margin: 0;">-<span id="LC2306" class="line" lang="mosel"><span class="s1" style="color: #d14;"><span class="idiff left right">Suggest</span>s: pfaat</span></span>
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2306
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<pre style="margin: 0;">+<span id="LC2306" class="line" lang="mosel"><span class="s1" style="color: #d14;"><span class="idiff left right">Recommend</span>s: pfaat</span></span>
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2307
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2307
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<pre style="margin: 0;"> <span id="LC2307" class="line" lang="mosel"><span class="s1" style="color: #d14;">Homepage: http://pfaat.sourceforge.net/</span></span>
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2308
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2308
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<pre style="margin: 0;"> <span id="LC2308" class="line" lang="mosel"><span class="s1" style="color: #d14;">License: GPL</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="2309" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2309
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<td class="diff-line-num new_line" data-linenumber="2309" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2309
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<pre style="margin: 0;"> <span id="LC2309" class="line" lang="mosel"><span class="s1" style="color: #d14;">Responsible: BioLinux - Dan Swan <dswan@ceh.ac.uk></span></span>
</pre>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="2321" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="2321" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -2321,7 +2321,7 @@ Comment: priam</td>
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<td class="diff-line-num old_line" data-linenumber="2321" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2321
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<td class="diff-line-num new_line" data-linenumber="2321" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2321
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<pre style="margin: 0;"> <span id="LC2321" class="line" lang="mosel"><span class="s1" style="color: #d14;"> project has only a "free as in beer" binary download - so this is not</span></span>
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<td class="diff-line-num old_line" data-linenumber="2322" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2322
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<td class="diff-line-num new_line" data-linenumber="2322" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2322
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<pre style="margin: 0;"> <span id="LC2322" class="line" lang="mosel"><span class="s1" style="color: #d14;"> for us ...</span></span>
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<td class="diff-line-num old_line" data-linenumber="2323" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2323
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<td class="diff-line-num new_line" data-linenumber="2323" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2323
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<pre style="margin: 0;"> <span id="LC2323" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="2324" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
2324
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<td class="diff-line-num new_line old" data-linenumber="2324" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC2324" class="line" lang="mosel"><span class="s1" style="color: #d14;"><span class="idiff left right">Suggest</span>s: prot4est</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="2325" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="2324" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
2324
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<pre style="margin: 0;">+<span id="LC2324" class="line" lang="mosel"><span class="s1" style="color: #d14;"><span class="idiff left right">Recommend</span>s: prot4est</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="2325" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2325
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<td class="diff-line-num new_line" data-linenumber="2325" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2325
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<pre style="margin: 0;"> <span id="LC2325" class="line" lang="mosel"><span class="s1" style="color: #d14;">Homepage: http://xyala.cap.ed.ac.uk/bioinformatics/prot4EST/index.shtml</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="2326" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2326
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<td class="diff-line-num new_line" data-linenumber="2326" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2326
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<pre style="margin: 0;"> <span id="LC2326" class="line" lang="mosel"><span class="s1" style="color: #d14;">License: GPL</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="2327" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2327
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<td class="diff-line-num new_line" data-linenumber="2327" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2327
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<pre style="margin: 0;"> <span id="LC2327" class="line" lang="mosel"><span class="s1" style="color: #d14;">Responsible: BioLinux - Bela Tiwari <btiwari@ceh.ac.uk></span></span>
</pre>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="2333" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="2333" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -2333,7 +2333,7 @@ Pkg-Description: EST protein translation suite</td>
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<td class="diff-line-num old_line" data-linenumber="2333" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2333
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<td class="diff-line-num new_line" data-linenumber="2333" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2333
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<pre style="margin: 0;"> <span id="LC2333" class="line" lang="mosel"><span class="s1" style="color: #d14;"> translating ESTs.</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="2334" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2334
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<td class="diff-line-num new_line" data-linenumber="2334" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2334
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<pre style="margin: 0;"> <span id="LC2334" class="line" lang="mosel"><span class="s1" style="color: #d14;">Remark: This package ships with BioLinux http://envgen.nox.ac.uk/biolinux.html</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="2335" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2335
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<td class="diff-line-num new_line" data-linenumber="2335" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2335
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<pre style="margin: 0;"> <span id="LC2335" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="2336" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
2336
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<td class="diff-line-num new_line old" data-linenumber="2336" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC2336" class="line" lang="mosel"><span class="s1" style="color: #d14;"><span class="idiff left right">Suggest</span>s: qtlcart</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="2337" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="2336" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
2336
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<pre style="margin: 0;">+<span id="LC2336" class="line" lang="mosel"><span class="s1" style="color: #d14;"><span class="idiff left right">Recommend</span>s: qtlcart</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="2337" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2337
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<td class="diff-line-num new_line" data-linenumber="2337" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2337
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<pre style="margin: 0;"> <span id="LC2337" class="line" lang="mosel"><span class="s1" style="color: #d14;">Homepage: http://statgen.ncsu.edu/qtlcart/</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="2338" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2338
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<td class="diff-line-num new_line" data-linenumber="2338" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2338
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<pre style="margin: 0;"> <span id="LC2338" class="line" lang="mosel"><span class="s1" style="color: #d14;">License: GPL</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="2339" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2339
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<td class="diff-line-num new_line" data-linenumber="2339" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2339
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<pre style="margin: 0;"> <span id="LC2339" class="line" lang="mosel"><span class="s1" style="color: #d14;">Responsible: BioLinux - Dan Swan <dswan@ceh.ac.uk></span></span>
</pre>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="2346" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="2346" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -2346,7 +2346,7 @@ Pkg-Description: map quantitative traits using a map of molecular markers</td>
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<td class="diff-line-num old_line" data-linenumber="2346" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2346
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<td class="diff-line-num new_line" data-linenumber="2346" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2346
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<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC2346" class="line" lang="mosel"><span class="s1" style="color: #d14;"> simulation studies of experiments.</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="2347" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2347
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<td class="diff-line-num new_line" data-linenumber="2347" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2347
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<pre style="margin: 0;"> <span id="LC2347" class="line" lang="mosel"><span class="s1" style="color: #d14;">Remark: This package ships with BioLinux http://envgen.nox.ac.uk/biolinux.html</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="2348" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2348
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<td class="diff-line-num new_line" data-linenumber="2348" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2348
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<pre style="margin: 0;"> <span id="LC2348" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="2349" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
2349
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<td class="diff-line-num new_line old" data-linenumber="2349" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC2349" class="line" lang="mosel"><span class="s1" style="color: #d14;"><span class="idiff left right">Suggest</span>s: rbs-finder</span></span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="2349" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
2349
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<pre style="margin: 0;">+<span id="LC2349" class="line" lang="mosel"><span class="s1" style="color: #d14;"><span class="idiff left right">Recommend</span>s: rbs-finder</span></span>
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2350
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<td class="diff-line-num new_line" data-linenumber="2350" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2350
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<pre style="margin: 0;"> <span id="LC2350" class="line" lang="mosel"><span class="s1" style="color: #d14;">Homepage: http://www.genomics.jhu.edu/RBSfinder/</span></span>
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<td class="diff-line-num old_line" data-linenumber="2351" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2351
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<td class="diff-line-num new_line" data-linenumber="2351" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2351
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<pre style="margin: 0;"> <span id="LC2351" class="line" lang="mosel"><span class="s1" style="color: #d14;">License: not specified</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="2352" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2352
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<td class="diff-line-num new_line" data-linenumber="2352" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2352
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<pre style="margin: 0;"> <span id="LC2352" class="line" lang="mosel"><span class="s1" style="color: #d14;">Responsible: BioLinux - Stewart Houten <shou@ceh.ac.uk></span></span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="2363" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="2363" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -2363,7 +2363,7 @@ Pkg-Description: find ribosome binding sites(RBS)</td>
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2363
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2363
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<pre style="margin: 0;"> <span id="LC2363" class="line" lang="mosel"><span class="s1" style="color: #d14;"> http://nbc11.biologie.uni-kl.de/docbook/doc_userguide_bioinformatics_server/chunk/ch01s06.html</span></span>
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<td class="diff-line-num old_line" data-linenumber="2364" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2364
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<td class="diff-line-num new_line" data-linenumber="2364" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2364
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<pre style="margin: 0;"> <span id="LC2364" class="line" lang="mosel"><span class="s1" style="color: #d14;">Remark: This package ships with BioLinux http://envgen.nox.ac.uk/biolinux.html</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="2365" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2365
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<td class="diff-line-num new_line" data-linenumber="2365" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2365
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<pre style="margin: 0;"> <span id="LC2365" class="line" lang="mosel"></span>
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<td class="diff-line-num old old_line" data-linenumber="2366" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
2366
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<td class="diff-line-num new_line old" data-linenumber="2366" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC2366" class="line" lang="mosel"><span class="s1" style="color: #d14;"><span class="idiff left right">Suggest</span>s: splitstree</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="2367" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="2366" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
2366
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<pre style="margin: 0;">+<span id="LC2366" class="line" lang="mosel"><span class="s1" style="color: #d14;"><span class="idiff left right">Recommend</span>s: splitstree</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="2367" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2367
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<td class="diff-line-num new_line" data-linenumber="2367" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2367
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<pre style="margin: 0;"> <span id="LC2367" class="line" lang="mosel"><span class="s1" style="color: #d14;">Homepage: http://www-ab.informatik.uni-tuebingen.de/software/splitstree3/welcome.html</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="2368" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2368
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<td class="diff-line-num new_line" data-linenumber="2368" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2368
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<pre style="margin: 0;"> <span id="LC2368" class="line" lang="mosel"><span class="s1" style="color: #d14;">License: to be clarified</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="2369" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2369
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<td class="diff-line-num new_line" data-linenumber="2369" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2369
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<pre style="margin: 0;"> <span id="LC2369" class="line" lang="mosel"><span class="s1" style="color: #d14;">Responsible: BioLinux - Stewart Houten <shou@ceh.ac.uk></span></span>
</pre>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="2395" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="2395" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -2395,7 +2395,7 @@ Pkg-Description: Analyzing and Visualizing Evolutionary Data</td>
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<td class="diff-line-num old_line" data-linenumber="2395" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2395
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<td class="diff-line-num new_line" data-linenumber="2395" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2395
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<pre style="margin: 0;"> <span id="LC2395" class="line" lang="mosel"><span class="n" style="color: #333;">Remark</span><span class="p">:</span> <span class="n" style="color: #333;">This</span> <span class="k" style="font-weight: 600;">package</span> <span class="n" style="color: #333;">ships</span> <span class="k" style="font-weight: 600;">with</span> <span class="n" style="color: #333;">BioLinux</span> <span class="n" style="color: #333;">http</span><span class="p">://</span><span class="n" style="color: #333;">envgen</span><span class="p">.</span><span class="n" style="color: #333;">nox</span><span class="p">.</span><span class="n" style="color: #333;">ac</span><span class="p">.</span><span class="n" style="color: #333;">uk</span><span class="p">/</span><span class="n" style="color: #333;">biolinux</span><span class="p">.</span><span class="n" style="color: #333;">html</span></span>
</pre>
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2396
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2396
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<pre style="margin: 0;"> <span id="LC2396" class="line" lang="mosel"></span>
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<td class="diff-line-num old_line" data-linenumber="2397" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2397
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<td class="diff-line-num new_line" data-linenumber="2397" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2397
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<pre style="margin: 0;"> <span id="LC2397" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="2398" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
2398
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<td class="diff-line-num new_line old" data-linenumber="2398" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC2398" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">taverna</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="2399" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="2398" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
2398
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<pre style="margin: 0;">+<span id="LC2398" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">taverna</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="2399" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2399
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<td class="diff-line-num new_line" data-linenumber="2399" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2399
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<pre style="margin: 0;"> <span id="LC2399" class="line" lang="mosel"><span class="n" style="color: #333;">Homepage</span><span class="p">:</span> <span class="n" style="color: #333;">http</span><span class="p">://</span><span class="n" style="color: #333;">taverna</span><span class="p">.</span><span class="n" style="color: #333;">sourceforge</span><span class="p">.</span><span class="n" style="color: #333;">net</span><span class="p">/</span></span>
</pre>
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2400
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2400
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<pre style="margin: 0;"> <span id="LC2400" class="line" lang="mosel"><span class="n" style="color: #333;">License</span><span class="p">:</span> <span class="n" style="color: #333;">LGPL</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="2401" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2401
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<td class="diff-line-num new_line" data-linenumber="2401" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2401
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<pre style="margin: 0;"> <span id="LC2401" class="line" lang="mosel"><span class="n" style="color: #333;">Responsible</span><span class="p">:</span> <span class="n" style="color: #333;">BioLinux</span> <span class="p">-</span> <span class="n" style="color: #333;">Bela</span> <span class="n" style="color: #333;">Tiwari</span> <span class="p"><</span><span class="n" style="color: #333;">btiwari</span><span class="p">@</span><span class="n" style="color: #333;">ceh</span><span class="p">.</span><span class="n" style="color: #333;">ac</span><span class="p">.</span><span class="n" style="color: #333;">uk</span><span class="p">></span></span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="2420" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="2420" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -2420,7 +2420,7 @@ Pkg-Description: designing and executing myGrid workflows for bioinformatics</td>
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2420
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2420
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<pre style="margin: 0;"> <span id="LC2420" class="line" lang="mosel"> <span class="n" style="color: #333;">collaboration</span> <span class="k" style="font-weight: 600;">with</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">open</span> <span class="n" style="color: #333;">source</span> <span class="n" style="color: #333;">community</span><span class="p">.</span></span>
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<td class="diff-line-num old_line" data-linenumber="2421" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2421
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<td class="diff-line-num new_line" data-linenumber="2421" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2421
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<pre style="margin: 0;"> <span id="LC2421" class="line" lang="mosel"><span class="n" style="color: #333;">Remark</span><span class="p">:</span> <span class="n" style="color: #333;">This</span> <span class="k" style="font-weight: 600;">package</span> <span class="n" style="color: #333;">ships</span> <span class="k" style="font-weight: 600;">with</span> <span class="n" style="color: #333;">BioLinux</span> <span class="n" style="color: #333;">http</span><span class="p">://</span><span class="n" style="color: #333;">envgen</span><span class="p">.</span><span class="n" style="color: #333;">nox</span><span class="p">.</span><span class="n" style="color: #333;">ac</span><span class="p">.</span><span class="n" style="color: #333;">uk</span><span class="p">/</span><span class="n" style="color: #333;">biolinux</span><span class="p">.</span><span class="n" style="color: #333;">html</span></span>
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2422
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<td class="diff-line-num new_line" data-linenumber="2422" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2422
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<pre style="margin: 0;"> <span id="LC2422" class="line" lang="mosel"></span>
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<td class="diff-line-num old old_line" data-linenumber="2423" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
2423
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<td class="diff-line-num new_line old" data-linenumber="2423" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC2423" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">taxinspector</span></span>
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<td class="diff-line-num new old_line" data-linenumber="2424" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="2423" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
2423
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<pre style="margin: 0;">+<span id="LC2423" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">taxinspector</span></span>
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<td class="diff-line-num old_line" data-linenumber="2424" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2424
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<td class="diff-line-num new_line" data-linenumber="2424" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2424
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<pre style="margin: 0;"> <span id="LC2424" class="line" lang="mosel"><span class="n" style="color: #333;">Homepage</span><span class="p">:</span> <span class="n" style="color: #333;">http</span><span class="p">://</span><span class="n" style="color: #333;">nebc</span><span class="p">.</span><span class="n" style="color: #333;">nox</span><span class="p">.</span><span class="n" style="color: #333;">ac</span><span class="p">.</span><span class="n" style="color: #333;">uk</span><span class="p">/</span><span class="n" style="color: #333;">projects</span><span class="p">/</span><span class="n" style="color: #333;">taxinspector</span><span class="p">.</span><span class="n" style="color: #333;">html</span></span>
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<td class="diff-line-num old_line" data-linenumber="2425" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2425
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<td class="diff-line-num new_line" data-linenumber="2425" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2425
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<pre style="margin: 0;"> <span id="LC2425" class="line" lang="mosel"><span class="n" style="color: #333;">License</span><span class="p">:</span> <span class="n" style="color: #333;">Artistic</span> <span class="p">+</span> <span class="n" style="color: #333;">other</span> <span class="n" style="color: #333;">free</span> <span class="n" style="color: #333;">licenses</span></span>
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<td class="diff-line-num old_line" data-linenumber="2426" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2426
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<td class="diff-line-num new_line" data-linenumber="2426" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2426
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<pre style="margin: 0;"> <span id="LC2426" class="line" lang="mosel"><span class="n" style="color: #333;">Responsible</span><span class="p">:</span> <span class="n" style="color: #333;">BioLinux</span> <span class="p">-</span> <span class="n" style="color: #333;">Tim</span> <span class="n" style="color: #333;">Booth</span> <span class="p"><</span><span class="n" style="color: #333;">tbooth</span><span class="p">@</span><span class="n" style="color: #333;">ceh</span><span class="p">.</span><span class="n" style="color: #333;">ac</span><span class="p">.</span><span class="n" style="color: #333;">uk</span><span class="p">></span></span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="2431" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="2431" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -2431,7 +2431,7 @@ Pkg-Description: browser for entries in the NCBI taxonomy</td>
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<td class="diff-line-num old_line" data-linenumber="2431" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2431
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2431
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<pre style="margin: 0;"> <span id="LC2431" class="line" lang="mosel"> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">Pedro</span><span class="p">,</span> <span class="n" style="color: #333;">but</span> <span class="n" style="color: #333;">also</span> <span class="n" style="color: #333;">has</span> <span class="n" style="color: #333;">a</span> <span class="n" style="color: #333;">standalone</span> <span class="n" style="color: #333;">mode</span><span class="p">.</span></span>
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<td class="diff-line-num old_line" data-linenumber="2432" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2432
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2432
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<pre style="margin: 0;"> <span id="LC2432" class="line" lang="mosel"><span class="n" style="color: #333;">Remark</span><span class="p">:</span> <span class="n" style="color: #333;">This</span> <span class="k" style="font-weight: 600;">package</span> <span class="n" style="color: #333;">ships</span> <span class="k" style="font-weight: 600;">with</span> <span class="n" style="color: #333;">BioLinux</span> <span class="n" style="color: #333;">http</span><span class="p">://</span><span class="n" style="color: #333;">envgen</span><span class="p">.</span><span class="n" style="color: #333;">nox</span><span class="p">.</span><span class="n" style="color: #333;">ac</span><span class="p">.</span><span class="n" style="color: #333;">uk</span><span class="p">/</span><span class="n" style="color: #333;">biolinux</span><span class="p">.</span><span class="n" style="color: #333;">html</span></span>
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<td class="diff-line-num old_line" data-linenumber="2433" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2433
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2433
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<pre style="margin: 0;"> <span id="LC2433" class="line" lang="mosel"></span>
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<td class="diff-line-num old old_line" data-linenumber="2434" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
2434
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<td class="diff-line-num new_line old" data-linenumber="2434" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC2434" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">tetra</span></span>
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<td class="diff-line-num new old_line" data-linenumber="2435" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="2434" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
2434
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<pre style="margin: 0;">+<span id="LC2434" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">tetra</span></span>
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<td class="diff-line-num old_line" data-linenumber="2435" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2435
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<td class="diff-line-num new_line" data-linenumber="2435" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2435
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<pre style="margin: 0;"> <span id="LC2435" class="line" lang="mosel"><span class="n" style="color: #333;">Homepage</span><span class="p">:</span> <span class="n" style="color: #333;">http</span><span class="p">://</span><span class="n" style="color: #333;">www</span><span class="p">.</span><span class="n" style="color: #333;">megx</span><span class="p">.</span><span class="n" style="color: #333;">net</span><span class="p">/</span><span class="n" style="color: #333;">tetra</span><span class="p">/</span></span>
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<td class="diff-line-num old_line" data-linenumber="2436" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2436
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<td class="diff-line-num new_line" data-linenumber="2436" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2436
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<pre style="margin: 0;"> <span id="LC2436" class="line" lang="mosel"><span class="n" style="color: #333;">License</span><span class="p">:</span> <span class="n" style="color: #333;">free</span> <span class="n" style="color: #333;">academic</span></span>
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<td class="diff-line-num old_line" data-linenumber="2437" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2437
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<td class="diff-line-num new_line" data-linenumber="2437" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2437
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<pre style="margin: 0;"> <span id="LC2437" class="line" lang="mosel"><span class="n" style="color: #333;">Responsible</span><span class="p">:</span> <span class="n" style="color: #333;">BioLinux</span> <span class="p">-</span> <span class="n" style="color: #333;">Stewart</span> <span class="n" style="color: #333;">Houten</span> <span class="p"><</span><span class="n" style="color: #333;">shou</span><span class="p">@</span><span class="n" style="color: #333;">ceh</span><span class="p">.</span><span class="n" style="color: #333;">ac</span><span class="p">.</span><span class="n" style="color: #333;">uk</span><span class="p">></span></span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="2449" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="2449" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -2449,16 +2449,16 @@ Remark: for the Linux version</td>
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<td class="diff-line-num old_line" data-linenumber="2449" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2449
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<td class="diff-line-num new_line" data-linenumber="2449" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2449
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<pre style="margin: 0;"> <span id="LC2449" class="line" lang="mosel"> <span class="n" style="color: #333;">Linux</span> <span class="k" style="font-weight: 600;">version</span> <span class="n" style="color: #333;">might</span> <span class="n" style="color: #333;">happen</span> <span class="n" style="color: #333;">when</span> <span class="n" style="color: #333;">REALbasic</span><span class="s1" style="color: #d14;">'s Linux IDE is more mature.</span></span>
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<td class="diff-line-num old_line" data-linenumber="2450" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2450
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<td class="diff-line-num new_line" data-linenumber="2450" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2450
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<pre style="margin: 0;"> <span id="LC2450" class="line" lang="mosel"><span class="s1" style="color: #d14;">Remark: This package ships with BioLinux http://envgen.nox.ac.uk/biolinux.html</span></span>
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2451
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2451
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<pre style="margin: 0;"> <span id="LC2451" class="line" lang="mosel"></span>
</pre>
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2452
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<td class="diff-line-num new_line old" data-linenumber="2452" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC2452" class="line" lang="mosel"><span class="s1" style="color: #d14;"><span class="idiff left right">Suggest</span>s: trace2dbest</span></span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="2452" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
2452
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<pre style="margin: 0;">+<span id="LC2452" class="line" lang="mosel"><span class="s1" style="color: #d14;"><span class="idiff left right">Recommend</span>s: trace2dbest</span></span>
</pre>
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2453
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2453
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<pre style="margin: 0;"> <span id="LC2453" class="line" lang="mosel"></span>
</pre>
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2454
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<td class="diff-line-num new_line old" data-linenumber="2454" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC2454" class="line" lang="mosel"><span class="s1" style="color: #d14;"><span class="idiff left right">Suggest</span>s: estscan</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="2455" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="2454" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
2454
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<pre style="margin: 0;">+<span id="LC2454" class="line" lang="mosel"><span class="s1" style="color: #d14;"><span class="idiff left right">Recommend</span>s: estscan</span></span>
</pre>
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2455
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2455
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<pre style="margin: 0;"> <span id="LC2455" class="line" lang="mosel"><span class="s1" style="color: #d14;">Remark: This package ships with BioLinux http://envgen.nox.ac.uk/biolinux.html</span></span>
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2456
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<td class="diff-line-num new_line" data-linenumber="2456" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2456
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<pre style="margin: 0;"> <span id="LC2456" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="2457" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
2457
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<td class="diff-line-num new_line old" data-linenumber="2457" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC2457" class="line" lang="mosel"><span class="s1" style="color: #d14;"><span class="idiff left right">Suggest</span>s: profit</span></span>
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2457
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<pre style="margin: 0;">+<span id="LC2457" class="line" lang="mosel"><span class="s1" style="color: #d14;"><span class="idiff left right">Recommend</span>s: profit</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="2458" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2458
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2458
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<pre style="margin: 0;"> <span id="LC2458" class="line" lang="mosel"><span class="s1" style="color: #d14;">WNPP: 525428</span></span>
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<td class="diff-line-num old_line" data-linenumber="2459" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2459
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<td class="diff-line-num new_line" data-linenumber="2459" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2459
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<pre style="margin: 0;"> <span id="LC2459" class="line" lang="mosel"><span class="s1" style="color: #d14;">Remark: The authors need to change the license, still.</span></span>
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<td class="diff-line-num old_line" data-linenumber="2460" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2460
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2460
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<pre style="margin: 0;"> <span id="LC2460" class="line" lang="mosel"></span>
</pre>
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2461
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<td class="diff-line-num new_line old" data-linenumber="2461" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC2461" class="line" lang="mosel"><span class="s1" style="color: #d14;"><span class="idiff left right">Suggest</span>s: obo-edit</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="2462" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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2461
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<pre style="margin: 0;">+<span id="LC2461" class="line" lang="mosel"><span class="s1" style="color: #d14;"><span class="idiff left right">Recommend</span>s: obo-edit</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="2462" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2462
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2462
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<pre style="margin: 0;"> <span id="LC2462" class="line" lang="mosel"><span class="s1" style="color: #d14;">Homepage: http://www.geneontology.org</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="2463" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2463
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2463
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<pre style="margin: 0;"> <span id="LC2463" class="line" lang="mosel"><span class="s1" style="color: #d14;">X-Comment: Find the license here [1] and [2].</span></span>
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<td class="diff-line-num old_line" data-linenumber="2464" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2464
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2464
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<pre style="margin: 0;"> <span id="LC2464" class="line" lang="mosel"><span class="s1" style="color: #d14;"> [1] http://geneontology.svn.sourceforge.net/viewvc/geneontology/java/oboedit/tags/2.2/release_resources/LICENSE?revision=4863&view=markup</span></span>
</pre>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="2470" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="2470" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -2470,7 +2470,7 @@ Pkg-Description: editor for biological ontologies</td>
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2470
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<td class="diff-line-num new_line" data-linenumber="2470" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2470
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<pre style="margin: 0;"> <span id="LC2470" class="line" lang="mosel"><span class="s1" style="color: #d14;"> and part-of relations. Amongst the databases cureated by this tool</span></span>
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<td class="diff-line-num old_line" data-linenumber="2471" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2471
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2471
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<pre style="margin: 0;"> <span id="LC2471" class="line" lang="mosel"><span class="s1" style="color: #d14;"> is the GeneOntology.</span></span>
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<td class="diff-line-num old_line" data-linenumber="2472" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2472
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2472
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<pre style="margin: 0;"> <span id="LC2472" class="line" lang="mosel"></span>
</pre>
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2473
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<td class="diff-line-num new_line old" data-linenumber="2473" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC2473" class="line" lang="mosel"><span class="s1" style="color: #d14;"><span class="idiff left right">Suggest</span>s: phagefinder</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="2474" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="2473" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
2473
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<pre style="margin: 0;">+<span id="LC2473" class="line" lang="mosel"><span class="s1" style="color: #d14;"><span class="idiff left right">Recommend</span>s: phagefinder</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="2474" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2474
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<td class="diff-line-num new_line" data-linenumber="2474" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2474
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<pre style="margin: 0;"> <span id="LC2474" class="line" lang="mosel"><span class="s1" style="color: #d14;">Homepage: http://phage-finder.sourceforge.net/</span></span>
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2475
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2475
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<pre style="margin: 0;"> <span id="LC2475" class="line" lang="mosel"><span class="s1" style="color: #d14;">License: GPL</span></span>
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2476
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2476
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<pre style="margin: 0;"> <span id="LC2476" class="line" lang="mosel"><span class="s1" style="color: #d14;">Language: Perl</span></span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="2491" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="2491" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -2491,11 +2491,11 @@ Pkg-Description: heuristic computer program to identify prophage regions within</td>
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2491
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2491
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<pre style="margin: 0;"> <span id="LC2491" class="line" lang="mosel"><span class="s1" style="color: #d14;"> will facilitate future studies on the biology and evolution of these prophages by providing</span></span>
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2492
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<td class="diff-line-num new_line" data-linenumber="2492" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2492
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<pre style="margin: 0;"> <span id="LC2492" class="line" lang="mosel"><span class="s1" style="color: #d14;"> a level of microbial genome annotation that was previously void.</span></span>
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2493
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2493
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<pre style="margin: 0;"> <span id="LC2493" class="line" lang="mosel"></span>
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<td class="diff-line-num old old_line" data-linenumber="2494" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
2494
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<td class="diff-line-num new_line old" data-linenumber="2494" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC2494" class="line" lang="mosel"><span class="s1" style="color: #d14;"><span class="idiff left right">Suggest</span>s: compclust</span></span>
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<td class="diff-line-num new new_line" data-linenumber="2494" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
2494
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<pre style="margin: 0;">+<span id="LC2494" class="line" lang="mosel"><span class="s1" style="color: #d14;"><span class="idiff left right">Recommend</span>s: compclust</span></span>
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2495
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2495
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<pre style="margin: 0;"> <span id="LC2495" class="line" lang="mosel"><span class="s1" style="color: #d14;">X-Category: Genomics; Clustering analysis (+GUI)</span></span>
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<td class="diff-line-num old_line" data-linenumber="2496" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2496
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2496
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<pre style="margin: 0;"> <span id="LC2496" class="line" lang="mosel"><span class="s1" style="color: #d14;">Pkg-URL: http://woldlab.caltech.edu/compclust/debian_install.shtml</span></span>
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2497
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2497
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<pre style="margin: 0;"> <span id="LC2497" class="line" lang="mosel"></span>
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2498
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<pre style="margin: 0;">-<span id="LC2498" class="line" lang="mosel"><span class="s1" style="color: #d14;"><span class="idiff left right">Suggest</span>s: treebuilder3d</span></span>
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2498
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<pre style="margin: 0;">+<span id="LC2498" class="line" lang="mosel"><span class="s1" style="color: #d14;"><span class="idiff left right">Recommend</span>s: treebuilder3d</span></span>
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2499
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2499
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<pre style="margin: 0;"> <span id="LC2499" class="line" lang="mosel"><span class="s1" style="color: #d14;">Homepage: http://www.bcgsc.ca/platform/bioinfo/software/treebuilder</span></span>
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2500
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2500
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<pre style="margin: 0;"> <span id="LC2500" class="line" lang="mosel"><span class="s1" style="color: #d14;">License: GPL</span></span>
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2501
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2501
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<pre style="margin: 0;"> <span id="LC2501" class="line" lang="mosel"><span class="s1" style="color: #d14;">Language: Java</span></span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="2508" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="2508" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -2508,7 +2508,7 @@ Pkg-Description: viewer of SAGE and other types of gene expression data</td>
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2508
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<td class="diff-line-num new_line" data-linenumber="2508" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2508
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<pre style="margin: 0;"> <span id="LC2508" class="line" lang="mosel"><span class="s1" style="color: #d14;"> analyzing differences in expression profiles of SAGE libraries, serves as an</span></span>
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<td class="diff-line-num old_line" data-linenumber="2509" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2509
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<td class="diff-line-num new_line" data-linenumber="2509" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2509
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<pre style="margin: 0;"> <span id="LC2509" class="line" lang="mosel"><span class="s1" style="color: #d14;"> alternative to Venn diagrams.</span></span>
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2510
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2510
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<pre style="margin: 0;"> <span id="LC2510" class="line" lang="mosel"></span>
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<td class="diff-line-num old old_line" data-linenumber="2511" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
2511
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<pre style="margin: 0;">-<span id="LC2511" class="line" lang="mosel"><span class="s1" style="color: #d14;"><span class="idiff left right">Suggest</span>s: excavator</span></span>
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<td class="diff-line-num new old_line" data-linenumber="2512" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="2511" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
2511
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<pre style="margin: 0;">+<span id="LC2511" class="line" lang="mosel"><span class="s1" style="color: #d14;"><span class="idiff left right">Recommend</span>s: excavator</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="2512" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2512
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2512
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<pre style="margin: 0;"> <span id="LC2512" class="line" lang="mosel"><span class="s1" style="color: #d14;">Homepage: http://csbl.bmb.uga.edu/downloads/excavator/</span></span>
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<td class="diff-line-num old_line" data-linenumber="2513" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2513
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2513
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<pre style="margin: 0;"> <span id="LC2513" class="line" lang="mosel"><span class="s1" style="color: #d14;">License: GPL</span></span>
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<td class="diff-line-num old_line" data-linenumber="2514" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2514
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<td class="diff-line-num new_line" data-linenumber="2514" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2514
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<pre style="margin: 0;"> <span id="LC2514" class="line" lang="mosel"><span class="s1" style="color: #d14;">Language: Java</span></span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -2531,44 +2531,44 @@ Pkg-Description: gene expression data clustering</td>
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2531
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2531
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<pre style="margin: 0;"> <span id="LC2531" class="line" lang="mosel"><span class="s1" style="color: #d14;"> * numerical comparison between different clustering results of the same data set</span></span>
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2532
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2532
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<pre style="margin: 0;"> <span id="LC2532" class="line" lang="mosel"><span class="s1" style="color: #d14;"> * runnable on command line as well as through a Java GUI</span></span>
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2533
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2533
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<pre style="margin: 0;"> <span id="LC2533" class="line" lang="mosel"></span>
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2534
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<pre style="margin: 0;">-<span id="LC2534" class="line" lang="mosel"><span class="s1" style="color: #d14;"><span class="idiff left right">Suggest</span>s: treetime</span></span>
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2534
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<pre style="margin: 0;">+<span id="LC2534" class="line" lang="mosel"><span class="s1" style="color: #d14;"><span class="idiff left right">Recommend</span>s: treetime</span></span>
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<td class="diff-line-num old_line" data-linenumber="2535" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2535
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2535
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<pre style="margin: 0;"> <span id="LC2535" class="line" lang="mosel"><span class="s1" style="color: #d14;">Homepage: http://treetime.linhi.com/</span></span>
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<td class="diff-line-num old_line" data-linenumber="2536" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2536
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2536
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<pre style="margin: 0;"> <span id="LC2536" class="line" lang="mosel"><span class="s1" style="color: #d14;">License: GPL</span></span>
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<td class="diff-line-num old_line" data-linenumber="2537" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2537
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2537
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<pre style="margin: 0;"> <span id="LC2537" class="line" lang="mosel"><span class="s1" style="color: #d14;">Pkg-Description: Bayesian sampling of phylogenetic trees from molecular data</span></span>
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<td class="diff-line-num old_line" data-linenumber="2538" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2538
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2538
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<pre style="margin: 0;"> <span id="LC2538" class="line" lang="mosel"><span class="s1" style="color: #d14;"> TreeTime is controlled by input files in nexus format and does</span></span>
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<td class="diff-line-num old_line" data-linenumber="2539" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2539
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2539
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<pre style="margin: 0;"> <span id="LC2539" class="line" lang="mosel"><span class="s1" style="color: #d14;"> bayesian sampling of phylogenetic trees from these data.</span></span>
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2540
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2540
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<pre style="margin: 0;"> <span id="LC2540" class="line" lang="mosel"></span>
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2541
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<pre style="margin: 0;">-<span id="LC2541" class="line" lang="mosel"><span class="s1" style="color: #d14;"><span class="idiff left right">Suggest</span>s: abacas</span></span>
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2541
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<pre style="margin: 0;">+<span id="LC2541" class="line" lang="mosel"><span class="s1" style="color: #d14;"><span class="idiff left right">Recommend</span>s: abacas</span></span>
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2542
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2542
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<pre style="margin: 0;"> <span id="LC2542" class="line" lang="mosel"></span>
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2543
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<pre style="margin: 0;">-<span id="LC2543" class="line" lang="mosel"><span class="s1" style="color: #d14;"><span class="idiff left right">Suggest</span>s: profnet-bval, profnet-chop, profnet-con, profnet-isis, profnet-md, profnet-norsnet, profnet-prof, profnet-snapfun</span></span>
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2543
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<pre style="margin: 0;">+<span id="LC2543" class="line" lang="mosel"><span class="s1" style="color: #d14;"><span class="idiff left right">Recommend</span>s: profnet-bval, profnet-chop, profnet-con, profnet-isis, profnet-md, profnet-norsnet, profnet-prof, profnet-snapfun</span></span>
</pre>
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2544
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2544
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<pre style="margin: 0;"> <span id="LC2544" class="line" lang="mosel"></span>
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2545
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<pre style="margin: 0;">-<span id="LC2545" class="line" lang="mosel"><span class="s1" style="color: #d14;"><span class="idiff left right">Suggest</span>s: profphd-net, profphd-utils</span></span>
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2545
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<pre style="margin: 0;">+<span id="LC2545" class="line" lang="mosel"><span class="s1" style="color: #d14;"><span class="idiff left right">Recommend</span>s: profphd-net, profphd-utils</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="2546" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2546
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2546
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<pre style="margin: 0;"> <span id="LC2546" class="line" lang="mosel"></span>
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2547
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<td class="diff-line-num new_line old" data-linenumber="2547" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC2547" class="line" lang="mosel"><span class="s1" style="color: #d14;"><span class="idiff left right">Suggest</span>s: profphd</span></span>
</pre>
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2547
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<pre style="margin: 0;">+<span id="LC2547" class="line" lang="mosel"><span class="s1" style="color: #d14;"><span class="idiff left right">Recommend</span>s: profphd</span></span>
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2548
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2548
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<pre style="margin: 0;"> <span id="LC2548" class="line" lang="mosel"></span>
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2549
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<pre style="margin: 0;">-<span id="LC2549" class="line" lang="mosel"><span class="s1" style="color: #d14;"><span class="idiff left right">Suggest</span>s: abyss</span></span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="2549" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
2549
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<pre style="margin: 0;">+<span id="LC2549" class="line" lang="mosel"><span class="s1" style="color: #d14;"><span class="idiff left right">Recommend</span>s: abyss</span></span>
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2550
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2550
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<pre style="margin: 0;"> <span id="LC2550" class="line" lang="mosel"></span>
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<td class="diff-line-num old old_line" data-linenumber="2551" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
2551
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<td class="diff-line-num new_line old" data-linenumber="2551" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC2551" class="line" lang="mosel"><span class="s1" style="color: #d14;"><span class="idiff left right">Suggest</span>s: ampliconnoise</span></span>
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<td class="diff-line-num new old_line" data-linenumber="2552" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="2551" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
2551
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<pre style="margin: 0;">+<span id="LC2551" class="line" lang="mosel"><span class="s1" style="color: #d14;"><span class="idiff left right">Recommend</span>s: ampliconnoise</span></span>
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2552
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2552
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<pre style="margin: 0;"> <span id="LC2552" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="2553" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
2553
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<td class="diff-line-num new_line old" data-linenumber="2553" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC2553" class="line" lang="mosel"><span class="s1" style="color: #d14;"><span class="idiff left right">Suggest</span>s: disulfinder</span></span>
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<td class="diff-line-num new new_line" data-linenumber="2553" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
2553
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<pre style="margin: 0;">+<span id="LC2553" class="line" lang="mosel"><span class="s1" style="color: #d14;"><span class="idiff left right">Recommend</span>s: disulfinder</span></span>
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2554
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2554
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<pre style="margin: 0;"> <span id="LC2554" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="2555" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
2555
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<td class="diff-line-num new_line old" data-linenumber="2555" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC2555" class="line" lang="mosel"><span class="s1" style="color: #d14;"><span class="idiff left right">Suggest</span>s: circos, runcircos-gui</span></span>
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<td class="diff-line-num new old_line" data-linenumber="2556" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="2555" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
2555
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<pre style="margin: 0;">+<span id="LC2555" class="line" lang="mosel"><span class="s1" style="color: #d14;"><span class="idiff left right">Recommend</span>s: circos, runcircos-gui</span></span>
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2556
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2556
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<pre style="margin: 0;"> <span id="LC2556" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="2557" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
2557
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<td class="diff-line-num new_line old" data-linenumber="2557" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC2557" class="line" lang="mosel"><span class="s1" style="color: #d14;"><span class="idiff left right">Suggest</span>s: populations</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="2558" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="2557" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
2557
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<pre style="margin: 0;">+<span id="LC2557" class="line" lang="mosel"><span class="s1" style="color: #d14;"><span class="idiff left right">Recommend</span>s: populations</span></span>
</pre>
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2558
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2558
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<pre style="margin: 0;"> <span id="LC2558" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="2559" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
2559
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<td class="diff-line-num new_line old" data-linenumber="2559" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC2559" class="line" lang="mosel"><span class="s1" style="color: #d14;"><span class="idiff left right">Suggest</span>s: raccoon</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="2560" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="2559" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
2559
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<pre style="margin: 0;">+<span id="LC2559" class="line" lang="mosel"><span class="s1" style="color: #d14;"><span class="idiff left right">Recommend</span>s: raccoon</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="2560" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2560
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<td class="diff-line-num new_line" data-linenumber="2560" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2560
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<pre style="margin: 0;"> <span id="LC2560" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="2561" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
2561
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<td class="diff-line-num new_line old" data-linenumber="2561" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC2561" class="line" lang="mosel"><span class="s1" style="color: #d14;"><span class="idiff left right">Suggest</span>s: racon, spoa, rampler</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="2562" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="2561" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
2561
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<pre style="margin: 0;">+<span id="LC2561" class="line" lang="mosel"><span class="s1" style="color: #d14;"><span class="idiff left right">Recommend</span>s: racon, spoa, rampler</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="2562" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2562
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<td class="diff-line-num new_line" data-linenumber="2562" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2562
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<pre style="margin: 0;"> <span id="LC2562" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="2563" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
2563
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<td class="diff-line-num new_line old" data-linenumber="2563" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC2563" class="line" lang="mosel"><span class="s1" style="color: #d14;"><span class="idiff left right">Suggest</span>s: librg-utils-perl</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="2564" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
</td>
<td class="diff-line-num new new_line" data-linenumber="2563" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
2563
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<pre style="margin: 0;">+<span id="LC2563" class="line" lang="mosel"><span class="s1" style="color: #d14;"><span class="idiff left right">Recommend</span>s: librg-utils-perl</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="2564" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2564
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<td class="diff-line-num new_line" data-linenumber="2564" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2564
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<pre style="margin: 0;"> <span id="LC2564" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="2565" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
2565
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<td class="diff-line-num new_line old" data-linenumber="2565" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC2565" class="line" lang="mosel"><span class="s1" style="color: #d14;"><span class="idiff left right">Suggest</span>s: snap</span></span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="2565" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
2565
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<pre style="margin: 0;">+<span id="LC2565" class="line" lang="mosel"><span class="s1" style="color: #d14;"><span class="idiff left right">Recommend</span>s: snap</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="2566" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2566
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<td class="diff-line-num new_line" data-linenumber="2566" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2566
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<pre style="margin: 0;"> <span id="LC2566" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="2567" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
2567
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<td class="diff-line-num new_line old" data-linenumber="2567" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC2567" class="line" lang="mosel"><span class="s1" style="color: #d14;"><span class="idiff left right">Suggest</span>s: pyvcf, vcftools</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="2568" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="2567" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
2567
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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC2567" class="line" lang="mosel"><span class="s1" style="color: #d14;"><span class="idiff left right">Recommend</span>s: pyvcf, vcftools</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="2568" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2568
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<td class="diff-line-num new_line" data-linenumber="2568" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2568
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<pre style="margin: 0;"> <span id="LC2568" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="2569" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
2569
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<td class="diff-line-num new_line old" data-linenumber="2569" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC2569" class="line" lang="mosel"><span class="s1" style="color: #d14;"><span class="idiff left right">Suggest</span>s: beads</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="2570" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="2569" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
2569
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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC2569" class="line" lang="mosel"><span class="s1" style="color: #d14;"><span class="idiff left right">Recommend</span>s: beads</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="2570" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2570
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<td class="diff-line-num new_line" data-linenumber="2570" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2570
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<pre style="margin: 0;"> <span id="LC2570" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="2571" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
2571
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<td class="diff-line-num new_line old" data-linenumber="2571" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC2571" class="line" lang="mosel"><span class="s1" style="color: #d14;"><span class="idiff left right">Suggest</span>s: x-tandem-pipeline</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="2572" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="2571" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
2571
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<pre style="margin: 0;">+<span id="LC2571" class="line" lang="mosel"><span class="s1" style="color: #d14;"><span class="idiff left right">Recommend</span>s: x-tandem-pipeline</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="2572" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2572
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<td class="diff-line-num new_line" data-linenumber="2572" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2572
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<pre style="margin: 0;"> <span id="LC2572" class="line" lang="mosel"><span class="s1" style="color: #d14;">Homepage: http://pappso.inra.fr/bioinfo/xtandempipeline/</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="2573" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2573
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<td class="diff-line-num new_line" data-linenumber="2573" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2573
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<pre style="margin: 0;"> <span id="LC2573" class="line" lang="mosel"><span class="s1" style="color: #d14;">License: GPL</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="2574" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2574
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<td class="diff-line-num new_line" data-linenumber="2574" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2574
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<pre style="margin: 0;"> <span id="LC2574" class="line" lang="mosel"><span class="s1" style="color: #d14;">Language: Java</span></span>
</pre>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="2593" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="2593" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -2593,7 +2593,7 @@ Pkg-Description: peptide/protein identification from MS/MS mass spectra</td>
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<td class="diff-line-num old_line" data-linenumber="2593" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2593
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2593
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<pre style="margin: 0;"> <span id="LC2593" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="2594" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2594
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<td class="diff-line-num new_line" data-linenumber="2594" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2594
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<pre style="margin: 0;"> <span id="LC2594" class="line" lang="mosel"><span class="s1" style="color: #d14;">Suggests: maude</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="2595" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2595
</td>
<td class="diff-line-num new_line" data-linenumber="2595" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2595
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<pre style="margin: 0;"> <span id="LC2595" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="2596" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
2596
</td>
<td class="diff-line-num new_line old" data-linenumber="2596" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC2596" class="line" lang="mosel"><span class="s1" style="color: #d14;"><span class="idiff left right">Suggest</span>s: forge</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="2597" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="2596" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
2596
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<pre style="margin: 0;">+<span id="LC2596" class="line" lang="mosel"><span class="s1" style="color: #d14;"><span class="idiff left right">Recommend</span>s: forge</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="2597" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2597
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<td class="diff-line-num new_line" data-linenumber="2597" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2597
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<pre style="margin: 0;"> <span id="LC2597" class="line" lang="mosel"><span class="s1" style="color: #d14;">Homepage: http://combiol.org/forge/</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="2598" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2598
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<td class="diff-line-num new_line" data-linenumber="2598" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2598
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<pre style="margin: 0;"> <span id="LC2598" class="line" lang="mosel"><span class="s1" style="color: #d14;">License: Apache 2.0</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="2599" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2599
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<td class="diff-line-num new_line" data-linenumber="2599" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2599
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<pre style="margin: 0;"> <span id="LC2599" class="line" lang="mosel"><span class="s1" style="color: #d14;">Pkg-Description: genome assembler for mixed read types</span></span>
</pre>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="2617" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="2617" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -2617,7 +2617,7 @@ Remark: Competitor to MIRA2 and wgs-assembler</td>
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<td class="diff-line-num old_line" data-linenumber="2617" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2617
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<td class="diff-line-num new_line" data-linenumber="2617" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2617
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<pre style="margin: 0;"> <span id="LC2617" class="line" lang="mosel"><span class="s1" style="color: #d14;"> This package was requested by William Spooner <whs@eaglegenomics.com> as</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="2618" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2618
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<td class="diff-line-num new_line" data-linenumber="2618" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2618
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<pre style="margin: 0;"> <span id="LC2618" class="line" lang="mosel"><span class="s1" style="color: #d14;"> a competitor to MIRA2 and wgs-assembler.</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="2619" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2619
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2619
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<pre style="margin: 0;"> <span id="LC2619" class="line" lang="mosel"></span>
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2620
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<pre style="margin: 0;">-<span id="LC2620" class="line" lang="mosel"><span class="s1" style="color: #d14;"><span class="idiff left right">Suggest</span>s: metarep</span></span>
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2620
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<pre style="margin: 0;">+<span id="LC2620" class="line" lang="mosel"><span class="s1" style="color: #d14;"><span class="idiff left right">Recommend</span>s: metarep</span></span>
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2621
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2621
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<pre style="margin: 0;"> <span id="LC2621" class="line" lang="mosel"><span class="s1" style="color: #d14;">License: MIT</span></span>
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<td class="diff-line-num old_line" data-linenumber="2622" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2622
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2622
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<pre style="margin: 0;"> <span id="LC2622" class="line" lang="mosel"><span class="s1" style="color: #d14;">Homepage: http://www.jcvi.org/metarep/</span></span>
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<td class="diff-line-num old_line" data-linenumber="2623" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2623
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2623
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<pre style="margin: 0;"> <span id="LC2623" class="line" lang="mosel"><span class="s1" style="color: #d14;">Pkg-Description: JCVI Metagenomics Reports</span></span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="2650" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="2650" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -2650,7 +2650,7 @@ X-Pkg-Description: MEtaGenome ANalyzer</td>
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2650
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2650
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<pre style="margin: 0;"> <span id="LC2650" class="line" lang="mosel"> <span class="n" style="color: #333;">projects</span><span class="p">.</span> <span class="k" style="font-weight: 600;">In</span> <span class="n" style="color: #333;">consequence</span><span class="p">,</span> <span class="n" style="color: #333;">there</span> <span class="n" style="color: #333;">is</span> <span class="n" style="color: #333;">a</span> <span class="n" style="color: #333;">dramatic</span> <span class="n" style="color: #333;">increase</span> <span class="k" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">volume</span> <span class="k" style="font-weight: 600;">of</span></span>
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<td class="diff-line-num old_line" data-linenumber="2651" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2651
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2651
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<pre style="margin: 0;"> <span id="LC2651" class="line" lang="mosel"> <span class="n" style="color: #333;">sequence</span> <span class="n" style="color: #333;">data</span> <span class="k" style="font-weight: 600;">to</span> <span class="n" style="color: #333;">be</span> <span class="n" style="color: #333;">analyzed</span><span class="p">.</span></span>
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2652
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2652
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<pre style="margin: 0;"> <span id="LC2652" class="line" lang="mosel"></span>
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<td class="diff-line-num old old_line" data-linenumber="2653" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
2653
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<td class="diff-line-num new_line old" data-linenumber="2653" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC2653" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">arachne</span></span>
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2653
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<pre style="margin: 0;">+<span id="LC2653" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">arachne</span></span>
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2654
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2654
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<pre style="margin: 0;"> <span id="LC2654" class="line" lang="mosel"><span class="n" style="color: #333;">Homepage</span><span class="p">:</span> <span class="n" style="color: #333;">http</span><span class="p">://</span><span class="n" style="color: #333;">www</span><span class="p">.</span><span class="n" style="color: #333;">broadinstitute</span><span class="p">.</span><span class="n" style="color: #333;">org</span><span class="p">/</span><span class="n" style="color: #333;">crd</span><span class="p">/</span><span class="n" style="color: #333;">wiki</span><span class="p">/</span><span class="n" style="color: #333;">index</span><span class="p">.</span><span class="n" style="color: #333;">php</span><span class="p">/</span><span class="n" style="color: #333;">Arachne</span></span>
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<td class="diff-line-num old_line" data-linenumber="2655" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2655
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2655
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<pre style="margin: 0;"> <span id="LC2655" class="line" lang="mosel"><span class="n" style="color: #333;">License</span><span class="p">:</span> <span class="n" style="color: #333;">free</span></span>
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<td class="diff-line-num old_line" data-linenumber="2656" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2656
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2656
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<pre style="margin: 0;"> <span id="LC2656" class="line" lang="mosel"><span class="n" style="color: #333;">Pkg</span><span class="p">-</span><span class="n" style="color: #333;">Description</span><span class="p">:</span> <span class="n" style="color: #333;">toolkit</span> <span class="n" style="color: #333;">for</span> <span class="n" style="color: #333;">Whole</span> <span class="n" style="color: #333;">Genome</span> <span class="n" style="color: #333;">Shotgun</span> <span class="n" style="color: #333;">Assembly</span></span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="2669" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="2669" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -2669,7 +2669,7 @@ Pkg-Description: toolkit for Whole Genome Shotgun Assembly</td>
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2669
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2669
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<pre style="margin: 0;"> <span id="LC2669" class="line" lang="mosel"><span class="s1" style="color: #d14;"> numerous modules, to analyze, visualize and manipulate assemblies. New</span></span>
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<td class="diff-line-num old_line" data-linenumber="2670" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2670
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2670
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<pre style="margin: 0;"> <span id="LC2670" class="line" lang="mosel"><span class="s1" style="color: #d14;"> and improved algorithms are becoming available on a regular basis.</span></span>
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2671
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2671
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<pre style="margin: 0;"> <span id="LC2671" class="line" lang="mosel"></span>
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2672
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<pre style="margin: 0;">-<span id="LC2672" class="line" lang="mosel"><span class="s1" style="color: #d14;"><span class="idiff left right">Suggest</span>s: maker2</span></span>
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2672
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<pre style="margin: 0;">+<span id="LC2672" class="line" lang="mosel"><span class="s1" style="color: #d14;"><span class="idiff left right">Recommend</span>s: maker2</span></span>
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2673
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2673
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<pre style="margin: 0;"> <span id="LC2673" class="line" lang="mosel"><span class="s1" style="color: #d14;">Homepage: http://www.yandell-lab.org/software/maker.html</span></span>
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<td class="diff-line-num old_line" data-linenumber="2674" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2674
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2674
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<pre style="margin: 0;"> <span id="LC2674" class="line" lang="mosel"><span class="s1" style="color: #d14;">License: GPL / Artistic</span></span>
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2675
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2675
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<pre style="margin: 0;"> <span id="LC2675" class="line" lang="mosel"><span class="s1" style="color: #d14;">Pkg-Description: annotate genomes and create genome databases</span></span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="2689" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="2689" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -2689,7 +2689,7 @@ Pkg-Description: annotate genomes and create genome databases</td>
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2689
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2689
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<pre style="margin: 0;"> <span id="LC2689" class="line" lang="mosel"><span class="s1" style="color: #d14;"> especially useful for emerging model organism projects with minimal</span></span>
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2690
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2690
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<pre style="margin: 0;"> <span id="LC2690" class="line" lang="mosel"><span class="s1" style="color: #d14;"> bioinformatics expertise and computer resources</span></span>
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2691
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2691
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<pre style="margin: 0;"> <span id="LC2691" class="line" lang="mosel"></span>
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2692
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<td class="diff-line-num new_line old" data-linenumber="2692" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC2692" class="line" lang="mosel"><span class="s1" style="color: #d14;"><span class="idiff left right">Suggest</span>s: rmblast</span></span>
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2692
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<pre style="margin: 0;">+<span id="LC2692" class="line" lang="mosel"><span class="s1" style="color: #d14;"><span class="idiff left right">Recommend</span>s: rmblast</span></span>
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<td class="diff-line-num old_line" data-linenumber="2693" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2693
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2693
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<pre style="margin: 0;"> <span id="LC2693" class="line" lang="mosel"><span class="s1" style="color: #d14;">Homepage: http://tandem.bu.edu/trf/trf.html</span></span>
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<td class="diff-line-num old_line" data-linenumber="2694" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2694
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2694
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<pre style="margin: 0;"> <span id="LC2694" class="line" lang="mosel"><span class="s1" style="color: #d14;">License: Same as blast2</span></span>
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2695
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2695
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<pre style="margin: 0;"> <span id="LC2695" class="line" lang="mosel"><span class="s1" style="color: #d14;">Pkg-Description: RepeatMasker compatible version of the standard NCBI BLAST</span></span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="2703" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="2703" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -2703,7 +2703,7 @@ Pkg-Description: RepeatMasker compatible version of the standard NCBI BLAST</td>
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2703
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2703
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<pre style="margin: 0;"> <span id="LC2703" class="line" lang="mosel"><span class="s1" style="color: #d14;"> scoring. Cross_match is Phil Green'</span><span class="n" style="color: #333;">s</span> <span class="n" style="color: #333;">seeded</span> <span class="n" style="color: #333;">smith</span><span class="p">-</span><span class="n" style="color: #333;">waterman</span> <span class="n" style="color: #333;">search</span> <span class="n" style="color: #333;">algorithm</span><span class="p">.</span></span>
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2704
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2704
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<pre style="margin: 0;"> <span id="LC2704" class="line" lang="mosel"> <span class="n" style="color: #333;">Support</span> <span class="n" style="color: #333;">for</span> <span class="n" style="color: #333;">cross_match</span><span class="p">-</span><span class="n" style="color: #333;">like</span> <span class="n" style="color: #333;">masklevel</span> <span class="n" style="color: #333;">filtering</span><span class="p">.</span></span>
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2705
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2705
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<pre style="margin: 0;"> <span id="LC2705" class="line" lang="mosel"></span>
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2706
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<pre style="margin: 0;">-<span id="LC2706" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">e</span><span class="p">-</span><span class="n" style="color: #333;">hive</span></span>
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2706
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<pre style="margin: 0;">+<span id="LC2706" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">e</span><span class="p">-</span><span class="n" style="color: #333;">hive</span></span>
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2707
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2707
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<pre style="margin: 0;"> <span id="LC2707" class="line" lang="mosel"><span class="n" style="color: #333;">Homepage</span><span class="p">:</span> <span class="n" style="color: #333;">http</span><span class="p">://</span><span class="n" style="color: #333;">www</span><span class="p">.</span><span class="n" style="color: #333;">ensembl</span><span class="p">.</span><span class="n" style="color: #333;">org</span><span class="p">/</span><span class="n" style="color: #333;">info</span><span class="p">/</span><span class="n" style="color: #333;">docs</span><span class="p">/</span><span class="n" style="color: #333;">eHive</span><span class="p">/</span><span class="n" style="color: #333;">index</span><span class="p">.</span><span class="n" style="color: #333;">html</span></span>
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2708
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2708
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<pre style="margin: 0;"> <span id="LC2708" class="line" lang="mosel"><span class="n" style="color: #333;">License</span><span class="p">:</span> <span class="k" style="font-weight: 600;">Not</span> <span class="n" style="color: #333;">specified</span></span>
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<td class="diff-line-num old_line" data-linenumber="2709" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2709
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2709
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<pre style="margin: 0;"> <span id="LC2709" class="line" lang="mosel"><span class="n" style="color: #333;">Pkg</span><span class="p">-</span><span class="n" style="color: #333;">Description</span><span class="p">:</span> <span class="n" style="color: #333;">distributed</span> <span class="n" style="color: #333;">processing</span> <span class="nf" style="color: #900; font-weight: 600;">system</span> <span class="n" style="color: #333;">based</span> <span class="n" style="color: #333;">on</span> <span class="s1" style="color: #d14;">'autonomous agents'</span></span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="2713" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="2713" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -2713,14 +2713,14 @@ Pkg-Description: distributed processing system based on 'autonomous agents'</td>
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2713
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2713
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<pre style="margin: 0;"> <span id="LC2713" class="line" lang="mosel"> <span class="k" style="font-weight: 600;">to</span> <span class="n" style="color: #333;">codify</span> <span class="n" style="color: #333;">any</span> <span class="n" style="color: #333;">program</span><span class="p">,</span> <span class="n" style="color: #333;">algorithm</span><span class="p">,</span> <span class="k" style="font-weight: 600;">or</span> <span class="n" style="color: #333;">parallel</span> <span class="n" style="color: #333;">processing</span> <span class="n" style="color: #333;">job</span> <span class="n" style="color: #333;">control</span> <span class="nf" style="color: #900; font-weight: 600;">system</span><span class="p">.</span></span>
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<td class="diff-line-num old_line" data-linenumber="2714" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2714
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2714
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<pre style="margin: 0;"> <span id="LC2714" class="line" lang="mosel"> <span class="n" style="color: #333;">It</span> <span class="n" style="color: #333;">is</span> <span class="k" style="font-weight: 600;">not</span> <span class="n" style="color: #333;">bound</span> <span class="k" style="font-weight: 600;">to</span> <span class="n" style="color: #333;">any</span> <span class="n" style="color: #333;">processing</span> <span class="s1" style="color: #d14;">'farm'</span> <span class="nf" style="color: #900; font-weight: 600;">system</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">can</span> <span class="n" style="color: #333;">be</span> <span class="n" style="color: #333;">adapted</span> <span class="k" style="font-weight: 600;">to</span> <span class="n" style="color: #333;">any</span> <span class="n" style="color: #333;">GRID</span><span class="p">.</span></span>
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2715
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2715
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<pre style="margin: 0;"> <span id="LC2715" class="line" lang="mosel"></span>
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2716
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<td class="diff-line-num new_line old" data-linenumber="2716" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC2716" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">cmap</span></span>
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2716
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<pre style="margin: 0;">+<span id="LC2716" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">cmap</span></span>
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2717
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<td class="diff-line-num new_line" data-linenumber="2717" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2717
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<pre style="margin: 0;"> <span id="LC2717" class="line" lang="mosel"><span class="n" style="color: #333;">Homepage</span><span class="p">:</span> <span class="n" style="color: #333;">http</span><span class="p">://</span><span class="n" style="color: #333;">gmod</span><span class="p">.</span><span class="n" style="color: #333;">org</span><span class="p">/</span><span class="n" style="color: #333;">wiki</span><span class="p">/</span><span class="n" style="color: #333;">CMap</span></span>
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<td class="diff-line-num old_line" data-linenumber="2718" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2718
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<td class="diff-line-num new_line" data-linenumber="2718" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2718
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<pre style="margin: 0;"> <span id="LC2718" class="line" lang="mosel"><span class="n" style="color: #333;">License</span><span class="p">:</span> <span class="k" style="font-weight: 600;">Not</span> <span class="n" style="color: #333;">specified</span></span>
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<td class="diff-line-num old_line" data-linenumber="2719" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2719
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<td class="diff-line-num new_line" data-linenumber="2719" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2719
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<pre style="margin: 0;"> <span id="LC2719" class="line" lang="mosel"><span class="n" style="color: #333;">Pkg</span><span class="p">-</span><span class="n" style="color: #333;">Description</span><span class="p">:</span> <span class="n" style="color: #333;">view</span> <span class="n" style="color: #333;">comparisons</span> <span class="k" style="font-weight: 600;">of</span> <span class="n" style="color: #333;">genetic</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">physical</span> <span class="n" style="color: #333;">maps</span></span>
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<td class="diff-line-num old_line" data-linenumber="2720" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2720
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<td class="diff-line-num new_line" data-linenumber="2720" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2720
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<pre style="margin: 0;"> <span id="LC2720" class="line" lang="mosel"> <span class="n" style="color: #333;">CMap</span> <span class="n" style="color: #333;">is</span> <span class="n" style="color: #333;">a</span> <span class="n" style="color: #333;">web</span><span class="p">-</span><span class="n" style="color: #333;">based</span> <span class="n" style="color: #333;">tool</span> <span class="n" style="color: #333;">that</span> <span class="n" style="color: #333;">allows</span> <span class="n" style="color: #333;">users</span> <span class="k" style="font-weight: 600;">to</span> <span class="n" style="color: #333;">view</span> <span class="n" style="color: #333;">comparisons</span> <span class="k" style="font-weight: 600;">of</span> <span class="n" style="color: #333;">genetic</span> <span class="k" style="font-weight: 600;">and</span></span>
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<td class="diff-line-num old_line" data-linenumber="2721" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2721
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<td class="diff-line-num new_line" data-linenumber="2721" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2721
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<pre style="margin: 0;"> <span id="LC2721" class="line" lang="mosel"> <span class="n" style="color: #333;">physical</span> <span class="n" style="color: #333;">maps</span><span class="p">.</span> <span class="n" style="color: #333;">The</span> <span class="k" style="font-weight: 600;">package</span> <span class="n" style="color: #333;">also</span> <span class="n" style="color: #333;">includes</span> <span class="n" style="color: #333;">tools</span> <span class="n" style="color: #333;">for</span> <span class="n" style="color: #333;">curating</span> <span class="n" style="color: #333;">map</span> <span class="n" style="color: #333;">data</span><span class="p">.</span></span>
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<td class="diff-line-num old_line" data-linenumber="2722" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2722
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2722
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<pre style="margin: 0;"> <span id="LC2722" class="line" lang="mosel"></span>
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2723
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<td class="diff-line-num new_line old" data-linenumber="2723" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC2723" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">gbrowse</span><span class="p">-</span><span class="n" style="color: #333;">syn</span></span>
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<td class="diff-line-num new old_line" data-linenumber="2724" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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2723
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<pre style="margin: 0;">+<span id="LC2723" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">gbrowse</span><span class="p">-</span><span class="n" style="color: #333;">syn</span></span>
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2724
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2724
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<pre style="margin: 0;"> <span id="LC2724" class="line" lang="mosel"><span class="n" style="color: #333;">Homepage</span><span class="p">:</span> <span class="n" style="color: #333;">http</span><span class="p">://</span><span class="n" style="color: #333;">gmod</span><span class="p">.</span><span class="n" style="color: #333;">org</span><span class="p">/</span><span class="n" style="color: #333;">wiki</span><span class="p">/</span><span class="n" style="color: #333;">GBrowse_syn</span></span>
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<td class="diff-line-num old_line" data-linenumber="2725" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2725
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<td class="diff-line-num new_line" data-linenumber="2725" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2725
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<pre style="margin: 0;"> <span id="LC2725" class="line" lang="mosel"><span class="n" style="color: #333;">License</span><span class="p">:</span> <span class="k" style="font-weight: 600;">Not</span> <span class="n" style="color: #333;">specified</span></span>
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<td class="diff-line-num old_line" data-linenumber="2726" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2726
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<td class="diff-line-num new_line" data-linenumber="2726" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2726
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<pre style="margin: 0;"> <span id="LC2726" class="line" lang="mosel"><span class="n" style="color: #333;">Pkg</span><span class="p">-</span><span class="n" style="color: #333;">Description</span><span class="p">:</span> <span class="n" style="color: #333;">Generic</span> <span class="n" style="color: #333;">Synteny</span> <span class="n" style="color: #333;">Browser</span></span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="2733" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="2733" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -2733,7 +2733,7 @@ Pkg-Description: Generic Synteny Browser</td>
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<td class="diff-line-num old_line" data-linenumber="2733" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2733
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<td class="diff-line-num new_line" data-linenumber="2733" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2733
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<pre style="margin: 0;"> <span id="LC2733" class="line" lang="mosel"> <span class="n" style="color: #333;">later</span><span class="p">).</span> <span class="n" style="color: #333;">Working</span> <span class="n" style="color: #333;">examples</span> <span class="n" style="color: #333;">can</span> <span class="n" style="color: #333;">be</span> <span class="n" style="color: #333;">seen</span> <span class="n" style="color: #333;">at</span> <span class="n" style="color: #333;">TAIR</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">WormBase</span><span class="p">.</span></span>
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2734
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2734
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<pre style="margin: 0;"> <span id="LC2734" class="line" lang="mosel"></span>
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2735
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2735
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<pre style="margin: 0;"> <span id="LC2735" class="line" lang="mosel"></span>
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<td class="diff-line-num old old_line" data-linenumber="2736" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
2736
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<td class="diff-line-num new_line old" data-linenumber="2736" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC2736" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">tripal</span></span>
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<td class="diff-line-num new old_line" data-linenumber="2737" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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2736
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<pre style="margin: 0;">+<span id="LC2736" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">tripal</span></span>
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2737
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2737
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<pre style="margin: 0;"> <span id="LC2737" class="line" lang="mosel"><span class="n" style="color: #333;">Homepage</span><span class="p">:</span> <span class="n" style="color: #333;">http</span><span class="p">://</span><span class="n" style="color: #333;">tripal</span><span class="p">.</span><span class="n" style="color: #333;">info</span><span class="p">/</span></span>
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2738
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<td class="diff-line-num new_line" data-linenumber="2738" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2738
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<pre style="margin: 0;"> <span id="LC2738" class="line" lang="mosel"><span class="n" style="color: #333;">License</span><span class="p">:</span> <span class="n" style="color: #333;">GPL</span> <span class="p">(</span> <span class="k" style="font-weight: 600;">as</span> <span class="n" style="color: #333;">Drupal</span> <span class="n" style="color: #333;">a</span> <span class="n" style="color: #333;">derivative</span> <span class="p">)</span></span>
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<td class="diff-line-num old_line" data-linenumber="2739" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2739
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<td class="diff-line-num new_line" data-linenumber="2739" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2739
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<pre style="margin: 0;"> <span id="LC2739" class="line" lang="mosel"><span class="n" style="color: #333;">Pkg</span><span class="p">-</span><span class="n" style="color: #333;">Description</span><span class="p">:</span> <span class="n" style="color: #333;">collection</span> <span class="k" style="font-weight: 600;">of</span> <span class="n" style="color: #333;">Drupal</span> <span class="n" style="color: #333;">modules</span> <span class="n" style="color: #333;">for</span> <span class="n" style="color: #333;">genomic</span> <span class="n" style="color: #333;">research</span></span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="2748" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="2748" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -2748,14 +2748,14 @@ Pkg-Description: collection of Drupal modules for genomic research</td>
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2748
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<td class="diff-line-num new_line" data-linenumber="2748" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2748
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<pre style="margin: 0;"> <span id="LC2748" class="line" lang="mosel"> <span class="n" style="color: #333;">databases</span> <span class="n" style="color: #333;">are</span> <span class="n" style="color: #333;">projects</span> <span class="k" style="font-weight: 600;">of</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">Main</span> <span class="n" style="color: #333;">Bioinformatics</span> <span class="n" style="color: #333;">Laboratory</span> <span class="n" style="color: #333;">at</span> <span class="n" style="color: #333;">Washington</span></span>
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<td class="diff-line-num old_line" data-linenumber="2749" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2749
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2749
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<pre style="margin: 0;"> <span id="LC2749" class="line" lang="mosel"> <span class="n" style="color: #333;">State</span> <span class="n" style="color: #333;">University</span></span>
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<td class="diff-line-num old_line" data-linenumber="2750" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2750
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<td class="diff-line-num new_line" data-linenumber="2750" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2750
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<pre style="margin: 0;"> <span id="LC2750" class="line" lang="mosel"></span>
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<td class="diff-line-num old old_line" data-linenumber="2751" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
2751
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<td class="diff-line-num new_line old" data-linenumber="2751" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC2751" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">genemark</span></span>
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<td class="diff-line-num new old_line" data-linenumber="2752" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="2751" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
2751
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<pre style="margin: 0;">+<span id="LC2751" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">genemark</span></span>
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<td class="diff-line-num old_line" data-linenumber="2752" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2752
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<td class="diff-line-num new_line" data-linenumber="2752" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2752
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<pre style="margin: 0;"> <span id="LC2752" class="line" lang="mosel"><span class="n" style="color: #333;">Homepage</span><span class="p">:</span> <span class="n" style="color: #333;">http</span><span class="p">://</span><span class="n" style="color: #333;">exon</span><span class="p">.</span><span class="n" style="color: #333;">biology</span><span class="p">.</span><span class="n" style="color: #333;">gatech</span><span class="p">.</span><span class="n" style="color: #333;">edu</span><span class="p">/</span></span>
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<td class="diff-line-num old_line" data-linenumber="2753" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2753
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<td class="diff-line-num new_line" data-linenumber="2753" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2753
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<pre style="margin: 0;"> <span id="LC2753" class="line" lang="mosel"><span class="n" style="color: #333;">License</span><span class="p">:</span> <span class="n" style="color: #333;">Academic</span> <span class="n" style="color: #333;">License</span> <span class="n" style="color: #333;">Agreement</span></span>
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<td class="diff-line-num old_line" data-linenumber="2754" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2754
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<td class="diff-line-num new_line" data-linenumber="2754" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2754
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<pre style="margin: 0;"> <span id="LC2754" class="line" lang="mosel"><span class="n" style="color: #333;">Pkg</span><span class="p">-</span><span class="n" style="color: #333;">Description</span><span class="p">:</span> <span class="n" style="color: #333;">family</span> <span class="k" style="font-weight: 600;">of</span> <span class="n" style="color: #333;">gene</span> <span class="n" style="color: #333;">prediction</span> <span class="n" style="color: #333;">programs</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="2755" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2755
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<td class="diff-line-num new_line" data-linenumber="2755" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2755
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<pre style="margin: 0;"> <span id="LC2755" class="line" lang="mosel"> <span class="n" style="color: #333;">A</span> <span class="n" style="color: #333;">family</span> <span class="k" style="font-weight: 600;">of</span> <span class="n" style="color: #333;">gene</span> <span class="n" style="color: #333;">prediction</span> <span class="n" style="color: #333;">programs</span> <span class="n" style="color: #333;">developed</span> <span class="n" style="color: #333;">at</span> <span class="n" style="color: #333;">Georgia</span> <span class="n" style="color: #333;">Institute</span> <span class="k" style="font-weight: 600;">of</span></span>
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<td class="diff-line-num old_line" data-linenumber="2756" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2756
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<td class="diff-line-num new_line" data-linenumber="2756" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2756
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<pre style="margin: 0;"> <span id="LC2756" class="line" lang="mosel"> <span class="n" style="color: #333;">Technology</span><span class="p">,</span> <span class="n" style="color: #333;">Atlanta</span><span class="p">,</span> <span class="n" style="color: #333;">Georgia</span><span class="p">,</span> <span class="n" style="color: #333;">USA</span><span class="p">.</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="2757" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2757
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<td class="diff-line-num new_line" data-linenumber="2757" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2757
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<pre style="margin: 0;"> <span id="LC2757" class="line" lang="mosel"></span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="2758" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
2758
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<td class="diff-line-num new_line old" data-linenumber="2758" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC2758" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">annovar</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="2759" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="2758" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
2758
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<pre style="margin: 0;">+<span id="LC2758" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">annovar</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="2759" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2759
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<td class="diff-line-num new_line" data-linenumber="2759" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2759
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<pre style="margin: 0;"> <span id="LC2759" class="line" lang="mosel"><span class="n" style="color: #333;">Homepage</span><span class="p">:</span> <span class="n" style="color: #333;">http</span><span class="p">://</span><span class="n" style="color: #333;">www</span><span class="p">.</span><span class="n" style="color: #333;">openbioinformatics</span><span class="p">.</span><span class="n" style="color: #333;">org</span><span class="p">/</span><span class="n" style="color: #333;">annovar</span><span class="p">/</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="2760" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2760
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<td class="diff-line-num new_line" data-linenumber="2760" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2760
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<pre style="margin: 0;"> <span id="LC2760" class="line" lang="mosel"><span class="n" style="color: #333;">License</span><span class="p">:</span> <span class="n" style="color: #333;">Open</span> <span class="n" style="color: #333;">Source</span> <span class="n" style="color: #333;">for</span> <span class="n" style="color: #333;">non</span><span class="p">-</span><span class="n" style="color: #333;">profit</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="2761" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2761
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<td class="diff-line-num new_line" data-linenumber="2761" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2761
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<pre style="margin: 0;"> <span id="LC2761" class="line" lang="mosel"><span class="n" style="color: #333;">Pkg</span><span class="p">-</span><span class="n" style="color: #333;">Description</span><span class="p">:</span> <span class="n" style="color: #333;">annotate</span> <span class="n" style="color: #333;">genetic</span> <span class="n" style="color: #333;">variants</span> <span class="n" style="color: #333;">detected</span> <span class="k" style="font-weight: 600;">from</span> <span class="n" style="color: #333;">diverse</span> <span class="n" style="color: #333;">genomes</span></span>
</pre>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="2791" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="2791" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -2791,7 +2791,7 @@ Pkg-Description: annotate genetic variants detected from diverse genomes</td>
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<td class="diff-line-num old_line" data-linenumber="2791" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2791
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2791
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<pre style="margin: 0;"> <span id="LC2791" class="line" lang="mosel"> <span class="s2" style="color: #d14;">"variants reduction"</span> <span class="k" style="font-weight: 600;">procedure</span><span class="p">,</span> <span class="n" style="color: #333;">making</span> <span class="n" style="color: #333;">it</span> <span class="n" style="color: #333;">practical</span> <span class="k" style="font-weight: 600;">to</span> <span class="n" style="color: #333;">handle</span> <span class="n" style="color: #333;">hundreds</span></span>
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2792
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2792
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<pre style="margin: 0;"> <span id="LC2792" class="line" lang="mosel"> <span class="k" style="font-weight: 600;">of</span> <span class="n" style="color: #333;">human</span> <span class="n" style="color: #333;">genomes</span> <span class="k" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">a</span> <span class="n" style="color: #333;">day</span><span class="p">.</span></span>
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<td class="diff-line-num old_line" data-linenumber="2793" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2793
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2793
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<pre style="margin: 0;"> <span id="LC2793" class="line" lang="mosel"></span>
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<td class="diff-line-num old old_line" data-linenumber="2794" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
2794
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<td class="diff-line-num new_line old" data-linenumber="2794" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC2794" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">python3</span><span class="p">-</span><span class="n" style="color: #333;">orange</span></span>
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<td class="diff-line-num new old_line" data-linenumber="2795" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="2794" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
2794
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<pre style="margin: 0;">+<span id="LC2794" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">python3</span><span class="p">-</span><span class="n" style="color: #333;">orange</span></span>
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2795
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<td class="diff-line-num new_line" data-linenumber="2795" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2795
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<pre style="margin: 0;"> <span id="LC2795" class="line" lang="mosel"><span class="n" style="color: #333;">License</span><span class="p">:</span> <span class="n" style="color: #333;">GPLv3</span></span>
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<td class="diff-line-num old_line" data-linenumber="2796" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2796
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<td class="diff-line-num new_line" data-linenumber="2796" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2796
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<pre style="margin: 0;"> <span id="LC2796" class="line" lang="mosel"><span class="n" style="color: #333;">Homepage</span><span class="p">:</span> <span class="n" style="color: #333;">http</span><span class="p">://</span><span class="n" style="color: #333;">orange</span><span class="p">.</span><span class="n" style="color: #333;">biolab</span><span class="p">.</span><span class="n" style="color: #333;">si</span><span class="p">/</span></span>
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2797
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2797
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<pre style="margin: 0;"> <span id="LC2797" class="line" lang="mosel"><span class="n" style="color: #333;">Pkg</span><span class="p">-</span><span class="n" style="color: #333;">URL</span><span class="p">:</span> <span class="n" style="color: #333;">http</span><span class="p">://</span><span class="n" style="color: #333;">orange</span><span class="p">.</span><span class="n" style="color: #333;">biolab</span><span class="p">.</span><span class="n" style="color: #333;">si</span><span class="p">/</span><span class="n" style="color: #333;">debian</span><span class="p">/</span></span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="2802" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="2802" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -2802,7 +2802,7 @@ Pkg-Description: Data mining framework</td>
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2802
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2802
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<pre style="margin: 0;"> <span id="LC2802" class="line" lang="mosel"> <span class="n" style="color: #333;">techniques</span><span class="p">.</span> <span class="n" style="color: #333;">It</span> <span class="n" style="color: #333;">can</span> <span class="n" style="color: #333;">be</span> <span class="n" style="color: #333;">used</span> <span class="n" style="color: #333;">through</span> <span class="n" style="color: #333;">a</span> <span class="n" style="color: #333;">nice</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">intuitive</span> <span class="n" style="color: #333;">user</span> <span class="n" style="color: #333;">interface</span></span>
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2803
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2803
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<pre style="margin: 0;"> <span id="LC2803" class="line" lang="mosel"> <span class="k" style="font-weight: 600;">or</span><span class="p">,</span> <span class="n" style="color: #333;">for</span> <span class="n" style="color: #333;">more</span> <span class="n" style="color: #333;">advanced</span> <span class="n" style="color: #333;">users</span><span class="p">,</span> <span class="k" style="font-weight: 600;">as</span> <span class="n" style="color: #333;">a</span> <span class="n" style="color: #333;">module</span> <span class="n" style="color: #333;">for</span> <span class="n" style="color: #333;">Python</span> <span class="n" style="color: #333;">programming</span> <span class="n" style="color: #333;">language</span><span class="p">.</span></span>
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2804
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2804
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<pre style="margin: 0;"> <span id="LC2804" class="line" lang="mosel"></span>
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2805
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<td class="diff-line-num new_line old" data-linenumber="2805" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC2805" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Suggest</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">tigr</span><span class="p">-</span><span class="n" style="color: #333;">glimmer</span><span class="p">-</span><span class="n" style="color: #333;">mg</span></span>
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2805
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<pre style="margin: 0;">+<span id="LC2805" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">Recommend</span>s</span><span class="p">:</span> <span class="n" style="color: #333;">tigr</span><span class="p">-</span><span class="n" style="color: #333;">glimmer</span><span class="p">-</span><span class="n" style="color: #333;">mg</span></span>
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2806
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2806
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<pre style="margin: 0;"> <span id="LC2806" class="line" lang="mosel"></span>
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2807
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2807
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<pre style="margin: 0;"> <span id="LC2807" class="line" lang="mosel"><span class="n" style="color: #333;">Comment</span><span class="p">:</span> <span class="n" style="color: #333;">Several</span> <span class="n" style="color: #333;">related</span> <span class="n" style="color: #333;">R</span> <span class="n" style="color: #333;">packages</span> <span class="n" style="color: #333;">are</span> <span class="n" style="color: #333;">listed</span> <span class="n" style="color: #333;">at</span> <span class="n" style="color: #333;">CRAN</span><span class="p">:</span></span>
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2808
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2808
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<pre style="margin: 0;"> <span id="LC2808" class="line" lang="mosel"> <span class="n" style="color: #333;">http</span><span class="p">://</span><span class="n" style="color: #333;">cran</span><span class="p">.</span><span class="n" style="color: #333;">r</span><span class="p">-</span><span class="n" style="color: #333;">project</span><span class="p">.</span><span class="n" style="color: #333;">org</span><span class="p">/</span><span class="n" style="color: #333;">web</span><span class="p">/</span><span class="n" style="color: #333;">views</span><span class="p">/</span><span class="n" style="color: #333;">Genetics</span><span class="p">.</span><span class="n" style="color: #333;">html</span></span>
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