[med-svn] r4344 - in trunk/packages/R: . r-bioc-hilbertvis r-bioc-hilbertvis/trunk r-bioc-hilbertvis/trunk/debian

[Andreas Tille]

Author: tille
Date: 2009-11-19 08:01:09 +0000 (Thu, 19 Nov 2009)
New Revision: 4344

Added:
   trunk/packages/R/r-bioc-hilbertvis/
   trunk/packages/R/r-bioc-hilbertvis/trunk/
   trunk/packages/R/r-bioc-hilbertvis/trunk/debian/
   trunk/packages/R/r-bioc-hilbertvis/trunk/debian/changelog
   trunk/packages/R/r-bioc-hilbertvis/trunk/debian/compat
   trunk/packages/R/r-bioc-hilbertvis/trunk/debian/control
   trunk/packages/R/r-bioc-hilbertvis/trunk/debian/copyright
   trunk/packages/R/r-bioc-hilbertvis/trunk/debian/rules
Log:
Injected r-bioc-hilbertvis according to VCS field


Added: trunk/packages/R/r-bioc-hilbertvis/trunk/debian/changelog
===================================================================
--- trunk/packages/R/r-bioc-hilbertvis/trunk/debian/changelog	                        (rev 0)
+++ trunk/packages/R/r-bioc-hilbertvis/trunk/debian/changelog	2009-11-19 08:01:09 UTC (rev 4344)
@@ -0,0 +1,5 @@
+r-bioc-hilbertvis (1.5.0-1) unstable; urgency=low
+
+  * Initial release (Closes: #555921).
+  
+ -- Steffen Moeller <moeller at debian.org>  Thu, 12 Nov 2009 15:15:08 +0100

Added: trunk/packages/R/r-bioc-hilbertvis/trunk/debian/compat
===================================================================
--- trunk/packages/R/r-bioc-hilbertvis/trunk/debian/compat	                        (rev 0)
+++ trunk/packages/R/r-bioc-hilbertvis/trunk/debian/compat	2009-11-19 08:01:09 UTC (rev 4344)
@@ -0,0 +1 @@
+5

Added: trunk/packages/R/r-bioc-hilbertvis/trunk/debian/control
===================================================================
--- trunk/packages/R/r-bioc-hilbertvis/trunk/debian/control	                        (rev 0)
+++ trunk/packages/R/r-bioc-hilbertvis/trunk/debian/control	2009-11-19 08:01:09 UTC (rev 4344)
@@ -0,0 +1,24 @@
+Source: r-bioc-hilbertvis
+Section: math
+Priority: optional
+Maintainer: Debian-Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
+Uploaders: Steffen Moeller <moeller at debian.org>
+Build-Depends: debhelper (>= 5.0.0), cdbs, r-base-dev (>= 2.10.0)
+Standards-Version: 3.8.3
+Homepage: http://www.ebi.ac.uk/~anders/hilbert
+Vcs-Browser: http://svn.debian.org/wsvn/debian-med/trunk/packages/R/r-bioc-hilbertvis/trunk/?rev=0&sc=0
+Vcs-Svn: svn://svn.debian.org/svn/debian-med/trunk/packages/R/r-bioc-hilbertvis/trunk/
+
+Package: r-bioc-hilbertvis
+Architecture: any
+Depends: ${shlibs:Depends}, r-base-core (>= 2.10.0)
+Description: GNU R package to visualise long vector data
+ This tool allows to display very long data vectors in a space-efficient
+ manner, by organising it along a 2D Hilbert curve. The user can then 
+ visually judge the large scale structure and distribution of features
+ simultaenously with the rough shape and intensity of individual features.
+ .
+ In bioinformatics, a typical use case is ChIP-Chip and ChIP-Seq,
+ or basically all the kinds of genomic data, that are conventionally
+ displayed as quantitative track ("wiggle data") in genome browsers such
+ as those provided by Ensembl or UCSC.

Added: trunk/packages/R/r-bioc-hilbertvis/trunk/debian/copyright
===================================================================
--- trunk/packages/R/r-bioc-hilbertvis/trunk/debian/copyright	                        (rev 0)
+++ trunk/packages/R/r-bioc-hilbertvis/trunk/debian/copyright	2009-11-19 08:01:09 UTC (rev 4344)
@@ -0,0 +1,18 @@
+The R library HilvertVis was written by Simon Anders <sanders at fs.tum.de>
+at the European Bioinformatics Institute (EBI), an outstation of the
+European Molecular Biology Lab (EMBL), in the group of Wolfgang Huber.
+
+This package was created by Steffen Moeller <moeller at debian.org>.
+
+The sources were downloaded from
+http://www.bioconductor.org/packages/devel/bioc/src/contrib/ .
+
+The package was renamed from its upstream name 'HilvertVis' to
+'r-bioc-hilbertvis' to highlight the fact that is it a package for
+R within the BioConductor archive and the policy to use lower case
+characters for package names.
+
+HilbertVis is copyright 2008-9 by the author and released under the
+GNU General Public License (GPL) version 3 or any later version.
+On a Debian GNU/Linux system, the GPL license is included in the file
+/usr/share/common-licenses/GPL-3.

Added: trunk/packages/R/r-bioc-hilbertvis/trunk/debian/rules
===================================================================
--- trunk/packages/R/r-bioc-hilbertvis/trunk/debian/rules	                        (rev 0)
+++ trunk/packages/R/r-bioc-hilbertvis/trunk/debian/rules	2009-11-19 08:01:09 UTC (rev 4344)
@@ -0,0 +1,7 @@
+#!/usr/bin/make -f
+# 							-*- makefile -*-
+# debian/rules file for the Debian/GNU Linux r-cran-qtl package
+# Copyright 2003-2006 by Dirk Eddelbuettel <edd at debian.org>
+
+debRreposname=bioc
+include /usr/share/R/debian/r-cran.mk


Property changes on: trunk/packages/R/r-bioc-hilbertvis/trunk/debian/rules
___________________________________________________________________
Added: svn:executable
   + *