[med-svn] [SCM] fastx-toolkit branch, master, updated. upstream/0.0.13-6-gcc97956

[Charles Plessy]

The following commit has been merged in the master branch:
commit cc97956833c8b93695e5b7ed45a2b87b1654e79e
Author: Charles Plessy <plessy at debian.org>
Date:   Thu Apr 14 11:25:04 2011 +0900

    Uploaded version 0.0.13-1 after adding missing build dep and polishing a bit.

diff --git a/DRAFT b/DRAFT
deleted file mode 100644
index 213bdf5..0000000
--- a/DRAFT
+++ /dev/null
@@ -1,2 +0,0 @@
-This package is a draft. Everybody is welcome to polish it and make
-it suitable for upload in Debian.
diff --git a/debian/changelog b/debian/changelog
index 7ffffac..039d39d 100644
--- a/debian/changelog
+++ b/debian/changelog
@@ -1,5 +1,5 @@
-fastx-toolkit (0.0.13-1) UNRELEASED; urgency=low
+fastx-toolkit (0.0.13-1) unstable; urgency=low
 
-  * Initial release (Closes: #nnnn)  <nnnn is the bug number of your ITP>
+  * Initial release (Closes: #622700)
 
- -- Charles Plessy <plessy at debian.org>  Mon, 13 Jul 2009 17:06:32 +0900
+ -- Charles Plessy <plessy at debian.org>  Thu, 14 Apr 2011 14:00:57 +0900
diff --git a/debian/control b/debian/control
index 247d911..b53a94d 100644
--- a/debian/control
+++ b/debian/control
@@ -4,7 +4,7 @@ Priority: optional
 Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
 DM-Upload-Allowed: yes
 Uploaders: Charles Plessy <plessy at debian.org>
-Build-Depends: cdbs, debhelper (>= 8), autotools-dev
+Build-Depends: cdbs, debhelper (>= 8), autotools-dev, pkg-config, libgtextutils-dev
 Standards-Version: 3.9.1
 Vcs-Browser: http://git.debian.org/?p=debian-med/fastx-toolkit.git
 Vcs-Git: git://git.debian.org/git/debian-med/fastx-toolkit.git
@@ -18,7 +18,7 @@ Description: FASTQ/A short nucleotide reads pre-processing tools
  short nucleotide reads in FASTA and FASTQ formats, usually produced by
  Next-Generation sequencing machines. The main processing of such FASTA/FASTQ
  files is mapping (aligning) the sequences to reference genomes or other
- databases using specialized programs like BWA, Bowtie and many many others.
+ databases using specialized programs like BWA, Bowtie and many others.
  However, it is sometimes more productive to preprocess the FASTA/FASTQ files
  before mapping the sequences to the genome—manipulating the sequences to
  produce better mapping results. The FASTX-Toolkit tools perform some of these
diff --git a/debian/gbp.conf b/debian/gbp.conf
new file mode 100644
index 0000000..a2af6ef
--- /dev/null
+++ b/debian/gbp.conf
@@ -0,0 +1,5 @@
+# This package is managed using git-buildpackage 
+
+[DEFAULT]
+# use pristine-tar:
+pristine-tar = True
diff --git a/debian/rules b/debian/rules
index c19b8ef..134b09e 100755
--- a/debian/rules
+++ b/debian/rules
@@ -1,4 +1,9 @@
 #!/usr/bin/make -f
 
+DEB_INSTALL_CHANGELOGS_ALL = NEWS
+
 include /usr/share/cdbs/1/rules/debhelper.mk
 include /usr/share/cdbs/1/class/autotools.mk
+
+install/fastx-toolkit::
+	rm --recursive $(CURDIR)/debian/fastx-toolkit/usr/share/aclocal
diff --git a/debian/source/format b/debian/source/format
new file mode 100644
index 0000000..163aaf8
--- /dev/null
+++ b/debian/source/format
@@ -0,0 +1 @@
+3.0 (quilt)

-- 
FASTQ/A short-reads pre-processing tools