[med-svn] [placnet] 01/01: Add manpage

[Andreas Tille]

This is an automated email from the git hooks/post-receive script.

tille pushed a commit to branch master
in repository placnet.

commit 5c1249cef68184b12650306e419db36c1ca96d88
Author: Andreas Tille <tille at debian.org>
Date:   Mon Oct 12 15:21:26 2015 +0200

    Add manpage
---
 debian/copyright |  3 ++-
 debian/manpages  |  1 +
 debian/placnet.1 | 30 ++++++++++++++++++++++++++++++
 3 files changed, 33 insertions(+), 1 deletion(-)

diff --git a/debian/copyright b/debian/copyright
index f8b29f7..2ffc2b5 100644
--- a/debian/copyright
+++ b/debian/copyright
@@ -3,7 +3,8 @@ Upstream-Name: Placnet
 Source: http://sourceforge.net/projects/placnet/files/
 
 Files: *
-Copyright: 2013-2015 María de Toro
+Copyright: 2013-2015 Val F. Lanza <valfernandez.vf at gmail.com>,
+                     Maria de Toro <mdtorohernando at gmail.com>
 License: CC-BY
 
 Files: debian/*
diff --git a/debian/manpages b/debian/manpages
new file mode 100644
index 0000000..0f65186
--- /dev/null
+++ b/debian/manpages
@@ -0,0 +1 @@
+debian/*.1
diff --git a/debian/placnet.1 b/debian/placnet.1
new file mode 100644
index 0000000..d3e20ad
--- /dev/null
+++ b/debian/placnet.1
@@ -0,0 +1,30 @@
+.TH PLACNET "1" "October 2015" "placnet 1.03" "User Commands"
+.SH NAME
+placnet \- Plasmid Constellation Network project
+.SH DESCRIPTION
+Placnet is a new tool for plasmid analysis in NGS projects. Placnet has
+been written in Perl. It's been optimized to work with Illumina
+sequences but it also works with 454, Iontorrent or any of the actual
+sequence technologies.
+.SH OPTIONS
+Write inputFile Template
+.PP
+\fBplacnet\fR \fI\-generate\fR
+.PP
+Network process
+.PP
+\fBplacnet\fR \fI\-f\fR inputFile.txt \fI\-p\fR prefix \fI\-l\fR min
+.TP
+\fB\-f\fR=\fI\,s\/\fR
+Input file for PLACNET analysis.
+.TP
+\fB\-p\fR=\fI\,s\/\fR
+Prefix name for output files (default 'placnet').
+.TP
+\fB\-l\fR=\fI\,s\/\fR
+Minimun contig length to scaffold process (default '200').
+.SH SEE ALSO
+Lanza VF, de Toro M, Garcill??n\-Barcia MP, Mora A, Blanco J, Coque TM, de la Cruz F:
+Plasmid Flux in Escherichia coli ST131 Sublineages, Analyzed by Plasmid Constellation Network (PLACNET),
+a New Method for Plasmid Reconstruction from Whole Genome Sequences.
+PLoS Genet 2014, 10:e1004766

-- 
Alioth's /usr/local/bin/git-commit-notice on /srv/git.debian.org/git/debian-med/placnet.git