[med-svn] r20227 - in trunk/packages: . python-pyfasta python-pyfasta/trunk python-pyfasta/trunk/debian python-pyfasta/trunk/debian/source
Andreas Tille
tille at moszumanska.debian.org
Tue Oct 13 21:07:06 UTC 2015
Author: tille
Date: 2015-10-13 21:07:05 +0000 (Tue, 13 Oct 2015)
New Revision: 20227
Added:
trunk/packages/python-pyfasta/
trunk/packages/python-pyfasta/trunk/
trunk/packages/python-pyfasta/trunk/debian/
trunk/packages/python-pyfasta/trunk/debian/changelog
trunk/packages/python-pyfasta/trunk/debian/compat
trunk/packages/python-pyfasta/trunk/debian/control
trunk/packages/python-pyfasta/trunk/debian/copyright
trunk/packages/python-pyfasta/trunk/debian/rules
trunk/packages/python-pyfasta/trunk/debian/source/
trunk/packages/python-pyfasta/trunk/debian/source/format
trunk/packages/python-pyfasta/trunk/debian/watch
Log:
Inject python-pyfasta
Added: trunk/packages/python-pyfasta/trunk/debian/changelog
===================================================================
--- trunk/packages/python-pyfasta/trunk/debian/changelog (rev 0)
+++ trunk/packages/python-pyfasta/trunk/debian/changelog 2015-10-13 21:07:05 UTC (rev 20227)
@@ -0,0 +1,5 @@
+python-pyfasta (0.5.2-1) UNRELEASED; urgency=medium
+
+ * Initial upload (Closes: #??)
+
+ -- Andreas Tille <tille at debian.org> Tue, 13 Oct 2015 17:02:08 +0200
Added: trunk/packages/python-pyfasta/trunk/debian/compat
===================================================================
--- trunk/packages/python-pyfasta/trunk/debian/compat (rev 0)
+++ trunk/packages/python-pyfasta/trunk/debian/compat 2015-10-13 21:07:05 UTC (rev 20227)
@@ -0,0 +1 @@
+9
Added: trunk/packages/python-pyfasta/trunk/debian/control
===================================================================
--- trunk/packages/python-pyfasta/trunk/debian/control (rev 0)
+++ trunk/packages/python-pyfasta/trunk/debian/control 2015-10-13 21:07:05 UTC (rev 20227)
@@ -0,0 +1,47 @@
+Source: python-pyfasta
+Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
+Uploaders: Andreas Tille <tille at debian.org>
+Section: python
+Priority: optional
+Build-Depends: debhelper (>= 9),
+ dh-python,
+ python-all (>= 2.7),
+ python-setuptools,
+ python-nose,
+ python-numpy,
+ python3-all,
+ python3-setuptools,
+ python3-nose,
+ python3-numpy
+Standards-Version: 3.9.6
+Vcs-Browser: http://anonscm.debian.org/viewvc/debian-med/trunk/packages/python-pyfasta/trunk/
+Vcs-Svn: svn://anonscm.debian.org/debian-med/trunk/packages/python-pyfasta/trunk/
+Homepage: https://pypi.python.org/pypi/pyfasta/
+
+Package: python-pyfasta
+Architecture: all
+Depends: ${misc:Depends},
+ ${python:Depends}
+Description: fast, memory-efficient Python 2 access to fasta sequence files
+ In bioinformatics, FASTA format is a text-based format for representing
+ either nucleotide sequences or peptide sequences, in which nucleotides
+ or amino acids are represented using single-letter codes. The format
+ also allows for sequence names and comments to precede the sequences.
+ The format originates from the FASTA software package, but has now
+ become a standard in the field of bioinformatics.
+ .
+ This package provides the Python 2 modules to access fasta files.
+
+Package: python3-pyfasta
+Architecture: all
+Depends: ${misc:Depends},
+ ${python3:Depends}
+Description: fast, memory-efficient Python 3 access to fasta sequence files
+ In bioinformatics, FASTA format is a text-based format for representing
+ either nucleotide sequences or peptide sequences, in which nucleotides
+ or amino acids are represented using single-letter codes. The format
+ also allows for sequence names and comments to precede the sequences.
+ The format originates from the FASTA software package, but has now
+ become a standard in the field of bioinformatics.
+ .
+ This package provides the Python 3 modules to access fasta files.
Added: trunk/packages/python-pyfasta/trunk/debian/copyright
===================================================================
--- trunk/packages/python-pyfasta/trunk/debian/copyright (rev 0)
+++ trunk/packages/python-pyfasta/trunk/debian/copyright 2015-10-13 21:07:05 UTC (rev 20227)
@@ -0,0 +1,31 @@
+Format: http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
+Upstream-Name: pyfasta
+Upstream-Contact: Brent Pedersen <bpederse at gmail.com>
+Source: https://pypi.python.org/pypi/pyfasta
+
+Files: *
+Copyright: 2011-2015 Brent Pedersen <bpederse at gmail.com>
+License: MIT
+
+Files: debian/*
+Copyright: 2015 Andreas Tille <tille at debian.org>
+License: MIT
+
+License: MIT
+ Permission is hereby granted, free of charge, to any person obtaining a copy
+ of this software and associated documentation files (the "Software"), to deal
+ in the Software without restriction, including without limitation the rights
+ to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
+ copies of the Software, and to permit persons to whom the Software is
+ furnished to do so, subject to the following conditions:
+ .
+ The above copyright notice and this permission notice shall be included in
+ all copies or substantial portions of the Software.
+ .
+ THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
+ IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
+ FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
+ AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
+ LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
+ OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN
+ THE SOFTWARE.
Added: trunk/packages/python-pyfasta/trunk/debian/rules
===================================================================
--- trunk/packages/python-pyfasta/trunk/debian/rules (rev 0)
+++ trunk/packages/python-pyfasta/trunk/debian/rules 2015-10-13 21:07:05 UTC (rev 20227)
@@ -0,0 +1,11 @@
+#!/usr/bin/make -f
+# -*- makefile -*-
+
+# Uncomment this to turn on verbose mode.
+#export DH_VERBOSE=1
+
+export PYBUILD_NAME=pyfasta
+
+%:
+ dh $@ --with python2,python3 --buildsystem=pybuild
+
Property changes on: trunk/packages/python-pyfasta/trunk/debian/rules
___________________________________________________________________
Added: svn:executable
+ *
Added: trunk/packages/python-pyfasta/trunk/debian/source/format
===================================================================
--- trunk/packages/python-pyfasta/trunk/debian/source/format (rev 0)
+++ trunk/packages/python-pyfasta/trunk/debian/source/format 2015-10-13 21:07:05 UTC (rev 20227)
@@ -0,0 +1 @@
+3.0 (quilt)
Added: trunk/packages/python-pyfasta/trunk/debian/watch
===================================================================
--- trunk/packages/python-pyfasta/trunk/debian/watch (rev 0)
+++ trunk/packages/python-pyfasta/trunk/debian/watch 2015-10-13 21:07:05 UTC (rev 20227)
@@ -0,0 +1,2 @@
+version=3
+https://pypi.python.org/pypi/pyfasta .*/pyfasta-([0-9.]+).tar.[xgb]z2?
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