[med-svn] [snap-aligner] branch master updated (4179322 -> dabe2c2)

[Michael Crusoe]

This is an automated email from the git hooks/post-receive script.

misterc-guest pushed a change to branch master
in repository snap-aligner.

      from  4179322   update VCS URLs
       new  88356cc   hack around misplaced files from upstream
      adds  7e016af   Imported Upstream version 0.18~1.0~beta.18
       new  61f7a60   Imported Upstream version 0.18~1.0~beta.18+dfsg1
       new  0eb741e   Imported Upstream version 0.18~1.0~beta.18+dfsg1
       new  dabe2c2   Merge tag 'upstream/0.18_1.0_beta.18+dfsg1'

The 4 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails.  The revisions
listed as "adds" were already present in the repository and have only
been added to this reference.


Summary of changes:
 debian/changelog                             |    2 +-
 debian/copyright                             |    7 +-
 debian/patches/series                        |    1 +
 debian/patches/skip-sam-validate             |   36 +
 import/pdclibhdfs/src/TstOpsHdfs.tdprj.xml   |   40 -
 import/pdclibhdfs/src/TstReadHdfs.tdprj.xml  |   40 -
 import/pdclibhdfs/src/TstWriteHdfs.tdprj.xml |   40 -
 import/pdclibhdfs/src/pdclibhdfs.tdprj.xml   |  196 ---
 import/zconf.h                               |  511 --------
 import/zlib.h                                | 1768 --------------------------
 import/zlibstat.lib                          |  Bin 773824 -> 0 bytes
 tests/bin/ValidateSamFile.jar                |  Bin 976301 -> 0 bytes
 tests/bin/diff.exe                           |  Bin 68608 -> 0 bytes
 tests/bin/grep.exe                           |  Bin 81408 -> 0 bytes
 tests/bin/gzip.exe                           |  Bin 50688 -> 0 bytes
 tests/bin/msys-1.0.dll                       |  Bin 743240 -> 0 bytes
 tests/bin/samtools.exe                       |  Bin 460800 -> 0 bytes
 tests/bin/sort.exe                           |  Bin 22528 -> 0 bytes
 tests/datatest/ValidateSamFile.jar           |  Bin 947804 -> 0 bytes
 19 files changed, 42 insertions(+), 2599 deletions(-)
 create mode 100644 debian/patches/skip-sam-validate
 delete mode 100755 import/pdclibhdfs/src/TstOpsHdfs.tdprj.xml
 delete mode 100755 import/pdclibhdfs/src/TstReadHdfs.tdprj.xml
 delete mode 100755 import/pdclibhdfs/src/TstWriteHdfs.tdprj.xml
 delete mode 100755 import/pdclibhdfs/src/pdclibhdfs.tdprj.xml
 delete mode 100644 import/zconf.h
 delete mode 100644 import/zlib.h
 delete mode 100644 import/zlibstat.lib
 delete mode 100644 tests/bin/ValidateSamFile.jar
 delete mode 100644 tests/bin/diff.exe
 delete mode 100644 tests/bin/grep.exe
 delete mode 100644 tests/bin/gzip.exe
 delete mode 100644 tests/bin/msys-1.0.dll
 delete mode 100644 tests/bin/samtools.exe
 delete mode 100644 tests/bin/sort.exe
 delete mode 100644 tests/datatest/ValidateSamFile.jar

-- 
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