[med-svn] [dindel] 04/04: Fix linking

Andreas Tille tille at debian.org
Sat Mar 19 06:19:13 UTC 2016


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tille pushed a commit to branch master
in repository dindel.

commit f70e63792998d42215404c7e2fbba4cf9b9e7edb
Author: Andreas Tille <tille at debian.org>
Date:   Sat Mar 19 07:18:37 2016 +0100

    Fix linking
---
 debian/patches/modernize-Makefile.patch | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/debian/patches/modernize-Makefile.patch b/debian/patches/modernize-Makefile.patch
index be3c531..d221f62 100644
--- a/debian/patches/modernize-Makefile.patch
+++ b/debian/patches/modernize-Makefile.patch
@@ -11,7 +11,7 @@ Index: dindel-1.01+dfsg/Makefile
  CPPFLAGS= -DNDEBUG -D_IOLIB=2 -DMINREADS=2 -DDINDEL
  CXXFLAGS= -I$(SAMTOOLDIR) -I$(SEQANDIR) -I./  -Wno-deprecated  -O3 
 -LDFLAGS= -L$(SAMTOOLDIR)  -lbam -lz -lboost_program_options -static 
-+LDFLAGS=  -lbam -lz /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.55.0 -lpthread
++LDFLAGS=  -lbam -lz -lboost_program_options -lpthread
  
  SRCSDINDEL=DInDel.cpp HapBlock.cpp HaplotypeDistribution.cpp ObservationModelFB.cpp GetCandidates.cpp Faster.cpp
  OBJSDINDEL=$(SRCSDINDEL:%.cpp=%.o)  

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