[med-svn] [surankco] 02/02: Enable htsjdk

[Andreas Tille]

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tille pushed a commit to branch master
in repository surankco.

commit fadfe7d301eb7b5210018a6382bc58a1cf0c511b
Author: Andreas Tille <tille at debian.org>
Date:   Thu Mar 24 15:06:54 2016 +0100

    Enable htsjdk
---
 debian/control | 3 ++-
 debian/rules   | 2 ++
 2 files changed, 4 insertions(+), 1 deletion(-)

diff --git a/debian/control b/debian/control
index 883338d..1a830ef 100644
--- a/debian/control
+++ b/debian/control
@@ -5,7 +5,8 @@ Section: science
 Priority: optional
 Build-Depends: debhelper (>= 9),
                javahelper,
-               default-jdk
+               default-jdk,
+               libhtsjdk-java
 Standards-Version: 3.9.7
 Vcs-Browser: https://anonscm.debian.org/cgit/debian-med/surankco.git
 Vcs-Git: https://anonscm.debian.org/git/debian-med/surankco.git
diff --git a/debian/rules b/debian/rules
index 16e3199..0dfd1cf 100755
--- a/debian/rules
+++ b/debian/rules
@@ -5,6 +5,8 @@
 DEBPKGNAME     := $(shell dpkg-parsechangelog | awk '/^Source:/ {print $$2}')
 
 export JAVA_HOME  := /usr/lib/jvm/default-java
+DEBJAR    := /usr/share/java
+export CLASSPATH := $(DEBJAR)/htsjdk.jar
 
 %:
 	dh $@ --with javahelper

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