[med-svn] [graphlan] 12/14: New upstream version 1.1
Andreas Tille
tille at debian.org
Wed Nov 15 10:35:03 UTC 2017
This is an automated email from the git hooks/post-receive script.
tille pushed a commit to branch master
in repository graphlan.
commit 027e8425d87d80401a74130bca1e59ce06d7b73a
Author: Andreas Tille <tille at debian.org>
Date: Wed Nov 15 11:28:17 2017 +0100
New upstream version 1.1
---
.hg_archival.txt | 4 +
.hgignore | 6 +
.hgsub | 2 +
.hgsubstate | 2 +
.hgtags | 7 +
debian/README.test | 19 -
debian/changelog | 12 -
debian/compat | 1 -
debian/control | 25 -
debian/copyright | 32 -
debian/docs | 2 -
debian/examples | 1 -
debian/graphlan.1 | 65 -
debian/graphlan_annotate.1 | 42 -
debian/install | 2 -
debian/links | 2 -
debian/manpages | 1 -
debian/rules | 17 -
debian/source/format | 1 -
debian/tests/control | 3 -
debian/tests/run-unit-test | 22 -
debian/watch | 3 -
examples/DisappearingMicrobiome/DisMic.xml | 26217 +++++++++++++++++++
examples/DisappearingMicrobiome/annot.txt | 18814 +++++++++++++
examples/DisappearingMicrobiome/genomes.all.txt | 3739 +++
examples/DisappearingMicrobiome/run.sh | 57 +
examples/HMP_tree/annot.txt | 8866 +++++++
examples/HMP_tree/hmptree.xml | 2694 ++
examples/HMP_tree/run.sh | 3 +
examples/HMP_tree_simple/annot.txt | 756 +
examples/HMP_tree_simple/hmptree.xml | 2694 ++
examples/HMP_tree_simple/run.sh | 3 +
examples/IBD_biogeography/IBDgeo.txt | 220 +
examples/IBD_biogeography/annotation.txt | 174 +
examples/IBD_biogeography/run.sh | 3 +
examples/PhyloPhlAn/annot.txt | 22293 ++++++++++++++++
examples/PhyloPhlAn/ppa_tol.xml | 26217 +++++++++++++++++++
examples/PhyloPhlAn/run.sh | 3 +
examples/archaea/annot.txt | 747 +
examples/archaea/archaea.txt | 121 +
examples/archaea/run.sh | 3 +
examples/guide/annot_0.txt | 7 +
examples/guide/annot_1.txt | 41 +
examples/guide/annot_2.txt | 24 +
examples/guide/annot_3.txt | 429 +
examples/guide/guide.txt | 51 +
examples/guide/step0.sh | 2 +
examples/guide/step1.sh | 3 +
examples/guide/step2.sh | 3 +
examples/guide/step3.sh | 3 +
examples/guide/step4.sh | 3 +
examples/gut_microbiome/annot.txt | 570 +
examples/gut_microbiome/gut_microbiome.txt | 290 +
examples/gut_microbiome/run.sh | 3 +
examples/hmp_metahit/PIPELINE.sh | 106 +
examples/hmp_metahit/merge-very-good.txt | 891 +
examples/hmp_metahit/merge-very-good.txt.out | 890 +
examples/hmp_metahit/metahit.txt | 264 +
examples/hmp_metahit_functional/PIPELINE.sh | 88 +
examples/hmp_metahit_functional/hmp.txt | 315 +
examples/hmp_metahit_functional/merge-humann.py | 163 +
examples/hmp_metahit_functional/merge.txt | 302 +
examples/hmp_metahit_functional/merge.txt.out | 344 +
examples/hmp_metahit_functional/metahit.txt | 268 +
.../hmp_metahit_functional/metahit_download.txt | 264 +
examples/hmp_metahit_functional/metahit_map.txt | 124 +
examples/internal_labels/annot_0.txt | 22 +
examples/internal_labels/annot_1.txt | 99 +
examples/internal_labels/annot_2.txt | 36 +
examples/internal_labels/annot_3.txt | 239 +
examples/internal_labels/archaea.txt | 86 +
examples/internal_labels/readme.txt | 27 +
examples/internal_labels/step0.sh | 3 +
examples/internal_labels/step1.sh | 4 +
examples/internal_labels/step2.sh | 4 +
examples/internal_labels/step3.sh | 4 +
examples/internal_labels/step4.sh | 4 +
examples/kegg/annot.txt | 20167 ++++++++++++++
examples/kegg/ppa_kegg_raxml.names.nn.nwk | 6873 +++++
examples/kegg/run.sh | 3 +
examples/metaref_fams/mr1.a.txt | 138 +
examples/metaref_fams/mr1.txt | 94 +
examples/metaref_fams/mr2.a.txt | 72 +
examples/metaref_fams/run.sh | 8 +
examples/phylo_small/annot.txt | 948 +
examples/phylo_small/phylo_small.xml | 274 +
examples/phylo_small/run.sh | 3 +
examples/readme.txt | 6 +
examples/saliva_microbiome/PIPELINE.sh | 14 +
examples/saliva_microbiome/otu_table.biom | 1 +
examples/simple/annot.txt | 58 +
examples/simple/core_genes.txt | 192 +
examples/simple/run.sh | 3 +
examples/vaginal_microbiota/PIPELINE.sh | 14 +
.../stm_otu_table_with_taxonomy.biom | 1 +
graphlan.py | 70 +
graphlan_annotate.py | 57 +
license.txt | 7 +
readme.txt | 468 +
src/__init__.py | 0
src/graphlan_lib.py | 1079 +
src/pyphlan.py | 729 +
102 files changed, 150900 insertions(+), 250 deletions(-)
diff --git a/.hg_archival.txt b/.hg_archival.txt
new file mode 100644
index 0000000..795cc51
--- /dev/null
+++ b/.hg_archival.txt
@@ -0,0 +1,4 @@
+repo: 0fdb21ec3cf53e710d679fbd7768f91510570ae7
+node: edea23ce7c21765cbd9ff601e1f91614241eae81
+branch: default
+tag: 1.1
diff --git a/.hgignore b/.hgignore
new file mode 100644
index 0000000..d07433d
--- /dev/null
+++ b/.hgignore
@@ -0,0 +1,6 @@
+syntax: glob
+.hgignore
+*.pyc
+*.DS_Store
+*.log
+examples/test/
diff --git a/.hgsub b/.hgsub
new file mode 100644
index 0000000..489101e
--- /dev/null
+++ b/.hgsub
@@ -0,0 +1,2 @@
+pyphlan = https://bitbucket.org/nsegata/pyphlan
+export2graphlan = https://bitbucket.org/cibiocm/export2graphlan
diff --git a/.hgsubstate b/.hgsubstate
new file mode 100644
index 0000000..9c8ec05
--- /dev/null
+++ b/.hgsubstate
@@ -0,0 +1,2 @@
+b2e0ba66718673ea28cb217c8e5dcd8e578fd033 export2graphlan
+eae40ebc0030c7179baed999c74de412ba696598 pyphlan
diff --git a/.hgtags b/.hgtags
new file mode 100644
index 0000000..ada20f5
--- /dev/null
+++ b/.hgtags
@@ -0,0 +1,7 @@
+0000000000000000000000000000000000000000 v0.8
+0000000000000000000000000000000000000000 v0.8
+0fdb21ec3cf53e710d679fbd7768f91510570ae7 v0.8
+ba9c6f680022333b5b1bf0652748ab2db29e888a 0.9
+eaa3d2e05d74912da0f013bbfbb199764b180f05 0.9.5
+64570f7d4ae33f46ddd360101c13555396a0cab1 0.9.6
+7d483b7d34ccadb30f5c56f82b7aab19a820d1d6 1.0
diff --git a/debian/README.test b/debian/README.test
deleted file mode 100644
index d31ce5d..0000000
--- a/debian/README.test
+++ /dev/null
@@ -1,19 +0,0 @@
-Notes on how this package can be tested.
-────────────────────────────────────────
-
-GraPhlAn comes with a set of examples which can be found in a
-subdirectory here. You can use the shell scripts inside the
-subdirectories for testing but you need to copy the files to
-some place werte you have write permissions and gunzip the
-compressed data files.
-
-Alternatively you can run the script run-unit-test in this
-directory which runs all available examples as tests.
-
-Some tests are requiring
-
- https://bitbucket.org/CibioCM/export2graphlan/
-
-which would need to be packaged (see
- https://lists.debian.org/debian-med/2016/06/msg00110.html
-)
diff --git a/debian/changelog b/debian/changelog
deleted file mode 100644
index 6d6da7d..0000000
--- a/debian/changelog
+++ /dev/null
@@ -1,12 +0,0 @@
-graphlan (1.1-2) unstable; urgency=medium
-
- * Fix watch file
- * debhelper 10
-
- -- Andreas Tille <tille at debian.org> Mon, 09 Jan 2017 17:13:45 +0100
-
-graphlan (1.1-1) unstable; urgency=medium
-
- * Initial release (Closes: #826005)
-
- -- Andreas Tille <tille at debian.org> Wed, 01 Jun 2016 13:16:34 +0200
diff --git a/debian/compat b/debian/compat
deleted file mode 100644
index f599e28..0000000
--- a/debian/compat
+++ /dev/null
@@ -1 +0,0 @@
-10
diff --git a/debian/control b/debian/control
deleted file mode 100644
index 3b0f813..0000000
--- a/debian/control
+++ /dev/null
@@ -1,25 +0,0 @@
-Source: graphlan
-Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
-Uploaders: Andreas Tille <tille at debian.org>
-Section: science
-Priority: optional
-Build-Depends: debhelper (>= 10),
- python-all,
- dh-python
-Standards-Version: 3.9.8
-Vcs-Browser: https://anonscm.debian.org/viewvc/debian-med/trunk/packages/graphlan/trunk/
-Vcs-Svn: svn://anonscm.debian.org/debian-med/trunk/packages/graphlan/trunk/
-Homepage: https://bitbucket.org/nsegata/graphlan/wiki/Home
-
-Package: graphlan
-Architecture: all
-Depends: ${python:Depends},
- ${misc:Depends},
- python-biopython,
- python-numpy,
- python-matplotlib
-Description: circular representations of taxonomic and phylogenetic trees
- GraPhlAn is a software tool for producing high-quality circular
- representations of taxonomic and phylogenetic trees. It focuses on
- concise, integrative, informative, and publication-ready representations
- of phylogenetically- and taxonomically-driven investigation.
diff --git a/debian/copyright b/debian/copyright
deleted file mode 100644
index d65344e..0000000
--- a/debian/copyright
+++ /dev/null
@@ -1,32 +0,0 @@
-Format: https://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
-Upstream-Name: GraPhlAn
-Upstream-Contact: Nicola Segata <nicola.segata at unitn.it>
-Source: https://bitbucket.org/nsegata/graphlan/src
-
-Files: *
-Copyright: 2012-2016 Nicola Segata and Curtis Huttenhower
-License: expat
-
-Files: debian/*
-Copyright: 2016 Andreas Tille <tille at debian.org>
-License: expat
-
-License: expat
- Permission is hereby granted, free of charge, to any person obtaining a
- copy of this software and associated documentation files (the
- "Software"), to deal in the Software without restriction, including
- without limitation the rights to use, copy, modify, merge, publish,
- distribute, sublicense, and/or sell copies of the Software, and to
- permit persons to whom the Software is furnished to do so, subject to
- the following conditions:
- .
- The above copyright notice and this permission notice shall be included
- in all copies or substantial portions of the Software.
- .
- THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS
- OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF
- MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT.
- IN NO EV ENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY
- CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION OF CONTRACT,
- TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION WITH THE
- SOFTWARE OR TH E USE OR OTHER DEALINGS IN THE SOFTWARE.
diff --git a/debian/docs b/debian/docs
deleted file mode 100644
index 9a4f4f8..0000000
--- a/debian/docs
+++ /dev/null
@@ -1,2 +0,0 @@
-debian/README.test
-debian/tests/run-unit-test
diff --git a/debian/examples b/debian/examples
deleted file mode 100644
index e39721e..0000000
--- a/debian/examples
+++ /dev/null
@@ -1 +0,0 @@
-examples/*
diff --git a/debian/graphlan.1 b/debian/graphlan.1
deleted file mode 100644
index d5b94a7..0000000
--- a/debian/graphlan.1
+++ /dev/null
@@ -1,65 +0,0 @@
-.\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.47.4.
-.TH GRAPHLAN "1" "June 2016" "graphlan 1.1" "User Commands"
-.SH NAME
-graphlan \- circular representations of taxonomic and phylogenetic trees
-.SH SYNOPSIS
-.B graphlan
-[\-h] [\-\-format ['output_image_format']] [\-\-warnings WARNINGS]
-[\-\-positions POSITIONS] [\-\-dpi image_dpi] [\-\-size image_size]
-[\-\-pad pad_in] [\-\-external_legends] [\-v]
-input_tree output_image
-.SH DESCRIPTION
-GraPhlAn is a software tool for producing high-quality circular
-representations of taxonomic and phylogenetic trees. It focuses on
-concise, integrative, informative, and publication-ready representations
-of phylogenetically- and taxonomically-driven investigation.
-.SH OPTIONS
-.SS "positional arguments:"
-.TP
-input_tree
-the input tree in PhyloXML format
-.TP
-output_image
-the output image, the format is guessed from the
-extension unless \fB\-\-format\fR is given. Available file
-formats are: png, pdf, ps, eps, svg
-.SS "optional arguments:"
-.TP
-\fB\-h\fR, \fB\-\-help\fR
-show this help message and exit
-.TP
-\fB\-\-format\fR ['output_image_format']
-set the format of the output image (default none
-meaning that the format is guessed from the output
-file extension)
-.TP
-\fB\-\-warnings\fR WARNINGS
-set whether warning messages should be reported or not
-(default 1)
-.TP
-\fB\-\-positions\fR POSITIONS
-set whether the absolute position of the points should
-be reported on the standard output. The two
-cohordinates are r and theta
-.TP
-\fB\-\-dpi\fR image_dpi
-the dpi of the output image for non vectorial formats
-.TP
-\fB\-\-size\fR image_size
-the size of the output image (in inches, default 7.0)
-.TP
-\fB\-\-pad\fR pad_in
-the distance between the most external graphical
-element and the border of the image
-.TP
-\fB\-\-external_legends\fR
-specify whether the two external legends should be put
-in separate file or keep them along with the image
-(default behavior)
-.TP
-\fB\-v\fR, \fB\-\-version\fR
-Prints the current GraPhlAn version and exit
-.SH AUTHOR
-The software was written by Nicola Segata <nsegata at hsph.harvard.edu>
-.P
-This manpage was written by Andreas Tille for the Debian distribution and can be used for any other usage of the program.
diff --git a/debian/graphlan_annotate.1 b/debian/graphlan_annotate.1
deleted file mode 100644
index 9660e23..0000000
--- a/debian/graphlan_annotate.1
+++ /dev/null
@@ -1,42 +0,0 @@
-.\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.47.4.
-.TH GRAPHLAN_ANNOTATE "1" "June 2016" "graphlan_annotate 1.1" "User Commands"
-.SH NAME
-graphlan_annotate \- GraPhlAn annotate module
-.SH SYNOPSIS
-.B graphlan_annotate
-[\-h] [\-\-annot annotation_file] [\-v]
-input_tree [output_tree]
-.SH DESCRIPTION
-GraPhlAn is a software tool for producing high-quality circular
-representations of taxonomic and phylogenetic trees. It focuses on
-concise, integrative, informative, and publication-ready representations
-of phylogenetically- and taxonomically-driven investigation.
-.P
-graphlan_annotate is the annotate module of graphlan(1).
-.SH OPTIONS
-.SS "positional arguments:"
-.TP
-input_tree
-the input tree in Newick, Nexus, PhyloXML or plain
-text format
-.TP
-output_tree
-the output tree in PhyloXML format containing the
-newly added annotations. If not specified, the input
-tree file will be overwritten
-.SS "optional arguments:"
-.TP
-\fB\-h\fR, \fB\-\-help\fR
-show this help message and exit
-.TP
-\fB\-\-annot\fR annotation_file
-specify the annotation file
-.TP
-\fB\-v\fR, \fB\-\-version\fR
-Prints the current GraPhlAn version and exit
-.SH SEE ALSO
-graphlan(1)
-.SH AUTHOR
-The software was written by Nicola Segata <nsegata at hsph.harvard.edu>
-.P
-This manpage was written by Andreas Tille for the Debian distribution and can be used for any other usage of the program.
diff --git a/debian/install b/debian/install
deleted file mode 100644
index 68c6da9..0000000
--- a/debian/install
+++ /dev/null
@@ -1,2 +0,0 @@
-graphlan*.py usr/share/graphlan
-src usr/share/graphlan
diff --git a/debian/links b/debian/links
deleted file mode 100644
index d262ee0..0000000
--- a/debian/links
+++ /dev/null
@@ -1,2 +0,0 @@
-usr/share/graphlan/graphlan.py usr/bin/graphlan
-usr/share/graphlan/graphlan_annotate.py usr/bin/graphlan_annotate
diff --git a/debian/manpages b/debian/manpages
deleted file mode 100644
index 0f65186..0000000
--- a/debian/manpages
+++ /dev/null
@@ -1 +0,0 @@
-debian/*.1
diff --git a/debian/rules b/debian/rules
deleted file mode 100755
index c524cf0..0000000
--- a/debian/rules
+++ /dev/null
@@ -1,17 +0,0 @@
-#!/usr/bin/make -f
-
-# DH_VERBOSE := 1
-export LC_ALL=C.UTF-8
-
-
-%:
- dh $@ --with python2
-
-override_dh_installexamples:
- dh_installexamples
- for sh in `find debian/*/usr/share/doc/*/examples -type f -name "*.sh"` ; do \
- sed -i -e 's/graphlan_annotate.py/graphlan_annotate/g' -e 's/graphlan.py/graphlan/g' $${sh} ; \
- if ! head -n1 $${sh} | grep -q '/bin/sh' ; then \
- sed -i '1i #!/bin/sh' $${sh} ; \
- fi ; \
- done
diff --git a/debian/source/format b/debian/source/format
deleted file mode 100644
index 163aaf8..0000000
--- a/debian/source/format
+++ /dev/null
@@ -1 +0,0 @@
-3.0 (quilt)
diff --git a/debian/tests/control b/debian/tests/control
deleted file mode 100644
index b0de1be..0000000
--- a/debian/tests/control
+++ /dev/null
@@ -1,3 +0,0 @@
-Tests: run-unit-test
-Depends: @, r-cran-gsl, r-cran-randomfields
-Restrictions: allow-stderr
diff --git a/debian/tests/run-unit-test b/debian/tests/run-unit-test
deleted file mode 100644
index 323c387..0000000
--- a/debian/tests/run-unit-test
+++ /dev/null
@@ -1,22 +0,0 @@
-#!/bin/sh -e
-
-pkg=graphlan
-if [ "$ADTTMP" = "" ] ; then
- ADTTMP=`mktemp -d /tmp/${pkg}-test.XXXXXX`
-fi
-cd $ADTTMP
-cp -a /usr/share/doc/${pkg}/examples/* $ADTTMP
-find . -name "*.gz" -exec gunzip \{\} \;
-for testdir in `find . -mindepth 1 -maxdepth 1 -type d` ; do
- cd $testdir
- for tscript in `ls *.sh | sort` ; do
- if grep -q export2graphlan $tscript ; then
- echo "Test script $testdir/$tscript requires export2graphlan which is not available."
- else
- echo "Running test script $testdir/$tscript ."
- sh $tscript
- fi
- done
- cd ..
-done
-rm -rf $ADTTMP/*
diff --git a/debian/watch b/debian/watch
deleted file mode 100644
index 0a63f31..0000000
--- a/debian/watch
+++ /dev/null
@@ -1,3 +0,0 @@
-version=4
-
-https://bitbucket.org/nsegata/graphlan/downloads?tab=tags .*/(\d\S*)\.tar\.gz
diff --git a/examples/DisappearingMicrobiome/DisMic.xml b/examples/DisappearingMicrobiome/DisMic.xml
new file mode 100644
index 0000000..3d95766
--- /dev/null
+++ b/examples/DisappearingMicrobiome/DisMic.xml
@@ -0,0 +1,26217 @@
+<phy:phyloxml xmlns:phy="http://www.phyloxml.org">
+ <phy:phylogeny rooted="true">
+ <phy:clade>
+ <phy:branch_length>0.0</phy:branch_length>
+ <phy:clade>
+ <phy:branch_length>0.353405776535</phy:branch_length>
+ <phy:clade>
+ <phy:branch_length>0.0966808010666</phy:branch_length>
+ <phy:clade>
+ <phy:branch_length>0.0933219288356</phy:branch_length>
+ <phy:clade>
+ <phy:branch_length>0.106144124427</phy:branch_length>
+ <phy:clade>
+ <phy:branch_length>0.150597391077</phy:branch_length>
+ <phy:clade>
+ <phy:branch_length>0.0624758318093</phy:branch_length>
+ <phy:clade>
+ <phy:branch_length>0.0671748696529</phy:branch_length>
+ <phy:clade>
+ <phy:branch_length>0.0865496463837</phy:branch_length>
+ <phy:clade>
+ <phy:branch_length>0.0676343006506</phy:branch_length>
+ <phy:clade>
+ <phy:branch_length>0.0772272109996</phy:branch_length>
+ <phy:clade>
+ <phy:branch_length>0.152101767224</phy:branch_length>
+ <phy:clade>
+ <phy:branch_length>0.418167192279</phy:branch_length>
+ <phy:clade>
+ <phy:branch_length>0.162295032936</phy:branch_length>
+ <phy:clade>
+ <phy:branch_length>0.642316960161</phy:branch_length>
+ <phy:clade>
+ <phy:branch_length>0.155646004036</phy:branch_length>
+ <phy:clade>
+ <phy:branch_length>0.140507538485</phy:branch_length>
+ <phy:clade>
+ <phy:branch_length>0.0830756570242</phy:branch_length>
+ <phy:clade>
+ <phy:branch_length>0.0772091820591</phy:branch_length>
+ <phy:clade>
+ <phy:branch_length>0.0793686173075</phy:branch_length>
+ <phy:clade>
+ <phy:branch_length>0.104700202912</phy:branch_length>
+ <phy:clade>
+ <phy:branch_length>0.0860168358131</phy:branch_length>
+ <phy:clade>
+ <phy:branch_length>0.125866553379</phy:branch_length>
+ <phy:clade>
+ <phy:branch_length>0.0887571244405</phy:branch_length>
+ <phy:clade>
+ <phy:branch_length>0.290741952487</phy:branch_length>
+ <phy:clade>
+ <phy:branch_length>0.0479727232753</phy:branch_length>
+ <phy:clade>
+ <phy:branch_length>0.0311772397711</phy:branch_length>
+ <phy:clade>
+ <phy:branch_length>0.0663240538923</phy:branch_length>
+ <phy:clade>
+ <phy:branch_length>0.136541630799</phy:branch_length>
+ <phy:clade>
+ <phy:branch_length>0.172948395892</phy:branch_length>
+ <phy:clade>
+ <phy:branch_length>0.0209285092459</phy:branch_length>
+ <phy:clade>
+ <phy:branch_length>0.032906469536</phy:branch_length>
+ <phy:clade>
+ <phy:branch_length>0.00828008819639</phy:branch_length>
+ <phy:clade>
+ <phy:name>t2507262055</phy:name>
+ <phy:branch_length>0.0219476092929</phy:branch_length>
+ </phy:clade>
+ <phy:clade>
+ <phy:name>t2508501009</phy:name>
+ <phy:branch_length>0.0107264438204</phy:branch_length>
+ </phy:clade>
+ </phy:clade>
+ <phy:clade>
+ <phy:name>t2508501042</phy:name>
+ <phy:branch_length>0.0199996828682</phy:branch_length>
+ </phy:clade>
+ </phy:clade>
+ <phy:clade>
+ <phy:name>t2508501128</phy:name>
+ <phy:branch_length>0.236889540145</phy:branch_length>
+ </phy:clade>
+ </phy:clade>
+ <phy:clade>
+ <phy:name>t2511231207</phy:name>
+ <phy:branch_length>0.0303628835051</phy:branch_length>
+ </phy:clade>
+ </phy:clade>
+ <phy:clade>
+ <phy:name>t637000038</phy:name>
+ <phy:branch_length>0.031910314864</phy:branch_length>
+ </phy:clade>
+ </phy:clade>
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+ <phy:branch_length>0.136064313713</phy:branch_length>
+ <phy:clade>
+ <phy:name>t640069318</phy:name>
+ <phy:branch_length>0.484489377983</phy:branch_length>
+ </phy:clade>
+ <phy:clade>
+ <phy:branch_length>0.10277637321</phy:branch_length>
+ <phy:clade>
+ <phy:name>t643348525</phy:name>
+ <phy:branch_length>0.482567509956</phy:branch_length>
+ </phy:clade>
+ <phy:clade>
+ <phy:name>t640753014</phy:name>
+ <phy:branch_length>0.469951213826</phy:branch_length>
+ </phy:clade>
+ </phy:clade>
+ </phy:clade>
+ <phy:clade>
+ <phy:branch_length>0.0927867072361</phy:branch_length>
+ <phy:clade>
+ <phy:name>t640069317</phy:name>
+ <phy:branch_length>0.86199260801</phy:branch_length>
+ </phy:clade>
+ <phy:clade>
+ <phy:name>t637000164</phy:name>
+ <phy:branch_length>0.660155092069</phy:branch_length>
+ </phy:clade>
+ </phy:clade>
+ </phy:clade>
+ </phy:clade>
+ </phy:clade>
+ </phy:clade>
+ </phy:clade>
+ </phy:clade>
+ </phy:clade>
+ </phy:clade>
+ </phy:phylogeny>
+</phy:phyloxml>
\ No newline at end of file
diff --git a/examples/DisappearingMicrobiome/annot.txt b/examples/DisappearingMicrobiome/annot.txt
new file mode 100644
index 0000000..3ac7c40
--- /dev/null
+++ b/examples/DisappearingMicrobiome/annot.txt
@@ -0,0 +1,18814 @@
+title PhyloPhlAn tree of life (3,737 genomes)
+title_font_size 25
+total_plotted_degrees 350
+start_rotation 90
+class_legend_font_size 12
+annotation_legend_font_size 11
+annotation_font_size 11
+branch_bracket_depth 0.0
+clade_marker_size 3.0
+annotation_background_separation -.24
+annotation_background_offset -0.21
+annotation_background_width 0.03
+Streptococcus annotation Streptococcus
+Streptococcus annotation_background_color k
+Streptococcus clade_marker_color k
+Streptococcus clade_marker_size 40
+Bacillus annotation Bacillus
+Bacillus annotation_background_color k
+Bacillus clade_marker_color k
+Bacillus clade_marker_size 40
+Escherichia annotation Escherichia
+Escherichia annotation_background_color k
+Escherichia clade_marker_color k
+Escherichia clade_marker_size 40
+Lactobacillus annotation Lactobacillus
+Lactobacillus annotation_background_color k
+Lactobacillus clade_marker_color k
+Lactobacillus clade_marker_size 40
+Staphylococcus annotation Staphylococcus
+Staphylococcus annotation_background_color k
+Staphylococcus clade_marker_color k
+Staphylococcus clade_marker_size 40
+Clostridium annotation Clostridium
+Clostridium annotation_background_color k
+Clostridium clade_marker_color k
+Clostridium clade_marker_size 40
+Burkholderia annotation Burkholderia
+Burkholderia annotation_background_color k
+Burkholderia clade_marker_color k
+Burkholderia clade_marker_size 40
+Mycobacterium annotation Mycobacterium
+Mycobacterium annotation_background_color k
+Mycobacterium clade_marker_color k
+Mycobacterium clade_marker_size 40
+Vibrio annotation Vibrio
+Vibrio annotation_background_color k
+Vibrio clade_marker_color k
+Vibrio clade_marker_size 40
+Enterococcus annotation Enterococcus
+Enterococcus annotation_background_color k
+Enterococcus clade_marker_color k
+Enterococcus clade_marker_size 40
+Pseudomonas annotation r:Pseudomonas
+Pseudomonas annotation_background_color k
+Pseudomonas clade_marker_color k
+Pseudomonas clade_marker_size 40
+Bacteroides annotation k:Bacteroides
+Bacteroides annotation_background_color k
+Bacteroides clade_marker_color k
+Bacteroides clade_marker_size 40
+Salmonella annotation Salmonella
+Salmonella annotation_background_color k
+Salmonella clade_marker_color k
+Salmonella clade_marker_size 40
+Corynebacterium annotation f:Corynebacterium
+Corynebacterium annotation_background_color k
+Corynebacterium clade_marker_color k
+Corynebacterium clade_marker_size 40
+Helicobacter annotation l:Helicobacter
+Helicobacter annotation_background_color k
+Helicobacter clade_marker_color k
+Helicobacter clade_marker_size 40
+Brucella annotation Brucella
+Brucella annotation_background_color k
+Brucella clade_marker_color k
+Brucella clade_marker_size 40
+Neisseria annotation Neisseria
+Neisseria annotation_background_color k
+Neisseria clade_marker_color k
+Neisseria clade_marker_size 40
+Rickettsia annotation Rickettsia
+Rickettsia annotation_background_color k
+Rickettsia clade_marker_color k
+Rickettsia clade_marker_size 40
+Yersinia annotation Yersinia
+Yersinia annotation_background_color k
+Yersinia clade_marker_color k
+Yersinia clade_marker_size 40
+Bifidobacterium annotation e:Bifidobacterium
+Bifidobacterium annotation_background_color k
+Bifidobacterium clade_marker_color k
+Bifidobacterium clade_marker_size 40
+Listeria annotation Listeria
+Listeria annotation_background_color k
+Listeria clade_marker_color k
+Listeria clade_marker_size 40
+Streptomyces annotation b:Streptomyces
+Streptomyces annotation_background_color k
+Streptomyces clade_marker_color k
+Streptomyces clade_marker_size 40
+Prevotella annotation Prevotella
+Prevotella annotation_background_color k
+Prevotella clade_marker_color k
+Prevotella clade_marker_size 40
+Chlamydia annotation h:Chlamydia
+Chlamydia annotation_background_color k
+Chlamydia clade_marker_color k
+Chlamydia clade_marker_size 40
+Campylobacter annotation Campylobacter
+Campylobacter annotation_background_color k
+Campylobacter clade_marker_color k
+Campylobacter clade_marker_size 40
+Haemophilus annotation t:Haemophilus
+Haemophilus annotation_background_color k
+Haemophilus clade_marker_color k
+Haemophilus clade_marker_size 40
+Acinetobacter annotation q:Acinetobacter
+Acinetobacter annotation_background_color k
+Acinetobacter clade_marker_color k
+Acinetobacter clade_marker_size 40
+Borrelia annotation j:Borrelia
+Borrelia annotation_background_color k
+Borrelia clade_marker_color k
+Borrelia clade_marker_size 40
+Shewanella annotation Shewanella
+Shewanella annotation_background_color k
+Shewanella clade_marker_color k
+Shewanella clade_marker_size 40
+Francisella annotation p:Francisella
+Francisella annotation_background_color k
+Francisella clade_marker_color k
+Francisella clade_marker_size 40
+Rhizobium annotation n:Rhizobium
+Rhizobium annotation_background_color k
+Rhizobium clade_marker_color k
+Rhizobium clade_marker_size 40
+Fusobacterium annotation a:Fusobacterium
+Fusobacterium annotation_background_color k
+Fusobacterium clade_marker_color k
+Fusobacterium clade_marker_size 40
+Actinobacillus annotation s:Actinobacillus
+Actinobacillus annotation_background_color k
+Actinobacillus clade_marker_color k
+Actinobacillus clade_marker_size 40
+Xanthomonas annotation o:Xanthomonas
+Xanthomonas annotation_background_color k
+Xanthomonas clade_marker_color k
+Xanthomonas clade_marker_size 40
+Chlamydophila annotation g:Chlamydophila
+Chlamydophila annotation_background_color k
+Chlamydophila clade_marker_color k
+Chlamydophila clade_marker_size 40
+Treponema annotation i:Treponema
+Treponema annotation_background_color k
+Treponema clade_marker_color k
+Treponema clade_marker_size 40
+Propionibacterium annotation c:Propionibacterium
+Propionibacterium annotation_background_color k
+Propionibacterium clade_marker_color k
+Propionibacterium clade_marker_size 40
+Desulfovibrio annotation Desulfovibrio
+Desulfovibrio annotation_background_color k
+Desulfovibrio clade_marker_color k
+Desulfovibrio clade_marker_size 40
+Sulfolobus annotation Sulfolobus
+Sulfolobus annotation_background_color k
+Sulfolobus clade_marker_color k
+Sulfolobus clade_marker_size 40
+Buchnera clade_marker_color k
+Buchnera clade_marker_size 40
+Actinomyces annotation d:Actinomyces
+Actinomyces annotation_background_color k
+Actinomyces clade_marker_color k
+Actinomyces clade_marker_size 40
+Prochlorococcus annotation Prochlorococcus
+Prochlorococcus annotation_background_color k
+Prochlorococcus clade_marker_color k
+Prochlorococcus clade_marker_size 40
+Acetobacter annotation m:Acetobacter
+Acetobacter annotation_background_color k
+Acetobacter clade_marker_color k
+Acetobacter clade_marker_size 40
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+Bacteroidetes annotation Bacteroidetes
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+Euryarchaeota annotation Euryarchaeota
+Euryarchaeota clade_marker_color #D15FEE
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+t645951871 clade_marker_color #8DEEEE
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+Tenericutes annotation Tenericutes
+Tenericutes clade_marker_color #8DEEEE
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+t637000315 clade_marker_color #800000
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+t651053076 clade_marker_color #800000
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+t637000329 clade_marker_color #800000
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+Cyanobacteria annotation Cyanobacteria
+Cyanobacteria clade_marker_color #800000
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+t646564513 clade_marker_color #006400
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+t641736265 clade_marker_color #006400
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+t641736177 clade_marker_color #006400
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+t642791629 clade_marker_color #006400
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+t643692010 clade_marker_color #006400
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+t639633032 clade_marker_color #006400
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+t637000150 clade_marker_color #006400
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+t637000328 clade_marker_color #006400
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+t642555166 clade_marker_color #006400
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+t2511231215 clade_marker_color #006400
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+t2511231132 clade_marker_color #006400
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+t650716101 clade_marker_color #006400
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+t649990026 clade_marker_color #006400
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+t650716102 clade_marker_color #006400
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+t2504557012 clade_marker_color #006400
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+Spirochaetes annotation Spirochaetes
+Spirochaetes clade_marker_color #006400
+Spirochaetes clade_marker_size 75
+t637000059 clade_marker_color #800080
+t637000059 clade_marker_size 30
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+t645951807 clade_marker_color #800080
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+t637000063 clade_marker_color #800080
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+t2511231082 clade_marker_color #800080
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+t644736342 clade_marker_color #800080
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+t644736343 clade_marker_color #800080
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+t646862311 clade_marker_color #800080
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+t646862316 clade_marker_color #800080
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+t651053015 clade_marker_color #800080
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+t651053016 clade_marker_color #800080
+t651053016 clade_marker_size 30
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+t651324022 clade_marker_color #800080
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+t650377922 clade_marker_color #800080
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+t647000287 clade_marker_color #800080
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+t650716071 clade_marker_color #800080
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+Chlamydiae annotation Chlamydiae
+Chlamydiae clade_marker_color #800080
+Chlamydiae clade_marker_size 75
+t650716001 clade_marker_color #808080
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+t641522611 clade_marker_color #808080
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+t651324076 clade_marker_color #808080
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+t643348540 clade_marker_color #808080
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+t640069314 clade_marker_color #808080
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+t640753029 clade_marker_color #808080
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+t648028035 clade_marker_color #808080
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+t650716051 clade_marker_color #808080
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+t640427120 clade_marker_color #808080
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+t638154513 clade_marker_color #808080
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+t640427135 clade_marker_color #808080
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+t640069326 clade_marker_color #808080
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+t639633053 clade_marker_color #808080
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+t638154517 clade_marker_color #808080
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+t646311959 clade_marker_color #808080
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+t643692044 clade_marker_color #808080
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+t643692044 ring_color 1 #808080
+t643692045 clade_marker_color #808080
+t643692045 clade_marker_size 30
+t643692045 clade_marker_edge_width 0.1
+t643692045 ring_color 1 #808080
+t643692046 clade_marker_color #808080
+t643692046 clade_marker_size 30
+t643692046 clade_marker_edge_width 0.1
+t643692046 ring_color 1 #808080
+t643692047 clade_marker_color #808080
+t643692047 clade_marker_size 30
+t643692047 clade_marker_edge_width 0.1
+t643692047 ring_color 1 #808080
+t650377982 clade_marker_color #808080
+t650377982 clade_marker_size 30
+t650377982 clade_marker_edge_width 0.1
+t650377982 ring_color 1 #808080
+t643692048 clade_marker_color #808080
+t643692048 clade_marker_size 30
+t643692048 clade_marker_edge_width 0.1
+t643692048 ring_color 1 #808080
+t643692049 clade_marker_color #808080
+t643692049 clade_marker_size 30
+t643692049 clade_marker_edge_width 0.1
+t643692049 ring_color 1 #808080
+t646862347 clade_marker_color #808080
+t646862347 clade_marker_size 30
+t646862347 clade_marker_edge_width 0.1
+t646862347 ring_color 1 #808080
+t649990020 clade_marker_color #808080
+t649990020 clade_marker_size 30
+t649990020 clade_marker_edge_width 0.1
+t649990020 ring_color 1 #808080
+t638154518 clade_marker_color #808080
+t638154518 clade_marker_size 30
+t638154518 clade_marker_edge_width 0.1
+t638154518 ring_color 1 #808080
+t638154519 clade_marker_color #808080
+t638154519 clade_marker_size 30
+t638154519 clade_marker_edge_width 0.1
+t638154519 ring_color 1 #808080
+t639633064 clade_marker_color #808080
+t639633064 clade_marker_size 30
+t639633064 clade_marker_edge_width 0.1
+t639633064 ring_color 1 #808080
+t641522657 clade_marker_color #808080
+t641522657 clade_marker_size 30
+t641522657 clade_marker_edge_width 0.1
+t641522657 ring_color 1 #808080
+t650716098 clade_marker_color #808080
+t650716098 clade_marker_size 30
+t650716098 clade_marker_edge_width 0.1
+t650716098 ring_color 1 #808080
+t646564583 clade_marker_color #808080
+t646564583 clade_marker_size 30
+t646564583 clade_marker_edge_width 0.1
+t646564583 ring_color 1 #808080
+t648028062 clade_marker_color #808080
+t648028062 clade_marker_size 30
+t648028062 clade_marker_edge_width 0.1
+t648028062 ring_color 1 #808080
+t650377985 clade_marker_color #808080
+t650377985 clade_marker_size 30
+t650377985 clade_marker_edge_width 0.1
+t650377985 ring_color 1 #808080
+Crenarchaeota annotation Crenarchaeota
+Crenarchaeota clade_marker_color #808080
+Crenarchaeota clade_marker_size 75
+t645951804 clade_marker_color #FFC0CB
+t645951804 clade_marker_size 30
+t645951804 clade_marker_edge_width 0.1
+t645951804 ring_color 1 #FFC0CB
+t646206254 clade_marker_color #FFC0CB
+t646206254 clade_marker_size 30
+t646206254 clade_marker_edge_width 0.1
+t646206254 ring_color 1 #FFC0CB
+t647000254 clade_marker_color #FFC0CB
+t647000254 clade_marker_size 30
+t647000254 clade_marker_edge_width 0.1
+t647000254 ring_color 1 #FFC0CB
+t637000117 clade_marker_color #FFC0CB
+t637000117 clade_marker_size 30
+t637000117 clade_marker_edge_width 0.1
+t637000117 ring_color 1 #FFC0CB
+t641736256 clade_marker_color #FFC0CB
+t641736256 clade_marker_size 30
+t641736256 clade_marker_edge_width 0.1
+t641736256 ring_color 1 #FFC0CB
+t638341097 clade_marker_color #FFC0CB
+t638341097 clade_marker_size 30
+t638341097 clade_marker_edge_width 0.1
+t638341097 ring_color 1 #FFC0CB
+t645951848 clade_marker_color #FFC0CB
+t645951848 clade_marker_size 30
+t645951848 clade_marker_edge_width 0.1
+t645951848 ring_color 1 #FFC0CB
+t651324032 clade_marker_color #FFC0CB
+t651324032 clade_marker_size 30
+t651324032 clade_marker_edge_width 0.1
+t651324032 ring_color 1 #FFC0CB
+t647533168 clade_marker_color #FFC0CB
+t647533168 clade_marker_size 30
+t647533168 clade_marker_edge_width 0.1
+t647533168 ring_color 1 #FFC0CB
+t651324033 clade_marker_color #FFC0CB
+t651324033 clade_marker_size 30
+t651324033 clade_marker_edge_width 0.1
+t651324033 ring_color 1 #FFC0CB
+t646206262 clade_marker_color #FFC0CB
+t646206262 clade_marker_size 30
+t646206262 clade_marker_edge_width 0.1
+t646206262 ring_color 1 #FFC0CB
+t647533169 clade_marker_color #FFC0CB
+t647533169 clade_marker_size 30
+t647533169 clade_marker_edge_width 0.1
+t647533169 ring_color 1 #FFC0CB
+t647533170 clade_marker_color #FFC0CB
+t647533170 clade_marker_size 30
+t647533170 clade_marker_edge_width 0.1
+t647533170 ring_color 1 #FFC0CB
+t647533171 clade_marker_color #FFC0CB
+t647533171 clade_marker_size 30
+t647533171 clade_marker_edge_width 0.1
+t647533171 ring_color 1 #FFC0CB
+t645951866 clade_marker_color #FFC0CB
+t645951866 clade_marker_size 30
+t645951866 clade_marker_edge_width 0.1
+t645951866 ring_color 1 #FFC0CB
+t646206253 clade_marker_color #FFC0CB
+t646206253 clade_marker_size 30
+t646206253 clade_marker_edge_width 0.1
+t646206253 ring_color 1 #FFC0CB
+t646206252 clade_marker_color #FFC0CB
+t646206252 clade_marker_size 30
+t646206252 clade_marker_edge_width 0.1
+t646206252 ring_color 1 #FFC0CB
+t645058833 clade_marker_color #FFC0CB
+t645058833 clade_marker_size 30
+t645058833 clade_marker_edge_width 0.1
+t645058833 ring_color 1 #FFC0CB
+t645951850 clade_marker_color #FFC0CB
+t645951850 clade_marker_size 30
+t645951850 clade_marker_edge_width 0.1
+t645951850 ring_color 1 #FFC0CB
+t645951859 clade_marker_color #FFC0CB
+t645951859 clade_marker_size 30
+t645951859 clade_marker_edge_width 0.1
+t645951859 ring_color 1 #FFC0CB
+t646206275 clade_marker_color #FFC0CB
+t646206275 clade_marker_size 30
+t646206275 clade_marker_edge_width 0.1
+t646206275 ring_color 1 #FFC0CB
+t649633056 clade_marker_color #FFC0CB
+t649633056 clade_marker_size 30
+t649633056 clade_marker_edge_width 0.1
+t649633056 ring_color 1 #FFC0CB
+t644736384 clade_marker_color #FFC0CB
+t644736384 clade_marker_size 30
+t644736384 clade_marker_edge_width 0.1
+t644736384 ring_color 1 #FFC0CB
+t647000268 clade_marker_color #FFC0CB
+t647000268 clade_marker_size 30
+t647000268 clade_marker_edge_width 0.1
+t647000268 ring_color 1 #FFC0CB
+t2506520045 clade_marker_color #FFC0CB
+t2506520045 clade_marker_size 30
+t2506520045 clade_marker_edge_width 0.1
+t2506520045 ring_color 1 #FFC0CB
+t645951860 clade_marker_color #FFC0CB
+t645951860 clade_marker_size 30
+t645951860 clade_marker_edge_width 0.1
+t645951860 ring_color 1 #FFC0CB
+t646311952 clade_marker_color #FFC0CB
+t646311952 clade_marker_size 30
+t646311952 clade_marker_edge_width 0.1
+t646311952 ring_color 1 #FFC0CB
+t646311956 clade_marker_color #FFC0CB
+t646311956 clade_marker_size 30
+t646311956 clade_marker_edge_width 0.1
+t646311956 ring_color 1 #FFC0CB
+Fusobacteria annotation Fusobacteria
+Fusobacteria clade_marker_color #FFC0CB
+Fusobacteria clade_marker_size 75
+t643692020 clade_marker_color #B0171F
+t643692020 clade_marker_size 30
+t643692020 clade_marker_edge_width 0.1
+t643692020 ring_color 1 #B0171F
+t641228488 clade_marker_color #B0171F
+t641228488 clade_marker_size 30
+t641228488 clade_marker_edge_width 0.1
+t641228488 ring_color 1 #B0171F
+t2509276064 clade_marker_color #B0171F
+t2509276064 clade_marker_size 30
+t2509276064 clade_marker_edge_width 0.1
+t2509276064 ring_color 1 #B0171F
+t649633034 clade_marker_color #B0171F
+t649633034 clade_marker_size 30
+t649633034 clade_marker_edge_width 0.1
+t649633034 ring_color 1 #B0171F
+t2509276065 clade_marker_color #B0171F
+t2509276065 clade_marker_size 30
+t2509276065 clade_marker_edge_width 0.1
+t2509276065 ring_color 1 #B0171F
+t2508501115 clade_marker_color #B0171F
+t2508501115 clade_marker_size 30
+t2508501115 clade_marker_edge_width 0.1
+t2508501115 ring_color 1 #B0171F
+t649633035 clade_marker_color #B0171F
+t649633035 clade_marker_size 30
+t649633035 clade_marker_edge_width 0.1
+t649633035 ring_color 1 #B0171F
+t637000092 clade_marker_color #B0171F
+t637000092 clade_marker_size 30
+t637000092 clade_marker_edge_width 0.1
+t637000092 ring_color 1 #B0171F
+t2504643006 clade_marker_color #B0171F
+t2504643006 clade_marker_size 30
+t2504643006 clade_marker_edge_width 0.1
+t2504643006 ring_color 1 #B0171F
+t2510065032 clade_marker_color #B0171F
+t2510065032 clade_marker_size 30
+t2510065032 clade_marker_edge_width 0.1
+t2510065032 ring_color 1 #B0171F
+t646564545 clade_marker_color #B0171F
+t646564545 clade_marker_size 30
+t646564545 clade_marker_edge_width 0.1
+t646564545 ring_color 1 #B0171F
+t646564546 clade_marker_color #B0171F
+t646564546 clade_marker_size 30
+t646564546 clade_marker_edge_width 0.1
+t646564546 ring_color 1 #B0171F
+t649633077 clade_marker_color #B0171F
+t649633077 clade_marker_size 30
+t649633077 clade_marker_edge_width 0.1
+t649633077 ring_color 1 #B0171F
+t645058872 clade_marker_color #B0171F
+t645058872 clade_marker_size 30
+t645058872 clade_marker_edge_width 0.1
+t645058872 ring_color 1 #B0171F
+t2508501045 clade_marker_color #B0171F
+t2508501045 clade_marker_size 30
+t2508501045 clade_marker_edge_width 0.1
+t2508501045 ring_color 1 #B0171F
+t649633105 clade_marker_color #B0171F
+t649633105 clade_marker_size 30
+t649633105 clade_marker_edge_width 0.1
+t649633105 ring_color 1 #B0171F
+t637000322 clade_marker_color #B0171F
+t637000322 clade_marker_size 30
+t637000322 clade_marker_edge_width 0.1
+t637000322 ring_color 1 #B0171F
+t637000323 clade_marker_color #B0171F
+t637000323 clade_marker_size 30
+t637000323 clade_marker_edge_width 0.1
+t637000323 ring_color 1 #B0171F
+t2508501108 clade_marker_color #B0171F
+t2508501108 clade_marker_size 30
+t2508501108 clade_marker_edge_width 0.1
+t2508501108 ring_color 1 #B0171F
+t2505679077 clade_marker_color #B0171F
+t2505679077 clade_marker_size 30
+t2505679077 clade_marker_edge_width 0.1
+t2505679077 ring_color 1 #B0171F
+t646564586 clade_marker_color #B0171F
+t646564586 clade_marker_size 30
+t646564586 clade_marker_edge_width 0.1
+t646564586 ring_color 1 #B0171F
+Thermi annotation Thermi
+Thermi clade_marker_color #B0171F
+Thermi clade_marker_size 75
+t649633005 clade_marker_color #191970
+t649633005 clade_marker_size 30
+t649633005 clade_marker_edge_width 0.1
+t649633005 ring_color 1 #191970
+t643348527 clade_marker_color #191970
+t643348527 clade_marker_size 30
+t643348527 clade_marker_edge_width 0.1
+t643348527 ring_color 1 #191970
+t641228485 clade_marker_color #191970
+t641228485 clade_marker_size 30
+t641228485 clade_marker_edge_width 0.1
+t641228485 ring_color 1 #191970
+t2506520040 clade_marker_color #191970
+t2506520040 clade_marker_size 30
+t2506520040 clade_marker_edge_width 0.1
+t2506520040 ring_color 1 #191970
+t643692015 clade_marker_color #191970
+t643692015 clade_marker_size 30
+t643692015 clade_marker_edge_width 0.1
+t643692015 ring_color 1 #191970
+t637000089 clade_marker_color #191970
+t637000089 clade_marker_size 30
+t637000089 clade_marker_edge_width 0.1
+t637000089 ring_color 1 #191970
+t640427111 clade_marker_color #191970
+t640427111 clade_marker_size 30
+t640427111 clade_marker_edge_width 0.1
+t640427111 ring_color 1 #191970
+t637000090 clade_marker_color #191970
+t637000090 clade_marker_size 30
+t637000090 clade_marker_edge_width 0.1
+t637000090 ring_color 1 #191970
+t646564526 clade_marker_color #191970
+t646564526 clade_marker_size 30
+t646564526 clade_marker_edge_width 0.1
+t646564526 ring_color 1 #191970
+t646311919 clade_marker_color #191970
+t646311919 clade_marker_size 30
+t646311919 clade_marker_edge_width 0.1
+t646311919 ring_color 1 #191970
+t648028022 clade_marker_color #191970
+t648028022 clade_marker_size 30
+t648028022 clade_marker_edge_width 0.1
+t648028022 ring_color 1 #191970
+t2508501111 clade_marker_color #191970
+t2508501111 clade_marker_size 30
+t2508501111 clade_marker_edge_width 0.1
+t2508501111 ring_color 1 #191970
+t641228494 clade_marker_color #191970
+t641228494 clade_marker_size 30
+t641228494 clade_marker_edge_width 0.1
+t641228494 ring_color 1 #191970
+t648276680 clade_marker_color #191970
+t648276680 clade_marker_size 30
+t648276680 clade_marker_edge_width 0.1
+t648276680 ring_color 1 #191970
+t649989977 clade_marker_color #191970
+t649989977 clade_marker_size 30
+t649989977 clade_marker_edge_width 0.1
+t649989977 ring_color 1 #191970
+t640753047 clade_marker_color #191970
+t640753047 clade_marker_size 30
+t640753047 clade_marker_edge_width 0.1
+t640753047 ring_color 1 #191970
+t640427139 clade_marker_color #191970
+t640427139 clade_marker_size 30
+t640427139 clade_marker_edge_width 0.1
+t640427139 ring_color 1 #191970
+t646311953 clade_marker_color #191970
+t646311953 clade_marker_size 30
+t646311953 clade_marker_edge_width 0.1
+t646311953 ring_color 1 #191970
+t646311962 clade_marker_color #191970
+t646311962 clade_marker_size 30
+t646311962 clade_marker_edge_width 0.1
+t646311962 ring_color 1 #191970
+t643348582 clade_marker_color #191970
+t643348582 clade_marker_size 30
+t643348582 clade_marker_edge_width 0.1
+t643348582 ring_color 1 #191970
+Chloroflexi annotation Chloroflexi
+Chloroflexi clade_marker_color #191970
+Chloroflexi clade_marker_size 75
+t640753026 clade_marker_color #7B68EE
+t640753026 clade_marker_size 30
+t640753026 clade_marker_edge_width 0.1
+t640753026 ring_color 1 #7B68EE
+t2507149014 clade_marker_color #7B68EE
+t2507149014 clade_marker_size 30
+t2507149014 clade_marker_edge_width 0.1
+t2507149014 ring_color 1 #7B68EE
+t644736379 clade_marker_color #7B68EE
+t644736379 clade_marker_size 30
+t644736379 clade_marker_edge_width 0.1
+t644736379 ring_color 1 #7B68EE
+t647533182 clade_marker_color #7B68EE
+t647533182 clade_marker_size 30
+t647533182 clade_marker_edge_width 0.1
+t647533182 ring_color 1 #7B68EE
+t2508501120 clade_marker_color #7B68EE
+t2508501120 clade_marker_size 30
+t2508501120 clade_marker_edge_width 0.1
+t2508501120 ring_color 1 #7B68EE
+t641228500 clade_marker_color #7B68EE
+t641228500 clade_marker_size 30
+t641228500 clade_marker_edge_width 0.1
+t641228500 ring_color 1 #7B68EE
+t643348583 clade_marker_color #7B68EE
+t643348583 clade_marker_size 30
+t643348583 clade_marker_edge_width 0.1
+t643348583 ring_color 1 #7B68EE
+t640753057 clade_marker_color #7B68EE
+t640753057 clade_marker_size 30
+t640753057 clade_marker_edge_width 0.1
+t640753057 ring_color 1 #7B68EE
+t641228511 clade_marker_color #7B68EE
+t641228511 clade_marker_size 30
+t641228511 clade_marker_edge_width 0.1
+t641228511 ring_color 1 #7B68EE
+t637000321 clade_marker_color #7B68EE
+t637000321 clade_marker_size 30
+t637000321 clade_marker_edge_width 0.1
+t637000321 ring_color 1 #7B68EE
+t2506783065 clade_marker_color #7B68EE
+t2506783065 clade_marker_size 30
+t2506783065 clade_marker_edge_width 0.1
+t2506783065 ring_color 1 #7B68EE
+t646311964 clade_marker_color #7B68EE
+t646311964 clade_marker_size 30
+t646311964 clade_marker_edge_width 0.1
+t646311964 ring_color 1 #7B68EE
+t643348584 clade_marker_color #7B68EE
+t643348584 clade_marker_size 30
+t643348584 clade_marker_edge_width 0.1
+t643348584 ring_color 1 #7B68EE
+t640427150 clade_marker_color #7B68EE
+t640427150 clade_marker_size 30
+t640427150 clade_marker_edge_width 0.1
+t640427150 ring_color 1 #7B68EE
+t642487181 clade_marker_color #7B68EE
+t642487181 clade_marker_size 30
+t642487181 clade_marker_edge_width 0.1
+t642487181 ring_color 1 #7B68EE
+t2503508007 clade_marker_color #7B68EE
+t2503508007 clade_marker_size 30
+t2503508007 clade_marker_edge_width 0.1
+t2503508007 ring_color 1 #7B68EE
+t2510065086 clade_marker_color #7B68EE
+t2510065086 clade_marker_size 30
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+t2510065086 ring_color 1 #7B68EE
+t648276752 clade_marker_color #7B68EE
+t648276752 clade_marker_size 30
+t648276752 clade_marker_edge_width 0.1
+t648276752 ring_color 1 #7B68EE
+Thermotogae annotation Thermotogae
+Thermotogae clade_marker_color #7B68EE
+Thermotogae clade_marker_size 75
+t637000010 clade_marker_color #00CD00
+t637000010 clade_marker_size 30
+t637000010 clade_marker_edge_width 0.1
+t637000010 ring_color 1 #00CD00
+t649633039 clade_marker_color #00CD00
+t649633039 clade_marker_size 30
+t649633039 clade_marker_edge_width 0.1
+t649633039 ring_color 1 #00CD00
+t641380441 clade_marker_color #00CD00
+t641380441 clade_marker_size 30
+t641380441 clade_marker_edge_width 0.1
+t641380441 ring_color 1 #00CD00
+t650377953 clade_marker_color #00CD00
+t650377953 clade_marker_size 30
+t650377953 clade_marker_edge_width 0.1
+t650377953 ring_color 1 #00CD00
+t646311936 clade_marker_color #00CD00
+t646311936 clade_marker_size 30
+t646311936 clade_marker_edge_width 0.1
+t646311936 ring_color 1 #00CD00
+t2507262044 clade_marker_color #00CD00
+t2507262044 clade_marker_size 30
+t2507262044 clade_marker_edge_width 0.1
+t2507262044 ring_color 1 #00CD00
+t647000261 clade_marker_color #00CD00
+t647000261 clade_marker_size 30
+t647000261 clade_marker_edge_width 0.1
+t647000261 ring_color 1 #00CD00
+t642555132 clade_marker_color #00CD00
+t642555132 clade_marker_size 30
+t642555132 clade_marker_edge_width 0.1
+t642555132 ring_color 1 #00CD00
+t643692030 clade_marker_color #00CD00
+t643692030 clade_marker_size 30
+t643692030 clade_marker_edge_width 0.1
+t643692030 ring_color 1 #00CD00
+t643692050 clade_marker_color #00CD00
+t643692050 clade_marker_size 30
+t643692050 clade_marker_edge_width 0.1
+t643692050 ring_color 1 #00CD00
+t642555165 clade_marker_color #00CD00
+t642555165 clade_marker_size 30
+t642555165 clade_marker_edge_width 0.1
+t642555165 ring_color 1 #00CD00
+t645058708 clade_marker_color #00CD00
+t645058708 clade_marker_size 30
+t645058708 clade_marker_edge_width 0.1
+t645058708 ring_color 1 #00CD00
+t646564582 clade_marker_color #00CD00
+t646564582 clade_marker_size 30
+t646564582 clade_marker_edge_width 0.1
+t646564582 ring_color 1 #00CD00
+t2511231037 clade_marker_color #00CD00
+t2511231037 clade_marker_size 30
+t2511231037 clade_marker_edge_width 0.1
+t2511231037 ring_color 1 #00CD00
+t2512875013 clade_marker_color #00CD00
+t2512875013 clade_marker_size 30
+t2512875013 clade_marker_edge_width 0.1
+t2512875013 ring_color 1 #00CD00
+t649633104 clade_marker_color #00CD00
+t649633104 clade_marker_size 30
+t649633104 clade_marker_edge_width 0.1
+t649633104 ring_color 1 #00CD00
+Aquificae annotation Aquificae
+Aquificae clade_marker_color #00CD00
+Aquificae clade_marker_size 75
+t646564503 clade_marker_color #8B4513
+t646564503 clade_marker_size 30
+t646564503 clade_marker_edge_width 0.1
+t646564503 ring_color 1 #8B4513
+t2502790015 clade_marker_color #8B4513
+t2502790015 clade_marker_size 30
+t2502790015 clade_marker_edge_width 0.1
+t2502790015 ring_color 1 #8B4513
+t647000209 clade_marker_color #8B4513
+t647000209 clade_marker_size 30
+t647000209 clade_marker_edge_width 0.1
+t647000209 ring_color 1 #8B4513
+t2509601011 clade_marker_color #8B4513
+t2509601011 clade_marker_size 30
+t2509601011 clade_marker_edge_width 0.1
+t2509601011 ring_color 1 #8B4513
+t2510065052 clade_marker_color #8B4513
+t2510065052 clade_marker_size 30
+t2510065052 clade_marker_edge_width 0.1
+t2510065052 ring_color 1 #8B4513
+t2501533205 clade_marker_color #8B4513
+t2501533205 clade_marker_size 30
+t2501533205 clade_marker_edge_width 0.1
+t2501533205 ring_color 1 #8B4513
+t2508501103 clade_marker_color #8B4513
+t2508501103 clade_marker_size 30
+t2508501103 clade_marker_edge_width 0.1
+t2508501103 ring_color 1 #8B4513
+t645951855 clade_marker_color #8B4513
+t645951855 clade_marker_size 30
+t645951855 clade_marker_edge_width 0.1
+t645951855 ring_color 1 #8B4513
+t647000302 clade_marker_color #8B4513
+t647000302 clade_marker_size 30
+t647000302 clade_marker_edge_width 0.1
+t647000302 ring_color 1 #8B4513
+t650377983 clade_marker_color #8B4513
+t650377983 clade_marker_size 30
+t650377983 clade_marker_edge_width 0.1
+t650377983 ring_color 1 #8B4513
+t646311961 clade_marker_color #8B4513
+t646311961 clade_marker_size 30
+t646311961 clade_marker_edge_width 0.1
+t646311961 ring_color 1 #8B4513
+t2508501068 clade_marker_color #8B4513
+t2508501068 clade_marker_size 30
+t2508501068 clade_marker_edge_width 0.1
+t2508501068 ring_color 1 #8B4513
+t2505119043 clade_marker_color #8B4513
+t2505119043 clade_marker_size 30
+t2505119043 clade_marker_edge_width 0.1
+t2505119043 ring_color 1 #8B4513
+Synergistetes annotation Synergistetes
+Synergistetes clade_marker_color #8B4513
+Synergistetes clade_marker_size 75
+t642555120 clade_marker_color #BC8F8F
+t642555120 clade_marker_size 30
+t642555120 clade_marker_edge_width 0.1
+t642555120 ring_color 1 #BC8F8F
+t637000072 clade_marker_color #BC8F8F
+t637000072 clade_marker_size 30
+t637000072 clade_marker_edge_width 0.1
+t637000072 ring_color 1 #BC8F8F
+t638341060 clade_marker_color #BC8F8F
+t638341060 clade_marker_size 30
+t638341060 clade_marker_edge_width 0.1
+t638341060 ring_color 1 #BC8F8F
+t642555121 clade_marker_color #BC8F8F
+t642555121 clade_marker_size 30
+t642555121 clade_marker_edge_width 0.1
+t642555121 ring_color 1 #BC8F8F
+t642555122 clade_marker_color #BC8F8F
+t642555122 clade_marker_size 30
+t642555122 clade_marker_edge_width 0.1
+t642555122 ring_color 1 #BC8F8F
+t639633020 clade_marker_color #BC8F8F
+t639633020 clade_marker_size 30
+t639633020 clade_marker_edge_width 0.1
+t639633020 ring_color 1 #BC8F8F
+t640427130 clade_marker_color #BC8F8F
+t640427130 clade_marker_size 30
+t640427130 clade_marker_edge_width 0.1
+t640427130 ring_color 1 #BC8F8F
+t637000073 clade_marker_color #BC8F8F
+t637000073 clade_marker_size 30
+t637000073 clade_marker_edge_width 0.1
+t637000073 ring_color 1 #BC8F8F
+t642555123 clade_marker_color #BC8F8F
+t642555123 clade_marker_size 30
+t642555123 clade_marker_edge_width 0.1
+t642555123 ring_color 1 #BC8F8F
+t637000205 clade_marker_color #BC8F8F
+t637000205 clade_marker_size 30
+t637000205 clade_marker_edge_width 0.1
+t637000205 ring_color 1 #BC8F8F
+t642555146 clade_marker_color #BC8F8F
+t642555146 clade_marker_size 30
+t642555146 clade_marker_edge_width 0.1
+t642555146 ring_color 1 #BC8F8F
+t642555149 clade_marker_color #BC8F8F
+t642555149 clade_marker_size 30
+t642555149 clade_marker_edge_width 0.1
+t642555149 ring_color 1 #BC8F8F
+Chlorobi annotation Chlorobi
+Chlorobi clade_marker_color #BC8F8F
+Chlorobi clade_marker_size 75
+t642555104 clade_marker_color #303030
+t642555104 clade_marker_size 30
+t642555104 clade_marker_edge_width 0.1
+t642555104 ring_color 1 #303030
+t642791618 clade_marker_color #303030
+t642791618 clade_marker_size 30
+t642791618 clade_marker_edge_width 0.1
+t642791618 ring_color 1 #303030
+t646564524 clade_marker_color #303030
+t646564524 clade_marker_size 30
+t646564524 clade_marker_edge_width 0.1
+t646564524 ring_color 1 #303030
+t642555138 clade_marker_color #303030
+t642555138 clade_marker_size 30
+t642555138 clade_marker_edge_width 0.1
+t642555138 ring_color 1 #303030
+t2508501067 clade_marker_color #303030
+t2508501067 clade_marker_size 30
+t2508501067 clade_marker_edge_width 0.1
+t2508501067 ring_color 1 #303030
+t640963002 clade_marker_color #303030
+t640963002 clade_marker_size 30
+t640963002 clade_marker_edge_width 0.1
+t640963002 ring_color 1 #303030
+t2510065049 clade_marker_color #303030
+t2510065049 clade_marker_size 30
+t2510065049 clade_marker_edge_width 0.1
+t2510065049 ring_color 1 #303030
+t641522643 clade_marker_color #303030
+t641522643 clade_marker_size 30
+t641522643 clade_marker_edge_width 0.1
+t641522643 ring_color 1 #303030
+t645058870 clade_marker_color #303030
+t645058870 clade_marker_size 30
+t645058870 clade_marker_edge_width 0.1
+t645058870 ring_color 1 #303030
+t647533243 clade_marker_color #303030
+t647533243 clade_marker_size 30
+t647533243 clade_marker_edge_width 0.1
+t647533243 ring_color 1 #303030
+t641736179 clade_marker_color #303030
+t641736179 clade_marker_size 30
+t641736179 clade_marker_edge_width 0.1
+t641736179 ring_color 1 #303030
+Verrucomicrobia annotation Verrucomicrobia
+Verrucomicrobia clade_marker_color #303030
+Verrucomicrobia clade_marker_size 75
+t638341020 clade_marker_color #8E8E38
+t638341020 clade_marker_size 30
+t638341020 clade_marker_edge_width 0.1
+t638341020 ring_color 1 #8E8E38
+t642555116 clade_marker_color #8E8E38
+t642555116 clade_marker_size 30
+t642555116 clade_marker_edge_width 0.1
+t642555116 ring_color 1 #8E8E38
+t641736268 clade_marker_color #8E8E38
+t641736268 clade_marker_size 30
+t641736268 clade_marker_edge_width 0.1
+t641736268 ring_color 1 #8E8E38
+t649633058 clade_marker_color #8E8E38
+t649633058 clade_marker_size 30
+t649633058 clade_marker_edge_width 0.1
+t649633058 ring_color 1 #8E8E38
+t646311948 clade_marker_color #8E8E38
+t646311948 clade_marker_size 30
+t646311948 clade_marker_edge_width 0.1
+t646311948 ring_color 1 #8E8E38
+t649633083 clade_marker_color #8E8E38
+t649633083 clade_marker_size 30
+t649633083 clade_marker_edge_width 0.1
+t649633083 ring_color 1 #8E8E38
+t646564559 clade_marker_color #8E8E38
+t646564559 clade_marker_size 30
+t646564559 clade_marker_edge_width 0.1
+t646564559 ring_color 1 #8E8E38
+t640963032 clade_marker_color #8E8E38
+t640963032 clade_marker_size 30
+t640963032 clade_marker_edge_width 0.1
+t640963032 ring_color 1 #8E8E38
+t637000236 clade_marker_color #8E8E38
+t637000236 clade_marker_size 30
+t637000236 clade_marker_edge_width 0.1
+t637000236 ring_color 1 #8E8E38
+t2509601004 clade_marker_color #8E8E38
+t2509601004 clade_marker_size 30
+t2509601004 clade_marker_edge_width 0.1
+t2509601004 ring_color 1 #8E8E38
+Planctomycetes annotation Planctomycetes
+Planctomycetes clade_marker_color #8E8E38
+Planctomycetes clade_marker_size 75
+t643692001 clade_marker_color #CDCDC1
+t643692001 clade_marker_size 30
+t643692001 clade_marker_edge_width 0.1
+t643692001 ring_color 1 #CDCDC1
+t2512047033 clade_marker_color #CDCDC1
+t2512047033 clade_marker_size 30
+t2512047033 clade_marker_edge_width 0.1
+t2512047033 ring_color 1 #CDCDC1
+t648276601 clade_marker_color #CDCDC1
+t648276601 clade_marker_size 30
+t648276601 clade_marker_edge_width 0.1
+t648276601 ring_color 1 #CDCDC1
+t649633002 clade_marker_color #CDCDC1
+t649633002 clade_marker_size 30
+t649633002 clade_marker_edge_width 0.1
+t649633002 ring_color 1 #CDCDC1
+t2509601028 clade_marker_color #CDCDC1
+t2509601028 clade_marker_size 30
+t2509601028 clade_marker_edge_width 0.1
+t2509601028 ring_color 1 #CDCDC1
+t637000001 clade_marker_color #CDCDC1
+t637000001 clade_marker_size 30
+t637000001 clade_marker_edge_width 0.1
+t637000001 ring_color 1 #CDCDC1
+t639633060 clade_marker_color #CDCDC1
+t639633060 clade_marker_size 30
+t639633060 clade_marker_edge_width 0.1
+t639633060 ring_color 1 #CDCDC1
+t2510461070 clade_marker_color #CDCDC1
+t2510461070 clade_marker_size 30
+t2510461070 clade_marker_edge_width 0.1
+t2510461070 ring_color 1 #CDCDC1
+t649633100 clade_marker_color #CDCDC1
+t649633100 clade_marker_size 30
+t649633100 clade_marker_edge_width 0.1
+t649633100 ring_color 1 #CDCDC1
+Acidobacteria annotation Acidobacteria
+Acidobacteria clade_marker_color #CDCDC1
+Acidobacteria clade_marker_size 75
+Other annotation Other
+Other clade_marker_color k
+Other clade_marker_size 75
diff --git a/examples/DisappearingMicrobiome/genomes.all.txt b/examples/DisappearingMicrobiome/genomes.all.txt
new file mode 100644
index 0000000..0c110db
--- /dev/null
+++ b/examples/DisappearingMicrobiome/genomes.all.txt
@@ -0,0 +1,3739 @@
+t643692001 d__Bacteria.p__Acidobacteria.c__Acidobacteria.o__Acidobacteriales.f__Acidobacteriaceae.g__Acidobacterium.s__capsulatum.t__ATCC_51196
+t648276601 d__Bacteria.p__Acidobacteria.c__Acidobacteria.o__Acidobacteriales.f__Acidobacteriaceae.g__Granulicella.s__sp_.t__MP5ACTX8
+t649633002 d__Bacteria.p__Acidobacteria.c__Acidobacteria.o__Acidobacteriales.f__Acidobacteriaceae.g__Granulicella.s__sp_.t__MP5ACTX9
+t649633100 d__Bacteria.p__Acidobacteria.c__Acidobacteria.o__Acidobacteriales.f__Acidobacteriaceae.g__Terriglobus.s__saanensis.t__SP1PR4
+t637000001 d__Bacteria.p__Acidobacteria.c__Acidobacteria.o__Acidobacteriales.f__Korebacteraceae.g__Korebacter.s__versatilis.t__Ellin345
+t639633060 d__Bacteria.p__Acidobacteria.c__Solibacteres.o__Solibacterales.f__Solibacteraceae.g__Solibacter.s__usitatus.t__Ellin6076
+t644736322 d__Bacteria.p__Actinobacteria.c__Actinobacteria.o__Acidimicrobiales.f__Acidimicrobiaceae.g__Acidimicrobium.s__ferrooxidans.t__ICP__DSM_10331
+t639633001 d__Bacteria.p__Actinobacteria.c__Actinobacteria.o__Actinomycetales.f__Acidothermaceae.g__Acidothermus.s__cellulolyticus.t__11B
+t643886017 d__Bacteria.p__Actinobacteria.c__Actinobacteria.o__Actinomycetales.f__Actinomycetaceae.g__Actinomyces.s__coleocanis.t__DSM_15436
+t640963058 d__Bacteria.p__Actinobacteria.c__Actinobacteria.o__Actinomycetales.f__Actinomycetaceae.g__Actinomyces.s__odontolyticus.t__ATCC_17982
+t647000206 d__Bacteria.p__Actinobacteria.c__Actinobacteria.o__Actinomycetales.f__Actinomycetaceae.g__Actinomyces.s__odontolyticus.t__F0309
+t649989901 d__Bacteria.p__Actinobacteria.c__Actinobacteria.o__Actinomycetales.f__Actinomycetaceae.g__Actinomyces.s__oris.t__K20
+t651324005 d__Bacteria.p__Actinobacteria.c__Actinobacteria.o__Actinomycetales.f__Actinomycetaceae.g__Actinomyces.s__sp_.t__oral_taxon_170_str__F0386
+t649989902 d__Bacteria.p__Actinobacteria.c__Actinobacteria.o__Actinomycetales.f__Actinomycetaceae.g__Actinomyces.s__sp_.t__oral_taxon_171_str__F0337
+t649989903 d__Bacteria.p__Actinobacteria.c__Actinobacteria.o__Actinomycetales.f__Actinomycetaceae.g__Actinomyces.s__sp_.t__oral_taxon_178_str__F0338
+t649989904 d__Bacteria.p__Actinobacteria.c__Actinobacteria.o__Actinomycetales.f__Actinomycetaceae.g__Actinomyces.s__sp_.t__oral_taxon_180_str__F0310
+t651324006 d__Bacteria.p__Actinobacteria.c__Actinobacteria.o__Actinomycetales.f__Actinomycetaceae.g__Actinomyces.s__sp_.t__oral_taxon_448_str__F0400
+t645951824 d__Bacteria.p__Actinobacteria.c__Actinobacteria.o__Actinomycetales.f__Actinomycetaceae.g__Actinomyces.s__sp_.t__oral_taxon_848_str__F0332
+t643886015 d__Bacteria.p__Actinobacteria.c__Actinobacteria.o__Actinomycetales.f__Actinomycetaceae.g__Actinomyces.s__urogenitalis.t__DSM_15434
+t649989905 d__Bacteria.p__Actinobacteria.c__Actinobacteria.o__Actinomycetales.f__Actinomycetaceae.g__Actinomyces.s__viscosus.t__C505
+t646564505 d__Bacteria.p__Actinobacteria.c__Actinobacteria.o__Actinomycetales.f__Actinomycetaceae.g__Arcanobacterium.s__haemolyticum.t__DSM_20595
+t648028043 d__Bacteria.p__Actinobacteria.c__Actinobacteria.o__Actinomycetales.f__Actinomycetaceae.g__Mobiluncus.s__curtisii.t__ATCC_43063
+t649989973 d__Bacteria.p__Actinobacteria.c__Actinobacteria.o__Actinomycetales.f__Actinomycetaceae.g__Mobiluncus.s__curtisii.t__ATCC_51333
+t648276689 d__Bacteria.p__Actinobacteria.c__Actinobacteria.o__Actinomycetales.f__Actinomycetaceae.g__Mobiluncus.s__curtisii.t__subsp__curtisii_ATCC_35241
+t649989974 d__Bacteria.p__Actinobacteria.c__Actinobacteria.o__Actinomycetales.f__Actinomycetaceae.g__Mobiluncus.s__curtisii.t__subsp__holmesii_ATCC_35242
+t647000277 d__Bacteria.p__Actinobacteria.c__Actinobacteria.o__Actinomycetales.f__Actinomycetaceae.g__Mobiluncus.s__mulieris.t__28_1
+t648276690 d__Bacteria.p__Actinobacteria.c__Actinobacteria.o__Actinomycetales.f__Actinomycetaceae.g__Mobiluncus.s__mulieris.t__ATCC_35239
+t643886108 d__Bacteria.p__Actinobacteria.c__Actinobacteria.o__Actinomycetales.f__Actinomycetaceae.g__Mobiluncus.s__mulieris.t__ATCC_35243
+t648276691 d__Bacteria.p__Actinobacteria.c__Actinobacteria.o__Actinomycetales.f__Actinomycetaceae.g__Mobiluncus.s__mulieris.t__FB024_16
+t644736323 d__Bacteria.p__Actinobacteria.c__Actinobacteria.o__Actinomycetales.f__Actinosynnemataceae.g__Actinosynnema.s__mirum.t__101__DSM_43827
+t643692008 d__Bacteria.p__Actinobacteria.c__Actinobacteria.o__Actinomycetales.f__Beutenbergiaceae.g__Beutenbergia.s__cavernae.t__DSM_12333
+t638341022 d__Bacteria.p__Actinobacteria.c__Actinobacteria.o__Actinomycetales.f__Brevibacteriaceae.g__Brevibacterium.s__linens.t__BL2
+t647000216 d__Bacteria.p__Actinobacteria.c__Actinobacteria.o__Actinomycetales.f__Brevibacteriaceae.g__Brevibacterium.s__mcbrellneri.t__ATCC_49030
+t644736339 d__Bacteria.p__Actinobacteria.c__Actinobacteria.o__Actinomycetales.f__Catenulisporaceae.g__Catenulispora.s__acidiphila.t__ID139908__DSM_44928
+t646564520 d__Bacteria.p__Actinobacteria.c__Actinobacteria.o__Actinomycetales.f__Cellulomonadaceae.g__Cellulomonas.s__flavigena.t__DSM_20109
+t643886058 d__Bacteria.p__Actinobacteria.c__Actinobacteria.o__Actinomycetales.f__Corynebacteriaceae.g__Corynebacterium.s__accolens.t__ATCC_49725
+t648276632 d__Bacteria.p__Actinobacteria.c__Actinobacteria.o__Actinomycetales.f__Corynebacteriaceae.g__Corynebacterium.s__accolens.t__ATCC_49726
+t647000230 d__Bacteria.p__Actinobacteria.c__Actinobacteria.o__Actinomycetales.f__Corynebacteriaceae.g__Corynebacterium.s__ammoniagenes.t__DSM_20306
+t642979306 d__Bacteria.p__Actinobacteria.c__Actinobacteria.o__Actinomycetales.f__Corynebacteriaceae.g__Corynebacterium.s__amycolatum.t__SK46
+t643692018 d__Bacteria.p__Actinobacteria.c__Actinobacteria.o__Actinomycetales.f__Corynebacteriaceae.g__Corynebacterium.s__aurimucosum.t__ATCC_700975
+t645951870 d__Bacteria.p__Actinobacteria.c__Actinobacteria.o__Actinomycetales.f__Corynebacteriaceae.g__Corynebacterium.s__aurimucosum.t__ATCC_700975
+t651324023 d__Bacteria.p__Actinobacteria.c__Actinobacteria.o__Actinomycetales.f__Corynebacteriaceae.g__Corynebacterium.s__bovis.t__DSM_20582
+t637000082 d__Bacteria.p__Actinobacteria.c__Actinobacteria.o__Actinomycetales.f__Corynebacteriaceae.g__Corynebacterium.s__diphtheriae.t__NCTC_13129
+t644736345 d__Bacteria.p__Actinobacteria.c__Actinobacteria.o__Actinomycetales.f__Corynebacteriaceae.g__Corynebacterium.s__efficiens.t__YS_314
+t645951842 d__Bacteria.p__Actinobacteria.c__Actinobacteria.o__Actinomycetales.f__Corynebacteriaceae.g__Corynebacterium.s__efficiens.t__YS_314
+t648276633 d__Bacteria.p__Actinobacteria.c__Actinobacteria.o__Actinomycetales.f__Corynebacteriaceae.g__Corynebacterium.s__genitalium.t__ATCC_33030
+t643886137 d__Bacteria.p__Actinobacteria.c__Actinobacteria.o__Actinomycetales.f__Corynebacteriaceae.g__Corynebacterium.s__glucuronolyticum.t__ATCC_51866
+t643886147 d__Bacteria.p__Actinobacteria.c__Actinobacteria.o__Actinomycetales.f__Corynebacteriaceae.g__Corynebacterium.s__glucuronolyticum.t__ATCC_51867
+t639279306 d__Bacteria.p__Actinobacteria.c__Actinobacteria.o__Actinomycetales.f__Corynebacteriaceae.g__Corynebacterium.s__glutamicum.t__ATCC_13032__Bielefeld_
+t639279307 d__Bacteria.p__Actinobacteria.c__Actinobacteria.o__Actinomycetales.f__Corynebacteriaceae.g__Corynebacterium.s__glutamicum.t__ATCC_13032__Kitasato_
+t640427110 d__Bacteria.p__Actinobacteria.c__Actinobacteria.o__Actinomycetales.f__Corynebacteriaceae.g__Corynebacterium.s__glutamicum.t__R
+t647000231 d__Bacteria.p__Actinobacteria.c__Actinobacteria.o__Actinomycetales.f__Corynebacteriaceae.g__Corynebacterium.s__jeikeium.t__ATCC_43734
+t637000085 d__Bacteria.p__Actinobacteria.c__Actinobacteria.o__Actinomycetales.f__Corynebacteriaceae.g__Corynebacterium.s__jeikeium.t__K411
+t643692019 d__Bacteria.p__Actinobacteria.c__Actinobacteria.o__Actinomycetales.f__Corynebacteriaceae.g__Corynebacterium.s__kroppenstedtii.t__DSM_44385
+t643886002 d__Bacteria.p__Actinobacteria.c__Actinobacteria.o__Actinomycetales.f__Corynebacteriaceae.g__Corynebacterium.s__lipophiloflavum.t__DSM_44291
+t648276634 d__Bacteria.p__Actinobacteria.c__Actinobacteria.o__Actinomycetales.f__Corynebacteriaceae.g__Corynebacterium.s__matruchotii.t__ATCC_14266
+t643886207 d__Bacteria.p__Actinobacteria.c__Actinobacteria.o__Actinomycetales.f__Corynebacteriaceae.g__Corynebacterium.s__matruchotii.t__ATCC_33806
+t643886084 d__Bacteria.p__Actinobacteria.c__Actinobacteria.o__Actinomycetales.f__Corynebacteriaceae.g__Corynebacterium.s__pseudogenitalium.t__ATCC_33035
+t648231702 d__Bacteria.p__Actinobacteria.c__Actinobacteria.o__Actinomycetales.f__Corynebacteriaceae.g__Corynebacterium.s__pseudotuberculosis.t__1002
+t648231703 d__Bacteria.p__Actinobacteria.c__Actinobacteria.o__Actinomycetales.f__Corynebacteriaceae.g__Corynebacterium.s__pseudotuberculosis.t__C231
+t648028019 d__Bacteria.p__Actinobacteria.c__Actinobacteria.o__Actinomycetales.f__Corynebacteriaceae.g__Corynebacterium.s__pseudotuberculosis.t__FRC41
+t650377927 d__Bacteria.p__Actinobacteria.c__Actinobacteria.o__Actinomycetales.f__Corynebacteriaceae.g__Corynebacterium.s__pseudotuberculosis.t__I19
+t650716029 d__Bacteria.p__Actinobacteria.c__Actinobacteria.o__Actinomycetales.f__Corynebacteriaceae.g__Corynebacterium.s__resistens.t__DSM_45100
+t643886057 d__Bacteria.p__Actinobacteria.c__Actinobacteria.o__Actinomycetales.f__Corynebacteriaceae.g__Corynebacterium.s__striatum.t__ATCC_6940
+t645058719 d__Bacteria.p__Actinobacteria.c__Actinobacteria.o__Actinomycetales.f__Corynebacteriaceae.g__Corynebacterium.s__tuberculostearicum.t__SK141
+t651053019 d__Bacteria.p__Actinobacteria.c__Actinobacteria.o__Actinomycetales.f__Corynebacteriaceae.g__Corynebacterium.s__ulcerans.t__809
+t650716030 d__Bacteria.p__Actinobacteria.c__Actinobacteria.o__Actinomycetales.f__Corynebacteriaceae.g__Corynebacterium.s__ulcerans.t__BR_AD22
+t641522620 d__Bacteria.p__Actinobacteria.c__Actinobacteria.o__Actinomycetales.f__Corynebacteriaceae.g__Corynebacterium.s__urealyticum.t__DSM_7109
+t649989925 d__Bacteria.p__Actinobacteria.c__Actinobacteria.o__Actinomycetales.f__Corynebacteriaceae.g__Corynebacterium.s__variabile.t__DSM_44702
+t644736331 d__Bacteria.p__Actinobacteria.c__Actinobacteria.o__Actinomycetales.f__Dermabacteraceae.g__Brachybacterium.s__faecium.t__DSM_4810
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+t651053046 d__Bacteria.p__Tenericutes.c__Mollicutes.o__Mycoplasmatales.f__Mycoplasmataceae.g__Mycoplasma.s__leachii.t__99_014_6
+t649633074 d__Bacteria.p__Tenericutes.c__Mollicutes.o__Mycoplasmatales.f__Mycoplasmataceae.g__Mycoplasma.s__leachii.t__PG50
+t637000180 d__Bacteria.p__Tenericutes.c__Mollicutes.o__Mycoplasmatales.f__Mycoplasmataceae.g__Mycoplasma.s__mobile.t__163K
+t650716063 d__Bacteria.p__Tenericutes.c__Mollicutes.o__Mycoplasmatales.f__Mycoplasmataceae.g__Mycoplasma.s__mycoides.t__subsp__capri_LC_str__95010
+t646862335 d__Bacteria.p__Tenericutes.c__Mollicutes.o__Mycoplasmatales.f__Mycoplasmataceae.g__Mycoplasma.s__mycoides.t__subsp__capri_str__GM12_clone_deltatypeIIIres_
+t646862336 d__Bacteria.p__Tenericutes.c__Mollicutes.o__Mycoplasmatales.f__Mycoplasmataceae.g__Mycoplasma.s__mycoides.t__subsp__capri_str__GM12_transgenic_clone_tetM_lacZ_
+t648231714 d__Bacteria.p__Tenericutes.c__Mollicutes.o__Mycoplasmatales.f__Mycoplasmataceae.g__Mycoplasma.s__mycoides.t__subsp__mycoides_SC_str__Gladysdale
+t637000181 d__Bacteria.p__Tenericutes.c__Mollicutes.o__Mycoplasmatales.f__Mycoplasmataceae.g__Mycoplasma.s__mycoides.t__subsp__mycoides_SC_str__PG1
+t637000182 d__Bacteria.p__Tenericutes.c__Mollicutes.o__Mycoplasmatales.f__Mycoplasmataceae.g__Mycoplasma.s__penetrans.t__HF_2
+t648231715 d__Bacteria.p__Tenericutes.c__Mollicutes.o__Mycoplasmatales.f__Mycoplasmataceae.g__Mycoplasma.s__pneumoniae.t__FH
+t637000183 d__Bacteria.p__Tenericutes.c__Mollicutes.o__Mycoplasmatales.f__Mycoplasmataceae.g__Mycoplasma.s__pneumoniae.t__M129
+t637000184 d__Bacteria.p__Tenericutes.c__Mollicutes.o__Mycoplasmatales.f__Mycoplasmataceae.g__Mycoplasma.s__pulmonis.t__UAB_CTIP
+t650716064 d__Bacteria.p__Tenericutes.c__Mollicutes.o__Mycoplasmatales.f__Mycoplasmataceae.g__Mycoplasma.s__suis.t__str__Illinois
+t637000185 d__Bacteria.p__Tenericutes.c__Mollicutes.o__Mycoplasmatales.f__Mycoplasmataceae.g__Mycoplasma.s__synoviae.t__53
+t637000332 d__Bacteria.p__Tenericutes.c__Mollicutes.o__Mycoplasmatales.f__Mycoplasmataceae.g__Ureaplasma.s__parvum.t__serovar_3_ATCC_700970
+t641736107 d__Bacteria.p__Tenericutes.c__Mollicutes.o__Mycoplasmatales.f__Mycoplasmataceae.g__Ureaplasma.s__parvum.t__sv_14___ATCC_33697
+t641736108 d__Bacteria.p__Tenericutes.c__Mollicutes.o__Mycoplasmatales.f__Mycoplasmataceae.g__Ureaplasma.s__parvum.t__sv_1__ATCC_27813
+t641522658 d__Bacteria.p__Tenericutes.c__Mollicutes.o__Mycoplasmatales.f__Mycoplasmataceae.g__Ureaplasma.s__parvum.t__sv_3__ATCC_27815
+t641736200 d__Bacteria.p__Tenericutes.c__Mollicutes.o__Mycoplasmatales.f__Mycoplasmataceae.g__Ureaplasma.s__parvum.t__sv_6__ATCC_27818
+t645951879 d__Bacteria.p__Tenericutes.c__Mollicutes.o__Mycoplasmatales.f__Mycoplasmataceae.g__Ureaplasma.s__urealyticum.t__serovar_11_str__ATCC_33695
+t645951878 d__Bacteria.p__Tenericutes.c__Mollicutes.o__Mycoplasmatales.f__Mycoplasmataceae.g__Ureaplasma.s__urealyticum.t__serovar_12_str__ATCC_33696
+t645951877 d__Bacteria.p__Tenericutes.c__Mollicutes.o__Mycoplasmatales.f__Mycoplasmataceae.g__Ureaplasma.s__urealyticum.t__serovar_13_str__ATCC_33698
+t645951876 d__Bacteria.p__Tenericutes.c__Mollicutes.o__Mycoplasmatales.f__Mycoplasmataceae.g__Ureaplasma.s__urealyticum.t__serovar_2_str__ATCC_27814
+t645951875 d__Bacteria.p__Tenericutes.c__Mollicutes.o__Mycoplasmatales.f__Mycoplasmataceae.g__Ureaplasma.s__urealyticum.t__serovar_4_str__ATCC_27816
+t645951874 d__Bacteria.p__Tenericutes.c__Mollicutes.o__Mycoplasmatales.f__Mycoplasmataceae.g__Ureaplasma.s__urealyticum.t__serovar_5_str__ATCC_27817
+t645951873 d__Bacteria.p__Tenericutes.c__Mollicutes.o__Mycoplasmatales.f__Mycoplasmataceae.g__Ureaplasma.s__urealyticum.t__serovar_7_str__ATCC_27819
+t645951872 d__Bacteria.p__Tenericutes.c__Mollicutes.o__Mycoplasmatales.f__Mycoplasmataceae.g__Ureaplasma.s__urealyticum.t__serovar_8_str__ATCC_27618
+t645951871 d__Bacteria.p__Tenericutes.c__Mollicutes.o__Mycoplasmatales.f__Mycoplasmataceae.g__Ureaplasma.s__urealyticum.t__serovar_9_str__ATCC_33175
+t643348586 d__Bacteria.p__Tenericutes.c__Mollicutes.o__Mycoplasmatales.f__Mycoplasmataceae.g__Ureaplasma.s__urealyticum.t__sv_10__ATCC_33699
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+t641228488 d__Bacteria.p__Thermi.c__Deinococci.o__Deinococcales.f__Deinococcaceae.g__Deinococcus.s__geothermalis.t__DSM_11300
+t649633034 d__Bacteria.p__Thermi.c__Deinococci.o__Deinococcales.f__Deinococcaceae.g__Deinococcus.s__maricopensis.t__DSM_21211
+t649633035 d__Bacteria.p__Thermi.c__Deinococci.o__Deinococcales.f__Deinococcaceae.g__Deinococcus.s__proteolyticus.t__MRP
+t637000092 d__Bacteria.p__Thermi.c__Deinococci.o__Deinococcales.f__Deinococcaceae.g__Deinococcus.s__radiodurans.t__R1
+t646564586 d__Bacteria.p__Thermi.c__Deinococci.o__Deinococcales.f__Trueperaceae.g__Truepera.s__radiovictrix.t__DSM_17093
+t646564545 d__Bacteria.p__Thermi.c__Thermi.o__Thermales.f__Thermaceae.g__Meiothermus.s__ruber.t__DSM_1279
+t646564546 d__Bacteria.p__Thermi.c__Thermi.o__Thermales.f__Thermaceae.g__Meiothermus.s__silvanus.t__DSM_9946
+t649633077 d__Bacteria.p__Thermi.c__Thermi.o__Thermales.f__Thermaceae.g__Oceanithermus.s__profundus.t__DSM_14977
+t645058872 d__Bacteria.p__Thermi.c__Thermi.o__Thermales.f__Thermaceae.g__Thermus.s__aquaticus.t__Y51MC23
+t649633105 d__Bacteria.p__Thermi.c__Thermi.o__Thermales.f__Thermaceae.g__Thermus.s__scotoductus.t__SA_01
+t637000322 d__Bacteria.p__Thermi.c__Thermi.o__Thermales.f__Thermaceae.g__Thermus.s__thermophilus.t__HB27
+t637000323 d__Bacteria.p__Thermi.c__Thermi.o__Thermales.f__Thermaceae.g__Thermus.s__thermophilus.t__HB8
+t640753026 d__Bacteria.p__Thermotogae.c__Thermotogae.o__Thermotogales.f__Thermotogaceae.g__Fervidobacterium.s__nodosum.t__Rt17_B1
+t644736379 d__Bacteria.p__Thermotogae.c__Thermotogae.o__Thermotogales.f__Thermotogaceae.g__Kosmotoga.s__olearia.t__TBF_19_5_1
+t647533182 d__Bacteria.p__Thermotogae.c__Thermotogae.o__Thermotogales.f__Thermotogaceae.g__Marinitoga.s__piezophila.t__KA3
+t641228500 d__Bacteria.p__Thermotogae.c__Thermotogae.o__Thermotogales.f__Thermotogaceae.g__Petrotoga.s__mobilis.t__SJ95
+t643348583 d__Bacteria.p__Thermotogae.c__Thermotogae.o__Thermotogales.f__Thermotogaceae.g__Thermosipho.s__africanus.t__TCF52B
+t640753057 d__Bacteria.p__Thermotogae.c__Thermotogae.o__Thermotogales.f__Thermotogaceae.g__Thermosipho.s__melanesiensis.t__BI429
+t641228511 d__Bacteria.p__Thermotogae.c__Thermotogae.o__Thermotogales.f__Thermotogaceae.g__Thermotoga.s__lettingae.t__TMO
+t637000321 d__Bacteria.p__Thermotogae.c__Thermotogae.o__Thermotogales.f__Thermotogaceae.g__Thermotoga.s__maritima.t__MSB8
+t646311964 d__Bacteria.p__Thermotogae.c__Thermotogae.o__Thermotogales.f__Thermotogaceae.g__Thermotoga.s__naphthophila.t__RKU_10
+t643348584 d__Bacteria.p__Thermotogae.c__Thermotogae.o__Thermotogales.f__Thermotogaceae.g__Thermotoga.s__neapolitana.t__DSM_4359
+t640427150 d__Bacteria.p__Thermotogae.c__Thermotogae.o__Thermotogales.f__Thermotogaceae.g__Thermotoga.s__petrophila.t__RKU_1
+t642487181 d__Bacteria.p__Thermotogae.c__Thermotogae.o__Thermotogales.f__Thermotogaceae.g__Thermotoga.s__sp_.t__RQ2
+t648276752 d__Bacteria.p__Thermotogae.c__Thermotogae.o__Thermotogales.f__unclassified.g__unclassified.s__bacterium.t__mesG1_Ag_4_2
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+t640963002 d__Bacteria.p__Verrucomicrobia.c__Opitutae.o__Opitutales.f__Opitutaceae.g__unclassified.s__bacterium.t__TAV2
+t646564524 d__Bacteria.p__Verrucomicrobia.c__Opitutae.o__Puniceicoccales.f__Puniceicoccaceae.g__Coraliomargarita.s__akajimensis.t__DSM_45221
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+t650716001 d__Archaea.p__Crenarchaeota.c__Thermoprotei.o__Sulfolobales.f__Sulfolobaceae.g__Acidianus.s__hospitalis.t__W1
+t650716051 d__Archaea.p__Crenarchaeota.c__Thermoprotei.o__Sulfolobales.f__Sulfolobaceae.g__Metallosphaera.s__cuprina.t__Ar_4
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+t638154519 d__Archaea.p__Crenarchaeota.c__Thermoprotei.o__Sulfolobales.f__Sulfolobaceae.g__Sulfolobus.s__tokodaii.t__str__7
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+t638154513 d__Archaea.p__Crenarchaeota.c__Thermoprotei.o__Thermoproteales.f__Thermoproteaceae.g__Pyrobaculum.s__aerophilum.t__str__IM2
+t640427135 d__Archaea.p__Crenarchaeota.c__Thermoprotei.o__Thermoproteales.f__Thermoproteaceae.g__Pyrobaculum.s__arsenaticum.t__DSM_13514
+t640069326 d__Archaea.p__Crenarchaeota.c__Thermoprotei.o__Thermoproteales.f__Thermoproteaceae.g__Pyrobaculum.s__calidifontis.t__JCM_11548
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+t641522657 d__Archaea.p__Crenarchaeota.c__Thermoprotei.o__Thermoproteales.f__Thermoproteaceae.g__Thermoproteus.s__neutrophilus.t__V24Sta
+t650716098 d__Archaea.p__Crenarchaeota.c__Thermoprotei.o__Thermoproteales.f__Thermoproteaceae.g__Thermoproteus.s__uzoniensis.t__768_20
+t648028062 d__Archaea.p__Crenarchaeota.c__Thermoprotei.o__Thermoproteales.f__Thermoproteaceae.g__Vulcanisaeta.s__distributa.t__DSM_14429
+t650377985 d__Archaea.p__Crenarchaeota.c__Thermoprotei.o__Thermoproteales.f__Thermoproteaceae.g__Vulcanisaeta.s__moutnovskia.t__768_28
+t638154502 d__Archaea.p__Euryarchaeota.c__Archaeoglobi.o__Archaeoglobales.f__Archaeoglobaceae.g__Archaeoglobus.s__fulgidus.t__DSM_4304
+t646311906 d__Archaea.p__Euryarchaeota.c__Archaeoglobi.o__Archaeoglobales.f__Archaeoglobaceae.g__Archaeoglobus.s__profundus.t__DSM_5631
+t646564534 d__Archaea.p__Euryarchaeota.c__Archaeoglobi.o__Archaeoglobales.f__Archaeoglobaceae.g__Ferroglobus.s__placidus.t__DSM_10642
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+t649989953 d__Archaea.p__Euryarchaeota.c__Halobacteria.o__Halobacteriales.f__Halobacteriaceae.g__Haladaptatus.s__paucihalophilus.t__DX253
+t648028029 d__Archaea.p__Euryarchaeota.c__Halobacteria.o__Halobacteriales.f__Halobacteriaceae.g__Halalkalicoccus.s__jeotgali.t__B3
+t641522631 d__Archaea.p__Euryarchaeota.c__Halobacteria.o__Halobacteriales.f__Halobacteriaceae.g__Halobacterium.s__salinarum.t__R1
+t638154504 d__Archaea.p__Euryarchaeota.c__Halobacteria.o__Halobacteriales.f__Halobacteriaceae.g__Halobacterium.s__sp_.t__NRC_1
+t646564536 d__Archaea.p__Euryarchaeota.c__Halobacteria.o__Halobacteriales.f__Halobacteriaceae.g__Haloferax.s__volcanii.t__DS2
+t649633053 d__Archaea.p__Euryarchaeota.c__Halobacteria.o__Halobacteriales.f__Halobacteriaceae.g__Halogeometricum.s__borinquense.t__DSM_11551
+t644736372 d__Archaea.p__Euryarchaeota.c__Halobacteria.o__Halobacteriales.f__Halobacteriaceae.g__Halomicrobium.s__mukohataei.t__DSM_12286
+t651053028 d__Archaea.p__Euryarchaeota.c__Halobacteria.o__Halobacteriales.f__Halobacteriaceae.g__Haloquadratum.s__walsbyi.t__C23
+t637000129 d__Archaea.p__Euryarchaeota.c__Halobacteria.o__Halobacteriales.f__Halobacteriaceae.g__Haloquadratum.s__walsbyi.t__DSM_16790
+t651324042 d__Archaea.p__Euryarchaeota.c__Halobacteria.o__Halobacteriales.f__Halobacteriaceae.g__Halorhabdus.s__tiamatea.t__SARL4B
+t644736373 d__Archaea.p__Euryarchaeota.c__Halobacteria.o__Halobacteriales.f__Halobacteriaceae.g__Halorhabdus.s__utahensis.t__DSM_12940
+t643692025 d__Archaea.p__Euryarchaeota.c__Halobacteria.o__Halobacteriales.f__Halobacteriaceae.g__Halorubrum.s__lacusprofundi.t__ATCC_49239
+t646311934 d__Archaea.p__Euryarchaeota.c__Halobacteria.o__Halobacteriales.f__Halobacteriaceae.g__Haloterrigena.s__turkmenica.t__DSM_5511
+t646564555 d__Archaea.p__Euryarchaeota.c__Halobacteria.o__Halobacteriales.f__Halobacteriaceae.g__Natrialba.s__magadii.t__ATCC_43099
+t637000187 d__Archaea.p__Euryarchaeota.c__Halobacteria.o__Halobacteriales.f__Halobacteriaceae.g__Natronomonas.s__pharaonis.t__DSM_2160
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+t2510065045 d__Bacteria.p__Proteobacteria.c__Betaproteobacteria.o__Burkholderiales.f__Burkholderiaceae.g__Burkholderia.s__sp_.t__unknown
+t2511231144 d__Bacteria.p__Proteobacteria.c__Betaproteobacteria.o__Burkholderiales.f__Burkholderiaceae.g__Burkholderia.s__sp_.t__unknown
+t2508501021 d__Bacteria.p__Proteobacteria.c__Betaproteobacteria.o__Burkholderiales.f__unclassified.g__unclassified.s__sp_.t__unknown
+t2510065085 d__Bacteria.p__Firmicutes.c__Clostridia.o__Thermoanaerobacterales.f__Thermoanaerobacteraceae.g__Caldanaerobius.s__sp_.t__unknown
+t2506381024 d__Bacteria.p__Caldithrix.c__Caldithrixae.o__Caldithrixales.f__unclassified.g__Caldithrix.s__sp_.t__unknown
+t2511231076 d__Bacteria.p__Firmicutes.c__Clostridia.o__Clostridiales.f__Clostridiaceae.g__Candidatus Arthromitus.s__sp_.t__unknown
+t2511231204 d__Bacteria.p__Firmicutes.c__Clostridia.o__Clostridiales.f__Clostridiaceae.g__Candidatus Arthromitus.s__sp_.t__unknown
+t2511231057 d__Bacteria.p__Firmicutes.c__Clostridia.o__Clostridiales.f__Clostridiaceae.g__Candidatus Arthromitus.s__sp_.t__unknown
+t2512047033 d__Bacteria.p__Acidobacteria.c__unclassified.o__unclassified.f__unclassified.g__Candidatus Chloracidobacterium.s__sp_.t__unknown
+t2507262005 d__Bacteria.p__Proteobacteria.c__Gammaproteobacteria.o__Enterobacteriales.f__Enterobacteriaceae.g__Candidatus Regiella.s__sp_.t__unknown
+t2512564072 d__Bacteria.p__Proteobacteria.c__Alphaproteobacteria.o__Rickettsiales.f__Rickettsiaceae.g__Rickettsia.s__sp_.t__unknown
+t2511231072 d__Bacteria.p__Proteobacteria.c__Gammaproteobacteria.o__Enterobacteriales.f__Enterobacteriaceae.g__Serratia.s__sp_.t__unknown
+t2511231192 d__Bacteria.p__Proteobacteria.c__Betaproteobacteria.o__unclassified.f__unclassified.g__Candidatus Tremblaya.s__sp_.t__unknown
+t2510065088 d__Bacteria.p__Firmicutes.c__Clostridia.o__Thermoanaerobacterales.f__Thermoanaerobacteraceae.g__Carboxydothermus.s__sp_.t__unknown
+t2505679016 d__Bacteria.p__Actinobacteria.c__Actinobacteria.o__Actinomycetales.f__Cellulomonadaceae.g__Cellulomonas.s__sp_.t__unknown
+t2511231082 d__Bacteria.p__Chlamydiae.c__Chlamydiae.o__Chlamydiales.f__Chlamydiaceae.g__Chlamydia.s__sp_.t__unknown
+t2511231138 d__Bacteria.p__Chlamydiae.c__Chlamydiae.o__Chlamydiales.f__Chlamydiaceae.g__Chlamydia.s__sp_.t__unknown
+t2512564068 d__Bacteria.p__Chlamydiae.c__Chlamydiia.o__Chlamydiales.f__Chlamydiaceae.g__Chlamydia.s__sp_.t__unknown
+t2512564063 d__Bacteria.p__Chlamydiae.c__Chlamydiia.o__Chlamydiales.f__Chlamydiaceae.g__Chlamydia.s__sp_.t__unknown
+t2511231213 d__Bacteria.p__Chlamydiae.c__Chlamydiae.o__Chlamydiales.f__Chlamydiaceae.g__Chlamydia.s__sp_.t__unknown
+t2506520040 d__Bacteria.p__Chloroflexi.c__Chloroflexi.o__Chloroflexales.f__Chloroflexaceae.g__Chloroflexus.s__sp_.t__unknown
+t2512047056 d__Bacteria.p__Proteobacteria.c__Alphaproteobacteria.o__Sphingomonadales.f__Sphingomonadaceae.g__Citromicrobium.s__sp_.t__unknown
+t2510065052 d__Bacteria.p__Synergistetes.c__Synergistia.o__Synergistales.f__Synergistaceae.g__Cloacibacillus.s__sp_.t__unknown
+t2509887034 d__Bacteria.p__Firmicutes.c__Clostridia.o__Clostridiales.f__Clostridiaceae.g__Clostridium.s__sp_.t__unknown
+t2506783038 d__Bacteria.p__Firmicutes.c__Clostridia.o__Clostridiales.f__Clostridiaceae.g__Clostridium.s__sp_.t__unknown
+t2506783008 d__Bacteria.p__Firmicutes.c__Clostridia.o__Clostridiales.f__Clostridiaceae.g__Clostridium.s__sp_.t__unknown
+t2507262051 d__Bacteria.p__Firmicutes.c__Clostridia.o__Clostridiales.f__Clostridiaceae.g__Clostridium.s__sp_.t__unknown
+t2512047057 d__Bacteria.p__Firmicutes.c__Clostridia.o__Clostridiales.f__Peptostreptococcaceae.g__Clostridium.s__sp_.t__unknown
+t2509276051 d__Bacteria.p__Firmicutes.c__Clostridia.o__Clostridiales.f__Clostridiaceae.g__Clostridium.s__sp_.t__unknown
+t2512564078 d__Bacteria.p__Proteobacteria.c__Deltaproteobacteria.o__Myxococcales.f__Myxococcaceae.g__Corallococcus.s__sp_.t__unknown
+t2503538010 d__Bacteria.p__Actinobacteria.c__Actinobacteria.o__Coriobacteriales.f__Coriobacteriaceae.g__Coriobacterium.s__sp_.t__unknown
+t2511231126 d__Bacteria.p__Actinobacteria.c__Actinobacteria.o__Actinomycetales.f__Corynebacteriaceae.g__Corynebacterium.s__sp_.t__unknown
+t2511231075 d__Bacteria.p__Actinobacteria.c__Actinobacteria.o__Actinomycetales.f__Corynebacteriaceae.g__Corynebacterium.s__sp_.t__unknown
+t2511231099 d__Bacteria.p__Actinobacteria.c__Actinobacteria.o__Actinomycetales.f__Corynebacteriaceae.g__Corynebacterium.s__sp_.t__unknown
+t2511231089 d__Bacteria.p__Actinobacteria.c__Actinobacteria.o__Actinomycetales.f__Corynebacteriaceae.g__Corynebacterium.s__sp_.t__unknown
+t2511231115 d__Bacteria.p__Actinobacteria.c__Actinobacteria.o__Actinomycetales.f__Corynebacteriaceae.g__Corynebacterium.s__sp_.t__unknown
+t2511231083 d__Bacteria.p__Actinobacteria.c__Actinobacteria.o__Actinomycetales.f__Corynebacteriaceae.g__Corynebacterium.s__sp_.t__unknown
+t2511231091 d__Bacteria.p__Actinobacteria.c__Actinobacteria.o__Actinomycetales.f__Corynebacteriaceae.g__Corynebacterium.s__sp_.t__unknown
+t2511231059 d__Bacteria.p__Actinobacteria.c__Actinobacteria.o__Actinomycetales.f__Corynebacteriaceae.g__Corynebacterium.s__sp_.t__unknown
+t2511231084 d__Bacteria.p__Actinobacteria.c__Actinobacteria.o__Actinomycetales.f__Corynebacteriaceae.g__Corynebacterium.s__sp_.t__unknown
+t2511231088 d__Bacteria.p__Actinobacteria.c__Actinobacteria.o__Actinomycetales.f__Corynebacteriaceae.g__Corynebacterium.s__sp_.t__unknown
+t2511231111 d__Bacteria.p__Actinobacteria.c__Actinobacteria.o__Actinomycetales.f__Corynebacteriaceae.g__Corynebacterium.s__sp_.t__unknown
+t2511231107 d__Bacteria.p__Actinobacteria.c__Actinobacteria.o__Actinomycetales.f__Corynebacteriaceae.g__Corynebacterium.s__sp_.t__unknown
+t2511231142 d__Bacteria.p__Actinobacteria.c__Actinobacteria.o__Actinomycetales.f__Corynebacteriaceae.g__Corynebacterium.s__sp_.t__unknown
+t2511231067 d__Bacteria.p__Actinobacteria.c__Actinobacteria.o__Actinomycetales.f__Corynebacteriaceae.g__Corynebacterium.s__sp_.t__unknown
+t2512564036 d__Bacteria.p__Actinobacteria.c__Actinobacteria.o__Actinomycetales.f__Corynebacteriaceae.g__Corynebacterium.s__sp_.t__unknown
+t2511231212 d__Bacteria.p__Actinobacteria.c__Actinobacteria.o__Actinomycetales.f__Corynebacteriaceae.g__Corynebacterium.s__sp_.t__unknown
+t2511231153 d__Bacteria.p__Actinobacteria.c__Actinobacteria.o__Actinomycetales.f__Corynebacteriaceae.g__Corynebacterium.s__sp_.t__unknown
+t2512564058 d__Bacteria.p__Actinobacteria.c__Actinobacteria.o__Actinomycetales.f__Corynebacteriaceae.g__Corynebacterium.s__sp_.t__unknown
+t2511231154 d__Bacteria.p__Actinobacteria.c__Actinobacteria.o__Actinomycetales.f__Corynebacteriaceae.g__Corynebacterium.s__sp_.t__unknown
+t2511231114 d__Bacteria.p__Actinobacteria.c__Actinobacteria.o__Actinomycetales.f__Corynebacteriaceae.g__Corynebacterium.s__sp_.t__unknown
+t2510065084 d__Bacteria.p__Actinobacteria.c__Actinobacteria.o__Actinomycetales.f__Cryptosporangiaceae.g__Cryptosporangium.s__sp_.t__unknown
+t2507262054 d__Bacteria.p__Cyanobacteria.c__Oscillatoriophycidae.o__Chroococcales.f__Cyanobacteriaceae.g__Cyanothece.s__sp_.t__unknown
+t2506381023 d__Bacteria.p__Bacteroidetes.c__Cytophagia.o__Cytophagales.f__Cyclobacteriaceae.g__Cyclobacterium.s__sp_.t__unknown
+t2510917037 d__Bacteria.p__Proteobacteria.c__Gammaproteobacteria.o__Thiotrichales.f__Piscirickettsiaceae.g__Cycloclasticus.s__sp_.t__unknown
+t2509601038 d__Bacteria.p__Bacteroidetes.c__Cytophagia.o__Cytophagales.f__Cytophagaceae.g__Cytophaga.s__sp_.t__unknown
+t2508501046 d__Bacteria.p__Proteobacteria.c__Betaproteobacteria.o__Rhodocyclales.f__Rhodocyclaceae.g__Azospira.s__sp_.t__unknown
+t2510065016 d__Bacteria.p__Firmicutes.c__Clostridia.o__Clostridiales.f__Peptococcaceae.g__Dehalobacter.s__sp_.t__unknown
+t2512564069 d__Bacteria.p__Deinococcus-Thermus.c__Deinococci.o__Deinococcales.f__Deinococcaceae.g__Deinococcus.s__sp_.t__unknown
+t2509276064 d__Bacteria.p__Thermi.c__Deinococci.o__Deinococcales.f__Deinococcaceae.g__Deinococcus.s__sp_.t__unknown
+t2509276065 d__Bacteria.p__Thermi.c__Deinococci.o__Deinococcales.f__Deinococcaceae.g__Deinococcus.s__sp_.t__unknown
+t2508501115 d__Bacteria.p__Thermi.c__Deinococci.o__Deinococcales.f__Deinococcaceae.g__Deinococcus.s__sp_.t__unknown
+t2507262031 d__Bacteria.p__Firmicutes.c__Clostridia.o__Clostridiales.f__Peptococcaceae.g__Desulfitobacterium.s__sp_.t__unknown
+t2507149019 d__Bacteria.p__Firmicutes.c__Clostridia.o__Clostridiales.f__Peptococcaceae.g__Desulfitobacterium.s__sp_.t__unknown
+t2507149024 d__Bacteria.p__Firmicutes.c__Clostridia.o__Clostridiales.f__Peptococcaceae.g__Desulfitobacterium.s__sp_.t__unknown
+t2512875014 d__Bacteria.p__Firmicutes.c__Clostridia.o__Clostridiales.f__Peptococcaceae.g__Desulfitobacterium.s__sp_.t__unknown
+t2510917033 d__Bacteria.p__Firmicutes.c__Clostridia.o__Clostridiales.f__Peptococcaceae.g__Desulfitobacterium.s__sp_.t__unknown
+t2504136006 d__Bacteria.p__Proteobacteria.c__Deltaproteobacteria.o__Syntrophobacterales.f__Syntrophaceae.g__Desulfobacca.s__sp_.t__unknown
+t2508501023 d__Bacteria.p__Proteobacteria.c__Deltaproteobacteria.o__Desulfobacterales.f__Desulfobacteraceae.g__Desulfobacter.s__sp_.t__unknown
+t2503692001 d__Bacteria.p__Proteobacteria.c__Deltaproteobacteria.o__Desulfobacterales.f__Desulfobacteraceae.g__Desulfococcus.s__sp_.t__unknown
+t2509601019 d__Bacteria.p__Proteobacteria.c__Deltaproteobacteria.o__Syntrophobacterales.f__Syntrophaceae.g__Desulfomonile.s__sp_.t__unknown
+t2501915963 d__Bacteria.p__Firmicutes.c__Clostridia.o__Clostridiales.f__Peptococcaceae.g__Desulfonispora.s__sp_.t__unknown
+t2506783061 d__Bacteria.p__Firmicutes.c__Clostridia.o__Clostridiales.f__Peptococcaceae.g__Desulfosporosinus.s__sp_.t__unknown
+t2510065044 d__Bacteria.p__Firmicutes.c__Clostridia.o__Clostridiales.f__Peptococcaceae.g__Desulfosporosinus.s__sp_.t__unknown
+t2508501136 d__Bacteria.p__Firmicutes.c__Clostridia.o__Clostridiales.f__Peptococcaceae.g__Desulfosporosinus.s__sp_.t__unknown
+t2508501001 d__Bacteria.p__Firmicutes.c__Clostridia.o__Clostridiales.f__Peptococcaceae.g__Desulfosporosinus.s__sp_.t__unknown
+t2508501002 d__Bacteria.p__Firmicutes.c__Clostridia.o__Clostridiales.f__Peptococcaceae.g__Desulfotomaculum.s__sp_.t__unknown
+t2507262026 d__Bacteria.p__Firmicutes.c__Clostridia.o__Clostridiales.f__Peptococcaceae.g__Desulfotomaculum.s__sp_.t__unknown
+t2508501038 d__Bacteria.p__Proteobacteria.c__Deltaproteobacteria.o__Desulfovibrionales.f__Desulfovibrionaceae.g__Desulfovibrio.s__sp_.t__unknown
+t2508501043 d__Bacteria.p__Proteobacteria.c__Deltaproteobacteria.o__Desulfovibrionales.f__Desulfovibrionaceae.g__Desulfovibrio.s__sp_.t__unknown
+t2512564091 d__Bacteria.p__Proteobacteria.c__Deltaproteobacteria.o__Desulfurellales.f__Desulfurellaceae.g__Desulfurella.s__sp_.t__unknown
+t2511231045 d__Bacteria.p__Proteobacteria.c__Deltaproteobacteria.o__Desulfurellales.f__Desulfurellaceae.g__Desulfurella.s__sp_.t__unknown
+t2504136008 d__Bacteria.p__Chrysiogenetes.c__Chrysiogenetes.o__Chrysiogenales.f__Chrysiogenaceae.g__Desulfurispirillum.s__sp_.t__unknown
+t2501533205 d__Bacteria.p__Synergistetes.c__Synergistia.o__Dethiosulfovibrionales.f__Dethiosulfovibrionaceae.g__Dethiosulfovibrio.s__sp_.t__unknown
+t2509276020 d__Bacteria.p__Bacteroidetes.c__Cytophagia.o__Cytophagales.f__Cyclobacteriaceae.g__Echinicola.s__sp_.t__unknown
+t2508501110 d__Bacteria.p__Proteobacteria.c__Gammaproteobacteria.o__Chromatiales.f__Ectothiorhodospiraceae.g__Ectothiorhodospira.s__sp_.t__unknown
+t2506485001 d__Bacteria.p__Bacteroidetes.c__Cytophagia.o__Cytophagales.f__Cytophagaceae.g__Emticicia.s__sp_.t__unknown
+t2510065031 d__Bacteria.p__Proteobacteria.c__Alphaproteobacteria.o__Rhizobiales.f__Rhizobiaceae.g__Sinorhizobium.s__sp_.t__unknown
+t2511231052 d__Bacteria.p__Proteobacteria.c__Alphaproteobacteria.o__Rhizobiales.f__Rhizobiaceae.g__Sinorhizobium.s__sp_.t__unknown
+t2506520035 d__Bacteria.p__Proteobacteria.c__Gammaproteobacteria.o__Enterobacteriales.f__Enterobacteriaceae.g__Enterobacter.s__sp_.t__unknown
+t2511231133 d__Bacteria.p__Firmicutes.c__Bacilli.o__Lactobacillales.f__Enterococcaceae.g__Enterococcus.s__sp_.t__unknown
+t2505679034 d__Bacteria.p__Proteobacteria.c__Gammaproteobacteria.o__Enterobacteriales.f__Enterobacteriaceae.g__Escherichia.s__sp_.t__unknown
+t2512047089 d__Bacteria.p__Proteobacteria.c__Gammaproteobacteria.o__Enterobacteriales.f__Enterobacteriaceae.g__Escherichia.s__sp_.t__unknown
+t2511231131 d__Bacteria.p__Proteobacteria.c__Gammaproteobacteria.o__Enterobacteriales.f__Enterobacteriaceae.g__Escherichia.s__sp_.t__unknown
+t2512047041 d__Bacteria.p__Proteobacteria.c__Gammaproteobacteria.o__Enterobacteriales.f__Enterobacteriaceae.g__Escherichia.s__sp_.t__unknown
+t2506520037 d__Bacteria.p__Proteobacteria.c__Gammaproteobacteria.o__Enterobacteriales.f__Enterobacteriaceae.g__Escherichia.s__sp_.t__unknown
+t2511231170 d__Bacteria.p__Proteobacteria.c__Gammaproteobacteria.o__Enterobacteriales.f__Enterobacteriaceae.g__Escherichia.s__sp_.t__unknown
+t2511231198 d__Bacteria.p__Proteobacteria.c__Gammaproteobacteria.o__Enterobacteriales.f__Enterobacteriaceae.g__Escherichia.s__sp_.t__unknown
+t2509276007 d__Bacteria.p__Firmicutes.c__Clostridia.o__Clostridiales.f__Eubacteriaceae.g__Eubacterium.s__sp_.t__unknown
+t2507149014 d__Bacteria.p__Thermotogae.c__Thermotogae.o__Thermotogales.f__Thermotogaceae.g__Fervidobacterium.s__sp_.t__unknown
+t2511231077 d__Bacteria.p__Firmicutes.c__Clostridia.o__Clostridiales.f__Peptostreptococcaceae.g__Filifactor.s__sp_.t__unknown
+t2505679024 d__Bacteria.p__Cyanobacteria.c__Nostocophycidae.o__Nostocales.f__Hapalosiphonaceae.g__Fischerella.s__sp_.t__unknown
+t2507262045 d__Bacteria.p__Bacteroidetes.c__Flavobacteria.o__unclassified.f__unclassified.g__unclassified.s__sp_.t__unknown
+t2507262047 d__Bacteria.p__Bacteroidetes.c__Flavobacteria.o__Flavobacteriales.f__Flavobacteriaceae.g__Flavobacterium.s__sp_.t__unknown
+t2511231102 d__Bacteria.p__Bacteroidetes.c__Flavobacteria.o__Flavobacteriales.f__Flavobacteriaceae.g__Flavobacterium.s__sp_.t__unknown
+t2511231122 d__Bacteria.p__Bacteroidetes.c__Flavobacteria.o__Flavobacteriales.f__Flavobacteriaceae.g__Flavobacterium.s__sp_.t__unknown
+t2509601041 d__Bacteria.p__Bacteroidetes.c__Cytophagia.o__Cytophagales.f__Cytophagaceae.g__Flectobacillus.s__sp_.t__unknown
+t2509276059 d__Bacteria.p__Bacteroidetes.c__Cytophagia.o__Cytophagales.f__Cytophagaceae.g__Flexibacter.s__sp_.t__unknown
+t2505679008 d__Bacteria.p__Deferribacteres.c__Deferribacteres.o__Deferribacterales.f__Deferribacteraceae.g__Flexistipes.s__sp_.t__unknown
+t2503707007 d__Bacteria.p__Bacteroidetes.c__Flavobacteria.o__Flavobacteriales.f__Cryomorphaceae.g__Fluviicola.s__sp_.t__unknown
+t2512564035 d__Bacteria.p__Proteobacteria.c__Gammaproteobacteria.o__Thiotrichales.f__Francisellaceae.g__Francisella.s__sp_.t__unknown
+t2512564026 d__Bacteria.p__Proteobacteria.c__Gammaproteobacteria.o__Thiotrichales.f__Francisellaceae.g__Francisella.s__sp_.t__unknown
+t2508501039 d__Bacteria.p__Actinobacteria.c__Actinobacteria.o__Actinomycetales.f__Frankiaceae.g__Frankia.s__sp_.t__unknown
+t2506381019 d__Bacteria.p__Actinobacteria.c__Actinobacteria.o__Actinomycetales.f__Frankiaceae.g__Frankia.s__sp_.t__unknown
+t2506381020 d__Bacteria.p__Actinobacteria.c__Actinobacteria.o__Actinomycetales.f__Frankiaceae.g__Frankia.s__sp_.t__unknown
+t2509887025 d__Bacteria.p__Actinobacteria.c__Actinobacteria.o__Actinomycetales.f__Frankiaceae.g__Frankia.s__sp_.t__unknown
+t2506783011 d__Bacteria.p__Actinobacteria.c__Actinobacteria.o__Actinomycetales.f__Frankiaceae.g__Frankia.s__sp_.t__unknown
+t2509601034 d__Bacteria.p__Proteobacteria.c__Gammaproteobacteria.o__Xanthomonadales.f__Xanthomonadaceae.g__Frateuria.s__sp_.t__unknown
+t2508501004 d__Bacteria.p__Firmicutes.c__Bacilli.o__Bacillales.f__Bacillaceae.g__Geobacillus.s__sp_.t__unknown
+t2511231121 d__Bacteria.p__Firmicutes.c__Bacilli.o__Bacillales.f__Bacillaceae.g__Geobacillus.s__sp_.t__unknown
+t2506783053 d__Bacteria.p__Bacteroidetes.c__Flavobacteria.o__Flavobacteriales.f__Flavobacteriaceae.g__Gillisia.s__sp_.t__unknown
+t2511231080 d__Bacteria.p__Proteobacteria.c__Gammaproteobacteria.o__Alteromonadales.f__Alteromonadaceae.g__Glaciecola.s__sp_.t__unknown
+t2512047058 d__Bacteria.p__Actinobacteria.c__Actinobacteria.o__Actinomycetales.f__Gordoniaceae.g__Gordonia.s__sp_.t__unknown
+t2512564042 d__Bacteria.p__Actinobacteria.c__Actinobacteria.o__Actinomycetales.f__Gordoniaceae.g__Gordonia.s__sp_.t__unknown
+t2512047059 d__Bacteria.p__Proteobacteria.c__Gammaproteobacteria.o__Pasteurellales.f__Pasteurellaceae.g__Haemophilus.s__sp_.t__unknown
+t2512564038 d__Bacteria.p__Proteobacteria.c__Gammaproteobacteria.o__Pasteurellales.f__Pasteurellaceae.g__Haemophilus.s__sp_.t__unknown
+t2511231078 d__Bacteria.p__Proteobacteria.c__Gammaproteobacteria.o__Pasteurellales.f__Pasteurellaceae.g__Haemophilus.s__sp_.t__unknown
+t2512047060 d__Bacteria.p__Proteobacteria.c__Gammaproteobacteria.o__Pasteurellales.f__Pasteurellaceae.g__Haemophilus.s__sp_.t__unknown
+t2504756004 d__Bacteria.p__Bacteroidetes.c__Sphingobacteria.o__Sphingobacteriales.f__Saprospiraceae.g__Haliscomenobacter.s__sp_.t__unknown
+t2509601017 d__Bacteria.p__Firmicutes.c__Clostridia.o__Halanaerobiales.f__Halobacteroidaceae.g__Halobacteroides.s__sp_.t__unknown
+t2509887032 d__Bacteria.p__Firmicutes.c__Clostridia.o__Halanaerobiales.f__Halobacteroidaceae.g__Halonatronum.s__sp_.t__unknown
+t2511231168 d__Bacteria.p__Proteobacteria.c__Epsilonproteobacteria.o__Campylobacterales.f__Helicobacteraceae.g__Helicobacter.s__sp_.t__unknown
+t2512564071 d__Bacteria.p__Proteobacteria.c__Epsilonproteobacteria.o__Campylobacterales.f__Helicobacteraceae.g__Helicobacter.s__sp_.t__unknown
+t2511231216 d__Bacteria.p__Proteobacteria.c__Epsilonproteobacteria.o__Campylobacterales.f__Helicobacteraceae.g__Helicobacter.s__sp_.t__unknown
+t2511231147 d__Bacteria.p__Proteobacteria.c__Epsilonproteobacteria.o__Campylobacterales.f__Helicobacteraceae.g__Helicobacter.s__sp_.t__unknown
+t2511231139 d__Bacteria.p__Proteobacteria.c__Epsilonproteobacteria.o__Campylobacterales.f__Helicobacteraceae.g__Helicobacter.s__sp_.t__unknown
+t2508501111 d__Bacteria.p__Chloroflexi.c__Chloroflexi.o__Herpetosiphonales.f__Herpetosiphonaceae.g__Herpetosiphon.s__sp_.t__unknown
+t2504136000 d__Bacteria.p__Proteobacteria.c__Deltaproteobacteria.o__Desulfurellales.f__Desulfurellaceae.g__Hippea.s__sp_.t__unknown
+t2509276008 d__Bacteria.p__Proteobacteria.c__Alphaproteobacteria.o__Rhizobiales.f__Phyllobacteriaceae.g__Hoeflea.s__sp_.t__unknown
+t2509601028 d__Bacteria.p__Acidobacteria.c__Holophagae.o__Holophagales.f__Holophagaceae.g__Holophaga.s__sp_.t__unknown
+t2507262044 d__Bacteria.p__Aquificae.c__Aquificae.o__Aquificales.f__Aquificaceae.g__Hydrogenobaculum.s__sp_.t__unknown
+t2502422321 d__Bacteria.p__Bacteroidetes.c__Cytophagia.o__Cytophagales.f__Cytophagaceae.g__Hymenobacter.s__sp_.t__unknown
+t2506783045 d__Bacteria.p__Proteobacteria.c__Alphaproteobacteria.o__Rhizobiales.f__Hyphomicrobiaceae.g__Hyphomicrobium.s__sp_.t__unknown
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+t2505679076 d__Bacteria.p__Actinobacteria.c__Actinobacteria.o__Actinomycetales.f__Promicromonosporaceae.g__Isoptericola.s__sp_.t__unknown
+t2505679068 d__Bacteria.p__Actinobacteria.c__Actinobacteria.o__Actinomycetales.f__Promicromonosporaceae.g__Isoptericola.s__sp_.t__unknown
+t2509601042 d__Bacteria.p__Actinobacteria.c__Actinobacteria.o__Actinomycetales.f__Pseudonocardiaceae.g__Jiangella.s__sp_.t__unknown
+t2508501103 d__Bacteria.p__Synergistetes.c__Synergistia.o__Synergistales.f__Synergistaceae.g__Jonquetella.s__sp_.t__unknown
+t2509276026 d__Bacteria.p__Bacteroidetes.c__Flavobacteria.o__Flavobacteriales.f__Flavobacteriaceae.g__Joostella.s__sp_.t__unknown
+t2511231188 d__Bacteria.p__Proteobacteria.c__Alphaproteobacteria.o__Rhodobacterales.f__Rhodobacteraceae.g__Ketogulonicigenium.s__sp_.t__unknown
+t2511231086 d__Bacteria.p__Actinobacteria.c__Actinobacteria.o__Actinomycetales.f__Streptomycetaceae.g__Kitasatospora.s__sp_.t__unknown
+t2511231124 d__Bacteria.p__Proteobacteria.c__Gammaproteobacteria.o__Enterobacteriales.f__Enterobacteriaceae.g__Klebsiella.s__sp_.t__unknown
+t2511231199 d__Bacteria.p__Proteobacteria.c__Gammaproteobacteria.o__Enterobacteriales.f__Enterobacteriaceae.g__Klebsiella.s__sp_.t__unknown
+t2500069000 d__Bacteria.p__Firmicutes.c__Bacilli.o__Lactobacillales.f__Lactobacillaceae.g__Lactobacillus.s__reuteri.t__100-23
+t2511231185 d__Bacteria.p__Firmicutes.c__Bacilli.o__Lactobacillales.f__Lactobacillaceae.g__Lactobacillus.s__sp_.t__unknown
+t2511231118 d__Bacteria.p__Firmicutes.c__Bacilli.o__Lactobacillales.f__Lactobacillaceae.g__Lactobacillus.s__sp_.t__unknown
+t2511231101 d__Bacteria.p__Firmicutes.c__Bacilli.o__Lactobacillales.f__Streptococcaceae.g__Lactococcus.s__sp_.t__unknown
+t2511231201 d__Bacteria.p__Firmicutes.c__Bacilli.o__Lactobacillales.f__Streptococcaceae.g__Lactococcus.s__sp_.t__unknown
+t2511231149 d__Bacteria.p__Firmicutes.c__Bacilli.o__Lactobacillales.f__Streptococcaceae.g__Lactococcus.s__sp_.t__unknown
+t2511231146 d__Bacteria.p__Proteobacteria.c__Gammaproteobacteria.o__Legionellales.f__Legionellaceae.g__Legionella.s__sp_.t__unknown
+t2512564009 d__Bacteria.p__Proteobacteria.c__Alphaproteobacteria.o__Rhodobacterales.f__Rhodobacteraceae.g__Leisingera.s__sp_.t__unknown
+t2510917032 d__Bacteria.p__Proteobacteria.c__Alphaproteobacteria.o__Rhodobacterales.f__Rhodobacteraceae.g__Leisingera.s__sp_.t__unknown
+t2512047090 d__Bacteria.p__Proteobacteria.c__Alphaproteobacteria.o__Rhodobacterales.f__Rhodobacteraceae.g__Leisingera.s__sp_.t__unknown
+t2506783010 d__Bacteria.p__Spirochaetes.c__Spirochaetes.o__Leptospirales.f__Leptospiraceae.g__Leptonema.s__sp_.t__unknown
+t2511231167 d__Bacteria.p__Spirochaetes.c__Spirochaetia.o__Spirochaetales.f__Leptospiraceae.g__Leptospira.s__sp_.t__unknown
+t2506520045 d__Bacteria.p__Fusobacteria.c__Fusobacteria.o__Leptotrichales.f__Leptotrichiaceae.g__Leptotrichia.s__sp_.t__unknown
+t2511231143 d__Bacteria.p__Firmicutes.c__Bacilli.o__Lactobacillales.f__Leuconostocaceae.g__Leuconostoc.s__sp_.t__unknown
+t2511231098 d__Bacteria.p__Firmicutes.c__Bacilli.o__Bacillales.f__Listeriaceae.g__Listeria.s__sp_.t__unknown
+t2511231174 d__Bacteria.p__Firmicutes.c__Bacilli.o__Bacillales.f__Listeriaceae.g__Listeria.s__sp_.t__unknown
+t2512047016 d__Bacteria.p__Firmicutes.c__Bacilli.o__Bacillales.f__Listeriaceae.g__Listeria.s__sp_.t__unknown
+t2511231184 d__Bacteria.p__Firmicutes.c__Bacilli.o__Bacillales.f__Listeriaceae.g__Listeria.s__sp_.t__unknown
+t2511231203 d__Bacteria.p__Firmicutes.c__Bacilli.o__Bacillales.f__Listeriaceae.g__Listeria.s__sp_.t__unknown
+t2511231190 d__Bacteria.p__Firmicutes.c__Bacilli.o__Bacillales.f__Listeriaceae.g__Listeria.s__sp_.t__unknown
+t2503508009 d__Bacteria.p__Firmicutes.c__Clostridia.o__Thermoanaerobacterales.f__Thermoanaerobacterales Family IV. Incertae Sedis.g__Mahella.s__sp_.t__unknown
+t2505679018 d__Bacteria.p__Proteobacteria.c__Gammaproteobacteria.o__Chromatiales.f__Chromatiaceae.g__Marichromatium.s__sp_.t__unknown
+t2510065050 d__Bacteria.p__Proteobacteria.c__Gammaproteobacteria.o__Chromatiales.f__Chromatiaceae.g__Marichromatium.s__sp_.t__unknown
+t2504643006 d__Bacteria.p__Thermi.c__Thermi.o__Thermales.f__Thermaceae.g__Marinithermus.s__sp_.t__unknown
+t2508501120 d__Bacteria.p__Thermotogae.c__Thermotogae.o__Thermotogales.f__Thermotogaceae.g__Marinitoga.s__sp_.t__unknown
+t2506210002 d__Bacteria.p__Proteobacteria.c__Gammaproteobacteria.o__Oceanospirillales.f__Oceanospirillaceae.g__Marinomonas.s__sp_.t__unknown
+t2506210003 d__Bacteria.p__Proteobacteria.c__Gammaproteobacteria.o__Oceanospirillales.f__Oceanospirillaceae.g__Marinomonas.s__sp_.t__unknown
+t2511231071 d__Bacteria.p__Firmicutes.c__Negativicutes.o__Selenomonadales.f__Veillonellaceae.g__Megasphaera.s__sp_.t__unknown
+t2512047062 d__Bacteria.p__Firmicutes.c__Negativicutes.o__Selenomonadales.f__Veillonellaceae.g__Megasphaera.s__sp_.t__unknown
+t2510065032 d__Bacteria.p__Thermi.c__Thermi.o__Thermales.f__Thermaceae.g__Meiothermus.s__sp_.t__unknown
+t2512564044 d__Bacteria.p__Firmicutes.c__Bacilli.o__Lactobacillales.f__Enterococcaceae.g__Melissococcus.s__sp_.t__unknown
+t2509276022 d__Bacteria.p__Proteobacteria.c__Alphaproteobacteria.o__Rhizobiales.f__Phyllobacteriaceae.g__Mesorhizobium.s__sp_.t__unknown
+t2509276018 d__Bacteria.p__Proteobacteria.c__Alphaproteobacteria.o__Rhizobiales.f__Phyllobacteriaceae.g__Mesorhizobium.s__sp_.t__unknown
+t2510065059 d__Bacteria.p__Proteobacteria.c__Alphaproteobacteria.o__Rhizobiales.f__Phyllobacteriaceae.g__Mesorhizobium.s__sp_.t__unknown
+t2511231038 d__Bacteria.p__Proteobacteria.c__Alphaproteobacteria.o__Rhizobiales.f__Phyllobacteriaceae.g__Mesorhizobium.s__sp_.t__unknown
+t2512875016 d__Bacteria.p__Proteobacteria.c__Alphaproteobacteria.o__Rhizobiales.f__Phyllobacteriaceae.g__Mesorhizobium.s__sp_.t__unknown
+t2512875024 d__Bacteria.p__Proteobacteria.c__Alphaproteobacteria.o__Rhizobiales.f__Phyllobacteriaceae.g__Mesorhizobium.s__sp_.t__unknown
+t2508501126 d__Bacteria.p__Proteobacteria.c__Alphaproteobacteria.o__Rhizobiales.f__Phyllobacteriaceae.g__Mesorhizobium.s__sp_.t__unknown
+t2503198000 d__Bacteria.p__Proteobacteria.c__Alphaproteobacteria.o__Rhizobiales.f__Phyllobacteriaceae.g__Mesorhizobium.s__sp_.t__unknown
+t2508501127 d__Bacteria.p__Proteobacteria.c__Alphaproteobacteria.o__Rhizobiales.f__Phyllobacteriaceae.g__Mesorhizobium.s__sp_.t__unknown
+t2508501123 d__Bacteria.p__Proteobacteria.c__Alphaproteobacteria.o__Rhizobiales.f__Phyllobacteriaceae.g__Mesorhizobium.s__sp_.t__unknown
+t2507262015 d__Bacteria.p__Proteobacteria.c__Alphaproteobacteria.o__Rhizobiales.f__Methylobacteriaceae.g__Methylobacterium.s__sp_.t__unknown
+t2508501066 d__Bacteria.p__Proteobacteria.c__Gammaproteobacteria.o__Methylococcales.f__Methylococcaceae.g__Methylocaldum.s__sp_.t__unknown
+t2510065046 d__Bacteria.p__Proteobacteria.c__Alphaproteobacteria.o__Rhizobiales.f__Beijerinckiaceae.g__Methylocapsa.s__sp_.t__unknown
+t2508501010 d__Bacteria.p__Proteobacteria.c__Gammaproteobacteria.o__Methylococcales.f__Methylococcaceae.g__Methylomicrobium.s__sp_.t__unknown
+t2512564015 d__Bacteria.p__Proteobacteria.c__Betaproteobacteria.o__Methylophilales.f__Methylophilaceae.g__unclassified.s__sp_.t__unknown
+t2507262027 d__Bacteria.p__Proteobacteria.c__Alphaproteobacteria.o__Rhizobiales.f__Methylocystaceae.g__Methylosinus.s__sp_.t__unknown
+t2511231069 d__Bacteria.p__Proteobacteria.c__Alphaproteobacteria.o__unclassified.f__unclassified.g__Micavibrio.s__sp_.t__unknown
+t2508501050 d__Bacteria.p__Proteobacteria.c__Alphaproteobacteria.o__Rhizobiales.f__Methylobacteriaceae.g__Microvirga.s__sp_.t__unknown
+t2508501114 d__Bacteria.p__Proteobacteria.c__Alphaproteobacteria.o__Rhizobiales.f__Methylobacteriaceae.g__Microvirga.s__sp_.t__unknown
+t2506520020 d__Bacteria.p__Bacteroidetes.c__Sphingobacteria.o__Sphingobacteriales.f__Sphingobacteriaceae.g__Mucilaginibacter.s__sp_.t__unknown
+t2505679007 d__Bacteria.p__Bacteroidetes.c__Flavobacteria.o__Flavobacteriales.f__Flavobacteriaceae.g__Muricauda.s__sp_.t__unknown
+t2511231152 d__Bacteria.p__Actinobacteria.c__Actinobacteria.o__Actinomycetales.f__Mycobacteriaceae.g__Mycobacterium.s__sp_.t__unknown
+t2506783014 d__Bacteria.p__Actinobacteria.c__Actinobacteria.o__Actinomycetales.f__Mycobacteriaceae.g__Mycobacterium.s__sp_.t__unknown
+t2512047063 d__Bacteria.p__Actinobacteria.c__Actinobacteria.o__Actinomycetales.f__Mycobacteriaceae.g__Mycobacterium.s__sp_.t__unknown
+t2512564050 d__Bacteria.p__Actinobacteria.c__Actinobacteria.o__Actinomycetales.f__Mycobacteriaceae.g__Mycobacterium.s__sp_.t__unknown
+t2512564041 d__Bacteria.p__Actinobacteria.c__Actinobacteria.o__Actinomycetales.f__Mycobacteriaceae.g__Mycobacterium.s__sp_.t__unknown
+t2506783048 d__Bacteria.p__Actinobacteria.c__Actinobacteria.o__Actinomycetales.f__Mycobacteriaceae.g__Mycobacterium.s__sp_.t__unknown
+t2508501106 d__Bacteria.p__Actinobacteria.c__Actinobacteria.o__Actinomycetales.f__Mycobacteriaceae.g__Mycobacterium.s__sp_.t__unknown
+t2506783060 d__Bacteria.p__Actinobacteria.c__Actinobacteria.o__Actinomycetales.f__Mycobacteriaceae.g__Mycobacterium.s__sp_.t__unknown
+t2511231130 d__Bacteria.p__Actinobacteria.c__Actinobacteria.o__Actinomycetales.f__Mycobacteriaceae.g__Mycobacterium.s__sp_.t__unknown
+t2511231070 d__Bacteria.p__Actinobacteria.c__Actinobacteria.o__Actinomycetales.f__Mycobacteriaceae.g__Mycobacterium.s__sp_.t__unknown
+t2512564073 d__Bacteria.p__Actinobacteria.c__Actinobacteria.o__Actinomycetales.f__Mycobacteriaceae.g__Mycobacterium.s__sp_.t__unknown
+t2512564056 d__Bacteria.p__Actinobacteria.c__Actinobacteria.o__Actinomycetales.f__Mycobacteriaceae.g__Mycobacterium.s__sp_.t__unknown
+t2508501052 d__Bacteria.p__Actinobacteria.c__Actinobacteria.o__Actinomycetales.f__Mycobacteriaceae.g__Mycobacterium.s__sp_.t__unknown
+t2512047064 d__Bacteria.p__Tenericutes.c__Mollicutes.o__Mycoplasmatales.f__Mycoplasmataceae.g__Mycoplasma.s__sp_.t__unknown
+t2512047065 d__Bacteria.p__Tenericutes.c__Mollicutes.o__Mycoplasmatales.f__Mycoplasmataceae.g__Mycoplasma.s__sp_.t__unknown
+t2501939620 d__Bacteria.p__Tenericutes.c__Mollicutes.o__Mycoplasmatales.f__Mycoplasmataceae.g__Mycoplasma.s__sp_.t__unknown
+t2511231066 d__Bacteria.p__Tenericutes.c__Mollicutes.o__Mycoplasmatales.f__Mycoplasmataceae.g__Mycoplasma.s__sp_.t__unknown
+t2511231163 d__Bacteria.p__Tenericutes.c__Mollicutes.o__Mycoplasmatales.f__Mycoplasmataceae.g__Mycoplasma.s__sp_.t__unknown
+t2512047042 d__Bacteria.p__Tenericutes.c__Mollicutes.o__Mycoplasmatales.f__Mycoplasmataceae.g__Mycoplasma.s__sp_.t__unknown
+t2511231209 d__Bacteria.p__Tenericutes.c__Mollicutes.o__Mycoplasmatales.f__Mycoplasmataceae.g__Mycoplasma.s__sp_.t__unknown
+t2511231058 d__Bacteria.p__Tenericutes.c__Mollicutes.o__Mycoplasmatales.f__Mycoplasmataceae.g__Mycoplasma.s__sp_.t__unknown
+t2511231073 d__Bacteria.p__Tenericutes.c__Mollicutes.o__Mycoplasmatales.f__Mycoplasmataceae.g__Mycoplasma.s__sp_.t__unknown
+t2506520050 d__Bacteria.p__Bacteroidetes.c__Flavobacteria.o__Flavobacteriales.f__Flavobacteriaceae.g__Myroides.s__sp_.t__unknown
+t2506783006 d__Bacteria.p__Bacteroidetes.c__Sphingobacteria.o__Sphingobacteriales.f__Chitinophagaceae.g__Niabella.s__sp_.t__unknown
+t2506520016 d__Bacteria.p__Bacteroidetes.c__Sphingobacteria.o__Sphingobacteriales.f__Chitinophagaceae.g__Niastella.s__sp_.t__unknown
+t2505679045 d__Bacteria.p__Proteobacteria.c__Betaproteobacteria.o__Nitrosomonadales.f__Nitrosomonadaceae.g__Nitrosomonas.s__sp_.t__unknown
+t2511231172 d__Bacteria.p__Actinobacteria.c__Actinobacteria.o__Actinomycetales.f__Nocardiaceae.g__Nocardia.s__sp_.t__unknown
+t2503283010 d__Bacteria.p__unclassified.c__unclassified.o__unclassified.f__unclassified.g__unclassified.s__sp_.t__unknown
+t2512047035 d__Bacteria.p__Proteobacteria.c__Gammaproteobacteria.o__Aeromonadales.f__Aeromonadaceae.g__Oceanimonas.s__sp_.t__unknown
+t2508501067 d__Bacteria.p__Verrucomicrobia.c__Opitutae.o__Opitutales.f__Opitutaceae.g__unclassified.s__sp_.t__unknown
+t2510065049 d__Bacteria.p__Verrucomicrobia.c__Opitutae.o__unclassified.f__Opitutaceae.g__unclassified.s__sp_.t__unknown
+t2509601001 d__Bacteria.p__Bacteroidetes.c__Flavobacteria.o__Flavobacteriales.f__Flavobacteriaceae.g__Ornithobacterium.s__sp_.t__unknown
+t2510065010 d__Bacteria.p__Cyanobacteria.c__unclassified.o__Oscillatoriales.f__unclassified.g__unclassified.s__sp_.t__unknown
+t2511231134 d__Bacteria.p__Firmicutes.c__Clostridia.o__Clostridiales.f__Oscillospiraceae.g__Oscillibacter.s__sp_.t__unknown
+t2508501098 d__Bacteria.p__Bacteroidetes.c__Flavobacteria.o__Flavobacteriales.f__Cryomorphaceae.g__Owenweeksia.s__sp_.t__unknown
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+t2512564039 d__Bacteria.p__Firmicutes.c__Bacilli.o__Bacillales.f__Paenibacillaceae.g__Paenibacillus.s__sp_.t__unknown
+t2511231159 d__Bacteria.p__Firmicutes.c__Bacilli.o__Bacillales.f__Paenibacillaceae.g__Paenibacillus.s__sp_.t__unknown
+t2511231079 d__Bacteria.p__Firmicutes.c__Bacilli.o__Bacillales.f__Paenibacillaceae.g__Paenibacillus.s__sp_.t__unknown
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+t2511231160 d__Bacteria.p__Proteobacteria.c__Gammaproteobacteria.o__Enterobacteriales.f__Enterobacteriaceae.g__Pantoea.s__sp_.t__unknown
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+t2512047066 d__Bacteria.p__Firmicutes.c__Clostridia.o__Clostridiales.f__Clostridiales Family XI. Incertae Sedis.g__unclassified.s__sp_.t__unknown
+t2512047043 d__Bacteria.p__Proteobacteria.c__Gammaproteobacteria.o__Pasteurellales.f__Pasteurellaceae.g__Pasteurella.s__sp_.t__unknown
+t2512564074 d__Bacteria.p__Proteobacteria.c__Gammaproteobacteria.o__Pasteurellales.f__Pasteurellaceae.g__Pasteurella.s__sp_.t__unknown
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+t2510917036 d__Bacteria.p__Proteobacteria.c__Alphaproteobacteria.o__unclassified.f__unclassified.g__Candidatus Pelagibacter.s__ubique.t__HIMB058
+t2511231054 d__Bacteria.p__Proteobacteria.c__Alphaproteobacteria.o__Rhizobiales.f__Hyphomicrobiaceae.g__Pelagibacterium.s__sp_.t__unknown
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+t2512047067 d__Bacteria.p__Firmicutes.c__Clostridia.o__Clostridiales.f__Clostridiales Family XI. Incertae Sedis.g__Peptoniphilus.s__sp_.t__unknown
+t2512047087 d__Bacteria.p__Proteobacteria.c__Alphaproteobacteria.o__Rhodobacterales.f__Rhodobacteraceae.g__Phaeobacter.s__sp_.t__unknown
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+t2503982034 d__Bacteria.p__Proteobacteria.c__Betaproteobacteria.o__Burkholderiales.f__Burkholderiaceae.g__Polynucleobacter.s__sp_.t__unknown
+t2502545039 d__Bacteria.p__Bacteroidetes.c__Cytophagia.o__Cytophagales.f__Cytophagaceae.g__Pontibacter.s__sp_.t__unknown
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+t2509276002 d__Bacteria.p__unclassified.c__unclassified.o__unclassified.f__unclassified.g__unclassified.s__sp_.t__unknown
+t2509276000 d__Bacteria.p__unclassified.c__unclassified.o__unclassified.f__unclassified.g__unclassified.s__sp_.t__unknown
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+t2509601036 d__Bacteria.p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Prevotellaceae.g__Prevotella.s__sp_.t__unknown
+t2509276066 d__Bacteria.p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Prevotellaceae.g__Prevotella.s__sp_.t__unknown
+t2501416924 d__Bacteria.p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Prevotellaceae.g__Prevotella.s__sp_.t__unknown
+t2503754046 d__Bacteria.p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Prevotellaceae.g__Prevotella.s__sp_.t__unknown
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+t2511231219 d__Bacteria.p__Actinobacteria.c__Actinobacteria.o__Actinomycetales.f__Propionibacteriaceae.g__Propionibacterium.s__sp_.t__unknown
+t2511231125 d__Bacteria.p__Actinobacteria.c__Actinobacteria.o__Actinomycetales.f__Propionibacteriaceae.g__Propionibacterium.s__sp_.t__unknown
+t2511231095 d__Bacteria.p__Actinobacteria.c__Actinobacteria.o__Actinomycetales.f__Propionibacteriaceae.g__Propionibacterium.s__sp_.t__unknown
+t2511231063 d__Bacteria.p__Actinobacteria.c__Actinobacteria.o__Actinomycetales.f__Propionibacteriaceae.g__Propionibacterium.s__sp_.t__unknown
+t2512047068 d__Bacteria.p__Actinobacteria.c__Actinobacteria.o__Actinomycetales.f__Propionibacteriaceae.g__Propionibacterium.s__sp_.t__unknown
+t2511231094 d__Bacteria.p__Proteobacteria.c__Betaproteobacteria.o__Neisseriales.f__Neisseriaceae.g__Pseudogulbenkiania.s__sp_.t__unknown
+t2511231183 d__Bacteria.p__Proteobacteria.c__Gammaproteobacteria.o__Pseudomonadales.f__Pseudomonadaceae.g__Pseudomonas.s__sp_.t__unknown
+t2511231165 d__Bacteria.p__Proteobacteria.c__Gammaproteobacteria.o__Pseudomonadales.f__Pseudomonadaceae.g__Pseudomonas.s__sp_.t__unknown
+t2512047018 d__Bacteria.p__Proteobacteria.c__Gammaproteobacteria.o__Pseudomonadales.f__Pseudomonadaceae.g__Pseudomonas.s__sp_.t__unknown
+t2511231156 d__Bacteria.p__Proteobacteria.c__Gammaproteobacteria.o__Pseudomonadales.f__Pseudomonadaceae.g__Pseudomonas.s__sp_.t__unknown
+t2504643024 d__Bacteria.p__Proteobacteria.c__Gammaproteobacteria.o__Pseudomonadales.f__Pseudomonadaceae.g__Pseudomonas.s__sp_.t__unknown
+t2503538034 d__Bacteria.p__Proteobacteria.c__Gammaproteobacteria.o__Pseudomonadales.f__Pseudomonadaceae.g__Pseudomonas.s__sp_.t__unknown
+t2505679082 d__Bacteria.p__Proteobacteria.c__Gammaproteobacteria.o__Pseudomonadales.f__Pseudomonadaceae.g__Pseudomonas.s__sp_.t__unknown
+t2507149015 d__Bacteria.p__Proteobacteria.c__Gammaproteobacteria.o__Pseudomonadales.f__Pseudomonadaceae.g__Pseudomonas.s__sp_.t__unknown
+t2505313038 d__Bacteria.p__Proteobacteria.c__Gammaproteobacteria.o__Pseudomonadales.f__Pseudomonadaceae.g__Pseudomonas.s__sp_.t__unknown
+t2505313039 d__Bacteria.p__Proteobacteria.c__Gammaproteobacteria.o__Pseudomonadales.f__Pseudomonadaceae.g__Pseudomonas.s__sp_.t__unknown
+t2505313072 d__Bacteria.p__Proteobacteria.c__Gammaproteobacteria.o__Pseudomonadales.f__Pseudomonadaceae.g__Pseudomonas.s__sp_.t__unknown
+t2505313036 d__Bacteria.p__Proteobacteria.c__Gammaproteobacteria.o__Pseudomonadales.f__Pseudomonadaceae.g__Pseudomonas.s__sp_.t__unknown
+t2505313068 d__Bacteria.p__Proteobacteria.c__Gammaproteobacteria.o__Pseudomonadales.f__Pseudomonadaceae.g__Pseudomonas.s__sp_.t__unknown
+t2505313033 d__Bacteria.p__Proteobacteria.c__Gammaproteobacteria.o__Pseudomonadales.f__Pseudomonadaceae.g__Pseudomonas.s__sp_.t__unknown
+t2505313067 d__Bacteria.p__Proteobacteria.c__Gammaproteobacteria.o__Pseudomonadales.f__Pseudomonadaceae.g__Pseudomonas.s__sp_.t__unknown
+t2505313037 d__Bacteria.p__Proteobacteria.c__Gammaproteobacteria.o__Pseudomonadales.f__Pseudomonadaceae.g__Pseudomonas.s__sp_.t__unknown
+t2505313070 d__Bacteria.p__Proteobacteria.c__Gammaproteobacteria.o__Pseudomonadales.f__Pseudomonadaceae.g__Pseudomonas.s__sp_.t__unknown
+t2505313069 d__Bacteria.p__Proteobacteria.c__Gammaproteobacteria.o__Pseudomonadales.f__Pseudomonadaceae.g__Pseudomonas.s__sp_.t__unknown
+t2505313034 d__Bacteria.p__Proteobacteria.c__Gammaproteobacteria.o__Pseudomonadales.f__Pseudomonadaceae.g__Pseudomonas.s__sp_.t__unknown
+t2505313071 d__Bacteria.p__Proteobacteria.c__Gammaproteobacteria.o__Pseudomonadales.f__Pseudomonadaceae.g__Pseudomonas.s__sp_.t__unknown
+t2505313066 d__Bacteria.p__Proteobacteria.c__Gammaproteobacteria.o__Pseudomonadales.f__Pseudomonadaceae.g__Pseudomonas.s__sp_.t__unknown
+t2505313035 d__Bacteria.p__Proteobacteria.c__Gammaproteobacteria.o__Pseudomonadales.f__Pseudomonadaceae.g__Pseudomonas.s__sp_.t__unknown
+t2511231065 d__Bacteria.p__Proteobacteria.c__Alphaproteobacteria.o__Rhodobacterales.f__Rhodobacteraceae.g__Pseudovibrio.s__sp_.t__unknown
+t2512047037 d__Bacteria.p__Proteobacteria.c__Gammaproteobacteria.o__Xanthomonadales.f__Xanthomonadaceae.g__Pseudoxanthomonas.s__sp_.t__unknown
+t2506520038 d__Bacteria.p__Proteobacteria.c__Gammaproteobacteria.o__Enterobacteriales.f__Enterobacteriaceae.g__Rahnella.s__sp_.t__CIP 78.65, ATCC 33071
+t2511231074 d__Bacteria.p__Proteobacteria.c__Betaproteobacteria.o__Burkholderiales.f__Burkholderiaceae.g__Ralstonia.s__sp_.t__unknown
+t2512047069 d__Bacteria.p__Proteobacteria.c__Gammaproteobacteria.o__Chromatiales.f__Chromatiaceae.g__Rheinheimera.s__sp_.t__unknown
+t2509276052 d__Bacteria.p__Proteobacteria.c__Alphaproteobacteria.o__Rhizobiales.f__Rhizobiaceae.g__Rhizobium.s__sp_.t__unknown
+t2510461076 d__Bacteria.p__Proteobacteria.c__Alphaproteobacteria.o__Rhizobiales.f__Rhizobiaceae.g__Rhizobium.s__sp_.t__unknown
+t2510065019 d__Bacteria.p__Proteobacteria.c__Alphaproteobacteria.o__Rhizobiales.f__Rhizobiaceae.g__Rhizobium.s__sp_.t__unknown
+t2509276033 d__Bacteria.p__Proteobacteria.c__Alphaproteobacteria.o__Rhizobiales.f__Rhizobiaceae.g__Rhizobium.s__sp_.t__unknown
+t2510461043 d__Bacteria.p__Proteobacteria.c__Alphaproteobacteria.o__Rhizobiales.f__Rhizobiaceae.g__Rhizobium.s__sp_.t__unknown
+t2508501100 d__Bacteria.p__Proteobacteria.c__Alphaproteobacteria.o__Rhizobiales.f__Rhizobiaceae.g__Rhizobium.s__sp_.t__unknown
+t2509601047 d__Bacteria.p__Proteobacteria.c__Alphaproteobacteria.o__Rhizobiales.f__Rhizobiaceae.g__Rhizobium.s__sp_.t__unknown
+t2509276044 d__Bacteria.p__Proteobacteria.c__Alphaproteobacteria.o__Rhizobiales.f__Rhizobiaceae.g__Rhizobium.s__sp_.t__unknown
+t2510065076 d__Bacteria.p__Proteobacteria.c__Alphaproteobacteria.o__Rhizobiales.f__Rhizobiaceae.g__Rhizobium.s__sp_.t__unknown
+t2507525018 d__Bacteria.p__Proteobacteria.c__Alphaproteobacteria.o__Rhizobiales.f__Rhizobiaceae.g__Rhizobium.s__sp_.t__unknown
+t2509276021 d__Bacteria.p__Proteobacteria.c__Alphaproteobacteria.o__Rhizobiales.f__Rhizobiaceae.g__Rhizobium.s__sp_.t__unknown
+t2509276034 d__Bacteria.p__Proteobacteria.c__Alphaproteobacteria.o__Rhizobiales.f__Rhizobiaceae.g__Rhizobium.s__sp_.t__unknown
+t2512875034 d__Bacteria.p__Proteobacteria.c__Alphaproteobacteria.o__Rhizobiales.f__Rhizobiaceae.g__Rhizobium.s__sp_.t__unknown
+t2506520041 d__Bacteria.p__Proteobacteria.c__Gammaproteobacteria.o__Xanthomonadales.f__Xanthomonadaceae.g__Rhodanobacter.s__sp_.t__unknown
+t2510065087 d__Bacteria.p__Proteobacteria.c__Gammaproteobacteria.o__Xanthomonadales.f__Xanthomonadaceae.g__Rhodanobacter.s__sp_.t__unknown
+t2510065060 d__Bacteria.p__Proteobacteria.c__Gammaproteobacteria.o__Xanthomonadales.f__Xanthomonadaceae.g__Rhodanobacter.s__sp_.t__unknown
+t2511231162 d__Bacteria.p__Proteobacteria.c__Alphaproteobacteria.o__Rhodospirillales.f__Rhodospirillaceae.g__Rhodospirillum.s__sp_.t__unknown
+t2506520042 d__Bacteria.p__Bacteroidetes.c__Sphingobacteria.o__Sphingobacteriales.f__Rhodothermaceae.g__Rhodothermus.s__sp_.t__unknown
+t2505679078 d__Bacteria.p__Bacteroidetes.c__Sphingobacteria.o__Sphingobacteriales.f__Rhodothermaceae.g__Rhodothermus.s__sp_.t__unknown
+t2512564059 d__Bacteria.p__Proteobacteria.c__Alphaproteobacteria.o__Rickettsiales.f__Rickettsiaceae.g__Rickettsia.s__sp_.t__unknown
+t2512564031 d__Bacteria.p__Proteobacteria.c__Alphaproteobacteria.o__Rickettsiales.f__Rickettsiaceae.g__Rickettsia.s__sp_.t__unknown
+t2511231062 d__Bacteria.p__Proteobacteria.c__Alphaproteobacteria.o__Rickettsiales.f__Rickettsiaceae.g__Rickettsia.s__sp_.t__unknown
+t2512564029 d__Bacteria.p__Proteobacteria.c__Alphaproteobacteria.o__Rickettsiales.f__Rickettsiaceae.g__Rickettsia.s__sp_.t__unknown
+t2512564067 d__Bacteria.p__Proteobacteria.c__Alphaproteobacteria.o__Rickettsiales.f__Rickettsiaceae.g__Rickettsia.s__sp_.t__unknown
+t2512564062 d__Bacteria.p__Proteobacteria.c__Alphaproteobacteria.o__Rickettsiales.f__Rickettsiaceae.g__Rickettsia.s__sp_.t__unknown
+t2512564043 d__Bacteria.p__Proteobacteria.c__Alphaproteobacteria.o__Rickettsiales.f__Rickettsiaceae.g__Rickettsia.s__sp_.t__unknown
+t2512564064 d__Bacteria.p__Proteobacteria.c__Alphaproteobacteria.o__Rickettsiales.f__Rickettsiaceae.g__Rickettsia.s__sp_.t__unknown
+t2512564030 d__Bacteria.p__Proteobacteria.c__Alphaproteobacteria.o__Rickettsiales.f__Rickettsiaceae.g__Rickettsia.s__sp_.t__unknown
+t2512564034 d__Bacteria.p__Proteobacteria.c__Alphaproteobacteria.o__Rickettsiales.f__Rickettsiaceae.g__Rickettsia.s__sp_.t__unknown
+t2512564080 d__Bacteria.p__Proteobacteria.c__Alphaproteobacteria.o__Rickettsiales.f__Rickettsiaceae.g__Rickettsia.s__sp_.t__unknown
+t2512564053 d__Bacteria.p__Proteobacteria.c__Alphaproteobacteria.o__Rickettsiales.f__Rickettsiaceae.g__Rickettsia.s__sp_.t__unknown
+t2512564049 d__Bacteria.p__Proteobacteria.c__Alphaproteobacteria.o__Rickettsiales.f__Rickettsiaceae.g__Rickettsia.s__sp_.t__unknown
+t2512564070 d__Bacteria.p__Proteobacteria.c__Alphaproteobacteria.o__Rickettsiales.f__Rickettsiaceae.g__Rickettsia.s__sp_.t__unknown
+t2512564076 d__Bacteria.p__Proteobacteria.c__Alphaproteobacteria.o__Rickettsiales.f__Rickettsiaceae.g__Rickettsia.s__sp_.t__unknown
+t2512564040 d__Bacteria.p__Proteobacteria.c__Alphaproteobacteria.o__Rickettsiales.f__Rickettsiaceae.g__Rickettsia.s__sp_.t__unknown
+t2512564048 d__Bacteria.p__Proteobacteria.c__Alphaproteobacteria.o__Rickettsiales.f__Rickettsiaceae.g__Rickettsia.s__sp_.t__unknown
+t2512564047 d__Bacteria.p__Proteobacteria.c__Alphaproteobacteria.o__Rickettsiales.f__Rickettsiaceae.g__Rickettsia.s__sp_.t__unknown
+t2512564054 d__Bacteria.p__Proteobacteria.c__Alphaproteobacteria.o__Rickettsiales.f__Rickettsiaceae.g__Rickettsia.s__sp_.t__unknown
+t2512564077 d__Bacteria.p__Proteobacteria.c__Alphaproteobacteria.o__Rickettsiales.f__Rickettsiaceae.g__Rickettsia.s__sp_.t__unknown
+t2511231061 d__Bacteria.p__Proteobacteria.c__Alphaproteobacteria.o__Rickettsiales.f__Rickettsiaceae.g__Rickettsia.s__sp_.t__unknown
+t2512564061 d__Bacteria.p__Proteobacteria.c__Alphaproteobacteria.o__Rickettsiales.f__Rickettsiaceae.g__Rickettsia.s__sp_.t__unknown
+t2512564075 d__Bacteria.p__Proteobacteria.c__Alphaproteobacteria.o__Rickettsiales.f__Rickettsiaceae.g__Rickettsia.s__sp_.t__unknown
+t2512564057 d__Bacteria.p__Proteobacteria.c__Alphaproteobacteria.o__Rickettsiales.f__Rickettsiaceae.g__Rickettsia.s__sp_.t__unknown
+t2512564079 d__Bacteria.p__Bacteroidetes.c__Flavobacteriia.o__Flavobacteriales.f__Flavobacteriaceae.g__Riemerella.s__sp_.t__unknown
+t2509601020 d__Bacteria.p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Rikenellaceae.g__Rikenella.s__sp_.t__unknown
+t2511231128 d__Bacteria.p__Firmicutes.c__Clostridia.o__Clostridiales.f__Lachnospiraceae.g__Roseburia.s__sp_.t__unknown
+t2505679031 d__Bacteria.p__Actinobacteria.c__Actinobacteria.o__Rubrobacterales.f__Rubrobacteraceae.g__Rubrobacter.s__sp_.t__unknown
+t2505679030 d__Bacteria.p__Bacteroidetes.c__Cytophagia.o__Cytophagales.f__Cytophagaceae.g__Runella.s__sp_.t__unknown
+t2503113005 d__Bacteria.p__Proteobacteria.c__Alphaproteobacteria.o__unclassified.f__unclassified.g__unclassified.s__sp_.t__unknown
+t2512875015 d__Bacteria.p__Firmicutes.c__Bacilli.o__Bacillales.f__Paenibacillaceae.g__Saccharibacillus.s__sp_.t__unknown
+t2510917034 d__Bacteria.p__Firmicutes.c__Bacilli.o__Bacillales.f__Paenibacillaceae.g__Saccharibacillus.s__sp_.t__unknown
+t2508501044 d__Bacteria.p__Actinobacteria.c__Actinobacteria.o__Actinomycetales.f__Pseudonocardiaceae.g__Saccharomonospora.s__sp_.t__unknown
+t2508501013 d__Bacteria.p__Actinobacteria.c__Actinobacteria.o__Actinomycetales.f__Pseudonocardiaceae.g__Saccharomonospora.s__sp_.t__unknown
+t2508501119 d__Bacteria.p__Actinobacteria.c__Actinobacteria.o__Actinomycetales.f__Pseudonocardiaceae.g__Saccharomonospora.s__sp_.t__unknown
+t2508501116 d__Bacteria.p__Actinobacteria.c__Actinobacteria.o__Actinomycetales.f__Pseudonocardiaceae.g__Saccharomonospora.s__sp_.t__unknown
+t2508501012 d__Bacteria.p__Actinobacteria.c__Actinobacteria.o__Actinomycetales.f__Pseudonocardiaceae.g__Saccharomonospora.s__sp_.t__unknown
+t2510461000 d__Bacteria.p__Actinobacteria.c__Actinobacteria.o__Actinomycetales.f__Pseudonocardiaceae.g__Saccharomonospora.s__sp_.t__unknown
+t2507262046 d__Bacteria.p__Actinobacteria.c__Actinobacteria.o__Actinomycetales.f__Pseudonocardiaceae.g__Saccharomonospora.s__sp_.t__unknown
+t2509276054 d__Bacteria.p__Actinobacteria.c__Actinobacteria.o__Actinomycetales.f__Pseudonocardiaceae.g__Saccharomonospora.s__sp_.t__unknown
+t2512564045 d__Bacteria.p__Proteobacteria.c__Gammaproteobacteria.o__Enterobacteriales.f__Enterobacteriaceae.g__Salmonella.s__sp_.t__unknown
+t2512564037 d__Bacteria.p__Proteobacteria.c__Gammaproteobacteria.o__Enterobacteriales.f__Enterobacteriaceae.g__Salmonella.s__sp_.t__unknown
+t2512564027 d__Bacteria.p__Proteobacteria.c__Gammaproteobacteria.o__Enterobacteriales.f__Enterobacteriaceae.g__Salmonella.s__sp_.t__unknown
+t2512564051 d__Bacteria.p__Proteobacteria.c__Gammaproteobacteria.o__Enterobacteriales.f__Enterobacteriaceae.g__Salmonella.s__sp_.t__unknown
+t2512564046 d__Bacteria.p__Proteobacteria.c__Gammaproteobacteria.o__Enterobacteriales.f__Enterobacteriaceae.g__Salmonella.s__sp_.t__unknown
+t2512564052 d__Bacteria.p__Proteobacteria.c__Gammaproteobacteria.o__Enterobacteriales.f__Enterobacteriaceae.g__Salmonella.s__sp_.t__unknown
+t2511231218 d__Bacteria.p__Proteobacteria.c__Gammaproteobacteria.o__Enterobacteriales.f__Enterobacteriaceae.g__Salmonella.s__sp_.t__unknown
+t2511231164 d__Bacteria.p__Proteobacteria.c__Gammaproteobacteria.o__Enterobacteriales.f__Enterobacteriaceae.g__Salmonella.s__sp_.t__unknown
+t2512564066 d__Bacteria.p__Proteobacteria.c__Gammaproteobacteria.o__Enterobacteriales.f__Enterobacteriaceae.g__Salmonella.s__sp_.t__unknown
+t2509276035 d__Bacteria.p__Bacteroidetes.c__Sphingobacteria.o__Sphingobacteriales.f__Saprospiraceae.g__Saprospira.s__sp_.t__unknown
+t2512564032 d__Bacteria.p__Bacteroidetes.c__Sphingobacteriia.o__Sphingobacteriales.f__Saprospiraceae.g__Saprospira.s__sp_.t__unknown
+t2509887033 d__Bacteria.p__Bacteroidetes.c__Sphingobacteria.o__Flavobacteriales.f__Flavobacteriaceae.g__Sediminibacterium.s__sp_.t__unknown
+t2504557006 d__Bacteria.p__Firmicutes.c__Negativicutes.o__Selenomonadales.f__Veillonellaceae.g__Selenomonas.s__sp_.t__unknown
+t2506520007 d__Bacteria.p__Proteobacteria.c__Gammaproteobacteria.o__Enterobacteriales.f__Enterobacteriaceae.g__Serratia.s__plymuthica.t__AS9
+t2508501071 d__Bacteria.p__Proteobacteria.c__Gammaproteobacteria.o__Enterobacteriales.f__Enterobacteriaceae.g__Serratia.s__sp_.t__unknown
+t2507262035 d__Bacteria.p__Proteobacteria.c__Gammaproteobacteria.o__Alteromonadales.f__Shewanellaceae.g__Shewanella.s__sp_.t__unknown
+t2510436004 d__Bacteria.p__Proteobacteria.c__Gammaproteobacteria.o__Alteromonadales.f__Shewanellaceae.g__Shewanella.s__sp_.t__unknown
+t2511231030 d__Bacteria.p__Proteobacteria.c__Gammaproteobacteria.o__Alteromonadales.f__Shewanellaceae.g__Shewanella.s__sp_.t__unknown
+t2509601004 d__Bacteria.p__Planctomycetes.c__Planctomycetacia.o__Planctomycetales.f__Planctomycetaceae.g__Singulisphaera.s__sp_.t__unknown
+t2512047086 d__Bacteria.p__Proteobacteria.c__Alphaproteobacteria.o__Rhizobiales.f__Rhizobiaceae.g__Sinorhizobium.s__sp_.t__unknown
+t2510917035 d__Bacteria.p__Proteobacteria.c__Alphaproteobacteria.o__Rhizobiales.f__Rhizobiaceae.g__Sinorhizobium.s__sp_.t__unknown
+t2511231176 d__Bacteria.p__Proteobacteria.c__Alphaproteobacteria.o__Rhizobiales.f__Rhizobiaceae.g__Sinorhizobium.s__sp_.t__unknown
+t2512875026 d__Bacteria.p__Proteobacteria.c__Alphaproteobacteria.o__Rhizobiales.f__Rhizobiaceae.g__Sinorhizobium.s__sp_.t__unknown
+t2510065056 d__Bacteria.p__Proteobacteria.c__Alphaproteobacteria.o__Rhizobiales.f__Rhizobiaceae.g__Sinorhizobium.s__sp_.t__unknown
+t2510065057 d__Bacteria.p__Proteobacteria.c__Alphaproteobacteria.o__Rhizobiales.f__Rhizobiaceae.g__Sinorhizobium.s__sp_.t__unknown
+t2512564016 d__Bacteria.p__Proteobacteria.c__Alphaproteobacteria.o__Rhizobiales.f__Rhizobiaceae.g__Sinorhizobium.s__sp_.t__unknown
+t2509276019 d__Bacteria.p__Proteobacteria.c__Alphaproteobacteria.o__Rhizobiales.f__Rhizobiaceae.g__Sinorhizobium.s__sp_.t__unknown
+t2508501122 d__Bacteria.p__Proteobacteria.c__Alphaproteobacteria.o__Rhizobiales.f__Rhizobiaceae.g__Sinorhizobium.s__sp_.t__unknown
+t2509276062 d__Bacteria.p__Bacteroidetes.c__Sphingobacteria.o__Sphingobacteriales.f__Sphingobacteriaceae.g__Solitalea.s__sp_.t__unknown
+t2505679080 d__Bacteria.p__Bacteroidetes.c__Sphingobacteria.o__Sphingobacteriales.f__Sphingobacteriaceae.g__Sphingobacterium.s__sp_.t__unknown
+t2511231055 d__Bacteria.p__Proteobacteria.c__Alphaproteobacteria.o__Sphingomonadales.f__Sphingomonadaceae.g__Sphingobium.s__sp_.t__unknown
+t2509276057 d__Bacteria.p__Spirochaetes.c__Spirochaetia.o__Spirochaetales.f__Spirochaetaceae.g__Spirochaeta.s__sp_.t__unknown
+t2505679006 d__Bacteria.p__Spirochaetes.c__Spirochaetes.o__Spirochaetales.f__Spirochaetaceae.g__Spirochaeta.s__sp_.t__unknown
+t2503904012 d__Bacteria.p__Spirochaetes.c__Spirochaetes.o__Spirochaetales.f__Spirochaetaceae.g__Spirochaeta.s__sp_.t__unknown
+t2508501070 d__Bacteria.p__Spirochaetes.c__Spirochaetes.o__Spirochaetales.f__Spirochaetaceae.g__Spirochaeta.s__sp_.t__unknown
+t2506381022 d__Bacteria.p__Spirochaetes.c__Spirochaetes.o__Spirochaetales.f__Spirochaetaceae.g__Spirochaeta.s__sp_.t__unknown
+t2512047088 d__Bacteria.p__Firmicutes.c__Negativicutes.o__Selenomonadales.f__Veillonellaceae.g__Sporomusa.s__sp_.t__unknown
+t2512047070 d__Bacteria.p__Firmicutes.c__Bacilli.o__Bacillales.f__Planococcaceae.g__Sporosarcina.s__sp_.t__unknown
+t2511231196 d__Bacteria.p__Firmicutes.c__Bacilli.o__Bacillales.f__Staphylococcaceae.g__Staphylococcus.s__sp_.t__unknown
+t2511231197 d__Bacteria.p__Firmicutes.c__Bacilli.o__Bacillales.f__Staphylococcaceae.g__Staphylococcus.s__sp_.t__unknown
+t2511231205 d__Bacteria.p__Firmicutes.c__Bacilli.o__Bacillales.f__Staphylococcaceae.g__Staphylococcus.s__sp_.t__unknown
+t2511231171 d__Bacteria.p__Firmicutes.c__Bacilli.o__Bacillales.f__Staphylococcaceae.g__Staphylococcus.s__sp_.t__unknown
+t2511231175 d__Bacteria.p__Firmicutes.c__Bacilli.o__Bacillales.f__Staphylococcaceae.g__Staphylococcus.s__sp_.t__unknown
+t2512047071 d__Bacteria.p__Firmicutes.c__Bacilli.o__Lactobacillales.f__Streptococcaceae.g__Streptococcus.s__sp_.t__unknown
+t2512047072 d__Bacteria.p__Firmicutes.c__Bacilli.o__Lactobacillales.f__Streptococcaceae.g__Streptococcus.s__sp_.t__unknown
+t2511231157 d__Bacteria.p__Firmicutes.c__Bacilli.o__Lactobacillales.f__Streptococcaceae.g__Streptococcus.s__sp_.t__unknown
+t2512047073 d__Bacteria.p__Firmicutes.c__Bacilli.o__Lactobacillales.f__Streptococcaceae.g__Streptococcus.s__sp_.t__unknown
+t2512047038 d__Bacteria.p__Firmicutes.c__Bacilli.o__Lactobacillales.f__Streptococcaceae.g__Streptococcus.s__sp_.t__unknown
+t2512047074 d__Bacteria.p__Firmicutes.c__Bacilli.o__Lactobacillales.f__Streptococcaceae.g__Streptococcus.s__sp_.t__unknown
+t2512564060 d__Bacteria.p__Firmicutes.c__Bacilli.o__Lactobacillales.f__Streptococcaceae.g__Streptococcus.s__sp_.t__unknown
+t2511231123 d__Bacteria.p__Firmicutes.c__Bacilli.o__Lactobacillales.f__Streptococcaceae.g__Streptococcus.s__sp_.t__unknown
+t2511231137 d__Bacteria.p__Firmicutes.c__Bacilli.o__Lactobacillales.f__Streptococcaceae.g__Streptococcus.s__sp_.t__unknown
+t2512564065 d__Bacteria.p__Firmicutes.c__Bacilli.o__Lactobacillales.f__Streptococcaceae.g__Streptococcus.s__sp_.t__unknown
+t2511231166 d__Bacteria.p__Firmicutes.c__Bacilli.o__Lactobacillales.f__Streptococcaceae.g__Streptococcus.s__sp_.t__unknown
+t2511231193 d__Bacteria.p__Firmicutes.c__Bacilli.o__Lactobacillales.f__Streptococcaceae.g__Streptococcus.s__sp_.t__unknown
+t2511231189 d__Bacteria.p__Firmicutes.c__Bacilli.o__Lactobacillales.f__Streptococcaceae.g__Streptococcus.s__sp_.t__unknown
+t2511231186 d__Bacteria.p__Firmicutes.c__Bacilli.o__Lactobacillales.f__Streptococcaceae.g__Streptococcus.s__sp_.t__unknown
+t2511231211 d__Bacteria.p__Firmicutes.c__Bacilli.o__Lactobacillales.f__Streptococcaceae.g__Streptococcus.s__sp_.t__unknown
+t2512047075 d__Bacteria.p__Firmicutes.c__Bacilli.o__Lactobacillales.f__Streptococcaceae.g__Streptococcus.s__sp_.t__unknown
+t2511231092 d__Bacteria.p__Actinobacteria.c__Actinobacteria.o__Actinomycetales.f__Streptomycetaceae.g__Streptomyces.s__sp_.t__unknown
+t2511231200 d__Bacteria.p__Actinobacteria.c__Actinobacteria.o__Actinomycetales.f__Streptomycetaceae.g__Streptomyces.s__sp_.t__unknown
+t2511231113 d__Bacteria.p__Actinobacteria.c__Actinobacteria.o__Actinomycetales.f__Streptomycetaceae.g__Streptomyces.s__sp_.t__unknown
+t2511231140 d__Bacteria.p__Actinobacteria.c__Actinobacteria.o__Actinomycetales.f__Streptomycetaceae.g__Streptomyces.s__sp_.t__unknown
+t2503386004 d__Bacteria.p__Actinobacteria.c__Actinobacteria.o__Actinomycetales.f__Streptomycetaceae.g__Streptomyces.s__sp_.t__unknown
+t2510065021 d__Bacteria.p__Actinobacteria.c__Actinobacteria.o__Actinomycetales.f__Streptomycetaceae.g__Streptomyces.s__sp_.t__unknown
+t2506520015 d__Bacteria.p__Firmicutes.c__Clostridia.o__Clostridiales.f__Clostridiales Family XVII. Incertae Sedis.g__Sulfobacillus.s__sp_.t__unknown
+t2510917010 d__Bacteria.p__Firmicutes.c__Clostridia.o__Clostridiales.f__Clostridiales Family XVII. Incertae Sedis.g__Sulfobacillus.s__sp_.t__unknown
+t2506210005 d__Bacteria.p__Firmicutes.c__Clostridia.o__Clostridiales.f__Clostridiales Family XVII. Incertae Sedis.g__Sulfobacillus.s__sp_.t__unknown
+t2506783064 d__Bacteria.p__Proteobacteria.c__Epsilonproteobacteria.o__Campylobacterales.f__Campylobacteraceae.g__Sulfurospirillum.s__sp_.t__unknown
+t2507262052 d__Bacteria.p__Cyanobacteria.c__Synechococcophycidae.o__Synechococcales.f__Synechococcaceae.g__Synechococcus.s__sp_.t__unknown
+t2509601044 d__Bacteria.p__Proteobacteria.c__Deltaproteobacteria.o__Syntrophobacterales.f__Syntrophorhabdaceae.g__Syntrophorhabdus.s__sp_.t__unknown
+t2512047036 d__Bacteria.p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Porphyromonadaceae.g__Tannerella.s__sp_.t__unknown
+t2501416923 d__Bacteria.p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Porphyromonadaceae.g__Tannerella.s__forsythensis.t__ATCC 43037
+t2511231127 d__Bacteria.p__Proteobacteria.c__Betaproteobacteria.o__Burkholderiales.f__Alcaligenaceae.g__Taylorella.s__sp_.t__unknown
+t2510917000 d__Bacteria.p__Proteobacteria.c__Gammaproteobacteria.o__Alteromonadales.f__unclassified.g__Teredinibacter.s__sp_.t__unknown
+t2510461070 d__Bacteria.p__Acidobacteria.c__Acidobacteria.o__Acidobacteriales.f__Acidobacteriaceae.g__Terriglobus.s__sp_.t__unknown
+t2511231116 d__Bacteria.p__Firmicutes.c__Bacilli.o__Lactobacillales.f__Enterococcaceae.g__Tetragenococcus.s__sp_.t__unknown
+t2509601029 d__Bacteria.p__Firmicutes.c__Clostridia.o__Clostridiales.f__Clostridiales Family XVII. Incertae Sedis.g__Thermaerobacter.s__sp_.t__unknown
+t2503538017 d__Bacteria.p__Firmicutes.c__Clostridia.o__Thermoanaerobacterales.f__Thermoanaerobacteraceae.g__Thermanaeromonas.s__sp_.t__unknown
+t2508501068 d__Bacteria.p__Synergistetes.c__Synergistia.o__Synergistales.f__Synergistaceae.g__Thermanaerovibrio.s__sp_.t__unknown
+t2509276025 d__Bacteria.p__Firmicutes.c__Clostridia.o__Thermoanaerobacterales.f__Thermoanaerobacteraceae.g__Thermoanaerobacter.s__sp_.t__unknown
+t2504756058 d__Bacteria.p__Firmicutes.c__Clostridia.o__Thermoanaerobacterales.f__Thermoanaerobacteraceae.g__Thermoanaerobacter.s__sp_.t__unknown
+t2506783062 d__Bacteria.p__Firmicutes.c__Clostridia.o__Thermoanaerobacterales.f__Thermoanaerobacterales Family III. Incertae Sedis.g__Thermoanaerobacterium.s__sp_.t__unknown
+t2508501069 d__Bacteria.p__Firmicutes.c__Bacilli.o__Bacillales.f__Paenibacillaceae.g__Thermobacillus.s__sp_.t__unknown
+t2511231037 d__Bacteria.p__Aquificae.c__Aquificae.o__Aquificales.f__Aquificaceae.g__Thermocrinis.s__sp_.t__unknown
+t2512875013 d__Bacteria.p__Aquificae.c__Aquificae.o__Aquificales.f__Aquificaceae.g__Thermocrinis.s__sp_.t__unknown
+t2505119042 d__Bacteria.p__Thermodesulfobacteria.c__Thermodesulfobacteria.o__Thermodesulfobacteriales.f__Thermodesulfobacteriaceae.g__Thermodesulfatator.s__sp_.t__unknown
+t2504756006 d__Bacteria.p__Firmicutes.c__Clostridia.o__Thermoanaerobacterales.f__Thermodesulfobiaceae.g__Thermodesulfobium.s__sp_.t__unknown
+t2506783065 d__Bacteria.p__Thermotogae.c__Thermotogae.o__Thermotogales.f__Thermotogaceae.g__Thermotoga.s__sp_.t__unknown
+t2503508007 d__Bacteria.p__Thermotogae.c__Thermotogae.o__Thermotogales.f__Thermotogaceae.g__Thermotoga.s__sp_.t__unknown
+t2510065086 d__Bacteria.p__Thermotogae.c__Thermotogae.o__Thermotogales.f__unclassified.g__unclassified.s__sp_.t__unknown
+t2505119043 d__Bacteria.p__Synergistetes.c__Synergistia.o__Synergistales.f__Synergistaceae.g__Thermovirga.s__sp_.t__unknown
+t2508501045 d__Bacteria.p__Thermi.c__Thermi.o__Thermales.f__Thermaceae.g__Thermus.s__sp_.t__unknown
+t2511231187 d__Bacteria.p__Deinococcus-Thermus.c__Deinococci.o__Thermales.f__Thermaceae.g__Thermus.s__sp_.t__unknown
+t2508501108 d__Bacteria.p__Thermi.c__Thermi.o__Thermales.f__Thermaceae.g__Thermus.s__sp_.t__unknown
+t2505679077 d__Bacteria.p__Thermi.c__Thermi.o__Thermales.f__Thermaceae.g__Thermus.s__sp_.t__unknown
+t2506783063 d__Bacteria.p__Proteobacteria.c__Gammaproteobacteria.o__Thiotrichales.f__Piscirickettsiaceae.g__Thioalkalimicrobium.s__sp_.t__unknown
+t2505679009 d__Bacteria.p__Proteobacteria.c__Gammaproteobacteria.o__Thiotrichales.f__Piscirickettsiaceae.g__Thioalkalimicrobium.s__sp_.t__unknown
+t2512875033 d__Bacteria.p__Proteobacteria.c__Gammaproteobacteria.o__Chromatiales.f__Ectothiorhodospiraceae.g__Thioalkalivibrio.s__sp_.t__unknown
+t2506520043 d__Bacteria.p__Proteobacteria.c__Gammaproteobacteria.o__Chromatiales.f__Ectothiorhodospiraceae.g__Thioalkalivibrio.s__sp_.t__unknown
+t2508501107 d__Bacteria.p__Proteobacteria.c__Gammaproteobacteria.o__Chromatiales.f__Chromatiaceae.g__Thiocapsa.s__sp_.t__unknown
+t2508501051 d__Bacteria.p__Proteobacteria.c__Gammaproteobacteria.o__Chromatiales.f__Chromatiaceae.g__Thiocystis.s__sp_.t__unknown
+t2506783059 d__Bacteria.p__Proteobacteria.c__Gammaproteobacteria.o__Chromatiales.f__Chromatiaceae.g__Thioflavicoccus.s__sp_.t__unknown
+t2510065015 d__Bacteria.p__Proteobacteria.c__Gammaproteobacteria.o__Chromatiales.f__Chromatiaceae.g__Thiorhodococcus.s__sp_.t__unknown
+t2509276036 d__Bacteria.p__Proteobacteria.c__Gammaproteobacteria.o__Chromatiales.f__Ectothiorhodospiraceae.g__Thiorhodospira.s__sp_.t__unknown
+t2508501048 d__Bacteria.p__Proteobacteria.c__Gammaproteobacteria.o__Chromatiales.f__Chromatiaceae.g__Thiorhodovibrio.s__sp_.t__unknown
+t2506520049 d__Bacteria.p__Proteobacteria.c__Gammaproteobacteria.o__Thiotrichales.f__Thiotrichaceae.g__Thiothrix.s__sp_.t__unknown
+t2504756052 d__Bacteria.p__Spirochaetes.c__Spirochaetes.o__Spirochaetales.f__Treponemaceae.g__Treponema.s__sp_.t__unknown
+t2511231191 d__Bacteria.p__Spirochaetes.c__Spirochaetia.o__Spirochaetales.f__Spirochaetaceae.g__Treponema.s__sp_.t__unknown
+t2511231217 d__Bacteria.p__Spirochaetes.c__Spirochaetia.o__Spirochaetales.f__Spirochaetaceae.g__Treponema.s__sp_.t__unknown
+t2511231215 d__Bacteria.p__Spirochaetes.c__Spirochaetia.o__Spirochaetales.f__Spirochaetaceae.g__Treponema.s__sp_.t__unknown
+t2511231132 d__Bacteria.p__Spirochaetes.c__Spirochaetia.o__Spirochaetales.f__Spirochaetaceae.g__Treponema.s__sp_.t__unknown
+t2509276055 d__Bacteria.p__Spirochaetes.c__Spirochaetia.o__Spirochaetales.f__Spirochaetaceae.g__Treponema.s__sp_.t__unknown
+t2504557012 d__Bacteria.p__Spirochaetes.c__Spirochaetes.o__Spirochaetales.f__Treponemaceae.g__Treponema.s__sp_.t__unknown
+t2506520013 d__Bacteria.p__Spirochaetes.c__Spirochaetes.o__Leptospirales.f__Leptospiraceae.g__Turneriella.s__sp_.t__unknown
+t2512047076 d__Bacteria.p__Firmicutes.c__Negativicutes.o__Selenomonadales.f__Veillonellaceae.g__Veillonella.s__sp_.t__unknown
+t2512564028 d__Bacteria.p__Proteobacteria.c__Gammaproteobacteria.o__Vibrionales.f__Vibrionaceae.g__Vibrio.s__sp_.t__unknown
+t2511231085 d__Bacteria.p__Proteobacteria.c__Gammaproteobacteria.o__Vibrionales.f__Vibrionaceae.g__Vibrio.s__sp_.t__unknown
+t2511231097 d__Bacteria.p__Proteobacteria.c__Gammaproteobacteria.o__Vibrionales.f__Vibrionaceae.g__Vibrio.s__sp_.t__unknown
+t2512047077 d__Bacteria.p__Proteobacteria.c__Gammaproteobacteria.o__Vibrionales.f__Vibrionaceae.g__Vibrio.s__sp_.t__unknown
+t2512047078 d__Bacteria.p__Proteobacteria.c__Gammaproteobacteria.o__Vibrionales.f__Vibrionaceae.g__Vibrio.s__sp_.t__unknown
+t2512047079 d__Bacteria.p__Proteobacteria.c__Gammaproteobacteria.o__Vibrionales.f__Vibrionaceae.g__Vibrio.s__sp_.t__unknown
+t2511231129 d__Bacteria.p__Proteobacteria.c__Gammaproteobacteria.o__Vibrionales.f__Vibrionaceae.g__Vibrio.s__sp_.t__unknown
+t2512047080 d__Bacteria.p__Proteobacteria.c__Gammaproteobacteria.o__Vibrionales.f__Vibrionaceae.g__Vibrio.s__sp_.t__unknown
+t2512047081 d__Bacteria.p__Proteobacteria.c__Gammaproteobacteria.o__Vibrionales.f__Vibrionaceae.g__Vibrio.s__sp_.t__unknown
+t2511231135 d__Bacteria.p__Proteobacteria.c__Gammaproteobacteria.o__Enterobacteriales.f__Enterobacteriaceae.g__Wigglesworthia.s__sp_.t__unknown
+t2511231060 d__Bacteria.p__Proteobacteria.c__Gammaproteobacteria.o__Xanthomonadales.f__Xanthomonadaceae.g__Xanthomonas.s__sp_.t__unknown
+t2511231136 d__Bacteria.p__Proteobacteria.c__Gammaproteobacteria.o__Xanthomonadales.f__Xanthomonadaceae.g__Xanthomonas.s__sp_.t__unknown
+t2509276029 d__Bacteria.p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Prevotellaceae.g__Xylanibacter.s__sp_.t__unknown
+t2509601014 d__Bacteria.p__Proteobacteria.c__Gammaproteobacteria.o__Xanthomonadales.f__Xanthomonadaceae.g__Xylella.s__sp_.t__unknown
+t2511231145 d__Bacteria.p__Proteobacteria.c__Gammaproteobacteria.o__Enterobacteriales.f__Enterobacteriaceae.g__Yersinia.s__sp_.t__unknown
+t2511231104 d__Bacteria.p__Proteobacteria.c__Gammaproteobacteria.o__unclassified.f__unclassified.g__unclassified.s__sp_.t__unknown
diff --git a/examples/DisappearingMicrobiome/run.sh b/examples/DisappearingMicrobiome/run.sh
new file mode 100755
index 0000000..7bd707a
--- /dev/null
+++ b/examples/DisappearingMicrobiome/run.sh
@@ -0,0 +1,57 @@
+#!/bin/sh
+
+cp annot.txt annot3.txt
+
+# De Filippo
+for l in `cat genomes.all.txt | grep g__Prevotella | cut -f 1 | sed -n '0~4p'` ; do echo $l"\tring_width\t2\t8\n"$l"\tring_height\t2\t0.5\n"$l"\tring_shape\t2\tv\n"$l"\tring_color\t2\tg" >> annot3.txt ; done
+for l in `cat genomes.all.txt | grep g__Xylanibacter | cut -f 1` ; do echo $l"\tring_width\t2\t8\n"$l"\tring_height\t2\t0.5\n"$l"\tring_shape\t2\tv\n"$l"\tring_color\t2\tg" >> annot3.txt ; done
+for l in `cat genomes.all.txt | grep g__Treponema | cut -f 1 | sed -n '0~4p'` ; do echo $l"\tring_width\t2\t8\n"$l"\tring_height\t2\t0.5\n"$l"\tring_shape\t2\tv\n"$l"\tring_color\t2\tg" >> annot3.txt ; done
+for l in `cat genomes.all.txt | grep g__Butyrivibrio | cut -f 1` ; do echo $l"\tring_width\t2\t8\n"$l"\tring_height\t2\t0.5\n"$l"\tring_shape\t2\tv\n"$l"\tring_color\t2\tg" >> annot3.txt ; done
+
+# Yatsunenko
+for l in `cat genomes.all.txt | grep s__Streptococcus_alactolyticus | cut -f 1` ; do echo $l"\tring_width\t2\t8\n"$l"\tring_height\t2\t0.5\n"$l"\tring_shape\t2\tv\n"$l"\tring_color\t2\tr" >> annot3.txt ; done
+for l in `cat genomes.all.txt | grep g__Clostridium.s__leptum | cut -f 1` ; do echo $l"\tring_width\t2\t8\n"$l"\tring_height\t2\t0.5\n"$l"\tring_shape\t2\tv\n"$l"\tring_color\t2\tr" >> annot3.txt ; done
+for l in `cat genomes.all.txt | grep s__Clostridium_orbiscindens | cut -f 1` ; do echo $l"\tring_width\t2\t8\n"$l"\tring_height\t2\t0.5\n"$l"\tring_shape\t2\tv\n"$l"\tring_color\t2\tr" >> annot3.txt ; done
+for l in `cat genomes.all.txt | grep s__Clostridium_innocuum | cut -f 1` ; do echo $l"\tring_width\t2\t8\n"$l"\tring_height\t2\t0.5\n"$l"\tring_shape\t2\tv\n"$l"\tring_color\t2\tr" >> annot3.txt ; done
+
+for l in `cat genomes.all.txt | grep g__Lactobacillus.s__ruminis | cut -f 1` ; do echo $l"\tring_width\t2\t8\n"$l"\tring_height\t2\t0.5\n"$l"\tring_shape\t2\tv\n"$l"\tring_color\t2\tg" >> annot3.txt ; done
+for l in `cat genomes.all.txt | grep g__Eubacterium | cut -f 1` ; do echo $l"\tring_width\t2\t8\n"$l"\tring_height\t2\t0.5\n"$l"\tring_shape\t2\tv\n"$l"\tring_color\t2\tg" >> annot3.txt ; done
+for l in `cat genomes.all.txt | grep g__Dialister | cut -f 1` ; do echo $l"\tring_width\t2\t8\n"$l"\tring_height\t2\t0.5\n"$l"\tring_shape\t2\tv\n"$l"\tring_color\t2\tg" >> annot3.txt ; done
+for l in `cat genomes.all.txt | grep g__Oscillospira | cut -f 1` ; do echo $l"\tring_width\t2\t8\n"$l"\tring_height\t2\t0.5\n"$l"\tring_shape\t2\tv\n"$l"\tring_color\t2\tg" >> annot3.txt ; done
+
+# Clemente
+for l in `cat genomes.all.txt | grep g__Helicobacter | cut -f 1 | sed -n '0~6p'` ; do echo $l"\tring_width\t2\t8\n"$l"\tring_height\t2\t0.5\n"$l"\tring_shape\t2\tv\n"$l"\tring_color\t2\tg" >> annot3.txt ; done
+for l in `cat genomes.all.txt | grep g__Phascolarctobacterium | cut -f 1` ; do echo $l"\tring_width\t2\t8\n"$l"\tring_height\t2\t0.5\n"$l"\tring_shape\t2\tv\n"$l"\tring_color\t2\tg" >> annot3.txt ; done
+for l in `cat genomes.all.txt | grep g__Paraprevotella | cut -f 1` ; do echo $l"\tring_width\t2\t8\n"$l"\tring_height\t2\t0.5\n"$l"\tring_shape\t2\tv\n"$l"\tring_color\t2\tg" >> annot3.txt ; done
+for l in `cat genomes.all.txt | grep g__Anaeroplasma | cut -f 1` ; do echo $l"\tring_width\t2\t8\n"$l"\tring_height\t2\t0.5\n"$l"\tring_shape\t2\tv\n"$l"\tring_color\t2\tg" >> annot3.txt ; done
+for l in `cat genomes.all.txt | grep g__Bulleidia | cut -f 1` ; do echo $l"\tring_width\t2\t8\n"$l"\tring_height\t2\t0.5\n"$l"\tring_shape\t2\tv\n"$l"\tring_color\t2\tg" >> annot3.txt ; done
+for l in `cat genomes.all.txt | grep g__Gemella | cut -f 1` ; do echo $l"\tring_width\t2\t8\n"$l"\tring_height\t2\t0.5\n"$l"\tring_shape\t2\tv\n"$l"\tring_color\t2\tg" >> annot3.txt ; done
+
+for l in `cat genomes.all.txt | grep g__Coprococcus | cut -f 1` ; do echo $l"\tring_width\t2\t8\n"$l"\tring_height\t2\t0.5\n"$l"\tring_shape\t2\tv\n"$l"\tring_color\t2\tr" >> annot3.txt ; done
+
+#Martinez
+for l in `cat genomes.all.txt | grep g__Weissella | cut -f 1` ; do echo $l"\tring_width\t2\t8\n"$l"\tring_height\t2\t0.5\n"$l"\tring_shape\t2\tv\n"$l"\tring_color\t2\tg" >> annot3.txt ; done
+for l in `cat genomes.all.txt | grep g__Slackia | cut -f 1` ; do echo $l"\tring_width\t2\t8\n"$l"\tring_height\t2\t0.5\n"$l"\tring_shape\t2\tv\n"$l"\tring_color\t2\tg" >> annot3.txt ; done
+for l in `cat genomes.all.txt | grep g__Gemella | cut -f 1` ; do echo $l"\tring_width\t2\t8\n"$l"\tring_height\t2\t0.5\n"$l"\tring_shape\t2\tv\n"$l"\tring_color\t2\tg" >> annot3.txt ; done
+for l in `cat genomes.all.txt | grep g__Streptococcus | cut -f 1 | sed -n '0~14p'` ; do echo $l"\tring_width\t2\t8\n"$l"\tring_height\t2\t0.5\n"$l"\tring_shape\t2\tv\n"$l"\tring_color\t2\tg" >> annot3.txt ; done
+
+for l in `cat genomes.all.txt | grep g__Gordonibacter | cut -f 1` ; do echo $l"\tring_width\t2\t8\n"$l"\tring_height\t2\t0.5\n"$l"\tring_shape\t2\tv\n"$l"\tring_color\t2\tr" >> annot3.txt ; done
+for l in `cat genomes.all.txt | grep g__Odoribacter | cut -f 1` ; do echo $l"\tring_width\t2\t8\n"$l"\tring_height\t2\t0.5\n"$l"\tring_shape\t2\tv\n"$l"\tring_color\t2\tr" >> annot3.txt ; done
+
+
+# Obregon
+for l in `cat genomes.all.txt | grep g__Succinivibrio | cut -f 1` ; do echo $l"\tring_width\t2\t8\n"$l"\tring_height\t2\t0.5\n"$l"\tring_shape\t2\tv\n"$l"\tring_color\t2\tg" >> annot3.txt ; done
+for l in `cat genomes.all.txt | grep g__Catenibacterium | cut -f 1` ; do echo $l"\tring_width\t2\t8\n"$l"\tring_height\t2\t0.5\n"$l"\tring_shape\t2\tv\n"$l"\tring_color\t2\tg" >> annot3.txt ; done
+
+for l in `cat genomes.all.txt | grep g__Dorea | cut -f 1` ; do echo $l"\tring_width\t2\t8\n"$l"\tring_height\t2\t0.5\n"$l"\tring_shape\t2\tv\n"$l"\tring_color\t2\tr" >> annot3.txt ; done
+for l in `cat genomes.all.txt | grep g__Blautia | cut -f 1` ; do echo $l"\tring_width\t2\t8\n"$l"\tring_height\t2\t0.5\n"$l"\tring_shape\t2\tv\n"$l"\tring_color\t2\tr" >> annot3.txt ; done
+
+
+for l in `cat genomes.all.txt | grep g__Bacteroides | cut -f 1 | sed -n '0~14p'` ; do echo $l"\tring_width\t2\t8\n"$l"\tring_height\t2\t0.5\n"$l"\tring_shape\t2\tv\n"$l"\tring_color\t2\tr" >> annot3.txt ; done
+for l in `cat genomes.all.txt | grep g__Faecalibacterium | cut -f 1` ; do echo $l"\tring_width\t2\t8\n"$l"\tring_height\t2\t0.5\n"$l"\tring_shape\t2\tv\n"$l"\tring_color\t2\tr" >> annot3.txt ; done
+for l in `cat genomes.all.txt | grep g__Ruminococcus | cut -f 1` ; do echo $l"\tring_width\t2\t8\n"$l"\tring_height\t2\t0.5\n"$l"\tring_shape\t2\tv\n"$l"\tring_color\t2\tr" >> annot3.txt ; done
+
+
+graphlan_annotate.py DisMic.xml DisMic.annot.xml --annot annot3.txt
+graphlan.py DisMic.annot.xml DisMic.png --dpi 200 --size 15 --pad 0.6
+graphlan.py DisMic.annot.xml DisMic.svg --dpi 200 --size 15 --pad 0.6
diff --git a/examples/HMP_tree/annot.txt b/examples/HMP_tree/annot.txt
new file mode 100644
index 0000000..948303c
--- /dev/null
+++ b/examples/HMP_tree/annot.txt
@@ -0,0 +1,8866 @@
+title Human Microbiome Project species tree
+title_font_size 33
+total_plotted_degrees 340
+annotation_background_alpha 0.1
+start_rotation 270
+branch_bracket_width 0.0
+class_legend_font_size 24
+annotation_legend_font_size 24
+annotation_background_separation -0.03
+annotation_background_offset 0.0
+annotation_background_width 0.07
+branch_thickness 2.5
+ring_label_font_size 1 10
+ring_label_font_size 2 10
+ring_label_font_size 3 10
+ring_label_font_size 4 10
+ring_label_font_size 5 10
+ring_label_font_size 6 10
+ring_label_font_size 7 10
+ring_label_font_size 8 10
+clade_marker_size 10
+clade_marker_edge_width 0.8
+ring_internal_separator_thickness 1 0.5
+ring_separator_color 1 #888888
+ring_label 1 Stool (prevalence)
+ring_label_color 1 #0000FF
+ring_internal_separator_thickness 2 0.5
+ring_separator_color 2 #888888
+ring_label 2 Cheek (prevalence)
+ring_label_color 2 #FFA500
+ring_internal_separator_thickness 3 0.5
+ring_separator_color 3 #888888
+ring_label 3 Plaque (prevalence)
+ring_label_color 3 #FF0000
+ring_internal_separator_thickness 4 0.5
+ring_separator_color 4 #888888
+ring_label 4 Tongue (prevalence)
+ring_label_color 4 #800000
+ring_internal_separator_thickness 5 0.5
+ring_separator_color 5 #888888
+ring_label 5 Nose (prevalence)
+ring_label_color 5 #006400
+ring_internal_separator_thickness 6 0.5
+ring_separator_color 6 #888888
+ring_label 6 Vagina (prevalence)
+ring_label_color 6 #800080
+ring_internal_separator_thickness 7 0.5
+ring_separator_color 7 #888888
+ring_label 7 Skin (prevalence)
+ring_label_color 7 #696969
+ring_internal_separator_thickness 8 0.5
+ring_separator_color 8 #888888
+ring_label 8 Abundance when present
+ring_label_color 8 #696969
+t645951833 ring_color 8 #0000FF
+t645951833 ring_height 8 0.44330825
+t645951833 ring_width 8 0.7
+t643886217 ring_color 8 #800080
+t643886217 ring_height 8 3.4955655
+t643886217 ring_width 8 0.7
+t649989989 ring_color 8 #800000
+t649989989 ring_height 8 0.1198344
+t649989989 ring_width 8 0.7
+t641736205 ring_color 8 #0000FF
+t641736205 ring_height 8 1.0281943
+t641736205 ring_width 8 0.7
+t643886010 ring_color 8 #696969
+t643886010 ring_height 8 0.0881097
+t643886010 ring_width 8 0.7
+t643886074 ring_color 8 #800000
+t643886074 ring_height 8 0.33143285
+t643886074 ring_width 8 0.7
+t644736382 ring_color 8 #0000FF
+t644736382 ring_height 8 0.035
+t644736382 ring_width 8 0.7
+t651053056 ring_color 8 #0000FF
+t651053056 ring_height 8 0.035
+t651053056 ring_width 8 0.7
+t646862342 ring_color 8 #006400
+t646862342 ring_height 8 0.9083788
+t646862342 ring_width 8 0.7
+t645951817 ring_color 8 #800000
+t645951817 ring_height 8 0.0713286
+t645951817 ring_width 8 0.7
+t649633078 ring_color 8 #0000FF
+t649633078 ring_height 8 0.15575735
+t649633078 ring_width 8 0.7
+t646311941 ring_color 8 #0000FF
+t646311941 ring_height 8 0.035
+t646311941 ring_width 8 0.7
+t647000207 ring_color 8 #0000FF
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diff --git a/examples/HMP_tree/hmptree.xml b/examples/HMP_tree/hmptree.xml
new file mode 100644
index 0000000..9539feb
--- /dev/null
+++ b/examples/HMP_tree/hmptree.xml
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diff --git a/examples/HMP_tree/run.sh b/examples/HMP_tree/run.sh
new file mode 100755
index 0000000..122e316
--- /dev/null
+++ b/examples/HMP_tree/run.sh
@@ -0,0 +1,3 @@
+#!/bin/sh
+graphlan_annotate.py hmptree.xml hmptree.annot.xml --annot annot.txt
+graphlan.py hmptree.annot.xml hmptree.png --dpi 150 --size 14
diff --git a/examples/HMP_tree_simple/annot.txt b/examples/HMP_tree_simple/annot.txt
new file mode 100644
index 0000000..f6ae637
--- /dev/null
+++ b/examples/HMP_tree_simple/annot.txt
@@ -0,0 +1,756 @@
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diff --git a/examples/HMP_tree_simple/hmptree.xml b/examples/HMP_tree_simple/hmptree.xml
new file mode 100644
index 0000000..9539feb
--- /dev/null
+++ b/examples/HMP_tree_simple/hmptree.xml
@@ -0,0 +1,2694 @@
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diff --git a/examples/HMP_tree_simple/run.sh b/examples/HMP_tree_simple/run.sh
new file mode 100755
index 0000000..122e316
--- /dev/null
+++ b/examples/HMP_tree_simple/run.sh
@@ -0,0 +1,3 @@
+#!/bin/sh
+graphlan_annotate.py hmptree.xml hmptree.annot.xml --annot annot.txt
+graphlan.py hmptree.annot.xml hmptree.png --dpi 150 --size 14
diff --git a/examples/IBD_biogeography/IBDgeo.txt b/examples/IBD_biogeography/IBDgeo.txt
new file mode 100644
index 0000000..3eb1b41
--- /dev/null
+++ b/examples/IBD_biogeography/IBDgeo.txt
@@ -0,0 +1,220 @@
+Bacteria
+Firmicutes
+Firmicutes.Clostridia
+Firmicutes.Clostridia.Clostridiales
+Bacteroidetes
+Bacteroidetes.Bacteroidia.Bacteroidales
+Bacteroidetes.Bacteroidia.Bacteroidales.Bacteroidaceae.Bacteroides
+Firmicutes.Clostridia.Clostridiales.Lachnospiraceae
+Proteobacteria
+Firmicutes.Clostridia.Clostridiales.Ruminococcaceae
+Proteobacteria.Gammaproteobacteria
+Proteobacteria.Gammaproteobacteria.Enterobacteriales.Enterobacteriaceae
+Firmicutes.Clostridia.Clostridiales.Ruminococcaceae.Faecalibacterium
+Proteobacteria.Gammaproteobacteria.Enterobacteriales.Enterobacteriaceae.Escherichia/Shigella
+Firmicutes.Clostridia.Clostridiales.Lachnospiraceae.unclassified
+Firmicutes.Clostridia.Clostridiales.unclassified
+Firmicutes.Clostridia.Clostridiales.Lachnospiraceae.Coprococcus
+Firmicutes.Erysipelotrichi.Erysipelotrichales.Erysipelotrichaceae
+Firmicutes.Erysipelotrichi.Erysipelotrichales.Erysipelotrichaceae.Coprobacillus
+Bacteroidetes.Bacteroidia.Bacteroidales.Porphyromonadaceae
+Firmicutes.Clostridia.Clostridiales.Veillonellaceae
+Fusobacteria.Fusobacteria.Fusobacteriales
+Fusobacteria.Fusobacteria.Fusobacteriales.Fusobacteriaceae
+Firmicutes.Clostridia.Clostridiales.Ruminococcaceae.unclassified
+Proteobacteria.Gammaproteobacteria.Enterobacteriales.Enterobacteriaceae.unclassified
+Firmicutes.Clostridia.Clostridiales.Lachnospiraceae.Roseburia
+Fusobacteria.Fusobacteria.Fusobacteriales.Fusobacteriaceae.Fusobacterium
+Firmicutes.Clostridia.Clostridiales.Incertae_Sedis_XIV
+Firmicutes.Clostridia.Clostridiales.Incertae_Sedis_XIV.Blautia
+Bacteroidetes.Bacteroidia.Bacteroidales.Porphyromonadaceae.Parabacteroides
+Firmicutes.Clostridia.Clostridiales.Lachnospiraceae.Dorea
+Firmicutes.Bacilli
+Firmicutes.Bacilli.Lactobacillales
+Bacteroidetes.Bacteroidia.Bacteroidales.Rikenellaceae
+Bacteroidetes.Bacteroidia.Bacteroidales.Rikenellaceae.Alistipes
+Firmicutes.Clostridia.Clostridiales.Lachnospiraceae.Anaerostipes
+Firmicutes.Clostridia.Clostridiales.Clostridiaceae
+Firmicutes.Clostridia.Clostridiales.Clostridiaceae.Clostridium
+Firmicutes.Bacilli.Lactobacillales.Streptococcaceae
+Firmicutes.Bacilli.Lactobacillales.Streptococcaceae.Streptococcus
+Proteobacteria.Gammaproteobacteria.Pasteurellales.Pasteurellaceae
+Proteobacteria.Gammaproteobacteria.Pasteurellales.Pasteurellaceae.unclassified
+Firmicutes.Clostridia.Clostridiales.Veillonellaceae.Phascolarctobacterium
+Actinobacteria.Actinobacteria
+Firmicutes.Clostridia.Clostridiales.Ruminococcaceae.Subdoligranulum
+Firmicutes.Clostridia.Clostridiales.Eubacteriaceae
+Firmicutes.Clostridia.Clostridiales.Eubacteriaceae.Eubacterium
+Proteobacteria.Betaproteobacteria
+Proteobacteria.Betaproteobacteria.Burkholderiales
+Firmicutes.Clostridia.Clostridiales.Veillonellaceae.Veillonella
+Firmicutes.Clostridia.Clostridiales.Veillonellaceae.Acidaminococcus
+Firmicutes.unclassified
+Firmicutes.Clostridia.Clostridiales.Veillonellaceae.Dialister
+Bacteroidetes.Bacteroidia.Bacteroidales.Prevotellaceae
+Firmicutes.Clostridia.Clostridiales.Ruminococcaceae.Ruminococcus
+Actinobacteria.Actinobacteria.Coriobacteriales.Coriobacteriaceae
+Bacteroidetes.Bacteroidia.Bacteroidales.Prevotellaceae.Prevotella
+Fusobacteria.Fusobacteria.Fusobacteriales.Fusobacteriaceae.unclassified
+Actinobacteria.Actinobacteria.Coriobacteriales.Coriobacteriaceae.Collinsella
+Proteobacteria.Betaproteobacteria.Burkholderiales.Alcaligenaceae
+Firmicutes.Clostridia.Clostridiales.Ruminococcaceae.Butyricicoccus
+Proteobacteria.Gammaproteobacteria.Xanthomonadales.Xanthomonadaceae
+Proteobacteria.Gammaproteobacteria.Xanthomonadales.Xanthomonadaceae.Stenotrophomonas
+Proteobacteria.Gammaproteobacteria.Enterobacteriales.Enterobacteriaceae.Klebsiella
+Bacteroidetes.Bacteroidia.Bacteroidales.Porphyromonadaceae.Barnesiella
+Firmicutes.Clostridia.Clostridiales.Peptostreptococcaceae
+Proteobacteria.Betaproteobacteria.Burkholderiales.Comamonadaceae
+Firmicutes.Bacilli.Lactobacillales.Lactobacillaceae
+Firmicutes.Bacilli.Lactobacillales.Lactobacillaceae.Lactobacillus
+Bacteroidetes.Bacteroidia.Bacteroidales.Porphyromonadaceae.Odoribacter
+Actinobacteria.Actinobacteria.Bifidobacteriales.Bifidobacteriaceae
+Actinobacteria.Actinobacteria.Bifidobacteriales.Bifidobacteriaceae.Bifidobacterium
+Proteobacteria.Betaproteobacteria.Burkholderiales.Alcaligenaceae.Parasutterella
+Firmicutes.Clostridia.Clostridiales.Veillonellaceae.Megasphaera
+Firmicutes.Clostridia.Clostridiales.Peptostreptococcaceae.Sporacetigenium
+Proteobacteria.Betaproteobacteria.Burkholderiales.Comamonadaceae.Delftia
+Firmicutes.Erysipelotrichi.Erysipelotrichales.Erysipelotrichaceae.Catenibacterium
+Proteobacteria.Gammaproteobacteria.Pasteurellales.Pasteurellaceae.Haemophilus
+Firmicutes.Bacilli.Lactobacillales.Enterococcaceae
+Proteobacteria.Gammaproteobacteria.Enterobacteriales.Enterobacteriaceae.Cronobacter
+Firmicutes.Bacilli.Lactobacillales.Enterococcaceae.Enterococcus
+Proteobacteria.Gammaproteobacteria.Enterobacteriales.Enterobacteriaceae.Morganella
+Firmicutes.Erysipelotrichi.Erysipelotrichales.Erysipelotrichaceae.Holdemania
+Firmicutes.Clostridia.Clostridiales.Ruminococcaceae.Oscillibacter
+Actinobacteria.Actinobacteria.Actinomycetales
+Verrucomicrobia
+Verrucomicrobia.Verrucomicrobiae.Verrucomicrobiales.Verrucomicrobiaceae.Akkermansia
+Proteobacteria.Gammaproteobacteria.Pseudomonadales
+Firmicutes.Clostridia.Clostridiales.Veillonellaceae.unclassified
+Proteobacteria.Betaproteobacteria.Burkholderiales.Alcaligenaceae.Sutterella
+Firmicutes.Clostridia.Clostridiales.Clostridiaceae.unclassified
+Firmicutes.Bacilli.Bacillales
+Firmicutes.Bacilli.Bacillales.Staphylococcaceae
+Firmicutes.Clostridia.Clostridiales.Incertae_Sedis_XI
+Firmicutes.Erysipelotrichi.Erysipelotrichales.Erysipelotrichaceae.unclassified
+Proteobacteria.Gammaproteobacteria.Enterobacteriales.Enterobacteriaceae.Citrobacter
+Proteobacteria.Gammaproteobacteria.Pseudomonadales.Moraxellaceae
+Proteobacteria.Gammaproteobacteria.Pseudomonadales.Moraxellaceae.Acinetobacter
+Actinobacteria.Actinobacteria.Actinomycetales.Actinomycetaceae
+Actinobacteria.Actinobacteria.Actinomycetales.Actinomycetaceae.Actinomyces
+Firmicutes.Clostridia.Clostridiales.Veillonellaceae.Megamonas
+Firmicutes.Bacilli.Bacillales.Staphylococcaceae.Gemella
+Bacteroidetes.Bacteroidia.Bacteroidales.Prevotellaceae.Paraprevotella
+Proteobacteria.Gammaproteobacteria.Pseudomonadales.Pseudomonadaceae
+Firmicutes.Clostridia.Clostridiales.Incertae_Sedis_XI.Parvimonas
+Proteobacteria.Gammaproteobacteria.Pseudomonadales.Pseudomonadaceae.Pseudomonas
+Fusobacteria.Fusobacteria.Fusobacteriales.Fusobacteriaceae.Cetobacterium
+Proteobacteria.Alphaproteobacteria
+Firmicutes.Bacilli.Lactobacillales.Carnobacteriaceae
+Firmicutes.Bacilli.Lactobacillales.Carnobacteriaceae.Granulicatella
+Firmicutes.Clostridia.Clostridiales.Peptostreptococcaceae.unclassified
+Proteobacteria.Gammaproteobacteria.Enterobacteriales.Enterobacteriaceae.Proteus
+Bacteroidetes.Bacteroidia.Bacteroidales.Prevotellaceae.unclassified
+Bacteroidetes.Bacteroidia.Bacteroidales.Porphyromonadaceae.Butyricimonas
+Bacteroidetes.Bacteroidia.Bacteroidales.unclassified
+Bacteroidetes.unclassified
+Actinobacteria.Actinobacteria.Coriobacteriales.Coriobacteriaceae.Eggerthella
+Bacteroidetes.Bacteroidia.Bacteroidales.Porphyromonadaceae.Dysgonomonas
+Firmicutes.Clostridia.Clostridiales.Ruminococcaceae.Papillibacter
+Proteobacteria.Betaproteobacteria.Burkholderiales.Comamonadaceae.unclassified
+Proteobacteria.Gammaproteobacteria.Pasteurellales.Pasteurellaceae.Actinobacillus
+Proteobacteria.Betaproteobacteria.Burkholderiales.Burkholderiales_incertae_sedis.Aquabacterium
+Proteobacteria.Deltaproteobacteria
+Firmicutes.Clostridia.Clostridiales.Ruminococcaceae.Sporobacter
+Firmicutes.Bacilli.Bacillales.Staphylococcaceae.Staphylococcus
+Proteobacteria.Betaproteobacteria.Burkholderiales.Comamonadaceae.Acidovorax
+Proteobacteria.Betaproteobacteria.Neisseriales.Neisseriaceae
+Proteobacteria.Deltaproteobacteria.Desulfovibrionales
+Proteobacteria.Deltaproteobacteria.Desulfovibrionales.Desulfovibrionaceae
+Proteobacteria.Deltaproteobacteria.Desulfovibrionales.Desulfovibrionaceae.Desulfovibrio
+Actinobacteria.Actinobacteria.Actinomycetales.Microbacteriaceae
+Firmicutes.Clostridia.Clostridiales.Peptococcaceae
+Bacteroidetes.Bacteroidia.Bacteroidales.Porphyromonadaceae.unclassified
+Actinobacteria.Actinobacteria.Actinomycetales.Microbacteriaceae.Microbacterium
+Proteobacteria.Alphaproteobacteria.unclassified
+Proteobacteria.Alphaproteobacteria.Rhizobiales
+Proteobacteria.Betaproteobacteria.Burkholderiales.Oxalobacteraceae
+Proteobacteria.Betaproteobacteria.Neisseriales.Neisseriaceae.Neisseria
+Firmicutes.Clostridia.Clostridiales.Incertae_Sedis_XI.Finegoldia
+Proteobacteria.Betaproteobacteria.Burkholderiales.unclassified
+Firmicutes.Clostridia.Clostridiales.Peptococcaceae.Peptococcus
+Proteobacteria.Betaproteobacteria.Burkholderiales.Oxalobacteraceae.Herbaspirillum
+Firmicutes.Bacilli.Lactobacillales.unclassified
+Firmicutes.Clostridia.Clostridiales.Incertae_Sedis_XIII
+Proteobacteria.Alphaproteobacteria.Sphingomonadales.Sphingomonadaceae
+Actinobacteria.Actinobacteria.Actinomycetales.Propionibacteriaceae.Propionibacterium
+Firmicutes.Bacilli.Lactobacillales.Aerococcaceae
+Actinobacteria.Actinobacteria.Actinomycetales.Micrococcaceae
+Actinobacteria.Actinobacteria.Actinomycetales.Corynebacteriaceae.Corynebacterium
+Proteobacteria.unclassified
+Tenericutes.Mollicutes.Anaeroplasmatales.Anaeroplasmataceae
+Tenericutes.Mollicutes.Anaeroplasmatales.Anaeroplasmataceae.Anaeroplasma
+Bacteroidetes.Flavobacteria.Flavobacteriales.Flavobacteriaceae
+Firmicutes.Clostridia.Clostridiales.Ruminococcaceae.Anaerotruncus
+Firmicutes.Clostridia.unclassified
+Bacteroidetes.Sphingobacteria.Sphingobacteriales
+Proteobacteria.Betaproteobacteria.Burkholderiales.Burkholderiaceae
+Actinobacteria.Actinobacteria.Coriobacteriales.Coriobacteriaceae.Atopobium
+Proteobacteria.Alphaproteobacteria.Rhizobiales.Brucellaceae.Ochrobactrum
+Actinobacteria.Actinobacteria.Actinomycetales.Micrococcaceae.Rothia
+Actinobacteria.Actinobacteria.Coriobacteriales.Coriobacteriaceae.unclassified
+Firmicutes.Erysipelotrichi.Erysipelotrichales.Erysipelotrichaceae.Turicibacter
+Proteobacteria.Betaproteobacteria.Burkholderiales.Burkholderiaceae.Ralstonia
+Firmicutes.Bacilli.Lactobacillales.Aerococcaceae.Abiotrophia
+Firmicutes.Clostridia.Clostridiales.Eubacteriaceae.unclassified
+Firmicutes.Clostridia.Clostridiales.Veillonellaceae.Anaerosinus
+Firmicutes.Clostridia.Clostridiales.Incertae_Sedis_XI.Anaerococcus
+Bacteroidetes.Sphingobacteria.Sphingobacteriales.Cytophagaceae.Arcicella
+Cyanobacteria.Cyanobacteria.unclassified.Chloroplast
+Firmicutes.Clostridia.Clostridiales.Peptostreptococcaceae.Peptostreptococcus
+Firmicutes.Clostridia.Clostridiales.Incertae_Sedis_XIII.Anaerovorax
+Proteobacteria.Alphaproteobacteria.Sphingomonadales.Sphingomonadaceae.Sphingobium
+Bacteroidetes.Bacteroidia.Bacteroidales.Rikenellaceae.unclassified
+Bacteroidetes.Flavobacteria.Flavobacteriales.Flavobacteriaceae.Cloacibacterium
+Proteobacteria.Alphaproteobacteria.Sphingomonadales.Sphingomonadaceae.Sphingomonas
+Firmicutes.Clostridia.Clostridiales.Incertae_Sedis_XIV.Howardella
+Firmicutes.Clostridia.Clostridiales.Eubacteriaceae.Anaerofustis
+Firmicutes.Clostridia.Clostridiales.Incertae_Sedis_XIII.unclassified
+Firmicutes.Bacilli.Lactobacillales.Enterococcaceae.unclassified
+Proteobacteria.Gammaproteobacteria.Pasteurellales.Pasteurellaceae.Aggregatibacter
+Firmicutes.Clostridia.Clostridiales.Lachnospiraceae.Hespellia
+Firmicutes.Clostridia.Clostridiales.Ruminococcaceae.Acetivibrio
+Firmicutes.Clostridia.Clostridiales.Incertae_Sedis_XI.Peptoniphilus
+Proteobacteria.Gammaproteobacteria.Enterobacteriales.Enterobacteriaceae.Yersinia
+Proteobacteria.Betaproteobacteria.Neisseriales.Neisseriaceae.unclassified
+Firmicutes.Clostridia.Clostridiales.Ruminococcaceae.Anaerofilum
+Actinobacteria.Actinobacteria.Actinomycetales.Brevibacteriaceae.Brevibacterium
+Firmicutes.Clostridia.Clostridiales.Lachnospiraceae.Oribacterium
+Firmicutes.Bacilli.Lactobacillales.Lactobacillaceae.Pediococcus
+Bacteroidetes.Flavobacteria.Flavobacteriales.Flavobacteriaceae.Flavobacterium
+Firmicutes.Clostridia.Clostridiales.Peptococcaceae.unclassified
+Firmicutes.Bacilli.Lactobacillales.Aerococcaceae.unclassified
+Proteobacteria.Gammaproteobacteria.Oceanospirillales.Oceanospirillaceae.Marinomonas
+Firmicutes.Bacilli.Bacillales.Bacillaceae
+Firmicutes.Bacilli.Bacillales.Bacillaceae.Anoxybacillus
+Proteobacteria.Epsilonproteobacteria.Campylobacterales.Campylobacteraceae.Campylobacter
+Proteobacteria.Betaproteobacteria.Burkholderiales.Comamonadaceae.Roseateles
+Proteobacteria.Betaproteobacteria.Neisseriales.Neisseriaceae.Kingella
+Cyanobacteria.Cyanobacteria.unclassified.Chloroplast.Cryptomonadaceae
+Cyanobacteria.Cyanobacteria.unclassified.Chloroplast.Streptophyta
+Proteobacteria.Betaproteobacteria.Burkholderiales.Comamonadaceae.Comamonas
+Proteobacteria.Alphaproteobacteria.Rhizobiales.Bradyrhizobiaceae.Afipia
+Firmicutes.Clostridia.Clostridiales.Lachnospiraceae.Catonella
+Bacteroidetes.Sphingobacteria.Sphingobacteriales.Chitinophagaceae.Terrimonas
+Firmicutes.Clostridia.Clostridiales.Lachnospiraceae.Pseudobutyrivibrio
+Proteobacteria.Betaproteobacteria.Rhodocyclales.Rhodocyclaceae
+Firmicutes.Clostridia.Clostridiales.Incertae_Sedis_XIII.Mogibacterium
+Proteobacteria.Alphaproteobacteria.Rhizobiales.Phyllobacteriaceae.Phyllobacterium
+Proteobacteria.Gammaproteobacteria.Xanthomonadales.Xanthomonadaceae.unclassified
+Proteobacteria.Betaproteobacteria.Methylophilales.Methylophilaceae.Methylophilus
+Proteobacteria.Betaproteobacteria.Burkholderiales.Burkholderiaceae.Burkholderia
+Proteobacteria.Alphaproteobacteria.Rhodobacterales.Rhodobacteraceae.Paracoccus
+Proteobacteria.Gammaproteobacteria.Alteromonadales.Psychromonadaceae.Psychromonas
+Proteobacteria.Alphaproteobacteria.Rhizobiales.Methylobacteriaceae.Methylobacterium
+Proteobacteria.Betaproteobacteria.unclassified
+Firmicutes.Bacilli.unclassified
+Proteobacteria.Deltaproteobacteria.Bdellovibrionales.Bdellovibrionaceae.Bdellovibrio
+Firmicutes.Erysipelotrichi.Erysipelotrichales.Erysipelotrichaceae.Solobacterium
+Firmicutes.Clostridia.Clostridiales.Ruminococcaceae.Acetanaerobacterium
+Proteobacteria.Deltaproteobacteria.unclassified
diff --git a/examples/IBD_biogeography/annotation.txt b/examples/IBD_biogeography/annotation.txt
new file mode 100644
index 0000000..fc7cda6
--- /dev/null
+++ b/examples/IBD_biogeography/annotation.txt
@@ -0,0 +1,174 @@
+branch_thickness 2
+clade_marker_edge_width 1
+clade_marker_size 15
+6. Sigmoid colon / rectum clade_marker_color #000080
+6. Sigmoid colon / rectum clade_marker_size 35
+4. Transverse colon clade_marker_color r
+4. Transverse colon clade_marker_size 35
+2. Cecum clade_marker_color #9400d3
+2. Cecum clade_marker_size 35
+1. Terminal ileum clade_marker_color #008000
+1. Terminal ileum clade_marker_size 35
+3. Right colon clade_marker_color #d2691e
+3. Right colon clade_marker_size 35
+5. Left colon clade_marker_color #20b2aa
+5. Left colon clade_marker_size 35
+annotation_legend_font_size 11
+class_legend_marker_size 2
+class_legend_font_size 13
+internal_label 1 Ph.
+internal_label 2 Classes
+internal_label 3 Orders
+internal_label 4 Families
+internal_label 5 Genera
+total_plotted_degrees 330
+start_rotation 270
+branch_bracket_width 0.5
+branch_bracket_depth 0.75
+internal_labels_rotation 270
+Firmicutes.Clostridia.Clostridiales.Ruminococcaceae annotation_background_color #000080
+Firmicutes.Clostridia.Clostridiales.Ruminococcaceae.Faecalibacterium annotation_background_color #9400d3
+Firmicutes.Clostridia.Clostridiales.Ruminococcaceae.unclassified annotation_background_color #20b2aa
+Firmicutes.Clostridia.Clostridiales.Lachnospiraceae.Roseburia annotation_background_color #000080
+Firmicutes.Clostridia.Clostridiales.Ruminococcaceae.Oscillibacter annotation_background_color #000080
+Bacteroidetes.Bacteroidia.Bacteroidales.Rikenellaceae.Alistipes annotation_background_color #20b2aa
+Bacteroidetes.Bacteroidia.Bacteroidales.Rikenellaceae annotation_background_color #20b2aa
+Proteobacteria.Gammaproteobacteria.Enterobacteriales annotation_background_color #008000
+Proteobacteria.Gammaproteobacteria.Enterobacteriales.Enterobacteriaceae annotation_background_color #008000
+Fusobacteria.Fusobacteria.Fusobacteriales.Fusobacteriaceae annotation_background_color #d2691e
+Fusobacteria.Fusobacteria.Fusobacteriales annotation_background_color #d2691e
+Fusobacteria.Fusobacteria annotation_background_color #d2691e
+Fusobacteria annotation_background_color #d2691e
+Fusobacteria.Fusobacteria.Fusobacteriales.Fusobacteriaceae.Fusobacterium annotation_background_color #d2691e
+Firmicutes.Clostridia.Clostridiales.Ruminococcaceae.Ruminococcus annotation_background_color #000080
+Firmicutes.Clostridia.Clostridiales.Ruminococcaceae.Subdoligranulum annotation_background_color #000080
+Actinobacteria.Actinobacteria.Coriobacteriales.Coriobacteriaceae annotation_background_color r
+Actinobacteria.Actinobacteria.Coriobacteriales annotation_background_color r
+Firmicutes.Clostridia.Clostridiales annotation_background_color #000080
+Firmicutes.Clostridia annotation_background_color #000080
+Proteobacteria.Gammaproteobacteria.Enterobacteriales.Enterobacteriaceae.unclassified annotation_background_color #008000
+Actinobacteria.Actinobacteria.Actinomycetales.Actinomycetaceae.Actinomyces annotation_background_color #9400d3
+Actinobacteria.Actinobacteria.Actinomycetales.Actinomycetaceae annotation_background_color #9400d3
+Proteobacteria annotation_background_color #008000
+Actinobacteria.Actinobacteria.Coriobacteriales.Coriobacteriaceae.Collinsella annotation_background_color r
+Proteobacteria.Gammaproteobacteria.Enterobacteriales.Enterobacteriaceae.Cronobacter annotation_background_color #9400d3
+Firmicutes.Erysipelotrichi.Erysipelotrichales.Erysipelotrichaceae.unclassified annotation_background_color r
+Proteobacteria.Gammaproteobacteria annotation_background_color #008000
+Firmicutes annotation_background_color #000080
+Firmicutes.Clostridia.Clostridiales.Ruminococcaceae clade_marker_color #000080
+Firmicutes.Clostridia.Clostridiales.Ruminococcaceae.Faecalibacterium clade_marker_color #9400d3
+Firmicutes.Clostridia.Clostridiales.Ruminococcaceae.unclassified clade_marker_color #20b2aa
+Firmicutes.Clostridia.Clostridiales.Lachnospiraceae.Roseburia clade_marker_color #000080
+Firmicutes.Clostridia.Clostridiales.Ruminococcaceae.Oscillibacter clade_marker_color #000080
+Bacteroidetes.Bacteroidia.Bacteroidales.Rikenellaceae.Alistipes clade_marker_color #20b2aa
+Bacteroidetes.Bacteroidia.Bacteroidales.Rikenellaceae clade_marker_color #20b2aa
+Proteobacteria.Gammaproteobacteria.Enterobacteriales clade_marker_color #008000
+Proteobacteria.Gammaproteobacteria.Enterobacteriales.Enterobacteriaceae clade_marker_color #008000
+Fusobacteria.Fusobacteria.Fusobacteriales.Fusobacteriaceae clade_marker_color #d2691e
+Fusobacteria.Fusobacteria.Fusobacteriales clade_marker_color #d2691e
+Fusobacteria.Fusobacteria clade_marker_color #d2691e
+Fusobacteria clade_marker_color #d2691e
+Fusobacteria.Fusobacteria.Fusobacteriales.Fusobacteriaceae.Fusobacterium clade_marker_color #d2691e
+Firmicutes.Clostridia.Clostridiales.Ruminococcaceae.Ruminococcus clade_marker_color #000080
+Firmicutes.Clostridia.Clostridiales.Ruminococcaceae.Subdoligranulum clade_marker_color #000080
+Actinobacteria.Actinobacteria.Coriobacteriales.Coriobacteriaceae clade_marker_color r
+Actinobacteria.Actinobacteria.Coriobacteriales clade_marker_color r
+Firmicutes.Clostridia.Clostridiales clade_marker_color #000080
+Firmicutes.Clostridia clade_marker_color #000080
+Proteobacteria.Gammaproteobacteria.Enterobacteriales.Enterobacteriaceae.unclassified clade_marker_color #008000
+Actinobacteria.Actinobacteria.Actinomycetales.Actinomycetaceae.Actinomyces clade_marker_color #9400d3
+Actinobacteria.Actinobacteria.Actinomycetales.Actinomycetaceae clade_marker_color #9400d3
+Proteobacteria clade_marker_color #008000
+Actinobacteria.Actinobacteria.Coriobacteriales.Coriobacteriaceae.Collinsella clade_marker_color r
+Proteobacteria.Gammaproteobacteria.Enterobacteriales.Enterobacteriaceae.Cronobacter clade_marker_color #9400d3
+Firmicutes.Erysipelotrichi.Erysipelotrichales.Erysipelotrichaceae.unclassified clade_marker_color r
+Proteobacteria.Gammaproteobacteria clade_marker_color #008000
+Firmicutes clade_marker_color #000080
+Firmicutes.Clostridia.Clostridiales.Ruminococcaceae clade_marker_size 100
+Firmicutes.Clostridia.Clostridiales.Ruminococcaceae.Faecalibacterium clade_marker_size 100
+Firmicutes.Clostridia.Clostridiales.Ruminococcaceae.unclassified clade_marker_size 100
+Firmicutes.Clostridia.Clostridiales.Lachnospiraceae.Roseburia clade_marker_size 100
+Firmicutes.Clostridia.Clostridiales.Ruminococcaceae.Oscillibacter clade_marker_size 100
+Bacteroidetes.Bacteroidia.Bacteroidales.Rikenellaceae.Alistipes clade_marker_size 100
+Bacteroidetes.Bacteroidia.Bacteroidales.Rikenellaceae clade_marker_size 100
+Proteobacteria.Gammaproteobacteria.Enterobacteriales clade_marker_size 100
+Proteobacteria.Gammaproteobacteria.Enterobacteriales.Enterobacteriaceae clade_marker_size 100
+Fusobacteria.Fusobacteria.Fusobacteriales.Fusobacteriaceae clade_marker_size 100
+Fusobacteria.Fusobacteria.Fusobacteriales clade_marker_size 100
+Fusobacteria.Fusobacteria clade_marker_size 100
+Fusobacteria clade_marker_size 100
+Fusobacteria.Fusobacteria.Fusobacteriales.Fusobacteriaceae.Fusobacterium clade_marker_size 100
+Firmicutes.Clostridia.Clostridiales.Ruminococcaceae.Ruminococcus clade_marker_size 100
+Firmicutes.Clostridia.Clostridiales.Ruminococcaceae.Subdoligranulum clade_marker_size 100
+Actinobacteria.Actinobacteria.Coriobacteriales.Coriobacteriaceae clade_marker_size 100
+Actinobacteria.Actinobacteria.Coriobacteriales clade_marker_size 100
+Firmicutes.Clostridia.Clostridiales clade_marker_size 100
+Firmicutes.Clostridia clade_marker_size 100
+Proteobacteria.Gammaproteobacteria.Enterobacteriales.Enterobacteriaceae.unclassified clade_marker_size 100
+Actinobacteria.Actinobacteria.Actinomycetales.Actinomycetaceae.Actinomyces clade_marker_size 100
+Actinobacteria.Actinobacteria.Actinomycetales.Actinomycetaceae clade_marker_size 100
+Proteobacteria clade_marker_size 100
+Actinobacteria.Actinobacteria.Coriobacteriales.Coriobacteriaceae.Collinsella clade_marker_size 100
+Proteobacteria.Gammaproteobacteria.Enterobacteriales.Enterobacteriaceae.Cronobacter clade_marker_size 100
+Firmicutes.Erysipelotrichi.Erysipelotrichales.Erysipelotrichaceae.unclassified clade_marker_size 100
+Proteobacteria.Gammaproteobacteria clade_marker_size 100
+Firmicutes clade_marker_size 100
+Firmicutes.Clostridia.Clostridiales.Ruminococcaceae annotation *
+Bacteroidetes.Bacteroidia.Bacteroidales.Rikenellaceae annotation *
+Proteobacteria.Gammaproteobacteria.Enterobacteriales annotation *
+Proteobacteria.Gammaproteobacteria.Enterobacteriales.Enterobacteriaceae annotation *
+Fusobacteria.Fusobacteria.Fusobacteriales.Fusobacteriaceae annotation *:*
+Fusobacteria.Fusobacteria.Fusobacteriales annotation *:*
+Fusobacteria.Fusobacteria annotation *
+Fusobacteria annotation *
+Actinobacteria.Actinobacteria.Coriobacteriales.Coriobacteriaceae annotation *:*
+Actinobacteria.Actinobacteria.Coriobacteriales annotation *
+Firmicutes.Clostridia.Clostridiales annotation *
+Firmicutes.Clostridia annotation *
+Actinobacteria.Actinobacteria.Actinomycetales.Actinomycetaceae annotation *:*
+Proteobacteria annotation *
+Proteobacteria.Gammaproteobacteria annotation *
+Firmicutes annotation *
+Firmicutes.Clostridia.Clostridiales.Ruminococcaceae annotation_font_size 11
+Bacteroidetes.Bacteroidia.Bacteroidales.Rikenellaceae annotation_font_size 11
+Proteobacteria.Gammaproteobacteria.Enterobacteriales annotation_font_size 11
+Proteobacteria.Gammaproteobacteria.Enterobacteriales.Enterobacteriaceae annotation_font_size 11
+Fusobacteria.Fusobacteria.Fusobacteriales.Fusobacteriaceae annotation_font_size 11
+Fusobacteria.Fusobacteria.Fusobacteriales annotation_font_size 11
+Fusobacteria.Fusobacteria annotation_font_size 11
+Fusobacteria annotation_font_size 11
+Actinobacteria.Actinobacteria.Coriobacteriales.Coriobacteriaceae annotation_font_size 11
+Actinobacteria.Actinobacteria.Coriobacteriales annotation_font_size 11
+Firmicutes.Clostridia.Clostridiales annotation_font_size 11
+Firmicutes.Clostridia annotation_font_size 11
+Actinobacteria.Actinobacteria.Actinomycetales.Actinomycetaceae annotation_font_size 11
+Proteobacteria annotation_font_size 11
+Proteobacteria.Gammaproteobacteria annotation_font_size 11
+Firmicutes annotation_font_size 11
+Firmicutes.Clostridia.Clostridiales.Ruminococcaceae.Faecalibacterium annotation *:*
+Firmicutes.Clostridia.Clostridiales.Ruminococcaceae.unclassified annotation *:Ruminicoccaceae uncl.
+Firmicutes.Clostridia.Clostridiales.Lachnospiraceae.Roseburia annotation *
+Firmicutes.Clostridia.Clostridiales.Ruminococcaceae.Oscillibacter annotation *:*
+Bacteroidetes.Bacteroidia.Bacteroidales.Rikenellaceae.Alistipes annotation *
+Fusobacteria.Fusobacteria.Fusobacteriales.Fusobacteriaceae.Fusobacterium annotation *:*
+Firmicutes.Clostridia.Clostridiales.Ruminococcaceae.Ruminococcus annotation *:*
+Firmicutes.Clostridia.Clostridiales.Ruminococcaceae.Subdoligranulum annotation *:*
+Proteobacteria.Gammaproteobacteria.Enterobacteriales.Enterobacteriaceae.unclassified annotation *:Enterobacteriaceae uncl.
+Actinobacteria.Actinobacteria.Actinomycetales.Actinomycetaceae.Actinomyces annotation *:*
+Actinobacteria.Actinobacteria.Coriobacteriales.Coriobacteriaceae.Collinsella annotation *:*
+Proteobacteria.Gammaproteobacteria.Enterobacteriales.Enterobacteriaceae.Cronobacter annotation *:*
+Firmicutes.Erysipelotrichi.Erysipelotrichales.Erysipelotrichaceae.unclassified annotation Erysipelotrichaceae uncl.
+Firmicutes.Clostridia.Clostridiales.Ruminococcaceae.Faecalibacterium annotation_font_size 11
+Firmicutes.Clostridia.Clostridiales.Ruminococcaceae.unclassified annotation_font_size 11
+Firmicutes.Clostridia.Clostridiales.Lachnospiraceae.Roseburia annotation_font_size 11
+Firmicutes.Clostridia.Clostridiales.Ruminococcaceae.Oscillibacter annotation_font_size 11
+Bacteroidetes.Bacteroidia.Bacteroidales.Rikenellaceae.Alistipes annotation_font_size 11
+Fusobacteria.Fusobacteria.Fusobacteriales.Fusobacteriaceae.Fusobacterium annotation_font_size 11
+Firmicutes.Clostridia.Clostridiales.Ruminococcaceae.Ruminococcus annotation_font_size 11
+Firmicutes.Clostridia.Clostridiales.Ruminococcaceae.Subdoligranulum annotation_font_size 11
+Proteobacteria.Gammaproteobacteria.Enterobacteriales.Enterobacteriaceae.unclassified annotation_font_size 11
+Actinobacteria.Actinobacteria.Actinomycetales.Actinomycetaceae.Actinomyces annotation_font_size 11
+Actinobacteria.Actinobacteria.Coriobacteriales.Coriobacteriaceae.Collinsella annotation_font_size 11
+Proteobacteria.Gammaproteobacteria.Enterobacteriales.Enterobacteriaceae.Cronobacter annotation_font_size 11
+Firmicutes.Erysipelotrichi.Erysipelotrichales.Erysipelotrichaceae.unclassified annotation_font_size 11
+clade_separation .75
diff --git a/examples/IBD_biogeography/run.sh b/examples/IBD_biogeography/run.sh
new file mode 100755
index 0000000..a1ce497
--- /dev/null
+++ b/examples/IBD_biogeography/run.sh
@@ -0,0 +1,3 @@
+#!/bin/sh
+graphlan_annotate.py IBDgeo.txt IBDgeo.annot.xml --annot annotation.txt
+graphlan.py IBDgeo.annot.xml IBDgeo.png --dpi 150
diff --git a/examples/PhyloPhlAn/annot.txt b/examples/PhyloPhlAn/annot.txt
new file mode 100644
index 0000000..1ed85f2
--- /dev/null
+++ b/examples/PhyloPhlAn/annot.txt
@@ -0,0 +1,22293 @@
+title PhyloPhlAn tree of life (3,737 genomes)
+title_font_size 25
+total_plotted_degrees 350
+start_rotation 90
+class_legend_font_size 12
+annotation_legend_font_size 11
+branch_bracket_depth 0.0
+clade_marker_size 3.0
+annotation_background_separation -.24
+annotation_background_offset -0.21
+annotation_background_width 0.03
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+Streptococcus annotation Streptococcus
+Streptococcus annotation_background_color k
+Streptococcus clade_marker_color k
+Streptococcus clade_marker_size 40
+Bacillus annotation Bacillus
+Bacillus annotation_background_color k
+Bacillus clade_marker_color k
+Bacillus clade_marker_size 40
+Escherichia annotation Escherichia
+Escherichia annotation_background_color k
+Escherichia clade_marker_color k
+Escherichia clade_marker_size 40
+Lactobacillus annotation Lactobacillus
+Lactobacillus annotation_background_color k
+Lactobacillus clade_marker_color k
+Lactobacillus clade_marker_size 40
+Staphylococcus annotation Staphylococcus
+Staphylococcus annotation_background_color k
+Staphylococcus clade_marker_color k
+Staphylococcus clade_marker_size 40
+Clostridium annotation Clostridium
+Clostridium annotation_background_color k
+Clostridium clade_marker_color k
+Clostridium clade_marker_size 40
+Burkholderia annotation Burkholderia
+Burkholderia annotation_background_color k
+Burkholderia clade_marker_color k
+Burkholderia clade_marker_size 40
+Mycobacterium annotation Mycobacterium
+Mycobacterium annotation_background_color k
+Mycobacterium clade_marker_color k
+Mycobacterium clade_marker_size 40
+Vibrio annotation Vibrio
+Vibrio annotation_background_color k
+Vibrio clade_marker_color k
+Vibrio clade_marker_size 40
+Enterococcus annotation Enterococcus
+Enterococcus annotation_background_color k
+Enterococcus clade_marker_color k
+Enterococcus clade_marker_size 40
+Pseudomonas annotation r:Pseudomonas
+Pseudomonas annotation_background_color k
+Pseudomonas clade_marker_color k
+Pseudomonas clade_marker_size 40
+Bacteroides annotation k:Bacteroides
+Bacteroides annotation_background_color k
+Bacteroides clade_marker_color k
+Bacteroides clade_marker_size 40
+Salmonella annotation Salmonella
+Salmonella annotation_background_color k
+Salmonella clade_marker_color k
+Salmonella clade_marker_size 40
+Corynebacterium annotation f:Corynebacterium
+Corynebacterium annotation_background_color k
+Corynebacterium clade_marker_color k
+Corynebacterium clade_marker_size 40
+Helicobacter annotation l:Helicobacter
+Helicobacter annotation_background_color k
+Helicobacter clade_marker_color k
+Helicobacter clade_marker_size 40
+Brucella annotation Brucella
+Brucella annotation_background_color k
+Brucella clade_marker_color k
+Brucella clade_marker_size 40
+Neisseria annotation Neisseria
+Neisseria annotation_background_color k
+Neisseria clade_marker_color k
+Neisseria clade_marker_size 40
+Rickettsia annotation Rickettsia
+Rickettsia annotation_background_color k
+Rickettsia clade_marker_color k
+Rickettsia clade_marker_size 40
+Yersinia annotation Yersinia
+Yersinia annotation_background_color k
+Yersinia clade_marker_color k
+Yersinia clade_marker_size 40
+Bifidobacterium annotation e:Bifidobacterium
+Bifidobacterium annotation_background_color k
+Bifidobacterium clade_marker_color k
+Bifidobacterium clade_marker_size 40
+Listeria annotation Listeria
+Listeria annotation_background_color k
+Listeria clade_marker_color k
+Listeria clade_marker_size 40
+Streptomyces annotation b:Streptomyces
+Streptomyces annotation_background_color k
+Streptomyces clade_marker_color k
+Streptomyces clade_marker_size 40
+Prevotella annotation Prevotella
+Prevotella annotation_background_color k
+Prevotella clade_marker_color k
+Prevotella clade_marker_size 40
+Chlamydia annotation h:Chlamydia
+Chlamydia annotation_background_color k
+Chlamydia clade_marker_color k
+Chlamydia clade_marker_size 40
+Campylobacter annotation Campylobacter
+Campylobacter annotation_background_color k
+Campylobacter clade_marker_color k
+Campylobacter clade_marker_size 40
+Haemophilus annotation t:Haemophilus
+Haemophilus annotation_background_color k
+Haemophilus clade_marker_color k
+Haemophilus clade_marker_size 40
+Acinetobacter annotation q:Acinetobacter
+Acinetobacter annotation_background_color k
+Acinetobacter clade_marker_color k
+Acinetobacter clade_marker_size 40
+Borrelia annotation j:Borrelia
+Borrelia annotation_background_color k
+Borrelia clade_marker_color k
+Borrelia clade_marker_size 40
+Shewanella annotation Shewanella
+Shewanella annotation_background_color k
+Shewanella clade_marker_color k
+Shewanella clade_marker_size 40
+Francisella annotation p:Francisella
+Francisella annotation_background_color k
+Francisella clade_marker_color k
+Francisella clade_marker_size 40
+Rhizobium annotation n:Rhizobium
+Rhizobium annotation_background_color k
+Rhizobium clade_marker_color k
+Rhizobium clade_marker_size 40
+Fusobacterium annotation a:Fusobacterium
+Fusobacterium annotation_background_color k
+Fusobacterium clade_marker_color k
+Fusobacterium clade_marker_size 40
+Actinobacillus annotation s:Actinobacillus
+Actinobacillus annotation_background_color k
+Actinobacillus clade_marker_color k
+Actinobacillus clade_marker_size 40
+Xanthomonas annotation o:Xanthomonas
+Xanthomonas annotation_background_color k
+Xanthomonas clade_marker_color k
+Xanthomonas clade_marker_size 40
+Chlamydophila annotation g:Chlamydophila
+Chlamydophila annotation_background_color k
+Chlamydophila clade_marker_color k
+Chlamydophila clade_marker_size 40
+Treponema annotation i:Treponema
+Treponema annotation_background_color k
+Treponema clade_marker_color k
+Treponema clade_marker_size 40
+Propionibacterium annotation c:Propionibacterium
+Propionibacterium annotation_background_color k
+Propionibacterium clade_marker_color k
+Propionibacterium clade_marker_size 40
+Desulfovibrio annotation Desulfovibrio
+Desulfovibrio annotation_background_color k
+Desulfovibrio clade_marker_color k
+Desulfovibrio clade_marker_size 40
+Sulfolobus annotation Sulfolobus
+Sulfolobus annotation_background_color k
+Sulfolobus clade_marker_color k
+Sulfolobus clade_marker_size 40
+Buchnera clade_marker_color k
+Buchnera clade_marker_size 40
+Actinomyces annotation d:Actinomyces
+Actinomyces annotation_background_color k
+Actinomyces clade_marker_color k
+Actinomyces clade_marker_size 40
+Prochlorococcus annotation Prochlorococcus
+Prochlorococcus annotation_background_color k
+Prochlorococcus clade_marker_color k
+Prochlorococcus clade_marker_size 40
+Acetobacter annotation m:Acetobacter
+Acetobacter annotation_background_color k
+Acetobacter clade_marker_color k
+Acetobacter clade_marker_size 40
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+t645951871 clade_marker_color #8DEEEE
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+Tenericutes annotation Tenericutes
+Tenericutes clade_marker_color #8DEEEE
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+Cyanobacteria annotation Cyanobacteria
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+t637000327 clade_marker_color #006400
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+t646862348 clade_marker_color #006400
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+t2511231191 clade_marker_color #006400
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+t637000328 clade_marker_color #006400
+t637000328 clade_marker_size 30
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+t642555166 clade_marker_color #006400
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+t2511231217 clade_marker_color #006400
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+t2511231215 clade_marker_color #006400
+t2511231215 clade_marker_size 30
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+t2511231132 clade_marker_color #006400
+t2511231132 clade_marker_size 30
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+t650716101 clade_marker_color #006400
+t650716101 clade_marker_size 30
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+t649990026 clade_marker_color #006400
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+t650716102 clade_marker_color #006400
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+t2509276055 clade_marker_color #006400
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+t2504557012 clade_marker_color #006400
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+t645951869 clade_marker_color #006400
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+t2506520013 clade_marker_color #006400
+t2506520013 clade_marker_size 30
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+Spirochaetes annotation Spirochaetes
+Spirochaetes clade_marker_color #006400
+Spirochaetes clade_marker_size 75
+t637000059 clade_marker_color #800080
+t637000059 clade_marker_size 30
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+t637000059 ring_color 1 #800080
+t637000062 clade_marker_color #800080
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+t648276628 clade_marker_color #800080
+t648276628 clade_marker_size 30
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+t645951815 clade_marker_color #800080
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+t645951815 ring_color 1 #800080
+t645951807 clade_marker_color #800080
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+t637000063 clade_marker_color #800080
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+t2511231082 clade_marker_color #800080
+t2511231082 clade_marker_size 30
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+t2511231138 clade_marker_color #800080
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+t644736342 clade_marker_color #800080
+t644736342 clade_marker_size 30
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+t644736342 ring_color 1 #800080
+t644736343 clade_marker_color #800080
+t644736343 clade_marker_size 30
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+t646862311 clade_marker_color #800080
+t646862311 clade_marker_size 30
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+t646862311 ring_color 1 #800080
+t646862312 clade_marker_color #800080
+t646862312 clade_marker_size 30
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+t637000064 clade_marker_color #800080
+t637000064 clade_marker_size 30
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+t637000064 ring_color 1 #800080
+t645058724 clade_marker_color #800080
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+t646862313 clade_marker_color #800080
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+t2512564068 clade_marker_color #800080
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+t646862314 clade_marker_color #800080
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+t650377921 clade_marker_color #800080
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+t646862315 clade_marker_color #800080
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+t2512564063 clade_marker_color #800080
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+t646862316 clade_marker_color #800080
+t646862316 clade_marker_size 30
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+t2511231213 clade_marker_color #800080
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+t646862317 clade_marker_color #800080
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+t644736341 clade_marker_color #800080
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+t644736344 clade_marker_color #800080
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+t650716021 clade_marker_color #800080
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+t648276629 clade_marker_color #800080
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+t645058818 clade_marker_color #800080
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+t650716023 clade_marker_color #800080
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+t651053015 clade_marker_color #800080
+t651053015 clade_marker_size 30
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+t651053015 ring_color 1 #800080
+t651053016 clade_marker_color #800080
+t651053016 clade_marker_size 30
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+t651053016 ring_color 1 #800080
+t651324022 clade_marker_color #800080
+t651324022 clade_marker_size 30
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+t650377922 clade_marker_color #800080
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+t650377922 ring_color 1 #800080
+t647000287 clade_marker_color #800080
+t647000287 clade_marker_size 30
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+t650716071 clade_marker_color #800080
+t650716071 clade_marker_size 30
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+t650716085 clade_marker_color #800080
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+t646564588 clade_marker_color #800080
+t646564588 clade_marker_size 30
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+Chlamydiae annotation Chlamydiae
+Chlamydiae clade_marker_color #800080
+Chlamydiae clade_marker_size 75
+t650716001 clade_marker_color #808080
+t650716001 clade_marker_size 30
+t650716001 clade_marker_edge_width 0.1
+t650716001 ring_color 1 #808080
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+t648028003 ring_color 1 #808080
+t638154501 clade_marker_color #808080
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+t641228483 clade_marker_color #808080
+t641228483 clade_marker_size 30
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+t641228483 ring_color 1 #808080
+t641522611 clade_marker_color #808080
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+t641522611 ring_color 1 #808080
+t651324076 clade_marker_color #808080
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+t651324018 clade_marker_color #808080
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+t643348540 clade_marker_color #808080
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+t640069314 clade_marker_color #808080
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+t640753029 clade_marker_color #808080
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+t648028035 clade_marker_color #808080
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+t650716051 clade_marker_color #808080
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+t640427120 clade_marker_color #808080
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+t641228499 clade_marker_color #808080
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+t638154513 clade_marker_color #808080
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+t640427135 clade_marker_color #808080
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+t640069326 clade_marker_color #808080
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+t639633053 clade_marker_color #808080
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+t640069332 clade_marker_color #808080
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+t638154517 clade_marker_color #808080
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+t650377981 clade_marker_color #808080
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+t646311959 clade_marker_color #808080
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+t643692047 clade_marker_color #808080
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+t650377982 clade_marker_color #808080
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+t643692048 clade_marker_color #808080
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+t643692049 clade_marker_color #808080
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+t646862347 ring_color 1 #808080
+t649990020 clade_marker_color #808080
+t649990020 clade_marker_size 30
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+t638154518 clade_marker_color #808080
+t638154518 clade_marker_size 30
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+t638154519 clade_marker_color #808080
+t638154519 clade_marker_size 30
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+t639633064 clade_marker_color #808080
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+t641522657 clade_marker_color #808080
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+t650716098 clade_marker_color #808080
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+t646564583 clade_marker_color #808080
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+t648028062 clade_marker_color #808080
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+t650377985 clade_marker_color #808080
+t650377985 clade_marker_size 30
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+t650377985 ring_color 1 #808080
+Crenarchaeota annotation Crenarchaeota
+Crenarchaeota clade_marker_color #808080
+Crenarchaeota clade_marker_size 75
+t645951804 clade_marker_color #FFC0CB
+t645951804 clade_marker_size 30
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+t645951804 ring_color 1 #FFC0CB
+t646206254 clade_marker_color #FFC0CB
+t646206254 clade_marker_size 30
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+t646206254 ring_color 1 #FFC0CB
+t647000254 clade_marker_color #FFC0CB
+t647000254 clade_marker_size 30
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+t647000254 ring_color 1 #FFC0CB
+t637000117 clade_marker_color #FFC0CB
+t637000117 clade_marker_size 30
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+t637000117 ring_color 1 #FFC0CB
+t641736256 clade_marker_color #FFC0CB
+t641736256 clade_marker_size 30
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+t641736256 ring_color 1 #FFC0CB
+t638341097 clade_marker_color #FFC0CB
+t638341097 clade_marker_size 30
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+t638341097 ring_color 1 #FFC0CB
+t645951848 clade_marker_color #FFC0CB
+t645951848 clade_marker_size 30
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+t651324032 clade_marker_color #FFC0CB
+t651324032 clade_marker_size 30
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+t647533168 clade_marker_color #FFC0CB
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+t651324033 clade_marker_color #FFC0CB
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+t646206262 clade_marker_color #FFC0CB
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+t647533169 clade_marker_color #FFC0CB
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+t647533170 clade_marker_color #FFC0CB
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+t647533170 ring_color 1 #FFC0CB
+t647533171 clade_marker_color #FFC0CB
+t647533171 clade_marker_size 30
+t647533171 clade_marker_edge_width 0.1
+t647533171 ring_color 1 #FFC0CB
+t645951866 clade_marker_color #FFC0CB
+t645951866 clade_marker_size 30
+t645951866 clade_marker_edge_width 0.1
+t645951866 ring_color 1 #FFC0CB
+t646206253 clade_marker_color #FFC0CB
+t646206253 clade_marker_size 30
+t646206253 clade_marker_edge_width 0.1
+t646206253 ring_color 1 #FFC0CB
+t646206252 clade_marker_color #FFC0CB
+t646206252 clade_marker_size 30
+t646206252 clade_marker_edge_width 0.1
+t646206252 ring_color 1 #FFC0CB
+t645058833 clade_marker_color #FFC0CB
+t645058833 clade_marker_size 30
+t645058833 clade_marker_edge_width 0.1
+t645058833 ring_color 1 #FFC0CB
+t645951850 clade_marker_color #FFC0CB
+t645951850 clade_marker_size 30
+t645951850 clade_marker_edge_width 0.1
+t645951850 ring_color 1 #FFC0CB
+t645951859 clade_marker_color #FFC0CB
+t645951859 clade_marker_size 30
+t645951859 clade_marker_edge_width 0.1
+t645951859 ring_color 1 #FFC0CB
+t646206275 clade_marker_color #FFC0CB
+t646206275 clade_marker_size 30
+t646206275 clade_marker_edge_width 0.1
+t646206275 ring_color 1 #FFC0CB
+t649633056 clade_marker_color #FFC0CB
+t649633056 clade_marker_size 30
+t649633056 clade_marker_edge_width 0.1
+t649633056 ring_color 1 #FFC0CB
+t644736384 clade_marker_color #FFC0CB
+t644736384 clade_marker_size 30
+t644736384 clade_marker_edge_width 0.1
+t644736384 ring_color 1 #FFC0CB
+t647000268 clade_marker_color #FFC0CB
+t647000268 clade_marker_size 30
+t647000268 clade_marker_edge_width 0.1
+t647000268 ring_color 1 #FFC0CB
+t2506520045 clade_marker_color #FFC0CB
+t2506520045 clade_marker_size 30
+t2506520045 clade_marker_edge_width 0.1
+t2506520045 ring_color 1 #FFC0CB
+t645951860 clade_marker_color #FFC0CB
+t645951860 clade_marker_size 30
+t645951860 clade_marker_edge_width 0.1
+t645951860 ring_color 1 #FFC0CB
+t646311952 clade_marker_color #FFC0CB
+t646311952 clade_marker_size 30
+t646311952 clade_marker_edge_width 0.1
+t646311952 ring_color 1 #FFC0CB
+t646311956 clade_marker_color #FFC0CB
+t646311956 clade_marker_size 30
+t646311956 clade_marker_edge_width 0.1
+t646311956 ring_color 1 #FFC0CB
+Fusobacteria annotation Fusobacteria
+Fusobacteria clade_marker_color #FFC0CB
+Fusobacteria clade_marker_size 75
+t643692020 clade_marker_color #B0171F
+t643692020 clade_marker_size 30
+t643692020 clade_marker_edge_width 0.1
+t643692020 ring_color 1 #B0171F
+t641228488 clade_marker_color #B0171F
+t641228488 clade_marker_size 30
+t641228488 clade_marker_edge_width 0.1
+t641228488 ring_color 1 #B0171F
+t2509276064 clade_marker_color #B0171F
+t2509276064 clade_marker_size 30
+t2509276064 clade_marker_edge_width 0.1
+t2509276064 ring_color 1 #B0171F
+t649633034 clade_marker_color #B0171F
+t649633034 clade_marker_size 30
+t649633034 clade_marker_edge_width 0.1
+t649633034 ring_color 1 #B0171F
+t2509276065 clade_marker_color #B0171F
+t2509276065 clade_marker_size 30
+t2509276065 clade_marker_edge_width 0.1
+t2509276065 ring_color 1 #B0171F
+t2508501115 clade_marker_color #B0171F
+t2508501115 clade_marker_size 30
+t2508501115 clade_marker_edge_width 0.1
+t2508501115 ring_color 1 #B0171F
+t649633035 clade_marker_color #B0171F
+t649633035 clade_marker_size 30
+t649633035 clade_marker_edge_width 0.1
+t649633035 ring_color 1 #B0171F
+t637000092 clade_marker_color #B0171F
+t637000092 clade_marker_size 30
+t637000092 clade_marker_edge_width 0.1
+t637000092 ring_color 1 #B0171F
+t2504643006 clade_marker_color #B0171F
+t2504643006 clade_marker_size 30
+t2504643006 clade_marker_edge_width 0.1
+t2504643006 ring_color 1 #B0171F
+t2510065032 clade_marker_color #B0171F
+t2510065032 clade_marker_size 30
+t2510065032 clade_marker_edge_width 0.1
+t2510065032 ring_color 1 #B0171F
+t646564545 clade_marker_color #B0171F
+t646564545 clade_marker_size 30
+t646564545 clade_marker_edge_width 0.1
+t646564545 ring_color 1 #B0171F
+t646564546 clade_marker_color #B0171F
+t646564546 clade_marker_size 30
+t646564546 clade_marker_edge_width 0.1
+t646564546 ring_color 1 #B0171F
+t649633077 clade_marker_color #B0171F
+t649633077 clade_marker_size 30
+t649633077 clade_marker_edge_width 0.1
+t649633077 ring_color 1 #B0171F
+t645058872 clade_marker_color #B0171F
+t645058872 clade_marker_size 30
+t645058872 clade_marker_edge_width 0.1
+t645058872 ring_color 1 #B0171F
+t2508501045 clade_marker_color #B0171F
+t2508501045 clade_marker_size 30
+t2508501045 clade_marker_edge_width 0.1
+t2508501045 ring_color 1 #B0171F
+t649633105 clade_marker_color #B0171F
+t649633105 clade_marker_size 30
+t649633105 clade_marker_edge_width 0.1
+t649633105 ring_color 1 #B0171F
+t637000322 clade_marker_color #B0171F
+t637000322 clade_marker_size 30
+t637000322 clade_marker_edge_width 0.1
+t637000322 ring_color 1 #B0171F
+t637000323 clade_marker_color #B0171F
+t637000323 clade_marker_size 30
+t637000323 clade_marker_edge_width 0.1
+t637000323 ring_color 1 #B0171F
+t2508501108 clade_marker_color #B0171F
+t2508501108 clade_marker_size 30
+t2508501108 clade_marker_edge_width 0.1
+t2508501108 ring_color 1 #B0171F
+t2505679077 clade_marker_color #B0171F
+t2505679077 clade_marker_size 30
+t2505679077 clade_marker_edge_width 0.1
+t2505679077 ring_color 1 #B0171F
+t646564586 clade_marker_color #B0171F
+t646564586 clade_marker_size 30
+t646564586 clade_marker_edge_width 0.1
+t646564586 ring_color 1 #B0171F
+Thermi annotation Thermi
+Thermi clade_marker_color #B0171F
+Thermi clade_marker_size 75
+t649633005 clade_marker_color #191970
+t649633005 clade_marker_size 30
+t649633005 clade_marker_edge_width 0.1
+t649633005 ring_color 1 #191970
+t643348527 clade_marker_color #191970
+t643348527 clade_marker_size 30
+t643348527 clade_marker_edge_width 0.1
+t643348527 ring_color 1 #191970
+t641228485 clade_marker_color #191970
+t641228485 clade_marker_size 30
+t641228485 clade_marker_edge_width 0.1
+t641228485 ring_color 1 #191970
+t2506520040 clade_marker_color #191970
+t2506520040 clade_marker_size 30
+t2506520040 clade_marker_edge_width 0.1
+t2506520040 ring_color 1 #191970
+t643692015 clade_marker_color #191970
+t643692015 clade_marker_size 30
+t643692015 clade_marker_edge_width 0.1
+t643692015 ring_color 1 #191970
+t637000089 clade_marker_color #191970
+t637000089 clade_marker_size 30
+t637000089 clade_marker_edge_width 0.1
+t637000089 ring_color 1 #191970
+t640427111 clade_marker_color #191970
+t640427111 clade_marker_size 30
+t640427111 clade_marker_edge_width 0.1
+t640427111 ring_color 1 #191970
+t637000090 clade_marker_color #191970
+t637000090 clade_marker_size 30
+t637000090 clade_marker_edge_width 0.1
+t637000090 ring_color 1 #191970
+t646564526 clade_marker_color #191970
+t646564526 clade_marker_size 30
+t646564526 clade_marker_edge_width 0.1
+t646564526 ring_color 1 #191970
+t646311919 clade_marker_color #191970
+t646311919 clade_marker_size 30
+t646311919 clade_marker_edge_width 0.1
+t646311919 ring_color 1 #191970
+t648028022 clade_marker_color #191970
+t648028022 clade_marker_size 30
+t648028022 clade_marker_edge_width 0.1
+t648028022 ring_color 1 #191970
+t2508501111 clade_marker_color #191970
+t2508501111 clade_marker_size 30
+t2508501111 clade_marker_edge_width 0.1
+t2508501111 ring_color 1 #191970
+t641228494 clade_marker_color #191970
+t641228494 clade_marker_size 30
+t641228494 clade_marker_edge_width 0.1
+t641228494 ring_color 1 #191970
+t648276680 clade_marker_color #191970
+t648276680 clade_marker_size 30
+t648276680 clade_marker_edge_width 0.1
+t648276680 ring_color 1 #191970
+t649989977 clade_marker_color #191970
+t649989977 clade_marker_size 30
+t649989977 clade_marker_edge_width 0.1
+t649989977 ring_color 1 #191970
+t640753047 clade_marker_color #191970
+t640753047 clade_marker_size 30
+t640753047 clade_marker_edge_width 0.1
+t640753047 ring_color 1 #191970
+t640427139 clade_marker_color #191970
+t640427139 clade_marker_size 30
+t640427139 clade_marker_edge_width 0.1
+t640427139 ring_color 1 #191970
+t646311953 clade_marker_color #191970
+t646311953 clade_marker_size 30
+t646311953 clade_marker_edge_width 0.1
+t646311953 ring_color 1 #191970
+t646311962 clade_marker_color #191970
+t646311962 clade_marker_size 30
+t646311962 clade_marker_edge_width 0.1
+t646311962 ring_color 1 #191970
+t643348582 clade_marker_color #191970
+t643348582 clade_marker_size 30
+t643348582 clade_marker_edge_width 0.1
+t643348582 ring_color 1 #191970
+Chloroflexi annotation Chloroflexi
+Chloroflexi clade_marker_color #191970
+Chloroflexi clade_marker_size 75
+t640753026 clade_marker_color #7B68EE
+t640753026 clade_marker_size 30
+t640753026 clade_marker_edge_width 0.1
+t640753026 ring_color 1 #7B68EE
+t2507149014 clade_marker_color #7B68EE
+t2507149014 clade_marker_size 30
+t2507149014 clade_marker_edge_width 0.1
+t2507149014 ring_color 1 #7B68EE
+t644736379 clade_marker_color #7B68EE
+t644736379 clade_marker_size 30
+t644736379 clade_marker_edge_width 0.1
+t644736379 ring_color 1 #7B68EE
+t647533182 clade_marker_color #7B68EE
+t647533182 clade_marker_size 30
+t647533182 clade_marker_edge_width 0.1
+t647533182 ring_color 1 #7B68EE
+t2508501120 clade_marker_color #7B68EE
+t2508501120 clade_marker_size 30
+t2508501120 clade_marker_edge_width 0.1
+t2508501120 ring_color 1 #7B68EE
+t641228500 clade_marker_color #7B68EE
+t641228500 clade_marker_size 30
+t641228500 clade_marker_edge_width 0.1
+t641228500 ring_color 1 #7B68EE
+t643348583 clade_marker_color #7B68EE
+t643348583 clade_marker_size 30
+t643348583 clade_marker_edge_width 0.1
+t643348583 ring_color 1 #7B68EE
+t640753057 clade_marker_color #7B68EE
+t640753057 clade_marker_size 30
+t640753057 clade_marker_edge_width 0.1
+t640753057 ring_color 1 #7B68EE
+t641228511 clade_marker_color #7B68EE
+t641228511 clade_marker_size 30
+t641228511 clade_marker_edge_width 0.1
+t641228511 ring_color 1 #7B68EE
+t637000321 clade_marker_color #7B68EE
+t637000321 clade_marker_size 30
+t637000321 clade_marker_edge_width 0.1
+t637000321 ring_color 1 #7B68EE
+t2506783065 clade_marker_color #7B68EE
+t2506783065 clade_marker_size 30
+t2506783065 clade_marker_edge_width 0.1
+t2506783065 ring_color 1 #7B68EE
+t646311964 clade_marker_color #7B68EE
+t646311964 clade_marker_size 30
+t646311964 clade_marker_edge_width 0.1
+t646311964 ring_color 1 #7B68EE
+t643348584 clade_marker_color #7B68EE
+t643348584 clade_marker_size 30
+t643348584 clade_marker_edge_width 0.1
+t643348584 ring_color 1 #7B68EE
+t640427150 clade_marker_color #7B68EE
+t640427150 clade_marker_size 30
+t640427150 clade_marker_edge_width 0.1
+t640427150 ring_color 1 #7B68EE
+t642487181 clade_marker_color #7B68EE
+t642487181 clade_marker_size 30
+t642487181 clade_marker_edge_width 0.1
+t642487181 ring_color 1 #7B68EE
+t2503508007 clade_marker_color #7B68EE
+t2503508007 clade_marker_size 30
+t2503508007 clade_marker_edge_width 0.1
+t2503508007 ring_color 1 #7B68EE
+t2510065086 clade_marker_color #7B68EE
+t2510065086 clade_marker_size 30
+t2510065086 clade_marker_edge_width 0.1
+t2510065086 ring_color 1 #7B68EE
+t648276752 clade_marker_color #7B68EE
+t648276752 clade_marker_size 30
+t648276752 clade_marker_edge_width 0.1
+t648276752 ring_color 1 #7B68EE
+Thermotogae annotation Thermotogae
+Thermotogae clade_marker_color #7B68EE
+Thermotogae clade_marker_size 75
+t637000010 clade_marker_color #00CD00
+t637000010 clade_marker_size 30
+t637000010 clade_marker_edge_width 0.1
+t637000010 ring_color 1 #00CD00
+t649633039 clade_marker_color #00CD00
+t649633039 clade_marker_size 30
+t649633039 clade_marker_edge_width 0.1
+t649633039 ring_color 1 #00CD00
+t641380441 clade_marker_color #00CD00
+t641380441 clade_marker_size 30
+t641380441 clade_marker_edge_width 0.1
+t641380441 ring_color 1 #00CD00
+t650377953 clade_marker_color #00CD00
+t650377953 clade_marker_size 30
+t650377953 clade_marker_edge_width 0.1
+t650377953 ring_color 1 #00CD00
+t646311936 clade_marker_color #00CD00
+t646311936 clade_marker_size 30
+t646311936 clade_marker_edge_width 0.1
+t646311936 ring_color 1 #00CD00
+t2507262044 clade_marker_color #00CD00
+t2507262044 clade_marker_size 30
+t2507262044 clade_marker_edge_width 0.1
+t2507262044 ring_color 1 #00CD00
+t647000261 clade_marker_color #00CD00
+t647000261 clade_marker_size 30
+t647000261 clade_marker_edge_width 0.1
+t647000261 ring_color 1 #00CD00
+t642555132 clade_marker_color #00CD00
+t642555132 clade_marker_size 30
+t642555132 clade_marker_edge_width 0.1
+t642555132 ring_color 1 #00CD00
+t643692030 clade_marker_color #00CD00
+t643692030 clade_marker_size 30
+t643692030 clade_marker_edge_width 0.1
+t643692030 ring_color 1 #00CD00
+t643692050 clade_marker_color #00CD00
+t643692050 clade_marker_size 30
+t643692050 clade_marker_edge_width 0.1
+t643692050 ring_color 1 #00CD00
+t642555165 clade_marker_color #00CD00
+t642555165 clade_marker_size 30
+t642555165 clade_marker_edge_width 0.1
+t642555165 ring_color 1 #00CD00
+t645058708 clade_marker_color #00CD00
+t645058708 clade_marker_size 30
+t645058708 clade_marker_edge_width 0.1
+t645058708 ring_color 1 #00CD00
+t646564582 clade_marker_color #00CD00
+t646564582 clade_marker_size 30
+t646564582 clade_marker_edge_width 0.1
+t646564582 ring_color 1 #00CD00
+t2511231037 clade_marker_color #00CD00
+t2511231037 clade_marker_size 30
+t2511231037 clade_marker_edge_width 0.1
+t2511231037 ring_color 1 #00CD00
+t2512875013 clade_marker_color #00CD00
+t2512875013 clade_marker_size 30
+t2512875013 clade_marker_edge_width 0.1
+t2512875013 ring_color 1 #00CD00
+t649633104 clade_marker_color #00CD00
+t649633104 clade_marker_size 30
+t649633104 clade_marker_edge_width 0.1
+t649633104 ring_color 1 #00CD00
+Aquificae annotation Aquificae
+Aquificae clade_marker_color #00CD00
+Aquificae clade_marker_size 75
+t646564503 clade_marker_color #8B4513
+t646564503 clade_marker_size 30
+t646564503 clade_marker_edge_width 0.1
+t646564503 ring_color 1 #8B4513
+t2502790015 clade_marker_color #8B4513
+t2502790015 clade_marker_size 30
+t2502790015 clade_marker_edge_width 0.1
+t2502790015 ring_color 1 #8B4513
+t647000209 clade_marker_color #8B4513
+t647000209 clade_marker_size 30
+t647000209 clade_marker_edge_width 0.1
+t647000209 ring_color 1 #8B4513
+t2509601011 clade_marker_color #8B4513
+t2509601011 clade_marker_size 30
+t2509601011 clade_marker_edge_width 0.1
+t2509601011 ring_color 1 #8B4513
+t2510065052 clade_marker_color #8B4513
+t2510065052 clade_marker_size 30
+t2510065052 clade_marker_edge_width 0.1
+t2510065052 ring_color 1 #8B4513
+t2501533205 clade_marker_color #8B4513
+t2501533205 clade_marker_size 30
+t2501533205 clade_marker_edge_width 0.1
+t2501533205 ring_color 1 #8B4513
+t2508501103 clade_marker_color #8B4513
+t2508501103 clade_marker_size 30
+t2508501103 clade_marker_edge_width 0.1
+t2508501103 ring_color 1 #8B4513
+t645951855 clade_marker_color #8B4513
+t645951855 clade_marker_size 30
+t645951855 clade_marker_edge_width 0.1
+t645951855 ring_color 1 #8B4513
+t647000302 clade_marker_color #8B4513
+t647000302 clade_marker_size 30
+t647000302 clade_marker_edge_width 0.1
+t647000302 ring_color 1 #8B4513
+t650377983 clade_marker_color #8B4513
+t650377983 clade_marker_size 30
+t650377983 clade_marker_edge_width 0.1
+t650377983 ring_color 1 #8B4513
+t646311961 clade_marker_color #8B4513
+t646311961 clade_marker_size 30
+t646311961 clade_marker_edge_width 0.1
+t646311961 ring_color 1 #8B4513
+t2508501068 clade_marker_color #8B4513
+t2508501068 clade_marker_size 30
+t2508501068 clade_marker_edge_width 0.1
+t2508501068 ring_color 1 #8B4513
+t2505119043 clade_marker_color #8B4513
+t2505119043 clade_marker_size 30
+t2505119043 clade_marker_edge_width 0.1
+t2505119043 ring_color 1 #8B4513
+Synergistetes annotation Synergistetes
+Synergistetes clade_marker_color #8B4513
+Synergistetes clade_marker_size 75
+t642555120 clade_marker_color #BC8F8F
+t642555120 clade_marker_size 30
+t642555120 clade_marker_edge_width 0.1
+t642555120 ring_color 1 #BC8F8F
+t637000072 clade_marker_color #BC8F8F
+t637000072 clade_marker_size 30
+t637000072 clade_marker_edge_width 0.1
+t637000072 ring_color 1 #BC8F8F
+t638341060 clade_marker_color #BC8F8F
+t638341060 clade_marker_size 30
+t638341060 clade_marker_edge_width 0.1
+t638341060 ring_color 1 #BC8F8F
+t642555121 clade_marker_color #BC8F8F
+t642555121 clade_marker_size 30
+t642555121 clade_marker_edge_width 0.1
+t642555121 ring_color 1 #BC8F8F
+t642555122 clade_marker_color #BC8F8F
+t642555122 clade_marker_size 30
+t642555122 clade_marker_edge_width 0.1
+t642555122 ring_color 1 #BC8F8F
+t639633020 clade_marker_color #BC8F8F
+t639633020 clade_marker_size 30
+t639633020 clade_marker_edge_width 0.1
+t639633020 ring_color 1 #BC8F8F
+t640427130 clade_marker_color #BC8F8F
+t640427130 clade_marker_size 30
+t640427130 clade_marker_edge_width 0.1
+t640427130 ring_color 1 #BC8F8F
+t637000073 clade_marker_color #BC8F8F
+t637000073 clade_marker_size 30
+t637000073 clade_marker_edge_width 0.1
+t637000073 ring_color 1 #BC8F8F
+t642555123 clade_marker_color #BC8F8F
+t642555123 clade_marker_size 30
+t642555123 clade_marker_edge_width 0.1
+t642555123 ring_color 1 #BC8F8F
+t637000205 clade_marker_color #BC8F8F
+t637000205 clade_marker_size 30
+t637000205 clade_marker_edge_width 0.1
+t637000205 ring_color 1 #BC8F8F
+t642555146 clade_marker_color #BC8F8F
+t642555146 clade_marker_size 30
+t642555146 clade_marker_edge_width 0.1
+t642555146 ring_color 1 #BC8F8F
+t642555149 clade_marker_color #BC8F8F
+t642555149 clade_marker_size 30
+t642555149 clade_marker_edge_width 0.1
+t642555149 ring_color 1 #BC8F8F
+Chlorobi annotation Chlorobi
+Chlorobi clade_marker_color #BC8F8F
+Chlorobi clade_marker_size 75
+t642555104 clade_marker_color #303030
+t642555104 clade_marker_size 30
+t642555104 clade_marker_edge_width 0.1
+t642555104 ring_color 1 #303030
+t642791618 clade_marker_color #303030
+t642791618 clade_marker_size 30
+t642791618 clade_marker_edge_width 0.1
+t642791618 ring_color 1 #303030
+t646564524 clade_marker_color #303030
+t646564524 clade_marker_size 30
+t646564524 clade_marker_edge_width 0.1
+t646564524 ring_color 1 #303030
+t642555138 clade_marker_color #303030
+t642555138 clade_marker_size 30
+t642555138 clade_marker_edge_width 0.1
+t642555138 ring_color 1 #303030
+t2508501067 clade_marker_color #303030
+t2508501067 clade_marker_size 30
+t2508501067 clade_marker_edge_width 0.1
+t2508501067 ring_color 1 #303030
+t640963002 clade_marker_color #303030
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+t640963002 clade_marker_edge_width 0.1
+t640963002 ring_color 1 #303030
+t2510065049 clade_marker_color #303030
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+t641522643 clade_marker_color #303030
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+t645058870 clade_marker_color #303030
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+t641736179 clade_marker_size 30
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+Verrucomicrobia annotation Verrucomicrobia
+Verrucomicrobia clade_marker_color #303030
+Verrucomicrobia clade_marker_size 75
+t638341020 clade_marker_color #8E8E38
+t638341020 clade_marker_size 30
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+t642555116 clade_marker_color #8E8E38
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+Planctomycetes annotation Planctomycetes
+Planctomycetes clade_marker_color #8E8E38
+Planctomycetes clade_marker_size 75
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+t643692001 clade_marker_size 30
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+t648276601 clade_marker_color #CDCDC1
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+t649633002 clade_marker_color #CDCDC1
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+t2509601028 clade_marker_color #CDCDC1
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+t637000001 clade_marker_color #CDCDC1
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+t639633060 clade_marker_color #CDCDC1
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+t2510461070 clade_marker_color #CDCDC1
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+t649633100 clade_marker_color #CDCDC1
+t649633100 clade_marker_size 30
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+Acidobacteria annotation Acidobacteria
+Acidobacteria clade_marker_color #CDCDC1
+Acidobacteria clade_marker_size 75
+Other annotation Other
+Other clade_marker_color k
+Other clade_marker_size 75
diff --git a/examples/PhyloPhlAn/ppa_tol.xml b/examples/PhyloPhlAn/ppa_tol.xml
new file mode 100644
index 0000000..3d95766
--- /dev/null
+++ b/examples/PhyloPhlAn/ppa_tol.xml
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+ <phy:branch_length>0.344644451746</phy:branch_length>
+ <phy:clade>
+ <phy:name>t640427121</phy:name>
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+ </phy:clade>
+ <phy:clade>
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+ <phy:clade>
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+ </phy:clade>
+ <phy:clade>
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+ <phy:branch_length>0.00608925057435</phy:branch_length>
+ </phy:clade>
+ </phy:clade>
+ </phy:clade>
+ </phy:clade>
+ </phy:clade>
+ </phy:clade>
+ </phy:clade>
+ </phy:clade>
+ </phy:clade>
+ </phy:clade>
+ <phy:clade>
+ <phy:branch_length>0.120750687232</phy:branch_length>
+ <phy:clade>
+ <phy:branch_length>0.552283735515</phy:branch_length>
+ <phy:clade>
+ <phy:name>t646564534</phy:name>
+ <phy:branch_length>0.351623782051</phy:branch_length>
+ </phy:clade>
+ <phy:clade>
+ <phy:branch_length>0.10359421847</phy:branch_length>
+ <phy:clade>
+ <phy:name>t646311906</phy:name>
+ <phy:branch_length>0.379540674835</phy:branch_length>
+ </phy:clade>
+ <phy:clade>
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+ <phy:branch_length>0.340473673494</phy:branch_length>
+ </phy:clade>
+ </phy:clade>
+ </phy:clade>
+ <phy:clade>
+ <phy:branch_length>0.13244135467</phy:branch_length>
+ <phy:clade>
+ <phy:branch_length>0.0948748125211</phy:branch_length>
+ <phy:clade>
+ <phy:branch_length>0.0929433255405</phy:branch_length>
+ <phy:clade>
+ <phy:branch_length>0.330770239278</phy:branch_length>
+ <phy:clade>
+ <phy:branch_length>0.192381887473</phy:branch_length>
+ <phy:clade>
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+ <phy:clade>
+ <phy:branch_length>0.0855907238061</phy:branch_length>
+ <phy:clade>
+ <phy:name>t646564550</phy:name>
+ <phy:branch_length>0.45716726739</phy:branch_length>
+ </phy:clade>
+ <phy:clade>
+ <phy:name>t637000161</phy:name>
+ <phy:branch_length>0.368289139504</phy:branch_length>
+ </phy:clade>
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+ <phy:clade>
+ <phy:branch_length>0.329323314918</phy:branch_length>
+ <phy:clade>
+ <phy:branch_length>0.0669040671033</phy:branch_length>
+ <phy:clade>
+ <phy:name>t638154508</phy:name>
+ <phy:branch_length>0.110152589315</phy:branch_length>
+ </phy:clade>
+ <phy:clade>
+ <phy:name>t638154509</phy:name>
+ <phy:branch_length>0.13081136446</phy:branch_length>
+ </phy:clade>
+ </phy:clade>
+ <phy:clade>
+ <phy:name>t637000162</phy:name>
+ <phy:branch_length>0.132310841034</phy:branch_length>
+ </phy:clade>
+ </phy:clade>
+ </phy:clade>
+ <phy:clade>
+ <phy:branch_length>0.540156953215</phy:branch_length>
+ <phy:clade>
+ <phy:name>t650716054</phy:name>
+ <phy:branch_length>0.376287606523</phy:branch_length>
+ </phy:clade>
+ <phy:clade>
+ <phy:name>t639633038</phy:name>
+ <phy:branch_length>0.430693831859</phy:branch_length>
+ </phy:clade>
+ </phy:clade>
+ </phy:clade>
+ <phy:clade>
+ <phy:branch_length>0.600246152113</phy:branch_length>
+ <phy:clade>
+ <phy:name>t646311945</phy:name>
+ <phy:branch_length>0.325191115613</phy:branch_length>
+ </phy:clade>
+ <phy:clade>
+ <phy:name>t640427153</phy:name>
+ <phy:branch_length>0.361490577111</phy:branch_length>
+ </phy:clade>
+ </phy:clade>
+ </phy:clade>
+ <phy:clade>
+ <phy:branch_length>0.129672943852</phy:branch_length>
+ <phy:clade>
+ <phy:branch_length>1.34033580601</phy:branch_length>
+ <phy:clade>
+ <phy:branch_length>0.058755888433</phy:branch_length>
+ <phy:clade>
+ <phy:name>t649989953</phy:name>
+ <phy:branch_length>0.314206142897</phy:branch_length>
+ </phy:clade>
+ <phy:clade>
+ <phy:name>t648028029</phy:name>
+ <phy:branch_length>0.341980273444</phy:branch_length>
+ </phy:clade>
+ </phy:clade>
+ <phy:clade>
+ <phy:branch_length>0.0275298751717</phy:branch_length>
+ <phy:clade>
+ <phy:branch_length>0.0397977833456</phy:branch_length>
+ <phy:clade>
+ <phy:branch_length>0.233954019932</phy:branch_length>
+ <phy:clade>
+ <phy:name>t646564555</phy:name>
+ <phy:branch_length>0.172463584933</phy:branch_length>
+ </phy:clade>
+ <phy:clade>
+ <phy:name>t646311934</phy:name>
+ <phy:branch_length>0.180301394009</phy:branch_length>
+ </phy:clade>
+ </phy:clade>
+ <phy:clade>
+ <phy:branch_length>0.0393591258503</phy:branch_length>
+ <phy:clade>
+ <phy:branch_length>0.10788529912</phy:branch_length>
+ <phy:clade>
+ <phy:branch_length>0.106354745685</phy:branch_length>
+ <phy:clade>
+ <phy:name>t638154503</phy:name>
+ <phy:branch_length>0.227997878529</phy:branch_length>
+ </phy:clade>
+ <phy:clade>
+ <phy:name>t644736372</phy:name>
+ <phy:branch_length>0.239027600202</phy:branch_length>
+ </phy:clade>
+ </phy:clade>
+ <phy:clade>
+ <phy:branch_length>0.290224549077</phy:branch_length>
+ <phy:clade>
+ <phy:name>t651324042</phy:name>
+ <phy:branch_length>0.111819775783</phy:branch_length>
+ </phy:clade>
+ <phy:clade>
+ <phy:name>t644736373</phy:name>
+ <phy:branch_length>0.0951048600534</phy:branch_length>
+ </phy:clade>
+ </phy:clade>
+ </phy:clade>
+ <phy:clade>
+ <phy:branch_length>0.0897284986195</phy:branch_length>
+ <phy:clade>
+ <phy:name>t643692025</phy:name>
+ <phy:branch_length>0.36872522897</phy:branch_length>
+ </phy:clade>
+ <phy:clade>
+ <phy:branch_length>0.0802525258034</phy:branch_length>
+ <phy:clade>
+ <phy:branch_length>0.0857840639711</phy:branch_length>
+ <phy:clade>
+ <phy:name>t649633053</phy:name>
+ <phy:branch_length>0.196242620011</phy:branch_length>
+ </phy:clade>
+ <phy:clade>
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+ <phy:branch_length>0.283925364634</phy:branch_length>
+ </phy:clade>
+ </phy:clade>
+ <phy:clade>
+ <phy:branch_length>0.398135012406</phy:branch_length>
+ <phy:clade>
+ <phy:name>t637000129</phy:name>
+ <phy:branch_length>0.0065595872071</phy:branch_length>
+ </phy:clade>
+ <phy:clade>
+ <phy:name>t651053028</phy:name>
+ <phy:branch_length>0.00275964014716</phy:branch_length>
+ </phy:clade>
+ </phy:clade>
+ </phy:clade>
+ </phy:clade>
+ </phy:clade>
+ </phy:clade>
+ <phy:clade>
+ <phy:branch_length>0.068440834006</phy:branch_length>
+ <phy:clade>
+ <phy:name>t637000187</phy:name>
+ <phy:branch_length>0.360725849937</phy:branch_length>
+ </phy:clade>
+ <phy:clade>
+ <phy:branch_length>0.456970180104</phy:branch_length>
+ <phy:clade>
+ <phy:name>t638154504</phy:name>
+ <phy:branch_length>0.000968180538482</phy:branch_length>
+ </phy:clade>
+ <phy:clade>
+ <phy:name>t641522631</phy:name>
+ <phy:branch_length>0.00127612418251</phy:branch_length>
+ </phy:clade>
+ </phy:clade>
+ </phy:clade>
+ </phy:clade>
+ </phy:clade>
+ <phy:clade>
+ <phy:branch_length>0.47328857686</phy:branch_length>
+ <phy:clade>
+ <phy:name>t648028040</phy:name>
+ <phy:branch_length>0.562601777835</phy:branch_length>
+ </phy:clade>
+ <phy:clade>
+ <phy:branch_length>0.0640427258823</phy:branch_length>
+ <phy:clade>
+ <phy:branch_length>0.136064313713</phy:branch_length>
+ <phy:clade>
+ <phy:name>t640069318</phy:name>
+ <phy:branch_length>0.484489377983</phy:branch_length>
+ </phy:clade>
+ <phy:clade>
+ <phy:branch_length>0.10277637321</phy:branch_length>
+ <phy:clade>
+ <phy:name>t643348525</phy:name>
+ <phy:branch_length>0.482567509956</phy:branch_length>
+ </phy:clade>
+ <phy:clade>
+ <phy:name>t640753014</phy:name>
+ <phy:branch_length>0.469951213826</phy:branch_length>
+ </phy:clade>
+ </phy:clade>
+ </phy:clade>
+ <phy:clade>
+ <phy:branch_length>0.0927867072361</phy:branch_length>
+ <phy:clade>
+ <phy:name>t640069317</phy:name>
+ <phy:branch_length>0.86199260801</phy:branch_length>
+ </phy:clade>
+ <phy:clade>
+ <phy:name>t637000164</phy:name>
+ <phy:branch_length>0.660155092069</phy:branch_length>
+ </phy:clade>
+ </phy:clade>
+ </phy:clade>
+ </phy:clade>
+ </phy:clade>
+ </phy:clade>
+ </phy:clade>
+ </phy:clade>
+ </phy:clade>
+ </phy:clade>
+ </phy:phylogeny>
+</phy:phyloxml>
\ No newline at end of file
diff --git a/examples/PhyloPhlAn/run.sh b/examples/PhyloPhlAn/run.sh
new file mode 100755
index 0000000..accd804
--- /dev/null
+++ b/examples/PhyloPhlAn/run.sh
@@ -0,0 +1,3 @@
+#!/bin/sh
+graphlan_annotate.py ppa_tol.xml ppa_tol.annot.xml --annot annot.txt
+graphlan.py ppa_tol.annot.xml ppa_tol.png --dpi 200 --size 15 --pad 0.6
diff --git a/examples/archaea/annot.txt b/examples/archaea/annot.txt
new file mode 100644
index 0000000..e75b0e6
--- /dev/null
+++ b/examples/archaea/annot.txt
@@ -0,0 +1,747 @@
+title Archaea taxonomic tree
+title_font_size 25
+
+ring_internal_separator_thickness 1 1
+ring_internal_separator_thickness 2 1
+ring_internal_separator_thickness 3 1
+ring_internal_separator_thickness 4 1
+
+start_rotation 270
+total_plotted_degrees 360
+
+* ring_width 1 1.0
+* ring_width 4 0.7
+* branch_thickness 0.916126068736
+* annotation_background_separation 0.001
+* branch_color_from_ancestor 0
+* branch_bracket_depth 0.75
+* ring_edge_width 1 0.0
+* ring_edge_width 2 0.0
+* ring_edge_width 3 0.0
+
+annotation_font_size 7
+annotation_legend_font_size 10
+
+Euryarchaeota.Methanomicrobia.Methanosarcinales.Methanosarcinaceae.Methanosarcina.mazei.Go1 ring_height 4 1.92812559107
+Euryarchaeota.Methanococci.Methanococcales.Methanococcaceae.Methanothermococcus.okinawensis.IH1 ring_height 4 0.922640438812
+Crenarchaeota.Thermoprotei.Thermoproteales.Thermoproteaceae.Vulcanisaeta.moutnovskia.768_28 ring_height 4 1.31643654246
+Euryarchaeota.Methanomicrobia.Methanomicrobiales.Methanospirillaceae.Methanospirillum.hungatei.JF_1 ring_height 4 1.83790429355
+Euryarchaeota.Methanomicrobia.Methanosarcinales.Methanosarcinaceae.Methanosarcina.acetivorans.C2A ring_height 4 2.678834878
+Crenarchaeota.Thermoprotei.Sulfolobales.Sulfolobaceae.Sulfolobus.islandicus.L_S_2_15 ring_height 4 1.71363722338
+Euryarchaeota.Methanobacteria.Methanobacteriales.Methanobacteriaceae.Methanothermobacter.marburgensis.str__Marburg ring_height 4 0.996973709098
+Crenarchaeota.Thaumarchaeota.Nitrosopumilales.Nitrosopumilaceae.Nitrosopumilus.sp_.MY1 ring_height 4 1.1036504634
+Euryarchaeota.Thermoplasmata.Thermoplasmatales.Ferroplasmaceae.Ferroplasma.acidarmanus.Fer1 ring_height 4 0.96179307736
+Crenarchaeota.Thermoprotei.Sulfolobales.Sulfolobaceae.Metallosphaera.cuprina.Ar_4 ring_height 4 1.15131454511
+Crenarchaeota.Thermoprotei.Sulfolobales.Sulfolobaceae.Sulfolobus.islandicus.L_D_8_5 ring_height 4 1.6727822962
+Euryarchaeota.Methanococci.Methanococcales.Methanococcaceae.Methanococcus.vannielii.SB ring_height 4 0.965197654625
+Euryarchaeota.Methanobacteria.Methanobacteriales.Methanobacteriaceae.Methanosphaera.stadtmanae.DSM_3091 ring_height 4 0.871571779837
+Crenarchaeota.Thermoprotei.Thermoproteales.Thermofilaceae.Thermofilum.pendens.Hrk_5 ring_height 4 1.06846983166
+Euryarchaeota.Methanococci.Methanococcales.Methanocaldococcaceae.Methanocaldococcus.sp_.FS406_22 ring_height 4 1.04917722716
+Euryarchaeota.Halobacteria.Halobacteriales.Halobacteriaceae.Haloquadratum.walsbyi.DSM_16790 ring_height 4 1.62341592586
+Euryarchaeota.Methanomicrobia.Methanosarcinales.Methanosarcinaceae.Methanococcoides.burtonii.DSM_6242 ring_height 4 1.37942122186
+Crenarchaeota.Thermoprotei.Sulfolobales.Sulfolobaceae.Sulfolobus.tokodaii.str__7 ring_height 4 1.65405712124
+Euryarchaeota.Thermococci.Thermococcales.Thermococcaceae.Thermococcus.onnurineus.NA1 ring_height 4 1.12124077927
+Euryarchaeota.Methanobacteria.Methanobacteriales.Methanobacteriaceae.Methanothermobacter.thermautotrophicus.str__Delta_H ring_height 4 1.04690750898
+Crenarchaeota.Thaumarchaeota.Nitrosopumilales.Nitrosopumilaceae.Candidatus_Nitrosoarchaeum.Nitrosoarchaeum.limnia_SFB1 ring_height 4 1.15642141101
+Euryarchaeota.Archaeoglobi.Archaeoglobales.Archaeoglobaceae.Ferroglobus.placidus.DSM_10642 ring_height 4 1.45659163987
+Euryarchaeota.Methanobacteria.Methanobacteriales.Methanothermaceae.Methanothermus.fervidus.DSM_2088 ring_height 4 0.739360696047
+Euryarchaeota.Methanomicrobia.Methanosarcinales.Methanosaetaceae.Methanosaeta.concilii.GP6 ring_height 4 1.61717420087
+Euryarchaeota.Methanococci.Methanococcales.Methanococcaceae.Methanococcus.voltae.A3 ring_height 4 0.976546245508
+Euryarchaeota.Halobacteria.Halobacteriales.Halobacteriaceae.Haloferax.volcanii.DS2 ring_height 4 2.27822961982
+Crenarchaeota.Thermoprotei.Sulfolobales.Sulfolobaceae.Sulfolobus.islandicus.M_16_4 ring_height 4 1.60015131455
+Crenarchaeota.Thermoprotei.Desulfurococcales.Desulfurococcaceae.Ignicoccus.hospitalis.KIN4_I ring_height 4 0.819368261774
+Crenarchaeota.Thermoprotei.Desulfurococcales.Desulfurococcaceae.Desulfurococcus.mucosus.DSM_2162 ring_height 4 0.77794590505
+Euryarchaeota.Methanomicrobia.Methanosarcinales.Methanosarcinaceae.Methanohalobium.evestigatum.Z_7303 ring_height 4 1.34934745602
+Crenarchaeota.Thermoprotei.Thermoproteales.Thermoproteaceae.Pyrobaculum.arsenaticum.DSM_13514 ring_height 4 1.34083601286
+Crenarchaeota.Thermoprotei.Sulfolobales.Sulfolobaceae.Acidianus.hospitalis.W1 ring_height 4 1.32154340836
+Crenarchaeota.Thermoprotei.Acidilobales.Acidilobaceae.Acidilobus.saccharovorans.345_15 ring_height 4 0.850576886703
+Euryarchaeota.Halobacteria.Halobacteriales.Halobacteriaceae.Halomicrobium.mukohataei.DSM_12286 ring_height 4 1.93777189332
+Euryarchaeota.Methanococci.Methanococcales.Methanocaldococcaceae.Methanocaldococcus.fervens.AG86 ring_height 4 0.919235861547
+Euryarchaeota.Methanomicrobia.Methanocellales.Methanocellaceae.Methanocella.paludicola.SANAE ring_height 4 1.70455835067
+Euryarchaeota.Thermoplasmata.Thermoplasmatales.Thermoplasmataceae.Thermoplasma.volcanium.GSS1 ring_height 4 0.885757518441
+Euryarchaeota.Methanobacteria.Methanobacteriales.Methanobacteriaceae.Methanobrevibacter.ruminantium.M1 ring_height 4 1.25799129941
+Euryarchaeota.Methanomicrobia.Methanosarcinales.Methanosarcinaceae.Methanohalophilus.mahii.DSM_5219 ring_height 4 1.15301683374
+Euryarchaeota.Archaeoglobi.Archaeoglobales.Archaeoglobaceae.Archaeoglobus.profundus.DSM_5631 ring_height 4 1.05428409306
+Euryarchaeota.Thermococci.Thermococcales.Thermococcaceae.Thermococcus.kodakaraensis.KOD1 ring_height 4 1.30338566295
+Euryarchaeota.Methanopyri.Methanopyrales.Methanopyraceae.Methanopyrus.kandleri.AV19 ring_height 4 0.979950822773
+Euryarchaeota.Archaeoglobi.Archaeoglobales.Archaeoglobaceae.Archaeoglobus.fulgidus.DSM_4304 ring_height 4 1.400416115
+Euryarchaeota.Methanococci.Methanococcales.Methanocaldococcaceae.Methanocaldococcus.infernus.ME ring_height 4 0.83241914129
+Euryarchaeota.Thermoplasmata.Thermoplasmatales.Aciduloprofundaceae.Aciduliprofundum.boonei.T469 ring_height 4 1.67334972574
+Euryarchaeota.Methanobacteria.Methanobacteriales.Methanobacteriaceae.Methanobrevibacter.smithii.DSM_2374 ring_height 4 0.970304520522
+Euryarchaeota.Methanobacteria.Methanobacteriales.Methanobacteriaceae.Methanobrevibacter.smithii.DSM_2375 ring_height 4 0.969737090978
+Euryarchaeota.Halobacteria.Halobacteriales.Halobacteriaceae.Haladaptatus.paucihalophilus.DX253 ring_height 4 2.52108946472
+Euryarchaeota.Methanococci.Methanococcales.Methanocaldococcaceae.Methanocaldococcus.vulcanius.M7 ring_height 4 1.00151314545
+Euryarchaeota.Halobacteria.Halobacteriales.Halobacteriaceae.Halorhabdus.tiamatea.SARL4B ring_height 4 2.25836958578
+Crenarchaeota.Thermoprotei.Sulfolobales.Sulfolobaceae.Sulfolobus.islandicus.Y_N_15_51 ring_height 4 1.85549460942
+Crenarchaeota.Thermoprotei.Desulfurococcales.Desulfurococcaceae.Aeropyrum.pernix.K1 ring_height 4 1.56780783053
+Crenarchaeota.Thermoprotei.Thermoproteales.Thermoproteaceae.Vulcanisaeta.distributa.DSM_14429 ring_height 4 1.44297333081
+Crenarchaeota.Thermoprotei.Sulfolobales.Sulfolobaceae.Sulfolobus.solfataricus.98_2 ring_height 4 1.76073387554
+Crenarchaeota.Thermoprotei.Thermoproteales.Thermoproteaceae.Pyrobaculum.islandicum.DSM_4184 ring_height 4 1.14280310195
+Crenarchaeota.Thermoprotei.Sulfolobales.Sulfolobaceae.Sulfolobus.islandicus.M_14_25 ring_height 4 1.6188764895
+Crenarchaeota.Thermoprotei.Desulfurococcales.Desulfurococcaceae.Staphylothermus.marinus.F1 ring_height 4 0.913561566106
+Euryarchaeota.Thermococci.Thermococcales.Thermococcaceae.Pyrococcus.furiosus.DSM_3638 ring_height 4 1.17401172688
+Nanoarchaeota.Nanoarchaea.Nanoarchales.Nanoarchaceae.Nanoarchaeum.equitans.Kin4_M ring_height 4 0.315490826556
+Euryarchaeota.Methanomicrobia.Methanosarcinales.Methanosaetaceae.Methanosaeta.thermophila.PT ring_height 4 0.981653111405
+Euryarchaeota.Thermoplasmata.Thermoplasmatales.Picrophilaceae.Picrophilus.torridus.DSM_9790 ring_height 4 0.880083223
+Euryarchaeota.Halobacteria.Halobacteriales.Halobacteriaceae.Halorubrum.lacusprofundi.ATCC_49239 ring_height 4 2.07962927936
+Crenarchaeota.Thermoprotei.Thermoproteales.Thermoproteaceae.Thermoproteus.uzoniensis.768_20 ring_height 4 1.24040098354
+Crenarchaeota.Thermoprotei.Sulfolobales.Sulfolobaceae.Sulfolobus.acidocaldarius.DSM_639 ring_height 4 1.29657650842
+Euryarchaeota.Halobacteria.Halobacteriales.Halobacteriaceae.Haloquadratum.walsbyi.C23 ring_height 4 1.69547947796
+Crenarchaeota.Thermoprotei.Sulfolobales.Sulfolobaceae.Sulfolobus.solfataricus.P2 ring_height 4 1.72952525061
+Crenarchaeota.Thermoprotei.Desulfurococcales.Desulfurococcaceae.Desulfurococcus.kamchatkensis.1221n ring_height 4 0.834688859467
+Euryarchaeota.Halobacteria.Halobacteriales.Halobacteriaceae.Halobacterium.sp_.NRC_1 ring_height 4 1.51787403064
+Crenarchaeota.Thermoprotei.Sulfolobales.Sulfolobaceae.Sulfolobus.islandicus.Y_G_57_14 ring_height 4 1.71987894836
+Crenarchaeota.Thermoprotei.Thermoproteales.Thermoproteaceae.Pyrobaculum.calidifontis.JCM_11548 ring_height 4 1.23926612446
+Euryarchaeota.Halobacteria.Halobacteriales.Halobacteriaceae.Natrialba.magadii.ATCC_43099 ring_height 4 2.44221675809
+Euryarchaeota.Halobacteria.Halobacteriales.Halobacteriaceae.Haloterrigena.turkmenica.DSM_5511 ring_height 4 3.0
+Euryarchaeota.Methanococci.Methanococcales.Methanococcaceae.Methanococcus.aeolicus.Nankai_3 ring_height 4 0.85284660488
+Euryarchaeota.Thermococci.Thermococcales.Thermococcaceae.Thermococcus.sp_.4557 ring_height 4 1.2103272177
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+Crenarchaeota.Thaumarchaeota.Nitrosopumilales.Nitrosopumilaceae.Nitrosopumilus.maritimus.SCM1 ring_height 4 1.01967089086
+Euryarchaeota.Methanococci.Methanococcales.Methanocaldococcaceae.Methanocaldococcus.jannaschii.DSM_2661 ring_height 4 1.01513145451
+Euryarchaeota.Methanomicrobia.Methanomicrobiales.Methanomicrobiaceae.Methanoplanus.petrolearius.DSM_11571 ring_height 4 1.60242103272
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+Euryarchaeota.Thermococci.Thermococcales.Thermococcaceae.Pyrococcus.horikoshii.OT3 ring_height 4 1.24607527899
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+Euryarchaeota.Halobacteria.Halobacteriales.Halobacteriaceae.Natronomonas.pharaonis.DSM_2160 ring_height 4 1.61320219406
+Crenarchaeota.Thermoprotei.Desulfurococcales.Desulfurococcaceae.Thermosphaera.aggregans.DSM_11486 ring_height 4 0.800075657273
+Euryarchaeota.Thermococci.Thermococcales.Thermococcaceae.Pyrococcus.abyssi.GE5 ring_height 4 1.08038585209
+Crenarchaeota.Thermoprotei.Desulfurococcales.Desulfurococcaceae.Ignisphaera.aggregans.DSM_17230 ring_height 4 1.13031965198
+Crenarchaeota.Thermoprotei.Sulfolobales.Sulfolobaceae.Metallosphaera.sedula.DSM_5348 ring_height 4 1.30111594477
+Euryarchaeota.Methanococci.Methanococcales.Methanocaldococcaceae.Methanotorris.igneus.Kol_5 ring_height 4 1.02194060904
+Crenarchaeota.Thermoprotei.Sulfolobales.Sulfolobaceae.Sulfolobus.islandicus.HVE10_4 ring_height 4 1.54511064876
+Euryarchaeota.Methanococci.Methanococcales.Methanococcaceae.Methanococcus.maripaludis.S2 ring_height 4 0.980518252317
+Euryarchaeota.Thermoplasmata.Thermoplasmatales.Thermoplasmataceae.Thermoplasma.acidophilum.DSM_1728 ring_height 4 0.86646491394
+Euryarchaeota.Thermococci.Thermococcales.Thermococcaceae.Thermococcus.sibiricus.MM_739 ring_height 4 1.15471912238
+Crenarchaeota.Thermoprotei.Sulfolobales.Sulfolobaceae.Sulfolobus.islandicus.M_16_27 ring_height 4 1.65065254398
+Crenarchaeota.Thermoprotei.Thermoproteales.Thermoproteaceae.Pyrobaculum.aerophilum.str__IM2 ring_height 4 1.46113107622
+Crenarchaeota.Thermoprotei.Thermoproteales.Thermoproteaceae.Caldivirga.maquilingensis.IC_167 ring_height 4 1.1138641952
+Euryarchaeota.Thermococci.Thermococcales.Thermococcaceae.Thermococcus.barophilus.MP ring_height 4 1.28522791753
+Euryarchaeota.Methanobacteria.Methanobacteriales.Methanobacteriaceae.Methanobrevibacter.smithii.ATCC_35061 ring_height 4 1.01853603178
+Euryarchaeota.Halobacteria.Halobacteriales.Halobacteriaceae.Halalkalicoccus.jeotgali.B3 ring_height 4 2.19765462455
+Euryarchaeota.Thermococci.Thermococcales.Thermococcaceae.Pyrococcus.yayanosii.CH1 ring_height 4 1.05825609987
+Euryarchaeota.Methanococci.Methanococcales.Methanococcaceae.Methanococcus.maripaludis.C5 ring_height 4 1.04690750898
+Euryarchaeota.Methanococci.Methanococcales.Methanococcaceae.Methanococcus.maripaludis.C7 ring_height 4 1.02534518631
+Euryarchaeota.Methanococci.Methanococcales.Methanococcaceae.Methanococcus.maripaludis.C6 ring_height 4 1.03612634765
+Crenarchaeota.Thaumarchaeota.Cenarchaeales.Cenarchaeaceae.Cenarchaeum.symbiosum.A ring_height 4 1.14450539058
+Euryarchaeota.Thermococci.Thermococcales.Thermococcaceae.Thermococcus.gammatolerans.EJ3 ring_height 4 1.22337809722
+Euryarchaeota.Methanobacteria.Methanobacteriales.Methanobacteriaceae.Methanobacterium.sp_.SWAN_1 ring_height 4 1.38566294685
+Euryarchaeota.Thermococci.Thermococcales.Thermococcaceae.Thermococcus.sp_.AM4 ring_height 4 1.23018725175
+Crenarchaeota.Thermoprotei.Sulfolobales.Sulfolobaceae.Sulfolobus.islandicus.REY15A ring_height 4 1.50028371477
+Euryarchaeota.Halobacteria.Halobacteriales.Halobacteriaceae.Halorhabdus.utahensis.DSM_12940 ring_height 4 1.71760923019
+Crenarchaeota.Thermoprotei.Desulfurococcales.Pyrodictiaceae.Hyperthermus.butylicus.DSM_5456 ring_height 4 0.916966143371
+Euryarchaeota.Methanomicrobia.Methanomicrobiales.Methanocullaceae.Methanoculleus.marisnigri.JR1 ring_height 4 1.42197843768
+Euryarchaeota.Methanobacteria.Methanobacteriales.Methanobacteriaceae.Methanobacterium.sp_.AL_21 ring_height 4 1.43729903537
+Euryarchaeota.Halobacteria.Halobacteriales.Halobacteriaceae.Halogeometricum.borinquense.DSM_11551 ring_height 4 2.23340268583
+Euryarchaeota.Methanomicrobia.Methanosarcinales.Methanosarcinaceae.Methanosarcina.barkeri.str__fusaro ring_height 4 2.13240022697
+Euryarchaeota.Methanomicrobia.Methanomicrobiales.Methanoregulaceae.Methanoregula.boonei.boonei_6A8 ring_height 4 1.39814639682
+Crenarchaeota.Thermoprotei.Thermoproteales.Thermoproteaceae.Thermoproteus.neutrophilus.V24Sta ring_height 4 1.13826366559
+Euryarchaeota.Methanomicrobia.Methanocellales.Methanocellaceae.Methanocella.sp_.archaeon_RC_I ring_height 4 1.75052014375
+Euryarchaeota.Halobacteria.Halobacteriales.Haloarculaceae.Haloarcula.marismortui.ATCC_43049 ring_height 4 2.45413277851
+Crenarchaeota.Thaumarchaeota.Nitrosopumilales.Nitrosopumilaceae.Nitrosopumilus.sp_.MY1 ring_color 4 #DDD000
+Euryarchaeota.Thermoplasmata.Thermoplasmatales.Ferroplasmaceae.Ferroplasma.acidarmanus.Fer1 ring_color 4 #DDD000
+Crenarchaeota.Thaumarchaeota.Nitrosopumilales.Nitrosopumilaceae.Candidatus_Nitrosoarchaeum.Nitrosoarchaeum.limnia_SFB1 ring_color 4 #DDD000
+Euryarchaeota.Thermoplasmata.Thermoplasmatales.Aciduloprofundaceae.Aciduliprofundum.boonei.T469 ring_color 4 #DDD000
+Euryarchaeota.Methanobacteria.Methanobacteriales.Methanobacteriaceae.Methanobrevibacter.smithii.DSM_2374 ring_color 4 #DDD000
+Euryarchaeota.Methanobacteria.Methanobacteriales.Methanobacteriaceae.Methanobrevibacter.smithii.DSM_2375 ring_color 4 #DDD000
+Euryarchaeota.Halobacteria.Halobacteriales.Halobacteriaceae.Haladaptatus.paucihalophilus.DX253 ring_color 4 #DDD000
+Euryarchaeota.Halobacteria.Halobacteriales.Halobacteriaceae.Halorhabdus.tiamatea.SARL4B ring_color 4 #DDD000
+Crenarchaeota.Thermoprotei.Sulfolobales.Sulfolobaceae.Sulfolobus.solfataricus.98_2 ring_color 4 #DDD000
+Euryarchaeota.Thermococci.Thermococcales.Thermococcaceae.Thermococcus.sp_.AM4 ring_color 4 #DDD000
+Euryarchaeota.Methanomicrobia.Methanosarcinales.Methanosarcinaceae.Methanosarcina.mazei.Go1 ring_color 4 #00AA00
+Euryarchaeota.Methanococci.Methanococcales.Methanococcaceae.Methanothermococcus.okinawensis.IH1 ring_color 4 #00AA00
+Crenarchaeota.Thermoprotei.Thermoproteales.Thermoproteaceae.Vulcanisaeta.moutnovskia.768_28 ring_color 4 #00AA00
+Euryarchaeota.Methanomicrobia.Methanomicrobiales.Methanospirillaceae.Methanospirillum.hungatei.JF_1 ring_color 4 #00AA00
+Euryarchaeota.Methanomicrobia.Methanosarcinales.Methanosarcinaceae.Methanosarcina.acetivorans.C2A ring_color 4 #00AA00
+Crenarchaeota.Thermoprotei.Sulfolobales.Sulfolobaceae.Sulfolobus.islandicus.L_S_2_15 ring_color 4 #00AA00
+Euryarchaeota.Methanobacteria.Methanobacteriales.Methanobacteriaceae.Methanothermobacter.marburgensis.str__Marburg ring_color 4 #00AA00
+Crenarchaeota.Thermoprotei.Sulfolobales.Sulfolobaceae.Metallosphaera.cuprina.Ar_4 ring_color 4 #00AA00
+Crenarchaeota.Thermoprotei.Sulfolobales.Sulfolobaceae.Sulfolobus.islandicus.L_D_8_5 ring_color 4 #00AA00
+Euryarchaeota.Methanococci.Methanococcales.Methanococcaceae.Methanococcus.vannielii.SB ring_color 4 #00AA00
+Euryarchaeota.Methanobacteria.Methanobacteriales.Methanobacteriaceae.Methanosphaera.stadtmanae.DSM_3091 ring_color 4 #00AA00
+Crenarchaeota.Thermoprotei.Thermoproteales.Thermofilaceae.Thermofilum.pendens.Hrk_5 ring_color 4 #00AA00
+Euryarchaeota.Methanococci.Methanococcales.Methanocaldococcaceae.Methanocaldococcus.sp_.FS406_22 ring_color 4 #00AA00
+Euryarchaeota.Halobacteria.Halobacteriales.Halobacteriaceae.Haloquadratum.walsbyi.DSM_16790 ring_color 4 #00AA00
+Euryarchaeota.Methanomicrobia.Methanosarcinales.Methanosarcinaceae.Methanococcoides.burtonii.DSM_6242 ring_color 4 #00AA00
+Crenarchaeota.Thermoprotei.Sulfolobales.Sulfolobaceae.Sulfolobus.tokodaii.str__7 ring_color 4 #00AA00
+Euryarchaeota.Thermococci.Thermococcales.Thermococcaceae.Thermococcus.onnurineus.NA1 ring_color 4 #00AA00
+Euryarchaeota.Methanobacteria.Methanobacteriales.Methanobacteriaceae.Methanothermobacter.thermautotrophicus.str__Delta_H ring_color 4 #00AA00
+Euryarchaeota.Archaeoglobi.Archaeoglobales.Archaeoglobaceae.Ferroglobus.placidus.DSM_10642 ring_color 4 #00AA00
+Euryarchaeota.Methanobacteria.Methanobacteriales.Methanothermaceae.Methanothermus.fervidus.DSM_2088 ring_color 4 #00AA00
+Euryarchaeota.Methanomicrobia.Methanosarcinales.Methanosaetaceae.Methanosaeta.concilii.GP6 ring_color 4 #00AA00
+Euryarchaeota.Methanococci.Methanococcales.Methanococcaceae.Methanococcus.voltae.A3 ring_color 4 #00AA00
+Euryarchaeota.Halobacteria.Halobacteriales.Halobacteriaceae.Haloferax.volcanii.DS2 ring_color 4 #00AA00
+Crenarchaeota.Thermoprotei.Sulfolobales.Sulfolobaceae.Sulfolobus.islandicus.M_16_4 ring_color 4 #00AA00
+Crenarchaeota.Thermoprotei.Desulfurococcales.Desulfurococcaceae.Ignicoccus.hospitalis.KIN4_I ring_color 4 #00AA00
+Crenarchaeota.Thermoprotei.Desulfurococcales.Desulfurococcaceae.Desulfurococcus.mucosus.DSM_2162 ring_color 4 #00AA00
+Euryarchaeota.Methanomicrobia.Methanosarcinales.Methanosarcinaceae.Methanohalobium.evestigatum.Z_7303 ring_color 4 #00AA00
+Crenarchaeota.Thermoprotei.Thermoproteales.Thermoproteaceae.Pyrobaculum.arsenaticum.DSM_13514 ring_color 4 #00AA00
+Crenarchaeota.Thermoprotei.Sulfolobales.Sulfolobaceae.Acidianus.hospitalis.W1 ring_color 4 #00AA00
+Crenarchaeota.Thermoprotei.Acidilobales.Acidilobaceae.Acidilobus.saccharovorans.345_15 ring_color 4 #00AA00
+Euryarchaeota.Halobacteria.Halobacteriales.Halobacteriaceae.Halomicrobium.mukohataei.DSM_12286 ring_color 4 #00AA00
+Euryarchaeota.Methanococci.Methanococcales.Methanocaldococcaceae.Methanocaldococcus.fervens.AG86 ring_color 4 #00AA00
+Euryarchaeota.Methanomicrobia.Methanocellales.Methanocellaceae.Methanocella.paludicola.SANAE ring_color 4 #00AA00
+Euryarchaeota.Thermoplasmata.Thermoplasmatales.Thermoplasmataceae.Thermoplasma.volcanium.GSS1 ring_color 4 #00AA00
+Euryarchaeota.Methanobacteria.Methanobacteriales.Methanobacteriaceae.Methanobrevibacter.ruminantium.M1 ring_color 4 #00AA00
+Euryarchaeota.Methanomicrobia.Methanosarcinales.Methanosarcinaceae.Methanohalophilus.mahii.DSM_5219 ring_color 4 #00AA00
+Euryarchaeota.Archaeoglobi.Archaeoglobales.Archaeoglobaceae.Archaeoglobus.profundus.DSM_5631 ring_color 4 #00AA00
+Euryarchaeota.Thermococci.Thermococcales.Thermococcaceae.Thermococcus.kodakaraensis.KOD1 ring_color 4 #00AA00
+Euryarchaeota.Methanopyri.Methanopyrales.Methanopyraceae.Methanopyrus.kandleri.AV19 ring_color 4 #00AA00
+Euryarchaeota.Archaeoglobi.Archaeoglobales.Archaeoglobaceae.Archaeoglobus.fulgidus.DSM_4304 ring_color 4 #00AA00
+Euryarchaeota.Methanococci.Methanococcales.Methanocaldococcaceae.Methanocaldococcus.infernus.ME ring_color 4 #00AA00
+Euryarchaeota.Methanococci.Methanococcales.Methanocaldococcaceae.Methanocaldococcus.vulcanius.M7 ring_color 4 #00AA00
+Crenarchaeota.Thermoprotei.Sulfolobales.Sulfolobaceae.Sulfolobus.islandicus.Y_N_15_51 ring_color 4 #00AA00
+Crenarchaeota.Thermoprotei.Desulfurococcales.Desulfurococcaceae.Aeropyrum.pernix.K1 ring_color 4 #00AA00
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+Crenarchaeota.Thermoprotei.Thermoproteales.Thermoproteaceae.Pyrobaculum.islandicum.DSM_4184 ring_color 4 #00AA00
+Crenarchaeota.Thermoprotei.Sulfolobales.Sulfolobaceae.Sulfolobus.islandicus.M_14_25 ring_color 4 #00AA00
+Crenarchaeota.Thermoprotei.Desulfurococcales.Desulfurococcaceae.Staphylothermus.marinus.F1 ring_color 4 #00AA00
+Euryarchaeota.Thermococci.Thermococcales.Thermococcaceae.Pyrococcus.furiosus.DSM_3638 ring_color 4 #00AA00
+Nanoarchaeota.Nanoarchaea.Nanoarchales.Nanoarchaceae.Nanoarchaeum.equitans.Kin4_M ring_color 4 #00AA00
+Euryarchaeota.Methanomicrobia.Methanosarcinales.Methanosaetaceae.Methanosaeta.thermophila.PT ring_color 4 #00AA00
+Euryarchaeota.Thermoplasmata.Thermoplasmatales.Picrophilaceae.Picrophilus.torridus.DSM_9790 ring_color 4 #00AA00
+Euryarchaeota.Halobacteria.Halobacteriales.Halobacteriaceae.Halorubrum.lacusprofundi.ATCC_49239 ring_color 4 #00AA00
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+Crenarchaeota.Thermoprotei.Sulfolobales.Sulfolobaceae.Sulfolobus.acidocaldarius.DSM_639 ring_color 4 #00AA00
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+Crenarchaeota.Thermoprotei.Desulfurococcales.Desulfurococcaceae.Desulfurococcus.kamchatkensis.1221n ring_color 4 #00AA00
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+Crenarchaeota.Thermoprotei.Sulfolobales.Sulfolobaceae.Sulfolobus.islandicus.Y_G_57_14 ring_color 4 #00AA00
+Crenarchaeota.Thermoprotei.Thermoproteales.Thermoproteaceae.Pyrobaculum.calidifontis.JCM_11548 ring_color 4 #00AA00
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+Euryarchaeota.Halobacteria.Halobacteriales.Halobacteriaceae.Haloterrigena.turkmenica.DSM_5511 ring_color 4 #00AA00
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+Crenarchaeota.Thermoprotei.Sulfolobales.Sulfolobaceae.Metallosphaera.sedula.DSM_5348 ring_color 4 #00AA00
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+Crenarchaeota.Thermoprotei.Sulfolobales.Sulfolobaceae.Sulfolobus.islandicus.HVE10_4 ring_color 4 #00AA00
+Euryarchaeota.Methanococci.Methanococcales.Methanococcaceae.Methanococcus.maripaludis.S2 ring_color 4 #00AA00
+Euryarchaeota.Thermoplasmata.Thermoplasmatales.Thermoplasmataceae.Thermoplasma.acidophilum.DSM_1728 ring_color 4 #00AA00
+Euryarchaeota.Thermococci.Thermococcales.Thermococcaceae.Thermococcus.sibiricus.MM_739 ring_color 4 #00AA00
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+Euryarchaeota.Thermococci.Thermococcales.Thermococcaceae.Thermococcus.barophilus.MP ring_color 4 #00AA00
+Euryarchaeota.Methanobacteria.Methanobacteriales.Methanobacteriaceae.Methanobrevibacter.smithii.ATCC_35061 ring_color 4 #00AA00
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+Euryarchaeota.Methanococci.Methanococcales.Methanococcaceae.Methanococcus.maripaludis.C7 ring_color 4 #00AA00
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+Euryarchaeota.Thermococci.Thermococcales.Thermococcaceae.Thermococcus.gammatolerans.EJ3 ring_color 4 #00AA00
+Euryarchaeota.Methanobacteria.Methanobacteriales.Methanobacteriaceae.Methanobacterium.sp_.SWAN_1 ring_color 4 #00AA00
+Crenarchaeota.Thermoprotei.Sulfolobales.Sulfolobaceae.Sulfolobus.islandicus.REY15A ring_color 4 #00AA00
+Euryarchaeota.Halobacteria.Halobacteriales.Halobacteriaceae.Halorhabdus.utahensis.DSM_12940 ring_color 4 #00AA00
+Crenarchaeota.Thermoprotei.Desulfurococcales.Pyrodictiaceae.Hyperthermus.butylicus.DSM_5456 ring_color 4 #00AA00
+Euryarchaeota.Methanomicrobia.Methanomicrobiales.Methanocullaceae.Methanoculleus.marisnigri.JR1 ring_color 4 #00AA00
+Euryarchaeota.Methanobacteria.Methanobacteriales.Methanobacteriaceae.Methanobacterium.sp_.AL_21 ring_color 4 #00AA00
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+Euryarchaeota.Halobacteria.Halobacteriales.Haloarculaceae.Haloarcula.marismortui.ATCC_43049 ring_color 4 #00AA00
+Euryarchaeota.Methanomicrobia.Methanosarcinales.Methanosarcinaceae.Methanosarcina.mazei.Go1 ring_alpha 1 1.0
+Euryarchaeota.Methanococci.Methanococcales.Methanococcaceae.Methanothermococcus.okinawensis.IH1 ring_alpha 1 0.857142857143
+Crenarchaeota.Thermoprotei.Thermoproteales.Thermoproteaceae.Vulcanisaeta.moutnovskia.768_28 ring_alpha 1 0.428571428571
+Euryarchaeota.Methanomicrobia.Methanomicrobiales.Methanospirillaceae.Methanospirillum.hungatei.JF_1 ring_alpha 1 1.0
+Euryarchaeota.Methanomicrobia.Methanosarcinales.Methanosarcinaceae.Methanosarcina.acetivorans.C2A ring_alpha 1 1.0
+Crenarchaeota.Thermoprotei.Sulfolobales.Sulfolobaceae.Sulfolobus.islandicus.L_S_2_15 ring_alpha 1 0.428571428571
+Euryarchaeota.Methanobacteria.Methanobacteriales.Methanobacteriaceae.Methanothermobacter.marburgensis.str__Marburg ring_alpha 1 0.857142857143
+Crenarchaeota.Thaumarchaeota.Nitrosopumilales.Nitrosopumilaceae.Nitrosopumilus.sp_.MY1 ring_alpha 1 0.428571428571
+Euryarchaeota.Thermoplasmata.Thermoplasmatales.Ferroplasmaceae.Ferroplasma.acidarmanus.Fer1 ring_alpha 1 0.428571428571
+Crenarchaeota.Thermoprotei.Sulfolobales.Sulfolobaceae.Metallosphaera.cuprina.Ar_4 ring_alpha 1 0.428571428571
+Crenarchaeota.Thermoprotei.Sulfolobales.Sulfolobaceae.Sulfolobus.islandicus.L_D_8_5 ring_alpha 1 0.428571428571
+Euryarchaeota.Methanococci.Methanococcales.Methanococcaceae.Methanococcus.vannielii.SB ring_alpha 1 1.0
+Euryarchaeota.Methanobacteria.Methanobacteriales.Methanobacteriaceae.Methanosphaera.stadtmanae.DSM_3091 ring_alpha 1 1.0
+Crenarchaeota.Thermoprotei.Thermoproteales.Thermofilaceae.Thermofilum.pendens.Hrk_5 ring_alpha 1 0.428571428571
+Euryarchaeota.Methanococci.Methanococcales.Methanocaldococcaceae.Methanocaldococcus.sp_.FS406_22 ring_alpha 1 0.857142857143
+Euryarchaeota.Halobacteria.Halobacteriales.Halobacteriaceae.Haloquadratum.walsbyi.DSM_16790 ring_alpha 1 0.857142857143
+Euryarchaeota.Methanomicrobia.Methanosarcinales.Methanosarcinaceae.Methanococcoides.burtonii.DSM_6242 ring_alpha 1 1.0
+Crenarchaeota.Thermoprotei.Sulfolobales.Sulfolobaceae.Sulfolobus.tokodaii.str__7 ring_alpha 1 0.428571428571
+Euryarchaeota.Thermococci.Thermococcales.Thermococcaceae.Thermococcus.onnurineus.NA1 ring_alpha 1 0.428571428571
+Euryarchaeota.Methanobacteria.Methanobacteriales.Methanobacteriaceae.Methanothermobacter.thermautotrophicus.str__Delta_H ring_alpha 1 0.857142857143
+Crenarchaeota.Thaumarchaeota.Nitrosopumilales.Nitrosopumilaceae.Candidatus_Nitrosoarchaeum.Nitrosoarchaeum.limnia_SFB1 ring_alpha 1 0.428571428571
+Euryarchaeota.Archaeoglobi.Archaeoglobales.Archaeoglobaceae.Ferroglobus.placidus.DSM_10642 ring_alpha 1 0.428571428571
+Euryarchaeota.Methanobacteria.Methanobacteriales.Methanothermaceae.Methanothermus.fervidus.DSM_2088 ring_alpha 1 0.857142857143
+Euryarchaeota.Methanomicrobia.Methanosarcinales.Methanosaetaceae.Methanosaeta.concilii.GP6 ring_alpha 1 0.857142857143
+Euryarchaeota.Methanococci.Methanococcales.Methanococcaceae.Methanococcus.voltae.A3 ring_alpha 1 0.857142857143
+Euryarchaeota.Halobacteria.Halobacteriales.Halobacteriaceae.Haloferax.volcanii.DS2 ring_alpha 1 0.857142857143
+Crenarchaeota.Thermoprotei.Sulfolobales.Sulfolobaceae.Sulfolobus.islandicus.M_16_4 ring_alpha 1 0.428571428571
+Crenarchaeota.Thermoprotei.Desulfurococcales.Desulfurococcaceae.Ignicoccus.hospitalis.KIN4_I ring_alpha 1 0.428571428571
+Crenarchaeota.Thermoprotei.Desulfurococcales.Desulfurococcaceae.Desulfurococcus.mucosus.DSM_2162 ring_alpha 1 0.428571428571
+Euryarchaeota.Methanomicrobia.Methanosarcinales.Methanosarcinaceae.Methanohalobium.evestigatum.Z_7303 ring_alpha 1 0.857142857143
+Crenarchaeota.Thermoprotei.Thermoproteales.Thermoproteaceae.Pyrobaculum.arsenaticum.DSM_13514 ring_alpha 1 0.428571428571
+Crenarchaeota.Thermoprotei.Sulfolobales.Sulfolobaceae.Acidianus.hospitalis.W1 ring_alpha 1 0.428571428571
+Crenarchaeota.Thermoprotei.Acidilobales.Acidilobaceae.Acidilobus.saccharovorans.345_15 ring_alpha 1 0.428571428571
+Euryarchaeota.Halobacteria.Halobacteriales.Halobacteriaceae.Halomicrobium.mukohataei.DSM_12286 ring_alpha 1 1.0
+Euryarchaeota.Methanococci.Methanococcales.Methanocaldococcaceae.Methanocaldococcus.fervens.AG86 ring_alpha 1 0.857142857143
+Euryarchaeota.Methanomicrobia.Methanocellales.Methanocellaceae.Methanocella.paludicola.SANAE ring_alpha 1 0.857142857143
+Euryarchaeota.Thermoplasmata.Thermoplasmatales.Thermoplasmataceae.Thermoplasma.volcanium.GSS1 ring_alpha 1 0.428571428571
+Euryarchaeota.Methanobacteria.Methanobacteriales.Methanobacteriaceae.Methanobrevibacter.ruminantium.M1 ring_alpha 1 0.857142857143
+Euryarchaeota.Methanomicrobia.Methanosarcinales.Methanosarcinaceae.Methanohalophilus.mahii.DSM_5219 ring_alpha 1 1.0
+Euryarchaeota.Archaeoglobi.Archaeoglobales.Archaeoglobaceae.Archaeoglobus.profundus.DSM_5631 ring_alpha 1 0.428571428571
+Euryarchaeota.Thermococci.Thermococcales.Thermococcaceae.Thermococcus.kodakaraensis.KOD1 ring_alpha 1 0.428571428571
+Euryarchaeota.Methanopyri.Methanopyrales.Methanopyraceae.Methanopyrus.kandleri.AV19 ring_alpha 1 0.428571428571
+Euryarchaeota.Archaeoglobi.Archaeoglobales.Archaeoglobaceae.Archaeoglobus.fulgidus.DSM_4304 ring_alpha 1 0.428571428571
+Euryarchaeota.Methanococci.Methanococcales.Methanocaldococcaceae.Methanocaldococcus.infernus.ME ring_alpha 1 0.857142857143
+Euryarchaeota.Thermoplasmata.Thermoplasmatales.Aciduloprofundaceae.Aciduliprofundum.boonei.T469 ring_alpha 1 0.428571428571
+Euryarchaeota.Methanobacteria.Methanobacteriales.Methanobacteriaceae.Methanobrevibacter.smithii.DSM_2375 ring_alpha 1 0.428571428571
+Euryarchaeota.Halobacteria.Halobacteriales.Halobacteriaceae.Haladaptatus.paucihalophilus.DX253 ring_alpha 1 1.0
+Euryarchaeota.Methanococci.Methanococcales.Methanocaldococcaceae.Methanocaldococcus.vulcanius.M7 ring_alpha 1 0.857142857143
+Euryarchaeota.Halobacteria.Halobacteriales.Halobacteriaceae.Halorhabdus.tiamatea.SARL4B ring_alpha 1 0.428571428571
+Crenarchaeota.Thermoprotei.Sulfolobales.Sulfolobaceae.Sulfolobus.islandicus.Y_N_15_51 ring_alpha 1 0.428571428571
+Crenarchaeota.Thermoprotei.Desulfurococcales.Desulfurococcaceae.Aeropyrum.pernix.K1 ring_alpha 1 0.428571428571
+Crenarchaeota.Thermoprotei.Thermoproteales.Thermoproteaceae.Vulcanisaeta.distributa.DSM_14429 ring_alpha 1 0.428571428571
+Crenarchaeota.Thermoprotei.Sulfolobales.Sulfolobaceae.Sulfolobus.solfataricus.98_2 ring_alpha 1 0.428571428571
+Crenarchaeota.Thermoprotei.Thermoproteales.Thermoproteaceae.Pyrobaculum.islandicum.DSM_4184 ring_alpha 1 0.428571428571
+Crenarchaeota.Thermoprotei.Sulfolobales.Sulfolobaceae.Sulfolobus.islandicus.M_14_25 ring_alpha 1 0.428571428571
+Crenarchaeota.Thermoprotei.Desulfurococcales.Desulfurococcaceae.Staphylothermus.marinus.F1 ring_alpha 1 0.428571428571
+Euryarchaeota.Thermococci.Thermococcales.Thermococcaceae.Pyrococcus.furiosus.DSM_3638 ring_alpha 1 0.428571428571
+Nanoarchaeota.Nanoarchaea.Nanoarchales.Nanoarchaceae.Nanoarchaeum.equitans.Kin4_M ring_alpha 1 1.0
+Euryarchaeota.Methanomicrobia.Methanosarcinales.Methanosaetaceae.Methanosaeta.thermophila.PT ring_alpha 1 0.857142857143
+Euryarchaeota.Thermoplasmata.Thermoplasmatales.Picrophilaceae.Picrophilus.torridus.DSM_9790 ring_alpha 1 0.428571428571
+Euryarchaeota.Halobacteria.Halobacteriales.Halobacteriaceae.Halorubrum.lacusprofundi.ATCC_49239 ring_alpha 1 1.0
+Crenarchaeota.Thermoprotei.Thermoproteales.Thermoproteaceae.Thermoproteus.uzoniensis.768_20 ring_alpha 1 0.428571428571
+Crenarchaeota.Thermoprotei.Sulfolobales.Sulfolobaceae.Sulfolobus.acidocaldarius.DSM_639 ring_alpha 1 0.428571428571
+Euryarchaeota.Halobacteria.Halobacteriales.Halobacteriaceae.Haloquadratum.walsbyi.C23 ring_alpha 1 0.857142857143
+Crenarchaeota.Thermoprotei.Sulfolobales.Sulfolobaceae.Sulfolobus.solfataricus.P2 ring_alpha 1 0.428571428571
+Crenarchaeota.Thermoprotei.Desulfurococcales.Desulfurococcaceae.Desulfurococcus.kamchatkensis.1221n ring_alpha 1 0.428571428571
+Euryarchaeota.Halobacteria.Halobacteriales.Halobacteriaceae.Halobacterium.sp_.NRC_1 ring_alpha 1 0.428571428571
+Crenarchaeota.Thermoprotei.Sulfolobales.Sulfolobaceae.Sulfolobus.islandicus.Y_G_57_14 ring_alpha 1 0.428571428571
+Crenarchaeota.Thermoprotei.Thermoproteales.Thermoproteaceae.Pyrobaculum.calidifontis.JCM_11548 ring_alpha 1 0.428571428571
+Euryarchaeota.Halobacteria.Halobacteriales.Halobacteriaceae.Natrialba.magadii.ATCC_43099 ring_alpha 1 1.0
+Euryarchaeota.Halobacteria.Halobacteriales.Halobacteriaceae.Haloterrigena.turkmenica.DSM_5511 ring_alpha 1 1.0
+Euryarchaeota.Methanococci.Methanococcales.Methanococcaceae.Methanococcus.aeolicus.Nankai_3 ring_alpha 1 0.857142857143
+Euryarchaeota.Thermococci.Thermococcales.Thermococcaceae.Thermococcus.sp_.4557 ring_alpha 1 0.428571428571
+Crenarchaeota.Thermoprotei.Desulfurococcales.Desulfurococcaceae.Staphylothermus.hellenicus.DSM_12710 ring_alpha 1 0.428571428571
+Euryarchaeota.Methanomicrobia.Methanomicrobiales.Methanoregulaceae.Methanosphaerula.Methanosphaerula.palustris_E1_9c ring_alpha 1 1.0
+Euryarchaeota.Methanomicrobia.Methanomicrobiales.Methanocorpusculaceae.Methanocorpusculum.labreanum.Z ring_alpha 1 1.0
+Crenarchaeota.Thaumarchaeota.Nitrosopumilales.Nitrosopumilaceae.Nitrosopumilus.maritimus.SCM1 ring_alpha 1 0.428571428571
+Euryarchaeota.Methanococci.Methanococcales.Methanocaldococcaceae.Methanocaldococcus.jannaschii.DSM_2661 ring_alpha 1 0.857142857143
+Euryarchaeota.Methanomicrobia.Methanomicrobiales.Methanomicrobiaceae.Methanoplanus.petrolearius.DSM_11571 ring_alpha 1 0.857142857143
+Euryarchaeota.Thermococci.Thermococcales.Thermococcaceae.Pyrococcus.sp_.NA2 ring_alpha 1 0.428571428571
+Euryarchaeota.Thermococci.Thermococcales.Thermococcaceae.Pyrococcus.horikoshii.OT3 ring_alpha 1 0.428571428571
+Crenarchaeota.Korarchaeota.Korarchaeales.Korarchaeaceae.Candidatus_Korarchaeum.cryptofilum.cryptofilum_OPF8 ring_alpha 1 0.428571428571
+Euryarchaeota.Halobacteria.Halobacteriales.Halobacteriaceae.Halobacterium.salinarum.R1 ring_alpha 1 0.428571428571
+Euryarchaeota.Halobacteria.Halobacteriales.Halobacteriaceae.Natronomonas.pharaonis.DSM_2160 ring_alpha 1 0.428571428571
+Crenarchaeota.Thermoprotei.Desulfurococcales.Desulfurococcaceae.Thermosphaera.aggregans.DSM_11486 ring_alpha 1 0.428571428571
+Euryarchaeota.Thermococci.Thermococcales.Thermococcaceae.Pyrococcus.abyssi.GE5 ring_alpha 1 0.428571428571
+Crenarchaeota.Thermoprotei.Desulfurococcales.Desulfurococcaceae.Ignisphaera.aggregans.DSM_17230 ring_alpha 1 0.428571428571
+Crenarchaeota.Thermoprotei.Sulfolobales.Sulfolobaceae.Metallosphaera.sedula.DSM_5348 ring_alpha 1 0.428571428571
+Euryarchaeota.Methanococci.Methanococcales.Methanocaldococcaceae.Methanotorris.igneus.Kol_5 ring_alpha 1 0.857142857143
+Crenarchaeota.Thermoprotei.Sulfolobales.Sulfolobaceae.Sulfolobus.islandicus.HVE10_4 ring_alpha 1 0.428571428571
+Euryarchaeota.Methanococci.Methanococcales.Methanococcaceae.Methanococcus.maripaludis.S2 ring_alpha 1 1.0
+Euryarchaeota.Thermoplasmata.Thermoplasmatales.Thermoplasmataceae.Thermoplasma.acidophilum.DSM_1728 ring_alpha 1 0.428571428571
+Euryarchaeota.Thermococci.Thermococcales.Thermococcaceae.Thermococcus.sibiricus.MM_739 ring_alpha 1 0.428571428571
+Crenarchaeota.Thermoprotei.Sulfolobales.Sulfolobaceae.Sulfolobus.islandicus.M_16_27 ring_alpha 1 0.428571428571
+Crenarchaeota.Thermoprotei.Thermoproteales.Thermoproteaceae.Pyrobaculum.aerophilum.str__IM2 ring_alpha 1 0.428571428571
+Crenarchaeota.Thermoprotei.Thermoproteales.Thermoproteaceae.Caldivirga.maquilingensis.IC_167 ring_alpha 1 0.428571428571
+Euryarchaeota.Thermococci.Thermococcales.Thermococcaceae.Thermococcus.barophilus.MP ring_alpha 1 0.428571428571
+Euryarchaeota.Methanobacteria.Methanobacteriales.Methanobacteriaceae.Methanobrevibacter.smithii.ATCC_35061 ring_alpha 1 0.857142857143
+Euryarchaeota.Halobacteria.Halobacteriales.Halobacteriaceae.Halalkalicoccus.jeotgali.B3 ring_alpha 1 0.428571428571
+Euryarchaeota.Thermococci.Thermococcales.Thermococcaceae.Pyrococcus.yayanosii.CH1 ring_alpha 1 0.428571428571
+Euryarchaeota.Methanococci.Methanococcales.Methanococcaceae.Methanococcus.maripaludis.C5 ring_alpha 1 1.0
+Euryarchaeota.Methanococci.Methanococcales.Methanococcaceae.Methanococcus.maripaludis.C7 ring_alpha 1 1.0
+Euryarchaeota.Methanococci.Methanococcales.Methanococcaceae.Methanococcus.maripaludis.C6 ring_alpha 1 1.0
+Crenarchaeota.Thaumarchaeota.Cenarchaeales.Cenarchaeaceae.Cenarchaeum.symbiosum.A ring_alpha 1 0.428571428571
+Euryarchaeota.Thermococci.Thermococcales.Thermococcaceae.Thermococcus.gammatolerans.EJ3 ring_alpha 1 0.428571428571
+Euryarchaeota.Methanobacteria.Methanobacteriales.Methanobacteriaceae.Methanobacterium.sp_.SWAN_1 ring_alpha 1 1.0
+Euryarchaeota.Thermococci.Thermococcales.Thermococcaceae.Thermococcus.sp_.AM4 ring_alpha 1 0.428571428571
+Crenarchaeota.Thermoprotei.Sulfolobales.Sulfolobaceae.Sulfolobus.islandicus.REY15A ring_alpha 1 0.428571428571
+Euryarchaeota.Halobacteria.Halobacteriales.Halobacteriaceae.Halorhabdus.utahensis.DSM_12940 ring_alpha 1 0.428571428571
+Crenarchaeota.Thermoprotei.Desulfurococcales.Pyrodictiaceae.Hyperthermus.butylicus.DSM_5456 ring_alpha 1 0.428571428571
+Euryarchaeota.Methanomicrobia.Methanomicrobiales.Methanocullaceae.Methanoculleus.marisnigri.JR1 ring_alpha 1 0.428571428571
+Euryarchaeota.Methanobacteria.Methanobacteriales.Methanobacteriaceae.Methanobacterium.sp_.AL_21 ring_alpha 1 0.857142857143
+Euryarchaeota.Halobacteria.Halobacteriales.Halobacteriaceae.Halogeometricum.borinquense.DSM_11551 ring_alpha 1 0.857142857143
+Euryarchaeota.Methanomicrobia.Methanosarcinales.Methanosarcinaceae.Methanosarcina.barkeri.str__fusaro ring_alpha 1 1.0
+Euryarchaeota.Methanomicrobia.Methanomicrobiales.Methanoregulaceae.Methanoregula.boonei.boonei_6A8 ring_alpha 1 0.428571428571
+Crenarchaeota.Thermoprotei.Thermoproteales.Thermoproteaceae.Thermoproteus.neutrophilus.V24Sta ring_alpha 1 0.428571428571
+Euryarchaeota.Methanomicrobia.Methanocellales.Methanocellaceae.Methanocella.sp_.archaeon_RC_I ring_alpha 1 1.0
+Euryarchaeota.Halobacteria.Halobacteriales.Haloarculaceae.Haloarcula.marismortui.ATCC_43049 ring_alpha 1 1.0
+Euryarchaeota.Methanomicrobia.Methanosarcinales.Methanosarcinaceae.Methanosarcina.mazei.Go1 ring_color 1 #0000FF
+Euryarchaeota.Methanococci.Methanococcales.Methanococcaceae.Methanothermococcus.okinawensis.IH1 ring_color 1 #0000FF
+Crenarchaeota.Thermoprotei.Thermoproteales.Thermoproteaceae.Vulcanisaeta.moutnovskia.768_28 ring_color 1 #0000FF
+Euryarchaeota.Methanomicrobia.Methanomicrobiales.Methanospirillaceae.Methanospirillum.hungatei.JF_1 ring_color 1 #0000FF
+Euryarchaeota.Methanomicrobia.Methanosarcinales.Methanosarcinaceae.Methanosarcina.acetivorans.C2A ring_color 1 #0000FF
+Crenarchaeota.Thermoprotei.Sulfolobales.Sulfolobaceae.Sulfolobus.islandicus.L_S_2_15 ring_color 1 #0000FF
+Euryarchaeota.Methanobacteria.Methanobacteriales.Methanobacteriaceae.Methanothermobacter.marburgensis.str__Marburg ring_color 1 #0000FF
+Crenarchaeota.Thaumarchaeota.Nitrosopumilales.Nitrosopumilaceae.Nitrosopumilus.sp_.MY1 ring_color 1 #0000FF
+Euryarchaeota.Thermoplasmata.Thermoplasmatales.Ferroplasmaceae.Ferroplasma.acidarmanus.Fer1 ring_color 1 #0000FF
+Crenarchaeota.Thermoprotei.Sulfolobales.Sulfolobaceae.Metallosphaera.cuprina.Ar_4 ring_color 1 #0000FF
+Crenarchaeota.Thermoprotei.Sulfolobales.Sulfolobaceae.Sulfolobus.islandicus.L_D_8_5 ring_color 1 #0000FF
+Euryarchaeota.Methanococci.Methanococcales.Methanococcaceae.Methanococcus.vannielii.SB ring_color 1 #0000FF
+Euryarchaeota.Methanobacteria.Methanobacteriales.Methanobacteriaceae.Methanosphaera.stadtmanae.DSM_3091 ring_color 1 #0000FF
+Crenarchaeota.Thermoprotei.Thermoproteales.Thermofilaceae.Thermofilum.pendens.Hrk_5 ring_color 1 #0000FF
+Euryarchaeota.Methanococci.Methanococcales.Methanocaldococcaceae.Methanocaldococcus.sp_.FS406_22 ring_color 1 #0000FF
+Euryarchaeota.Halobacteria.Halobacteriales.Halobacteriaceae.Haloquadratum.walsbyi.DSM_16790 ring_color 1 #0000FF
+Euryarchaeota.Methanomicrobia.Methanosarcinales.Methanosarcinaceae.Methanococcoides.burtonii.DSM_6242 ring_color 1 #0000FF
+Crenarchaeota.Thermoprotei.Sulfolobales.Sulfolobaceae.Sulfolobus.tokodaii.str__7 ring_color 1 #0000FF
+Euryarchaeota.Thermococci.Thermococcales.Thermococcaceae.Thermococcus.onnurineus.NA1 ring_color 1 #0000FF
+Euryarchaeota.Methanobacteria.Methanobacteriales.Methanobacteriaceae.Methanothermobacter.thermautotrophicus.str__Delta_H ring_color 1 #0000FF
+Crenarchaeota.Thaumarchaeota.Nitrosopumilales.Nitrosopumilaceae.Candidatus_Nitrosoarchaeum.Nitrosoarchaeum.limnia_SFB1 ring_color 1 #0000FF
+Euryarchaeota.Archaeoglobi.Archaeoglobales.Archaeoglobaceae.Ferroglobus.placidus.DSM_10642 ring_color 1 #0000FF
+Euryarchaeota.Methanobacteria.Methanobacteriales.Methanothermaceae.Methanothermus.fervidus.DSM_2088 ring_color 1 #0000FF
+Euryarchaeota.Methanomicrobia.Methanosarcinales.Methanosaetaceae.Methanosaeta.concilii.GP6 ring_color 1 #0000FF
+Euryarchaeota.Methanococci.Methanococcales.Methanococcaceae.Methanococcus.voltae.A3 ring_color 1 #0000FF
+Euryarchaeota.Halobacteria.Halobacteriales.Halobacteriaceae.Haloferax.volcanii.DS2 ring_color 1 #0000FF
+Crenarchaeota.Thermoprotei.Sulfolobales.Sulfolobaceae.Sulfolobus.islandicus.M_16_4 ring_color 1 #0000FF
+Crenarchaeota.Thermoprotei.Desulfurococcales.Desulfurococcaceae.Ignicoccus.hospitalis.KIN4_I ring_color 1 #0000FF
+Crenarchaeota.Thermoprotei.Desulfurococcales.Desulfurococcaceae.Desulfurococcus.mucosus.DSM_2162 ring_color 1 #0000FF
+Euryarchaeota.Methanomicrobia.Methanosarcinales.Methanosarcinaceae.Methanohalobium.evestigatum.Z_7303 ring_color 1 #0000FF
+Crenarchaeota.Thermoprotei.Thermoproteales.Thermoproteaceae.Pyrobaculum.arsenaticum.DSM_13514 ring_color 1 #0000FF
+Crenarchaeota.Thermoprotei.Sulfolobales.Sulfolobaceae.Acidianus.hospitalis.W1 ring_color 1 #0000FF
+Crenarchaeota.Thermoprotei.Acidilobales.Acidilobaceae.Acidilobus.saccharovorans.345_15 ring_color 1 #0000FF
+Euryarchaeota.Halobacteria.Halobacteriales.Halobacteriaceae.Halomicrobium.mukohataei.DSM_12286 ring_color 1 #0000FF
+Euryarchaeota.Methanococci.Methanococcales.Methanocaldococcaceae.Methanocaldococcus.fervens.AG86 ring_color 1 #0000FF
+Euryarchaeota.Methanomicrobia.Methanocellales.Methanocellaceae.Methanocella.paludicola.SANAE ring_color 1 #0000FF
+Euryarchaeota.Thermoplasmata.Thermoplasmatales.Thermoplasmataceae.Thermoplasma.volcanium.GSS1 ring_color 1 #0000FF
+Euryarchaeota.Methanobacteria.Methanobacteriales.Methanobacteriaceae.Methanobrevibacter.ruminantium.M1 ring_color 1 #0000FF
+Euryarchaeota.Methanomicrobia.Methanosarcinales.Methanosarcinaceae.Methanohalophilus.mahii.DSM_5219 ring_color 1 #0000FF
+Euryarchaeota.Archaeoglobi.Archaeoglobales.Archaeoglobaceae.Archaeoglobus.profundus.DSM_5631 ring_color 1 #0000FF
+Euryarchaeota.Thermococci.Thermococcales.Thermococcaceae.Thermococcus.kodakaraensis.KOD1 ring_color 1 #0000FF
+Euryarchaeota.Methanopyri.Methanopyrales.Methanopyraceae.Methanopyrus.kandleri.AV19 ring_color 1 #0000FF
+Euryarchaeota.Archaeoglobi.Archaeoglobales.Archaeoglobaceae.Archaeoglobus.fulgidus.DSM_4304 ring_color 1 #0000FF
+Euryarchaeota.Methanococci.Methanococcales.Methanocaldococcaceae.Methanocaldococcus.infernus.ME ring_color 1 #0000FF
+Euryarchaeota.Thermoplasmata.Thermoplasmatales.Aciduloprofundaceae.Aciduliprofundum.boonei.T469 ring_color 1 #0000FF
+Euryarchaeota.Methanobacteria.Methanobacteriales.Methanobacteriaceae.Methanobrevibacter.smithii.DSM_2375 ring_color 1 #0000FF
+Euryarchaeota.Halobacteria.Halobacteriales.Halobacteriaceae.Haladaptatus.paucihalophilus.DX253 ring_color 1 #0000FF
+Euryarchaeota.Methanococci.Methanococcales.Methanocaldococcaceae.Methanocaldococcus.vulcanius.M7 ring_color 1 #0000FF
+Euryarchaeota.Halobacteria.Halobacteriales.Halobacteriaceae.Halorhabdus.tiamatea.SARL4B ring_color 1 #0000FF
+Crenarchaeota.Thermoprotei.Sulfolobales.Sulfolobaceae.Sulfolobus.islandicus.Y_N_15_51 ring_color 1 #0000FF
+Crenarchaeota.Thermoprotei.Desulfurococcales.Desulfurococcaceae.Aeropyrum.pernix.K1 ring_color 1 #0000FF
+Crenarchaeota.Thermoprotei.Thermoproteales.Thermoproteaceae.Vulcanisaeta.distributa.DSM_14429 ring_color 1 #0000FF
+Crenarchaeota.Thermoprotei.Sulfolobales.Sulfolobaceae.Sulfolobus.solfataricus.98_2 ring_color 1 #0000FF
+Crenarchaeota.Thermoprotei.Thermoproteales.Thermoproteaceae.Pyrobaculum.islandicum.DSM_4184 ring_color 1 #0000FF
+Crenarchaeota.Thermoprotei.Sulfolobales.Sulfolobaceae.Sulfolobus.islandicus.M_14_25 ring_color 1 #0000FF
+Crenarchaeota.Thermoprotei.Desulfurococcales.Desulfurococcaceae.Staphylothermus.marinus.F1 ring_color 1 #0000FF
+Euryarchaeota.Thermococci.Thermococcales.Thermococcaceae.Pyrococcus.furiosus.DSM_3638 ring_color 1 #0000FF
+Nanoarchaeota.Nanoarchaea.Nanoarchales.Nanoarchaceae.Nanoarchaeum.equitans.Kin4_M ring_color 1 #0000FF
+Euryarchaeota.Methanomicrobia.Methanosarcinales.Methanosaetaceae.Methanosaeta.thermophila.PT ring_color 1 #0000FF
+Euryarchaeota.Thermoplasmata.Thermoplasmatales.Picrophilaceae.Picrophilus.torridus.DSM_9790 ring_color 1 #0000FF
+Euryarchaeota.Halobacteria.Halobacteriales.Halobacteriaceae.Halorubrum.lacusprofundi.ATCC_49239 ring_color 1 #0000FF
+Crenarchaeota.Thermoprotei.Thermoproteales.Thermoproteaceae.Thermoproteus.uzoniensis.768_20 ring_color 1 #0000FF
+Crenarchaeota.Thermoprotei.Sulfolobales.Sulfolobaceae.Sulfolobus.acidocaldarius.DSM_639 ring_color 1 #0000FF
+Euryarchaeota.Halobacteria.Halobacteriales.Halobacteriaceae.Haloquadratum.walsbyi.C23 ring_color 1 #0000FF
+Crenarchaeota.Thermoprotei.Sulfolobales.Sulfolobaceae.Sulfolobus.solfataricus.P2 ring_color 1 #0000FF
+Crenarchaeota.Thermoprotei.Desulfurococcales.Desulfurococcaceae.Desulfurococcus.kamchatkensis.1221n ring_color 1 #0000FF
+Euryarchaeota.Halobacteria.Halobacteriales.Halobacteriaceae.Halobacterium.sp_.NRC_1 ring_color 1 #0000FF
+Crenarchaeota.Thermoprotei.Sulfolobales.Sulfolobaceae.Sulfolobus.islandicus.Y_G_57_14 ring_color 1 #0000FF
+Crenarchaeota.Thermoprotei.Thermoproteales.Thermoproteaceae.Pyrobaculum.calidifontis.JCM_11548 ring_color 1 #0000FF
+Euryarchaeota.Halobacteria.Halobacteriales.Halobacteriaceae.Natrialba.magadii.ATCC_43099 ring_color 1 #0000FF
+Euryarchaeota.Halobacteria.Halobacteriales.Halobacteriaceae.Haloterrigena.turkmenica.DSM_5511 ring_color 1 #0000FF
+Euryarchaeota.Methanococci.Methanococcales.Methanococcaceae.Methanococcus.aeolicus.Nankai_3 ring_color 1 #0000FF
+Euryarchaeota.Thermococci.Thermococcales.Thermococcaceae.Thermococcus.sp_.4557 ring_color 1 #0000FF
+Crenarchaeota.Thermoprotei.Desulfurococcales.Desulfurococcaceae.Staphylothermus.hellenicus.DSM_12710 ring_color 1 #0000FF
+Euryarchaeota.Methanomicrobia.Methanomicrobiales.Methanoregulaceae.Methanosphaerula.Methanosphaerula.palustris_E1_9c ring_color 1 #0000FF
+Euryarchaeota.Methanomicrobia.Methanomicrobiales.Methanocorpusculaceae.Methanocorpusculum.labreanum.Z ring_color 1 #0000FF
+Crenarchaeota.Thaumarchaeota.Nitrosopumilales.Nitrosopumilaceae.Nitrosopumilus.maritimus.SCM1 ring_color 1 #0000FF
+Euryarchaeota.Methanococci.Methanococcales.Methanocaldococcaceae.Methanocaldococcus.jannaschii.DSM_2661 ring_color 1 #0000FF
+Euryarchaeota.Methanomicrobia.Methanomicrobiales.Methanomicrobiaceae.Methanoplanus.petrolearius.DSM_11571 ring_color 1 #0000FF
+Euryarchaeota.Thermococci.Thermococcales.Thermococcaceae.Pyrococcus.sp_.NA2 ring_color 1 #0000FF
+Euryarchaeota.Thermococci.Thermococcales.Thermococcaceae.Pyrococcus.horikoshii.OT3 ring_color 1 #0000FF
+Crenarchaeota.Korarchaeota.Korarchaeales.Korarchaeaceae.Candidatus_Korarchaeum.cryptofilum.cryptofilum_OPF8 ring_color 1 #0000FF
+Euryarchaeota.Halobacteria.Halobacteriales.Halobacteriaceae.Halobacterium.salinarum.R1 ring_color 1 #0000FF
+Euryarchaeota.Halobacteria.Halobacteriales.Halobacteriaceae.Natronomonas.pharaonis.DSM_2160 ring_color 1 #0000FF
+Crenarchaeota.Thermoprotei.Desulfurococcales.Desulfurococcaceae.Thermosphaera.aggregans.DSM_11486 ring_color 1 #0000FF
+Euryarchaeota.Thermococci.Thermococcales.Thermococcaceae.Pyrococcus.abyssi.GE5 ring_color 1 #0000FF
+Crenarchaeota.Thermoprotei.Desulfurococcales.Desulfurococcaceae.Ignisphaera.aggregans.DSM_17230 ring_color 1 #0000FF
+Crenarchaeota.Thermoprotei.Sulfolobales.Sulfolobaceae.Metallosphaera.sedula.DSM_5348 ring_color 1 #0000FF
+Euryarchaeota.Methanococci.Methanococcales.Methanocaldococcaceae.Methanotorris.igneus.Kol_5 ring_color 1 #0000FF
+Crenarchaeota.Thermoprotei.Sulfolobales.Sulfolobaceae.Sulfolobus.islandicus.HVE10_4 ring_color 1 #0000FF
+Euryarchaeota.Methanococci.Methanococcales.Methanococcaceae.Methanococcus.maripaludis.S2 ring_color 1 #0000FF
+Euryarchaeota.Thermoplasmata.Thermoplasmatales.Thermoplasmataceae.Thermoplasma.acidophilum.DSM_1728 ring_color 1 #0000FF
+Euryarchaeota.Thermococci.Thermococcales.Thermococcaceae.Thermococcus.sibiricus.MM_739 ring_color 1 #0000FF
+Crenarchaeota.Thermoprotei.Sulfolobales.Sulfolobaceae.Sulfolobus.islandicus.M_16_27 ring_color 1 #0000FF
+Crenarchaeota.Thermoprotei.Thermoproteales.Thermoproteaceae.Pyrobaculum.aerophilum.str__IM2 ring_color 1 #0000FF
+Crenarchaeota.Thermoprotei.Thermoproteales.Thermoproteaceae.Caldivirga.maquilingensis.IC_167 ring_color 1 #0000FF
+Euryarchaeota.Thermococci.Thermococcales.Thermococcaceae.Thermococcus.barophilus.MP ring_color 1 #0000FF
+Euryarchaeota.Methanobacteria.Methanobacteriales.Methanobacteriaceae.Methanobrevibacter.smithii.ATCC_35061 ring_color 1 #0000FF
+Euryarchaeota.Halobacteria.Halobacteriales.Halobacteriaceae.Halalkalicoccus.jeotgali.B3 ring_color 1 #0000FF
+Euryarchaeota.Thermococci.Thermococcales.Thermococcaceae.Pyrococcus.yayanosii.CH1 ring_color 1 #0000FF
+Euryarchaeota.Methanococci.Methanococcales.Methanococcaceae.Methanococcus.maripaludis.C5 ring_color 1 #0000FF
+Euryarchaeota.Methanococci.Methanococcales.Methanococcaceae.Methanococcus.maripaludis.C7 ring_color 1 #0000FF
+Euryarchaeota.Methanococci.Methanococcales.Methanococcaceae.Methanococcus.maripaludis.C6 ring_color 1 #0000FF
+Crenarchaeota.Thaumarchaeota.Cenarchaeales.Cenarchaeaceae.Cenarchaeum.symbiosum.A ring_color 1 #0000FF
+Euryarchaeota.Thermococci.Thermococcales.Thermococcaceae.Thermococcus.gammatolerans.EJ3 ring_color 1 #0000FF
+Euryarchaeota.Methanobacteria.Methanobacteriales.Methanobacteriaceae.Methanobacterium.sp_.SWAN_1 ring_color 1 #0000FF
+Euryarchaeota.Thermococci.Thermococcales.Thermococcaceae.Thermococcus.sp_.AM4 ring_color 1 #0000FF
+Crenarchaeota.Thermoprotei.Sulfolobales.Sulfolobaceae.Sulfolobus.islandicus.REY15A ring_color 1 #0000FF
+Euryarchaeota.Halobacteria.Halobacteriales.Halobacteriaceae.Halorhabdus.utahensis.DSM_12940 ring_color 1 #0000FF
+Crenarchaeota.Thermoprotei.Desulfurococcales.Pyrodictiaceae.Hyperthermus.butylicus.DSM_5456 ring_color 1 #0000FF
+Euryarchaeota.Methanomicrobia.Methanomicrobiales.Methanocullaceae.Methanoculleus.marisnigri.JR1 ring_color 1 #0000FF
+Euryarchaeota.Methanobacteria.Methanobacteriales.Methanobacteriaceae.Methanobacterium.sp_.AL_21 ring_color 1 #0000FF
+Euryarchaeota.Halobacteria.Halobacteriales.Halobacteriaceae.Halogeometricum.borinquense.DSM_11551 ring_color 1 #0000FF
+Euryarchaeota.Methanomicrobia.Methanosarcinales.Methanosarcinaceae.Methanosarcina.barkeri.str__fusaro ring_color 1 #0000FF
+Euryarchaeota.Methanomicrobia.Methanomicrobiales.Methanoregulaceae.Methanoregula.boonei.boonei_6A8 ring_color 1 #0000FF
+Crenarchaeota.Thermoprotei.Thermoproteales.Thermoproteaceae.Thermoproteus.neutrophilus.V24Sta ring_color 1 #0000FF
+Euryarchaeota.Methanomicrobia.Methanocellales.Methanocellaceae.Methanocella.sp_.archaeon_RC_I ring_color 1 #0000FF
+Euryarchaeota.Halobacteria.Halobacteriales.Haloarculaceae.Haloarcula.marismortui.ATCC_43049 ring_color 1 #0000FF
+Euryarchaeota.Methanobacteria.Methanobacteriales.Methanobacteriaceae.Methanobrevibacter.smithii.DSM_2374 ring_color 1 #FF0000
+Euryarchaeota.Methanobacteria.Methanobacteriales.Methanothermaceae.Methanothermus.fervidus.DSM_2088 ring_color 2 #00FF00
+Euryarchaeota.Methanobacteria.Methanobacteriales.Methanobacteriaceae.Methanobrevibacter.smithii.DSM_2374 ring_color 2 #00FF00
+Euryarchaeota.Methanobacteria.Methanobacteriales.Methanobacteriaceae.Methanobrevibacter.smithii.ATCC_35061 ring_color 2 #00FF00
+Euryarchaeota.Methanomicrobia.Methanosarcinales.Methanosarcinaceae.Methanosarcina.mazei.Go1 ring_color 2 #FF0000
+Euryarchaeota.Methanococci.Methanococcales.Methanococcaceae.Methanothermococcus.okinawensis.IH1 ring_color 2 #FF0000
+Euryarchaeota.Methanomicrobia.Methanomicrobiales.Methanospirillaceae.Methanospirillum.hungatei.JF_1 ring_color 2 #FF0000
+Euryarchaeota.Methanomicrobia.Methanosarcinales.Methanosarcinaceae.Methanosarcina.acetivorans.C2A ring_color 2 #FF0000
+Crenarchaeota.Thermoprotei.Sulfolobales.Sulfolobaceae.Sulfolobus.islandicus.L_S_2_15 ring_color 2 #FF0000
+Euryarchaeota.Methanobacteria.Methanobacteriales.Methanobacteriaceae.Methanothermobacter.marburgensis.str__Marburg ring_color 2 #FF0000
+Euryarchaeota.Thermoplasmata.Thermoplasmatales.Ferroplasmaceae.Ferroplasma.acidarmanus.Fer1 ring_color 2 #FF0000
+Crenarchaeota.Thermoprotei.Sulfolobales.Sulfolobaceae.Metallosphaera.cuprina.Ar_4 ring_color 2 #FF0000
+Crenarchaeota.Thermoprotei.Sulfolobales.Sulfolobaceae.Sulfolobus.islandicus.L_D_8_5 ring_color 2 #FF0000
+Euryarchaeota.Methanococci.Methanococcales.Methanococcaceae.Methanococcus.vannielii.SB ring_color 2 #FF0000
+Euryarchaeota.Methanobacteria.Methanobacteriales.Methanobacteriaceae.Methanosphaera.stadtmanae.DSM_3091 ring_color 2 #FF0000
+Crenarchaeota.Thermoprotei.Thermoproteales.Thermofilaceae.Thermofilum.pendens.Hrk_5 ring_color 2 #FF0000
+Euryarchaeota.Methanococci.Methanococcales.Methanocaldococcaceae.Methanocaldococcus.sp_.FS406_22 ring_color 2 #FF0000
+Euryarchaeota.Halobacteria.Halobacteriales.Halobacteriaceae.Haloquadratum.walsbyi.DSM_16790 ring_color 2 #FF0000
+Euryarchaeota.Methanomicrobia.Methanosarcinales.Methanosarcinaceae.Methanococcoides.burtonii.DSM_6242 ring_color 2 #FF0000
+Crenarchaeota.Thermoprotei.Sulfolobales.Sulfolobaceae.Sulfolobus.tokodaii.str__7 ring_color 2 #FF0000
+Euryarchaeota.Thermococci.Thermococcales.Thermococcaceae.Thermococcus.onnurineus.NA1 ring_color 2 #FF0000
+Euryarchaeota.Methanobacteria.Methanobacteriales.Methanobacteriaceae.Methanothermobacter.thermautotrophicus.str__Delta_H ring_color 2 #FF0000
+Euryarchaeota.Archaeoglobi.Archaeoglobales.Archaeoglobaceae.Ferroglobus.placidus.DSM_10642 ring_color 2 #FF0000
+Euryarchaeota.Methanomicrobia.Methanosarcinales.Methanosaetaceae.Methanosaeta.concilii.GP6 ring_color 2 #FF0000
+Euryarchaeota.Methanococci.Methanococcales.Methanococcaceae.Methanococcus.voltae.A3 ring_color 2 #FF0000
+Euryarchaeota.Halobacteria.Halobacteriales.Halobacteriaceae.Haloferax.volcanii.DS2 ring_color 2 #FF0000
+Crenarchaeota.Thermoprotei.Sulfolobales.Sulfolobaceae.Sulfolobus.islandicus.M_16_4 ring_color 2 #FF0000
+Crenarchaeota.Thermoprotei.Desulfurococcales.Desulfurococcaceae.Ignicoccus.hospitalis.KIN4_I ring_color 2 #FF0000
+Euryarchaeota.Methanomicrobia.Methanosarcinales.Methanosarcinaceae.Methanohalobium.evestigatum.Z_7303 ring_color 2 #FF0000
+Crenarchaeota.Thermoprotei.Thermoproteales.Thermoproteaceae.Pyrobaculum.arsenaticum.DSM_13514 ring_color 2 #FF0000
+Crenarchaeota.Thermoprotei.Sulfolobales.Sulfolobaceae.Acidianus.hospitalis.W1 ring_color 2 #FF0000
+Crenarchaeota.Thermoprotei.Acidilobales.Acidilobaceae.Acidilobus.saccharovorans.345_15 ring_color 2 #FF0000
+Euryarchaeota.Methanococci.Methanococcales.Methanocaldococcaceae.Methanocaldococcus.fervens.AG86 ring_color 2 #FF0000
+Euryarchaeota.Methanomicrobia.Methanocellales.Methanocellaceae.Methanocella.paludicola.SANAE ring_color 2 #FF0000
+Euryarchaeota.Thermoplasmata.Thermoplasmatales.Thermoplasmataceae.Thermoplasma.volcanium.GSS1 ring_color 2 #FF0000
+Euryarchaeota.Methanobacteria.Methanobacteriales.Methanobacteriaceae.Methanobrevibacter.ruminantium.M1 ring_color 2 #FF0000
+Euryarchaeota.Methanomicrobia.Methanosarcinales.Methanosarcinaceae.Methanohalophilus.mahii.DSM_5219 ring_color 2 #FF0000
+Euryarchaeota.Thermococci.Thermococcales.Thermococcaceae.Thermococcus.kodakaraensis.KOD1 ring_color 2 #FF0000
+Euryarchaeota.Methanopyri.Methanopyrales.Methanopyraceae.Methanopyrus.kandleri.AV19 ring_color 2 #FF0000
+Euryarchaeota.Archaeoglobi.Archaeoglobales.Archaeoglobaceae.Archaeoglobus.fulgidus.DSM_4304 ring_color 2 #FF0000
+Euryarchaeota.Methanococci.Methanococcales.Methanocaldococcaceae.Methanocaldococcus.infernus.ME ring_color 2 #FF0000
+Euryarchaeota.Thermoplasmata.Thermoplasmatales.Aciduloprofundaceae.Aciduliprofundum.boonei.T469 ring_color 2 #FF0000
+Euryarchaeota.Halobacteria.Halobacteriales.Halobacteriaceae.Haladaptatus.paucihalophilus.DX253 ring_color 2 #FF0000
+Euryarchaeota.Methanococci.Methanococcales.Methanocaldococcaceae.Methanocaldococcus.vulcanius.M7 ring_color 2 #FF0000
+Crenarchaeota.Thermoprotei.Sulfolobales.Sulfolobaceae.Sulfolobus.islandicus.Y_N_15_51 ring_color 2 #FF0000
+Crenarchaeota.Thermoprotei.Desulfurococcales.Desulfurococcaceae.Aeropyrum.pernix.K1 ring_color 2 #FF0000
+Crenarchaeota.Thermoprotei.Sulfolobales.Sulfolobaceae.Sulfolobus.solfataricus.98_2 ring_color 2 #FF0000
+Crenarchaeota.Thermoprotei.Thermoproteales.Thermoproteaceae.Pyrobaculum.islandicum.DSM_4184 ring_color 2 #FF0000
+Crenarchaeota.Thermoprotei.Sulfolobales.Sulfolobaceae.Sulfolobus.islandicus.M_14_25 ring_color 2 #FF0000
+Crenarchaeota.Thermoprotei.Desulfurococcales.Desulfurococcaceae.Staphylothermus.marinus.F1 ring_color 2 #FF0000
+Euryarchaeota.Thermococci.Thermococcales.Thermococcaceae.Pyrococcus.furiosus.DSM_3638 ring_color 2 #FF0000
+Euryarchaeota.Methanomicrobia.Methanosarcinales.Methanosaetaceae.Methanosaeta.thermophila.PT ring_color 2 #FF0000
+Euryarchaeota.Thermoplasmata.Thermoplasmatales.Picrophilaceae.Picrophilus.torridus.DSM_9790 ring_color 2 #FF0000
+Euryarchaeota.Halobacteria.Halobacteriales.Halobacteriaceae.Halorubrum.lacusprofundi.ATCC_49239 ring_color 2 #FF0000
+Crenarchaeota.Thermoprotei.Thermoproteales.Thermoproteaceae.Thermoproteus.uzoniensis.768_20 ring_color 2 #FF0000
+Crenarchaeota.Thermoprotei.Sulfolobales.Sulfolobaceae.Sulfolobus.acidocaldarius.DSM_639 ring_color 2 #FF0000
+Euryarchaeota.Halobacteria.Halobacteriales.Halobacteriaceae.Haloquadratum.walsbyi.C23 ring_color 2 #FF0000
+Crenarchaeota.Thermoprotei.Sulfolobales.Sulfolobaceae.Sulfolobus.solfataricus.P2 ring_color 2 #FF0000
+Crenarchaeota.Thermoprotei.Desulfurococcales.Desulfurococcaceae.Desulfurococcus.kamchatkensis.1221n ring_color 2 #FF0000
+Euryarchaeota.Halobacteria.Halobacteriales.Halobacteriaceae.Halobacterium.sp_.NRC_1 ring_color 2 #FF0000
+Crenarchaeota.Thermoprotei.Sulfolobales.Sulfolobaceae.Sulfolobus.islandicus.Y_G_57_14 ring_color 2 #FF0000
+Crenarchaeota.Thermoprotei.Thermoproteales.Thermoproteaceae.Pyrobaculum.calidifontis.JCM_11548 ring_color 2 #FF0000
+Euryarchaeota.Halobacteria.Halobacteriales.Halobacteriaceae.Natrialba.magadii.ATCC_43099 ring_color 2 #FF0000
+Euryarchaeota.Methanococci.Methanococcales.Methanococcaceae.Methanococcus.aeolicus.Nankai_3 ring_color 2 #FF0000
+Euryarchaeota.Methanomicrobia.Methanomicrobiales.Methanocorpusculaceae.Methanocorpusculum.labreanum.Z ring_color 2 #FF0000
+Crenarchaeota.Thaumarchaeota.Nitrosopumilales.Nitrosopumilaceae.Nitrosopumilus.maritimus.SCM1 ring_color 2 #FF0000
+Euryarchaeota.Methanococci.Methanococcales.Methanocaldococcaceae.Methanocaldococcus.jannaschii.DSM_2661 ring_color 2 #FF0000
+Euryarchaeota.Thermococci.Thermococcales.Thermococcaceae.Pyrococcus.sp_.NA2 ring_color 2 #FF0000
+Euryarchaeota.Thermococci.Thermococcales.Thermococcaceae.Pyrococcus.horikoshii.OT3 ring_color 2 #FF0000
+Crenarchaeota.Korarchaeota.Korarchaeales.Korarchaeaceae.Candidatus_Korarchaeum.cryptofilum.cryptofilum_OPF8 ring_color 2 #FF0000
+Euryarchaeota.Halobacteria.Halobacteriales.Halobacteriaceae.Halobacterium.salinarum.R1 ring_color 2 #FF0000
+Euryarchaeota.Halobacteria.Halobacteriales.Halobacteriaceae.Natronomonas.pharaonis.DSM_2160 ring_color 2 #FF0000
+Euryarchaeota.Thermococci.Thermococcales.Thermococcaceae.Pyrococcus.abyssi.GE5 ring_color 2 #FF0000
+Crenarchaeota.Thermoprotei.Sulfolobales.Sulfolobaceae.Metallosphaera.sedula.DSM_5348 ring_color 2 #FF0000
+Euryarchaeota.Methanococci.Methanococcales.Methanocaldococcaceae.Methanotorris.igneus.Kol_5 ring_color 2 #FF0000
+Crenarchaeota.Thermoprotei.Sulfolobales.Sulfolobaceae.Sulfolobus.islandicus.HVE10_4 ring_color 2 #FF0000
+Euryarchaeota.Methanococci.Methanococcales.Methanococcaceae.Methanococcus.maripaludis.S2 ring_color 2 #FF0000
+Euryarchaeota.Thermoplasmata.Thermoplasmatales.Thermoplasmataceae.Thermoplasma.acidophilum.DSM_1728 ring_color 2 #FF0000
+Euryarchaeota.Thermococci.Thermococcales.Thermococcaceae.Thermococcus.sibiricus.MM_739 ring_color 2 #FF0000
+Crenarchaeota.Thermoprotei.Sulfolobales.Sulfolobaceae.Sulfolobus.islandicus.M_16_27 ring_color 2 #FF0000
+Crenarchaeota.Thermoprotei.Thermoproteales.Thermoproteaceae.Pyrobaculum.aerophilum.str__IM2 ring_color 2 #FF0000
+Crenarchaeota.Thermoprotei.Thermoproteales.Thermoproteaceae.Caldivirga.maquilingensis.IC_167 ring_color 2 #FF0000
+Euryarchaeota.Thermococci.Thermococcales.Thermococcaceae.Thermococcus.barophilus.MP ring_color 2 #FF0000
+Euryarchaeota.Thermococci.Thermococcales.Thermococcaceae.Pyrococcus.yayanosii.CH1 ring_color 2 #FF0000
+Euryarchaeota.Methanococci.Methanococcales.Methanococcaceae.Methanococcus.maripaludis.C5 ring_color 2 #FF0000
+Euryarchaeota.Methanococci.Methanococcales.Methanococcaceae.Methanococcus.maripaludis.C7 ring_color 2 #FF0000
+Euryarchaeota.Methanococci.Methanococcales.Methanococcaceae.Methanococcus.maripaludis.C6 ring_color 2 #FF0000
+Crenarchaeota.Thaumarchaeota.Cenarchaeales.Cenarchaeaceae.Cenarchaeum.symbiosum.A ring_color 2 #FF0000
+Euryarchaeota.Thermococci.Thermococcales.Thermococcaceae.Thermococcus.gammatolerans.EJ3 ring_color 2 #FF0000
+Euryarchaeota.Methanobacteria.Methanobacteriales.Methanobacteriaceae.Methanobacterium.sp_.SWAN_1 ring_color 2 #FF0000
+Euryarchaeota.Thermococci.Thermococcales.Thermococcaceae.Thermococcus.sp_.AM4 ring_color 2 #FF0000
+Crenarchaeota.Thermoprotei.Sulfolobales.Sulfolobaceae.Sulfolobus.islandicus.REY15A ring_color 2 #FF0000
+Euryarchaeota.Halobacteria.Halobacteriales.Halobacteriaceae.Halorhabdus.utahensis.DSM_12940 ring_color 2 #FF0000
+Crenarchaeota.Thermoprotei.Desulfurococcales.Pyrodictiaceae.Hyperthermus.butylicus.DSM_5456 ring_color 2 #FF0000
+Euryarchaeota.Methanomicrobia.Methanomicrobiales.Methanocullaceae.Methanoculleus.marisnigri.JR1 ring_color 2 #FF0000
+Euryarchaeota.Methanobacteria.Methanobacteriales.Methanobacteriaceae.Methanobacterium.sp_.AL_21 ring_color 2 #FF0000
+Euryarchaeota.Methanomicrobia.Methanosarcinales.Methanosarcinaceae.Methanosarcina.barkeri.str__fusaro ring_color 2 #FF0000
+Euryarchaeota.Methanomicrobia.Methanomicrobiales.Methanoregulaceae.Methanoregula.boonei.boonei_6A8 ring_color 2 #FF0000
+Crenarchaeota.Thermoprotei.Thermoproteales.Thermoproteaceae.Thermoproteus.neutrophilus.V24Sta ring_color 2 #FF0000
+Euryarchaeota.Methanomicrobia.Methanocellales.Methanocellaceae.Methanocella.sp_.archaeon_RC_I ring_color 2 #FF0000
+Euryarchaeota.Halobacteria.Halobacteriales.Haloarculaceae.Haloarcula.marismortui.ATCC_43049 ring_color 2 #FF0000
+Euryarchaeota.Methanomicrobia.Methanosarcinales.Methanosarcinaceae.Methanosarcina.mazei.Go1 ring_color 3 #8B0000
+Euryarchaeota.Methanococci.Methanococcales.Methanococcaceae.Methanothermococcus.okinawensis.IH1 ring_color 3 #8B0000
+Crenarchaeota.Thermoprotei.Thermoproteales.Thermoproteaceae.Vulcanisaeta.moutnovskia.768_28 ring_color 3 #DD0000
+Euryarchaeota.Methanomicrobia.Methanomicrobiales.Methanospirillaceae.Methanospirillum.hungatei.JF_1 ring_color 3 #8B0000
+Euryarchaeota.Methanomicrobia.Methanosarcinales.Methanosarcinaceae.Methanosarcina.acetivorans.C2A ring_color 3 #8B0000
+Crenarchaeota.Thermoprotei.Sulfolobales.Sulfolobaceae.Sulfolobus.islandicus.L_S_2_15 ring_color 3 #008B00
+Euryarchaeota.Methanobacteria.Methanobacteriales.Methanobacteriaceae.Methanothermobacter.marburgensis.str__Marburg ring_color 3 #DD0000
+Euryarchaeota.Thermoplasmata.Thermoplasmatales.Ferroplasmaceae.Ferroplasma.acidarmanus.Fer1 ring_color 3 #000000
+Crenarchaeota.Thermoprotei.Sulfolobales.Sulfolobaceae.Metallosphaera.cuprina.Ar_4 ring_color 3 #000000
+Crenarchaeota.Thermoprotei.Sulfolobales.Sulfolobaceae.Sulfolobus.islandicus.L_D_8_5 ring_color 3 #008B00
+Euryarchaeota.Methanococci.Methanococcales.Methanococcaceae.Methanococcus.vannielii.SB ring_color 3 #8B0000
+Euryarchaeota.Methanobacteria.Methanobacteriales.Methanobacteriaceae.Methanosphaera.stadtmanae.DSM_3091 ring_color 3 #8B0000
+Crenarchaeota.Thermoprotei.Thermoproteales.Thermofilaceae.Thermofilum.pendens.Hrk_5 ring_color 3 #8B0000
+Euryarchaeota.Methanomicrobia.Methanosarcinales.Methanosarcinaceae.Methanococcoides.burtonii.DSM_6242 ring_color 3 #8B0000
+Crenarchaeota.Thermoprotei.Sulfolobales.Sulfolobaceae.Sulfolobus.tokodaii.str__7 ring_color 3 #008B00
+Euryarchaeota.Thermococci.Thermococcales.Thermococcaceae.Thermococcus.onnurineus.NA1 ring_color 3 #8B0000
+Euryarchaeota.Methanobacteria.Methanobacteriales.Methanobacteriaceae.Methanothermobacter.thermautotrophicus.str__Delta_H ring_color 3 #DD0000
+Euryarchaeota.Archaeoglobi.Archaeoglobales.Archaeoglobaceae.Ferroglobus.placidus.DSM_10642 ring_color 3 #8B0000
+Euryarchaeota.Methanobacteria.Methanobacteriales.Methanothermaceae.Methanothermus.fervidus.DSM_2088 ring_color 3 #DD0000
+Euryarchaeota.Methanomicrobia.Methanosarcinales.Methanosaetaceae.Methanosaeta.concilii.GP6 ring_color 3 #8B0000
+Euryarchaeota.Methanococci.Methanococcales.Methanococcaceae.Methanococcus.voltae.A3 ring_color 3 #8B0000
+Euryarchaeota.Halobacteria.Halobacteriales.Halobacteriaceae.Haloferax.volcanii.DS2 ring_color 3 #008B00
+Crenarchaeota.Thermoprotei.Sulfolobales.Sulfolobaceae.Sulfolobus.islandicus.M_16_4 ring_color 3 #008B00
+Crenarchaeota.Thermoprotei.Desulfurococcales.Desulfurococcaceae.Ignicoccus.hospitalis.KIN4_I ring_color 3 #8B0000
+Euryarchaeota.Methanomicrobia.Methanosarcinales.Methanosarcinaceae.Methanohalobium.evestigatum.Z_7303 ring_color 3 #8B0000
+Crenarchaeota.Thermoprotei.Thermoproteales.Thermoproteaceae.Pyrobaculum.arsenaticum.DSM_13514 ring_color 3 #8B0000
+Crenarchaeota.Thermoprotei.Sulfolobales.Sulfolobaceae.Acidianus.hospitalis.W1 ring_color 3 #000000
+Crenarchaeota.Thermoprotei.Acidilobales.Acidilobaceae.Acidilobus.saccharovorans.345_15 ring_color 3 #8B0000
+Euryarchaeota.Methanococci.Methanococcales.Methanocaldococcaceae.Methanocaldococcus.fervens.AG86 ring_color 3 #8B0000
+Euryarchaeota.Methanomicrobia.Methanocellales.Methanocellaceae.Methanocella.paludicola.SANAE ring_color 3 #8B0000
+Euryarchaeota.Thermoplasmata.Thermoplasmatales.Thermoplasmataceae.Thermoplasma.volcanium.GSS1 ring_color 3 #000000
+Euryarchaeota.Methanobacteria.Methanobacteriales.Methanobacteriaceae.Methanobrevibacter.ruminantium.M1 ring_color 3 #8B0000
+Euryarchaeota.Methanomicrobia.Methanosarcinales.Methanosarcinaceae.Methanohalophilus.mahii.DSM_5219 ring_color 3 #8B0000
+Euryarchaeota.Thermococci.Thermococcales.Thermococcaceae.Thermococcus.kodakaraensis.KOD1 ring_color 3 #8B0000
+Euryarchaeota.Methanopyri.Methanopyrales.Methanopyraceae.Methanopyrus.kandleri.AV19 ring_color 3 #8B0000
+Euryarchaeota.Archaeoglobi.Archaeoglobales.Archaeoglobaceae.Archaeoglobus.fulgidus.DSM_4304 ring_color 3 #DD0000
+Euryarchaeota.Methanococci.Methanococcales.Methanocaldococcaceae.Methanocaldococcus.infernus.ME ring_color 3 #8B0000
+Euryarchaeota.Thermoplasmata.Thermoplasmatales.Aciduloprofundaceae.Aciduliprofundum.boonei.T469 ring_color 3 #000000
+Euryarchaeota.Methanobacteria.Methanobacteriales.Methanobacteriaceae.Methanobrevibacter.smithii.DSM_2374 ring_color 3 #8B0000
+Euryarchaeota.Halobacteria.Halobacteriales.Halobacteriaceae.Haladaptatus.paucihalophilus.DX253 ring_color 3 #008B00
+Euryarchaeota.Methanococci.Methanococcales.Methanocaldococcaceae.Methanocaldococcus.vulcanius.M7 ring_color 3 #8B0000
+Euryarchaeota.Halobacteria.Halobacteriales.Halobacteriaceae.Halorhabdus.tiamatea.SARL4B ring_color 3 #8B0000
+Crenarchaeota.Thermoprotei.Sulfolobales.Sulfolobaceae.Sulfolobus.islandicus.Y_N_15_51 ring_color 3 #000000
+Crenarchaeota.Thermoprotei.Desulfurococcales.Desulfurococcaceae.Aeropyrum.pernix.K1 ring_color 3 #008B00
+Crenarchaeota.Thermoprotei.Sulfolobales.Sulfolobaceae.Sulfolobus.solfataricus.98_2 ring_color 3 #00EE00
+Crenarchaeota.Thermoprotei.Thermoproteales.Thermoproteaceae.Pyrobaculum.islandicum.DSM_4184 ring_color 3 #8B0000
+Crenarchaeota.Thermoprotei.Sulfolobales.Sulfolobaceae.Sulfolobus.islandicus.M_14_25 ring_color 3 #008B00
+Crenarchaeota.Thermoprotei.Desulfurococcales.Desulfurococcaceae.Staphylothermus.marinus.F1 ring_color 3 #8B0000
+Euryarchaeota.Thermococci.Thermococcales.Thermococcaceae.Pyrococcus.furiosus.DSM_3638 ring_color 3 #DD0000
+Euryarchaeota.Methanomicrobia.Methanosarcinales.Methanosaetaceae.Methanosaeta.thermophila.PT ring_color 3 #8B0000
+Euryarchaeota.Thermoplasmata.Thermoplasmatales.Picrophilaceae.Picrophilus.torridus.DSM_9790 ring_color 3 #008B00
+Euryarchaeota.Halobacteria.Halobacteriales.Halobacteriaceae.Halorubrum.lacusprofundi.ATCC_49239 ring_color 3 #008B00
+Crenarchaeota.Thermoprotei.Thermoproteales.Thermoproteaceae.Thermoproteus.uzoniensis.768_20 ring_color 3 #DD0000
+Crenarchaeota.Thermoprotei.Sulfolobales.Sulfolobaceae.Sulfolobus.acidocaldarius.DSM_639 ring_color 3 #00EE00
+Euryarchaeota.Halobacteria.Halobacteriales.Halobacteriaceae.Haloquadratum.walsbyi.C23 ring_color 3 #008B00
+Crenarchaeota.Thermoprotei.Sulfolobales.Sulfolobaceae.Sulfolobus.solfataricus.P2 ring_color 3 #00EE00
+Crenarchaeota.Thermoprotei.Desulfurococcales.Desulfurococcaceae.Desulfurococcus.kamchatkensis.1221n ring_color 3 #DD0000
+Euryarchaeota.Halobacteria.Halobacteriales.Halobacteriaceae.Halobacterium.sp_.NRC_1 ring_color 3 #008B00
+Crenarchaeota.Thermoprotei.Sulfolobales.Sulfolobaceae.Sulfolobus.islandicus.Y_G_57_14 ring_color 3 #000000
+Crenarchaeota.Thermoprotei.Thermoproteales.Thermoproteaceae.Pyrobaculum.calidifontis.JCM_11548 ring_color 3 #000000
+Euryarchaeota.Halobacteria.Halobacteriales.Halobacteriaceae.Natrialba.magadii.ATCC_43099 ring_color 3 #008B00
+Euryarchaeota.Methanococci.Methanococcales.Methanococcaceae.Methanococcus.aeolicus.Nankai_3 ring_color 3 #8B0000
+Euryarchaeota.Thermococci.Thermococcales.Thermococcaceae.Thermococcus.sp_.4557 ring_color 3 #DD0000
+Euryarchaeota.Methanomicrobia.Methanomicrobiales.Methanocorpusculaceae.Methanocorpusculum.labreanum.Z ring_color 3 #8B0000
+Crenarchaeota.Thaumarchaeota.Nitrosopumilales.Nitrosopumilaceae.Nitrosopumilus.maritimus.SCM1 ring_color 3 #008B00
+Euryarchaeota.Methanococci.Methanococcales.Methanocaldococcaceae.Methanocaldococcus.jannaschii.DSM_2661 ring_color 3 #DD0000
+Euryarchaeota.Thermococci.Thermococcales.Thermococcaceae.Pyrococcus.sp_.NA2 ring_color 3 #DD0000
+Euryarchaeota.Thermococci.Thermococcales.Thermococcaceae.Pyrococcus.horikoshii.OT3 ring_color 3 #DD0000
+Euryarchaeota.Halobacteria.Halobacteriales.Halobacteriaceae.Halobacterium.salinarum.R1 ring_color 3 #00EE00
+Euryarchaeota.Halobacteria.Halobacteriales.Halobacteriaceae.Natronomonas.pharaonis.DSM_2160 ring_color 3 #008B00
+Euryarchaeota.Thermococci.Thermococcales.Thermococcaceae.Pyrococcus.abyssi.GE5 ring_color 3 #DD0000
+Crenarchaeota.Thermoprotei.Sulfolobales.Sulfolobaceae.Metallosphaera.sedula.DSM_5348 ring_color 3 #008B00
+Euryarchaeota.Methanococci.Methanococcales.Methanocaldococcaceae.Methanotorris.igneus.Kol_5 ring_color 3 #8B0000
+Crenarchaeota.Thermoprotei.Sulfolobales.Sulfolobaceae.Sulfolobus.islandicus.HVE10_4 ring_color 3 #000000
+Euryarchaeota.Methanococci.Methanococcales.Methanococcaceae.Methanococcus.maripaludis.S2 ring_color 3 #DD0000
+Euryarchaeota.Thermoplasmata.Thermoplasmatales.Thermoplasmataceae.Thermoplasma.acidophilum.DSM_1728 ring_color 3 #000000
+Euryarchaeota.Thermococci.Thermococcales.Thermococcaceae.Thermococcus.sibiricus.MM_739 ring_color 3 #8B0000
+Crenarchaeota.Thermoprotei.Sulfolobales.Sulfolobaceae.Sulfolobus.islandicus.M_16_27 ring_color 3 #008B00
+Crenarchaeota.Thermoprotei.Thermoproteales.Thermoproteaceae.Pyrobaculum.aerophilum.str__IM2 ring_color 3 #000000
+Crenarchaeota.Thermoprotei.Thermoproteales.Thermoproteaceae.Caldivirga.maquilingensis.IC_167 ring_color 3 #008B00
+Euryarchaeota.Thermococci.Thermococcales.Thermococcaceae.Thermococcus.barophilus.MP ring_color 3 #8B0000
+Euryarchaeota.Methanobacteria.Methanobacteriales.Methanobacteriaceae.Methanobrevibacter.smithii.ATCC_35061 ring_color 3 #8B0000
+Euryarchaeota.Thermococci.Thermococcales.Thermococcaceae.Pyrococcus.yayanosii.CH1 ring_color 3 #DD0000
+Euryarchaeota.Methanococci.Methanococcales.Methanococcaceae.Methanococcus.maripaludis.C5 ring_color 3 #DD0000
+Euryarchaeota.Methanococci.Methanococcales.Methanococcaceae.Methanococcus.maripaludis.C7 ring_color 3 #DD0000
+Euryarchaeota.Methanococci.Methanococcales.Methanococcaceae.Methanococcus.maripaludis.C6 ring_color 3 #DD0000
+Crenarchaeota.Thaumarchaeota.Cenarchaeales.Cenarchaeaceae.Cenarchaeum.symbiosum.A ring_color 3 #008B00
+Euryarchaeota.Thermococci.Thermococcales.Thermococcaceae.Thermococcus.gammatolerans.EJ3 ring_color 3 #8B0000
+Euryarchaeota.Thermococci.Thermococcales.Thermococcaceae.Thermococcus.sp_.AM4 ring_color 3 #8B0000
+Crenarchaeota.Thermoprotei.Sulfolobales.Sulfolobaceae.Sulfolobus.islandicus.REY15A ring_color 3 #000000
+Euryarchaeota.Halobacteria.Halobacteriales.Halobacteriaceae.Halorhabdus.utahensis.DSM_12940 ring_color 3 #008B00
+Crenarchaeota.Thermoprotei.Desulfurococcales.Pyrodictiaceae.Hyperthermus.butylicus.DSM_5456 ring_color 3 #8B0000
+Euryarchaeota.Methanomicrobia.Methanomicrobiales.Methanocullaceae.Methanoculleus.marisnigri.JR1 ring_color 3 #8B0000
+Euryarchaeota.Methanomicrobia.Methanosarcinales.Methanosarcinaceae.Methanosarcina.barkeri.str__fusaro ring_color 3 #8B0000
+Euryarchaeota.Methanomicrobia.Methanomicrobiales.Methanoregulaceae.Methanoregula.boonei.boonei_6A8 ring_color 3 #8B0000
+Crenarchaeota.Thermoprotei.Thermoproteales.Thermoproteaceae.Thermoproteus.neutrophilus.V24Sta ring_color 3 #8B0000
+Euryarchaeota.Halobacteria.Halobacteriales.Haloarculaceae.Haloarcula.marismortui.ATCC_43049 ring_color 3 #008B00
+Nitrosopumilaceae clade_marker_color #DD0000
+Nitrosopumilaceae annotation Nitrosopumilaceae
+Nitrosopumilaceae annotation_background_color #DD0000
+Methanocaldococcaceae clade_marker_color #DD0000
+Methanocaldococcaceae annotation Methanocaldococcaceae
+Methanocaldococcaceae annotation_background_color #DD0000
+Archaeoglobaceae clade_marker_color #DD0000
+Archaeoglobaceae annotation Archaeoglobaceae
+Archaeoglobaceae annotation_background_color #DD0000
+Thermoplasmataceae clade_marker_color #DD0000
+Thermoplasmataceae annotation *:*
+Thermoplasmataceae annotation_background_color #DD0000
+Methanosarcinaceae clade_marker_color #DD0000
+Methanosarcinaceae annotation Methanosarcinaceae
+Methanosarcinaceae annotation_background_color #DD0000
+Methanosaetaceae clade_marker_color #DD0000
+Methanosaetaceae annotation *:*
+Methanosaetaceae annotation_background_color #DD0000
+Methanobacteriaceae clade_marker_color #DD0000
+Methanobacteriaceae annotation Methanobacteriaceae
+Methanobacteriaceae annotation_background_color #DD0000
+Thermoproteaceae clade_marker_color #DD0000
+Thermoproteaceae annotation Thermoproteaceae
+Thermoproteaceae annotation_background_color #DD0000
+Thermococcaceae clade_marker_color #DD0000
+Thermococcaceae annotation Thermococcaceae
+Thermococcaceae annotation_background_color #DD0000
+Halobacteriaceae clade_marker_color #DD0000
+Halobacteriaceae annotation Halobacteriaceae
+Halobacteriaceae annotation_background_color #DD0000
+Desulfurococcaceae clade_marker_color #DD0000
+Desulfurococcaceae annotation Desulfurococcaceae
+Desulfurococcaceae annotation_background_color #DD0000
+Methanocellaceae clade_marker_color #DD0000
+Methanocellaceae annotation *:Methanocellaceae
+Methanocellaceae annotation_background_color #DD0000
+Sulfolobaceae clade_marker_color #DD0000
+Sulfolobaceae annotation Sulfolobaceae
+Sulfolobaceae annotation_background_color #DD0000
+Methanoregulaceae clade_marker_color #DD0000
+Methanoregulaceae annotation *:Methanoregulaceae
+Methanoregulaceae annotation_background_color #DD0000
+Methanococcaceae clade_marker_color #DD0000
+Methanococcaceae annotation Methanococcaceae
+Methanococcaceae annotation_background_color #DD0000
+#Crenarchaeota clade_marker_color #0000DD
+#Crenarchaeota annotation Crenarchaeota
+#Crenarchaeota annotation_background_color #0000DD
+#Euryarchaeota clade_marker_color #0000DD
+#Euryarchaeota annotation Euryarchaeota
+#Euryarchaeota annotation_background_color #0000DD
diff --git a/examples/archaea/archaea.txt b/examples/archaea/archaea.txt
new file mode 100644
index 0000000..c37da1a
--- /dev/null
+++ b/examples/archaea/archaea.txt
@@ -0,0 +1,121 @@
+Crenarchaeota.Korarchaeota.Korarchaeales.Korarchaeaceae.Candidatus_Korarchaeum.cryptofilum.cryptofilum_OPF8 641522611
+Crenarchaeota.Thaumarchaeota.Cenarchaeales.Cenarchaeaceae.Cenarchaeum.symbiosum.A 641522613
+Crenarchaeota.Thaumarchaeota.Nitrosopumilales.Nitrosopumilaceae.Candidatus_Nitrosoarchaeum.Nitrosoarchaeum.limnia_SFB1 651324018
+Crenarchaeota.Thaumarchaeota.Nitrosopumilales.Nitrosopumilaceae.Nitrosopumilus.maritimus.SCM1 641228499
+Crenarchaeota.Thaumarchaeota.Nitrosopumilales.Nitrosopumilaceae.Nitrosopumilus.sp_.MY1 651324076
+Crenarchaeota.Thermoprotei.Acidilobales.Acidilobaceae.Acidilobus.saccharovorans.345_15 648028003
+Crenarchaeota.Thermoprotei.Desulfurococcales.Desulfurococcaceae.Aeropyrum.pernix.K1 638154501
+Crenarchaeota.Thermoprotei.Desulfurococcales.Desulfurococcaceae.Desulfurococcus.kamchatkensis.1221n 643348540
+Crenarchaeota.Thermoprotei.Desulfurococcales.Desulfurococcaceae.Desulfurococcus.mucosus.DSM_2162 649633040
+Crenarchaeota.Thermoprotei.Desulfurococcales.Desulfurococcaceae.Ignicoccus.hospitalis.KIN4_I 640753029
+Crenarchaeota.Thermoprotei.Desulfurococcales.Desulfurococcaceae.Ignisphaera.aggregans.DSM_17230 648028035
+Crenarchaeota.Thermoprotei.Desulfurococcales.Desulfurococcaceae.Staphylothermus.hellenicus.DSM_12710 646564573
+Crenarchaeota.Thermoprotei.Desulfurococcales.Desulfurococcaceae.Staphylothermus.marinus.F1 640069332
+Crenarchaeota.Thermoprotei.Desulfurococcales.Desulfurococcaceae.Thermosphaera.aggregans.DSM_11486 646564583
+Crenarchaeota.Thermoprotei.Desulfurococcales.Pyrodictiaceae.Hyperthermus.butylicus.DSM_5456 640069314
+Crenarchaeota.Thermoprotei.Sulfolobales.Sulfolobaceae.Acidianus.hospitalis.W1 650716001
+Crenarchaeota.Thermoprotei.Sulfolobales.Sulfolobaceae.Metallosphaera.cuprina.Ar_4 650716051
+Crenarchaeota.Thermoprotei.Sulfolobales.Sulfolobaceae.Metallosphaera.sedula.DSM_5348 640427120
+Crenarchaeota.Thermoprotei.Sulfolobales.Sulfolobaceae.Sulfolobus.acidocaldarius.DSM_639 638154517
+Crenarchaeota.Thermoprotei.Sulfolobales.Sulfolobaceae.Sulfolobus.islandicus.HVE10_4 650377981
+Crenarchaeota.Thermoprotei.Sulfolobales.Sulfolobaceae.Sulfolobus.islandicus.L_D_8_5 646311959
+Crenarchaeota.Thermoprotei.Sulfolobales.Sulfolobaceae.Sulfolobus.islandicus.L_S_2_15 643692044
+Crenarchaeota.Thermoprotei.Sulfolobales.Sulfolobaceae.Sulfolobus.islandicus.M_14_25 643692045
+Crenarchaeota.Thermoprotei.Sulfolobales.Sulfolobaceae.Sulfolobus.islandicus.M_16_27 643692046
+Crenarchaeota.Thermoprotei.Sulfolobales.Sulfolobaceae.Sulfolobus.islandicus.M_16_4 643692047
+Crenarchaeota.Thermoprotei.Sulfolobales.Sulfolobaceae.Sulfolobus.islandicus.REY15A 650377982
+Crenarchaeota.Thermoprotei.Sulfolobales.Sulfolobaceae.Sulfolobus.islandicus.Y_G_57_14 643692048
+Crenarchaeota.Thermoprotei.Sulfolobales.Sulfolobaceae.Sulfolobus.islandicus.Y_N_15_51 643692049
+Crenarchaeota.Thermoprotei.Sulfolobales.Sulfolobaceae.Sulfolobus.solfataricus.98_2 646862347
+Crenarchaeota.Thermoprotei.Sulfolobales.Sulfolobaceae.Sulfolobus.solfataricus.98_2 649990020
+Crenarchaeota.Thermoprotei.Sulfolobales.Sulfolobaceae.Sulfolobus.solfataricus.P2 638154518
+Crenarchaeota.Thermoprotei.Sulfolobales.Sulfolobaceae.Sulfolobus.tokodaii.str__7 638154519
+Crenarchaeota.Thermoprotei.Thermoproteales.Thermofilaceae.Thermofilum.pendens.Hrk_5 639633064
+Crenarchaeota.Thermoprotei.Thermoproteales.Thermoproteaceae.Caldivirga.maquilingensis.IC_167 641228483
+Crenarchaeota.Thermoprotei.Thermoproteales.Thermoproteaceae.Pyrobaculum.aerophilum.str__IM2 638154513
+Crenarchaeota.Thermoprotei.Thermoproteales.Thermoproteaceae.Pyrobaculum.arsenaticum.DSM_13514 640427135
+Crenarchaeota.Thermoprotei.Thermoproteales.Thermoproteaceae.Pyrobaculum.calidifontis.JCM_11548 640069326
+Crenarchaeota.Thermoprotei.Thermoproteales.Thermoproteaceae.Pyrobaculum.islandicum.DSM_4184 639633053
+Crenarchaeota.Thermoprotei.Thermoproteales.Thermoproteaceae.Thermoproteus.neutrophilus.V24Sta 641522657
+Crenarchaeota.Thermoprotei.Thermoproteales.Thermoproteaceae.Thermoproteus.uzoniensis.768_20 650716098
+Crenarchaeota.Thermoprotei.Thermoproteales.Thermoproteaceae.Vulcanisaeta.distributa.DSM_14429 648028062
+Crenarchaeota.Thermoprotei.Thermoproteales.Thermoproteaceae.Vulcanisaeta.moutnovskia.768_28 650377985
+Euryarchaeota.Archaeoglobi.Archaeoglobales.Archaeoglobaceae.Archaeoglobus.fulgidus.DSM_4304 638154502
+Euryarchaeota.Archaeoglobi.Archaeoglobales.Archaeoglobaceae.Archaeoglobus.profundus.DSM_5631 646311906
+Euryarchaeota.Archaeoglobi.Archaeoglobales.Archaeoglobaceae.Ferroglobus.placidus.DSM_10642 646564534
+Euryarchaeota.Halobacteria.Halobacteriales.Haloarculaceae.Haloarcula.marismortui.ATCC_43049 638154503
+Euryarchaeota.Halobacteria.Halobacteriales.Halobacteriaceae.Haladaptatus.paucihalophilus.DX253 649989953
+Euryarchaeota.Halobacteria.Halobacteriales.Halobacteriaceae.Halalkalicoccus.jeotgali.B3 648028029
+Euryarchaeota.Halobacteria.Halobacteriales.Halobacteriaceae.Halobacterium.salinarum.R1 641522631
+Euryarchaeota.Halobacteria.Halobacteriales.Halobacteriaceae.Halobacterium.sp_.NRC_1 638154504
+Euryarchaeota.Halobacteria.Halobacteriales.Halobacteriaceae.Haloferax.volcanii.DS2 646564536
+Euryarchaeota.Halobacteria.Halobacteriales.Halobacteriaceae.Halogeometricum.borinquense.DSM_11551 649633053
+Euryarchaeota.Halobacteria.Halobacteriales.Halobacteriaceae.Halomicrobium.mukohataei.DSM_12286 644736372
+Euryarchaeota.Halobacteria.Halobacteriales.Halobacteriaceae.Haloquadratum.walsbyi.C23 651053028
+Euryarchaeota.Halobacteria.Halobacteriales.Halobacteriaceae.Haloquadratum.walsbyi.DSM_16790 637000129
+Euryarchaeota.Halobacteria.Halobacteriales.Halobacteriaceae.Halorhabdus.tiamatea.SARL4B 651324042
+Euryarchaeota.Halobacteria.Halobacteriales.Halobacteriaceae.Halorhabdus.utahensis.DSM_12940 644736373
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+Euryarchaeota.Halobacteria.Halobacteriales.Halobacteriaceae.Haloterrigena.turkmenica.DSM_5511 646311934
+Euryarchaeota.Halobacteria.Halobacteriales.Halobacteriaceae.Natrialba.magadii.ATCC_43099 646564555
+Euryarchaeota.Halobacteria.Halobacteriales.Halobacteriaceae.Natronomonas.pharaonis.DSM_2160 637000187
+Euryarchaeota.Methanobacteria.Methanobacteriales.Methanobacteriaceae.Methanobacterium.sp_.AL_21 650716052
+Euryarchaeota.Methanobacteria.Methanobacteriales.Methanobacteriaceae.Methanobacterium.sp_.SWAN_1 650716053
+Euryarchaeota.Methanobacteria.Methanobacteriales.Methanobacteriaceae.Methanobrevibacter.ruminantium.M1 646311943
+Euryarchaeota.Methanobacteria.Methanobacteriales.Methanobacteriaceae.Methanobrevibacter.smithii.ATCC_35061 640427121
+Euryarchaeota.Methanobacteria.Methanobacteriales.Methanobacteriaceae.Methanobrevibacter.smithii.DSM_2374 643886215
+Euryarchaeota.Methanobacteria.Methanobacteriales.Methanobacteriaceae.Methanobrevibacter.smithii.DSM_2375 643886144
+Euryarchaeota.Methanobacteria.Methanobacteriales.Methanobacteriaceae.Methanosphaera.stadtmanae.DSM_3091 637000163
+Euryarchaeota.Methanobacteria.Methanobacteriales.Methanobacteriaceae.Methanothermobacter.marburgensis.str__Marburg 648028041
+Euryarchaeota.Methanobacteria.Methanobacteriales.Methanobacteriaceae.Methanothermobacter.thermautotrophicus.str__Delta_H 638154510
+Euryarchaeota.Methanobacteria.Methanobacteriales.Methanothermaceae.Methanothermus.fervidus.DSM_2088 649633067
+Euryarchaeota.Methanococci.Methanococcales.Methanocaldococcaceae.Methanocaldococcus.fervens.AG86 644736385
+Euryarchaeota.Methanococci.Methanococcales.Methanocaldococcaceae.Methanocaldococcus.infernus.ME 646564547
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+Euryarchaeota.Methanococci.Methanococcales.Methanocaldococcaceae.Methanocaldococcus.vulcanius.M7 646311944
+Euryarchaeota.Methanococci.Methanococcales.Methanocaldococcaceae.Methanotorris.igneus.Kol_5 650716056
+Euryarchaeota.Methanococci.Methanococcales.Methanococcaceae.Methanococcus.aeolicus.Nankai_3 640753034
+Euryarchaeota.Methanococci.Methanococcales.Methanococcaceae.Methanococcus.maripaludis.C5 640069316
+Euryarchaeota.Methanococci.Methanococcales.Methanococcaceae.Methanococcus.maripaludis.C6 641228496
+Euryarchaeota.Methanococci.Methanococcales.Methanococcaceae.Methanococcus.maripaludis.C7 640753035
+Euryarchaeota.Methanococci.Methanococcales.Methanococcaceae.Methanococcus.maripaludis.S2 638154506
+Euryarchaeota.Methanococci.Methanococcales.Methanococcaceae.Methanococcus.vannielii.SB 640753036
+Euryarchaeota.Methanococci.Methanococcales.Methanococcaceae.Methanococcus.voltae.A3 646564549
+Euryarchaeota.Methanococci.Methanococcales.Methanococcaceae.Methanothermococcus.okinawensis.IH1 650716055
+Euryarchaeota.Methanomicrobia.Methanocellales.Methanocellaceae.Methanocella.paludicola.SANAE 646311945
+Euryarchaeota.Methanomicrobia.Methanocellales.Methanocellaceae.Methanocella.sp_.archaeon_RC_I 640427153
+Euryarchaeota.Methanomicrobia.Methanomicrobiales.Methanocorpusculaceae.Methanocorpusculum.labreanum.Z 640069317
+Euryarchaeota.Methanomicrobia.Methanomicrobiales.Methanocullaceae.Methanoculleus.marisnigri.JR1 640069318
+Euryarchaeota.Methanomicrobia.Methanomicrobiales.Methanomicrobiaceae.Methanoplanus.petrolearius.DSM_11571 648028040
+Euryarchaeota.Methanomicrobia.Methanomicrobiales.Methanoregulaceae.Methanoregula.boonei.boonei_6A8 640753014
+Euryarchaeota.Methanomicrobia.Methanomicrobiales.Methanoregulaceae.Methanosphaerula.Methanosphaerula.palustris_E1_9c 643348525
+Euryarchaeota.Methanomicrobia.Methanomicrobiales.Methanospirillaceae.Methanospirillum.hungatei.JF_1 637000164
+Euryarchaeota.Methanomicrobia.Methanosarcinales.Methanosaetaceae.Methanosaeta.concilii.GP6 650716054
+Euryarchaeota.Methanomicrobia.Methanosarcinales.Methanosaetaceae.Methanosaeta.thermophila.PT 639633038
+Euryarchaeota.Methanomicrobia.Methanosarcinales.Methanosarcinaceae.Methanococcoides.burtonii.DSM_6242 637000161
+Euryarchaeota.Methanomicrobia.Methanosarcinales.Methanosarcinaceae.Methanohalobium.evestigatum.Z_7303 648028039
+Euryarchaeota.Methanomicrobia.Methanosarcinales.Methanosarcinaceae.Methanohalophilus.mahii.DSM_5219 646564550
+Euryarchaeota.Methanomicrobia.Methanosarcinales.Methanosarcinaceae.Methanosarcina.acetivorans.C2A 638154508
+Euryarchaeota.Methanomicrobia.Methanosarcinales.Methanosarcinaceae.Methanosarcina.barkeri.str__fusaro 637000162
+Euryarchaeota.Methanomicrobia.Methanosarcinales.Methanosarcinaceae.Methanosarcina.mazei.Go1 638154509
+Euryarchaeota.Methanopyri.Methanopyrales.Methanopyraceae.Methanopyrus.kandleri.AV19 638154507
+Euryarchaeota.Thermococci.Thermococcales.Thermococcaceae.Pyrococcus.abyssi.GE5 638154514
+Euryarchaeota.Thermococci.Thermococcales.Thermococcaceae.Pyrococcus.furiosus.DSM_3638 638154515
+Euryarchaeota.Thermococci.Thermococcales.Thermococcaceae.Pyrococcus.horikoshii.OT3 638154516
+Euryarchaeota.Thermococci.Thermococcales.Thermococcaceae.Pyrococcus.sp_.NA2 650716079
+Euryarchaeota.Thermococci.Thermococcales.Thermococcaceae.Pyrococcus.yayanosii.CH1 650716080
+Euryarchaeota.Thermococci.Thermococcales.Thermococcaceae.Thermococcus.barophilus.MP 650716096
+Euryarchaeota.Thermococci.Thermococcales.Thermococcaceae.Thermococcus.gammatolerans.EJ3 644736411
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+Euryarchaeota.Thermococci.Thermococcales.Thermococcaceae.Thermococcus.sibiricus.MM_739 644736412
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+Euryarchaeota.Thermococci.Thermococcales.Thermococcaceae.Thermococcus.sp_.AM4 647533240
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+Euryarchaeota.Thermoplasmata.Thermoplasmatales.Thermoplasmataceae.Thermoplasma.volcanium.GSS1 638154522
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diff --git a/examples/archaea/run.sh b/examples/archaea/run.sh
new file mode 100755
index 0000000..40bfff9
--- /dev/null
+++ b/examples/archaea/run.sh
@@ -0,0 +1,3 @@
+#!/bin/sh
+graphlan_annotate.py archaea.txt archaea.annot.xml --annot annot.txt
+graphlan.py archaea.annot.xml archaea.png --dpi 150 --pad 0
diff --git a/examples/guide/annot_0.txt b/examples/guide/annot_0.txt
new file mode 100644
index 0000000..ba9e793
--- /dev/null
+++ b/examples/guide/annot_0.txt
@@ -0,0 +1,7 @@
+clade_separation 0.5
+branch_thickness 1.5
+branch_bracket_depth 0.8
+branch_bracket_width 0.25
+clade_marker_size 40
+clade_marker_edge_color #555555
+clade_marker_edge_width 1.2
diff --git a/examples/guide/annot_1.txt b/examples/guide/annot_1.txt
new file mode 100644
index 0000000..2b0d6a2
--- /dev/null
+++ b/examples/guide/annot_1.txt
@@ -0,0 +1,41 @@
+Banthracis clade_marker_color b
+Banthracis clade_marker_size 80
+Saureus clade_marker_color r
+Saureus clade_marker_size 125
+Bacillus clade_marker_color b
+Bacillus clade_marker_size 120
+Bacillus clade_marker_shape h
+Pcurdlanolyticus clade_marker_color #20DD20
+Plarvae clade_marker_color #008000
+Pmucilaginosus clade_marker_color #057005
+Ppolymyxa clade_marker_color #009020
+Pvortex clade_marker_color #00AA00
+Bacillaceae clade_marker_shape *
+Bacillaceae clade_marker_size 130
+Bacillaceae clade_marker_color b
+Listeriaceae clade_marker_shape *
+Listeriaceae clade_marker_size 130
+Paenibacillaceae clade_marker_shape *
+Paenibacillaceae clade_marker_size 130
+Paenibacillaceae clade_marker_color g
+Staphylococcaceae clade_marker_shape *
+Staphylococcaceae clade_marker_size 130
+Staphylococcaceae clade_marker_color r
+Batrophaeus clade_marker_size 12
+Bcellulosilyticus clade_marker_size 8
+Bcereus clade_marker_size 3
+Scarnosus clade_marker_size 75
+Plarvae clade_marker_size 89
+Bpumilus clade_marker_size 50
+Bsubtilis clade_marker_size 65
+Bthuringiensis clade_marker_size 10
+Cthermarum clade_marker_size 15
+Bmegaterium clade_marker_size 12
+Lfusiformis clade_marker_size 174
+Oiheyensis clade_marker_size 95
+Scapitis clade_marker_size 36
+Shaemolyticus clade_marker_size 64
+Ppolymyxa clade_marker_size 20
+Pvortex clade_marker_size 19
+Swarneri clade_marker_size 33
+Spseudintermedius clade_marker_size 19
diff --git a/examples/guide/annot_2.txt b/examples/guide/annot_2.txt
new file mode 100644
index 0000000..c8839f0
--- /dev/null
+++ b/examples/guide/annot_2.txt
@@ -0,0 +1,24 @@
+Bacillus annotation Bacillus
+Bacillaceae annotation Bacillaceae
+Bacillus annotation_background_color b
+Bacillaceae annotation_background_color b
+Paenibacillaceae annotation Paenibacillaceae
+Paenibacillaceae annotation_background_color g
+Staphylococcus annotation Staphylococcus
+Staphylococcus annotation_background_color r
+Saureus annotation S. aureus
+Saureus annotation_background_color r
+Paenibacillus annotation Paenibacillus
+Paenibacillus annotation_background_color g
+Staphylococcaceae annotation Staphylococcaceae
+Staphylococcaceae annotation_background_color r
+Brevibacillus annotation Brevibacillus
+Brevibacillus annotation_background_color g
+Bbrevis annotation a:Brevibacillus brevis
+Bbrevis annotation_background_color g
+Blaterosporus annotation b:Brevibacillus laterosporus
+Blaterosporus annotation_background_color g
+Banthracis annotation Bacillus anthracis
+Banthracis annotation_background_color b
+Bsubtilis annotation Bacillus subtilis
+Bsubtilis annotation_background_color b
diff --git a/examples/guide/annot_3.txt b/examples/guide/annot_3.txt
new file mode 100644
index 0000000..6a2d073
--- /dev/null
+++ b/examples/guide/annot_3.txt
@@ -0,0 +1,429 @@
+ring_internal_separator_thickness 1 0.5
+ring_internal_separator_thickness 2 1.0
+ring_internal_separator_thickness 3 0.5
+ring_internal_separator_thickness 4 0.5
+ring_internal_separator_thickness 5 1.0
+ring_width 1 0.5
+ring_height 1 0.75
+ring_width 5 0.5
+Bacillaceae.Anoxybacillus.Aflavithermus ring_shape 1 v
+Bacillaceae.Bacillus.Bamyloliquefaciens ring_shape 1 v
+Bacillaceae.Bacillus.Banthracis ring_shape 1 ^
+Bacillaceae.Bacillus.Batrophaeus ring_shape 1 v
+Bacillaceae.Bacillus.Bcellulosilyticus ring_shape 1 ^
+Bacillaceae.Bacillus.Bcereus ring_shape 1 ^
+Bacillaceae.Bacillus.Bclausii ring_shape 1 ^
+Bacillaceae.Bacillus.Bcoagulans ring_shape 1 v
+Bacillaceae.Bacillus.Bcoahuilensis ring_shape 1 ^
+Bacillaceae.Bacillus.Bhalodurans ring_shape 1 v
+Bacillaceae.Bacillus.Blicheniformis ring_shape 1 ^
+Bacillaceae.Bacillus.Bmegaterium ring_shape 1 v
+Bacillaceae.Bacillus.Bmycoides ring_shape 1 v
+Bacillaceae.Bacillus.Bpseudofirmus ring_shape 1 ^
+Bacillaceae.Bacillus.Bpseudomycoides ring_shape 1 v
+Bacillaceae.Bacillus.Bpumilus ring_shape 1 v
+Bacillaceae.Bacillus.Bselenitireducens ring_shape 1 ^
+Bacillaceae.Bacillus.Bsubtilis ring_shape 1 v
+Bacillaceae.Bacillus.Bthuringiensis ring_shape 1 ^
+Bacillaceae.Bacillus.Bweihenstephanensis ring_shape 1 ^
+Bacillaceae.Caldalkalibacillus.Cthermarum ring_shape 1 ^
+Bacillaceae.Geobacillus.Gkaustophilus ring_shape 1 v
+Bacillaceae.Geobacillus.Gthermodenitrificans ring_shape 1 ^
+Bacillaceae.Geobacillus.Gthermoglucosidasius ring_shape 1 v
+Bacillaceae.Lysinibacillus.Lfusiformis ring_shape 1 v
+Bacillaceae.Lysinibacillus.Lsphaericus ring_shape 1 ^
+Bacillaceae.Oceanobacillus.Oiheyensis ring_shape 1 v
+Listeriaceae.Listeria.Lgrayi ring_shape 1 v
+Listeriaceae.Listeria.Linnocua ring_shape 1 ^
+Listeriaceae.Listeria.Lmonocytogenes ring_shape 1 ^
+Listeriaceae.Listeria.Lseeligeri ring_shape 1 v
+Listeriaceae.Listeria.Lwelshimeri ring_shape 1 ^
+Paenibacillaceae.Brevibacillus.Bbrevis ring_shape 1 v
+Paenibacillaceae.Brevibacillus.Blaterosporus ring_shape 1 ^
+Paenibacillaceae.Paenibacillus.Pcurdlanolyticus ring_shape 1 v
+Paenibacillaceae.Paenibacillus.Plarvae ring_shape 1 v
+Paenibacillaceae.Paenibacillus.Pmucilaginosus ring_shape 1 v
+Paenibacillaceae.Paenibacillus.Ppolymyxa ring_shape 1 v
+Paenibacillaceae.Paenibacillus.Pvortex ring_shape 1 ^
+Staphylococcaceae.Macrococcus.Mcaseolyticus ring_shape 1 ^
+Staphylococcaceae.Staphylococcus.Saureus ring_shape 1 ^
+Staphylococcaceae.Staphylococcus.Scapitis ring_shape 1 ^
+Staphylococcaceae.Staphylococcus.Scaprae ring_shape 1 v
+Staphylococcaceae.Staphylococcus.Scarnosus ring_shape 1 v
+Staphylococcaceae.Staphylococcus.Sepidermidis ring_shape 1 v
+Staphylococcaceae.Staphylococcus.Shaemolyticus ring_shape 1 ^
+Staphylococcaceae.Staphylococcus.Shominis ring_shape 1 ^
+Staphylococcaceae.Staphylococcus.Slugdunensis ring_shape 1 v
+Staphylococcaceae.Staphylococcus.Spseudintermedius ring_shape 1 ^
+Staphylococcaceae.Staphylococcus.Ssaprophyticus ring_shape 1 v
+Staphylococcaceae.Staphylococcus.Swarneri ring_shape 1 ^
+Bacillaceae.Anoxybacillus.Aflavithermus ring_alpha 2 0.423462136478
+Bacillaceae.Bacillus.Bamyloliquefaciens ring_alpha 2 0.328914114867
+Bacillaceae.Bacillus.Banthracis ring_alpha 2 0.699584495953
+Bacillaceae.Bacillus.Batrophaeus ring_alpha 2 0.914291471541
+Bacillaceae.Bacillus.Bcellulosilyticus ring_alpha 2 0.777833777684
+Bacillaceae.Bacillus.Bcereus ring_alpha 2 0.594773291359
+Bacillaceae.Bacillus.Bclausii ring_alpha 2 0.444201154337
+Bacillaceae.Bacillus.Bcoagulans ring_alpha 2 0.85140222384
+Bacillaceae.Bacillus.Bcoahuilensis ring_alpha 2 0.445070000889
+Bacillaceae.Bacillus.Bhalodurans ring_alpha 2 0.436455399115
+Bacillaceae.Bacillus.Blicheniformis ring_alpha 2 0.570138625829
+Bacillaceae.Bacillus.Bmegaterium ring_alpha 2 0.331044708077
+Bacillaceae.Bacillus.Bmycoides ring_alpha 2 0.134087953967
+Bacillaceae.Bacillus.Bpseudofirmus ring_alpha 2 0.959809786409
+Bacillaceae.Bacillus.Bpseudomycoides ring_alpha 2 0.322425841569
+Bacillaceae.Bacillus.Bpumilus ring_alpha 2 0.6310797781
+Bacillaceae.Bacillus.Bselenitireducens ring_alpha 2 0.0999247790029
+Bacillaceae.Bacillus.Bsubtilis ring_alpha 2 0.0291140916975
+Bacillaceae.Bacillus.Bthuringiensis ring_alpha 2 0.291201092034
+Bacillaceae.Bacillus.Bweihenstephanensis ring_alpha 2 0.298583691605
+Bacillaceae.Caldalkalibacillus.Cthermarum ring_alpha 2 0.0534558636274
+Bacillaceae.Geobacillus.Gkaustophilus ring_alpha 2 0.0878700889869
+Bacillaceae.Geobacillus.Gthermodenitrificans ring_alpha 2 0.914114387261
+Bacillaceae.Geobacillus.Gthermoglucosidasius ring_alpha 2 0.161880353101
+Bacillaceae.Lysinibacillus.Lfusiformis ring_alpha 2 0.730306130149
+Bacillaceae.Lysinibacillus.Lsphaericus ring_alpha 2 0.334890327634
+Bacillaceae.Oceanobacillus.Oiheyensis ring_alpha 2 0.218075337012
+Listeriaceae.Listeria.Lgrayi ring_alpha 2 0.447942203556
+Listeriaceae.Listeria.Linnocua ring_alpha 2 0.143522097769
+Listeriaceae.Listeria.Lmonocytogenes ring_alpha 2 0.324901346814
+Listeriaceae.Listeria.Lseeligeri ring_alpha 2 0.721461557745
+Listeriaceae.Listeria.Lwelshimeri ring_alpha 2 0.603871257827
+Paenibacillaceae.Brevibacillus.Bbrevis ring_alpha 2 0.536829482998
+Paenibacillaceae.Brevibacillus.Blaterosporus ring_alpha 2 0.75932144025
+Paenibacillaceae.Paenibacillus.Pcurdlanolyticus ring_alpha 2 0.904283082241
+Paenibacillaceae.Paenibacillus.Plarvae ring_alpha 2 0.253696705619
+Paenibacillaceae.Paenibacillus.Pmucilaginosus ring_alpha 2 0.820910759872
+Paenibacillaceae.Paenibacillus.Ppolymyxa ring_alpha 2 0.783643352935
+Paenibacillaceae.Paenibacillus.Pvortex ring_alpha 2 0.781101978268
+Staphylococcaceae.Macrococcus.Mcaseolyticus ring_alpha 2 0.597634927522
+Staphylococcaceae.Staphylococcus.Saureus ring_alpha 2 0.639595480173
+Staphylococcaceae.Staphylococcus.Scapitis ring_alpha 2 0.326481586152
+Staphylococcaceae.Staphylococcus.Scaprae ring_alpha 2 0.48661102115
+Staphylococcaceae.Staphylococcus.Scarnosus ring_alpha 2 0.757163548806
+Staphylococcaceae.Staphylococcus.Sepidermidis ring_alpha 2 0.899268566505
+Staphylococcaceae.Staphylococcus.Shaemolyticus ring_alpha 2 0.895335711479
+Staphylococcaceae.Staphylococcus.Shominis ring_alpha 2 0.272427614396
+Staphylococcaceae.Staphylococcus.Slugdunensis ring_alpha 2 0.710528488721
+Staphylococcaceae.Staphylococcus.Spseudintermedius ring_alpha 2 0.24185085998
+Staphylococcaceae.Staphylococcus.Ssaprophyticus ring_alpha 2 0.0895481129751
+Staphylococcaceae.Staphylococcus.Swarneri ring_alpha 2 0.00539683704551
+Bacillaceae.Anoxybacillus.Aflavithermus ring_color 2 #AAAA00
+Bacillaceae.Bacillus.Bamyloliquefaciens ring_color 2 #AAAA00
+Bacillaceae.Bacillus.Banthracis ring_color 2 #AAAA00
+Bacillaceae.Bacillus.Batrophaeus ring_color 2 #AAAA00
+Bacillaceae.Bacillus.Bcellulosilyticus ring_color 2 #AAAA00
+Bacillaceae.Bacillus.Bcereus ring_color 2 #AAAA00
+Bacillaceae.Bacillus.Bclausii ring_color 2 #AAAA00
+Bacillaceae.Bacillus.Bcoagulans ring_color 2 #AAAA00
+Bacillaceae.Bacillus.Bcoahuilensis ring_color 2 #AAAA00
+Bacillaceae.Bacillus.Bhalodurans ring_color 2 #AAAA00
+Bacillaceae.Bacillus.Blicheniformis ring_color 2 #AAAA00
+Bacillaceae.Bacillus.Bmegaterium ring_color 2 #AAAA00
+Bacillaceae.Bacillus.Bmycoides ring_color 2 #AAAA00
+Bacillaceae.Bacillus.Bpseudofirmus ring_color 2 #AAAA00
+Bacillaceae.Bacillus.Bpseudomycoides ring_color 2 #AAAA00
+Bacillaceae.Bacillus.Bpumilus ring_color 2 #AAAA00
+Bacillaceae.Bacillus.Bselenitireducens ring_color 2 #AAAA00
+Bacillaceae.Bacillus.Bsubtilis ring_color 2 #AAAA00
+Bacillaceae.Bacillus.Bthuringiensis ring_color 2 #AAAA00
+Bacillaceae.Bacillus.Bweihenstephanensis ring_color 2 #AAAA00
+Bacillaceae.Caldalkalibacillus.Cthermarum ring_color 2 #AAAA00
+Bacillaceae.Geobacillus.Gkaustophilus ring_color 2 #AAAA00
+Bacillaceae.Geobacillus.Gthermodenitrificans ring_color 2 #AAAA00
+Bacillaceae.Geobacillus.Gthermoglucosidasius ring_color 2 #AAAA00
+Bacillaceae.Lysinibacillus.Lfusiformis ring_color 2 #AAAA00
+Bacillaceae.Lysinibacillus.Lsphaericus ring_color 2 #AAAA00
+Bacillaceae.Oceanobacillus.Oiheyensis ring_color 2 #AAAA00
+Listeriaceae.Listeria.Lgrayi ring_color 2 #AAAA00
+Listeriaceae.Listeria.Linnocua ring_color 2 #AAAA00
+Listeriaceae.Listeria.Lmonocytogenes ring_color 2 #AAAA00
+Listeriaceae.Listeria.Lseeligeri ring_color 2 #AAAA00
+Listeriaceae.Listeria.Lwelshimeri ring_color 2 #AAAA00
+Paenibacillaceae.Brevibacillus.Bbrevis ring_color 2 #AAAA00
+Paenibacillaceae.Brevibacillus.Blaterosporus ring_color 2 #AAAA00
+Paenibacillaceae.Paenibacillus.Pcurdlanolyticus ring_color 2 #AAAA00
+Paenibacillaceae.Paenibacillus.Plarvae ring_color 2 #AAAA00
+Paenibacillaceae.Paenibacillus.Pmucilaginosus ring_color 2 #AAAA00
+Paenibacillaceae.Paenibacillus.Ppolymyxa ring_color 2 #AAAA00
+Paenibacillaceae.Paenibacillus.Pvortex ring_color 2 #AAAA00
+Staphylococcaceae.Macrococcus.Mcaseolyticus ring_color 2 #AAAA00
+Staphylococcaceae.Staphylococcus.Saureus ring_color 2 #AAAA00
+Staphylococcaceae.Staphylococcus.Scapitis ring_color 2 #AAAA00
+Staphylococcaceae.Staphylococcus.Scaprae ring_color 2 #AAAA00
+Staphylococcaceae.Staphylococcus.Scarnosus ring_color 2 #AAAA00
+Staphylococcaceae.Staphylococcus.Sepidermidis ring_color 2 #AAAA00
+Staphylococcaceae.Staphylococcus.Shaemolyticus ring_color 2 #AAAA00
+Staphylococcaceae.Staphylococcus.Shominis ring_color 2 #AAAA00
+Staphylococcaceae.Staphylococcus.Slugdunensis ring_color 2 #AAAA00
+Staphylococcaceae.Staphylococcus.Spseudintermedius ring_color 2 #AAAA00
+Staphylococcaceae.Staphylococcus.Ssaprophyticus ring_color 2 #AAAA00
+Staphylococcaceae.Staphylococcus.Swarneri ring_color 2 #AAAA00
+Bacillaceae.Anoxybacillus.Aflavithermus ring_alpha 3 0.486328798075
+Bacillaceae.Bacillus.Bamyloliquefaciens ring_alpha 3 0.902536860011
+Bacillaceae.Bacillus.Banthracis ring_alpha 3 0.540967223446
+Bacillaceae.Bacillus.Batrophaeus ring_alpha 3 0.514745187899
+Bacillaceae.Bacillus.Bcellulosilyticus ring_alpha 3 0.808744341053
+Bacillaceae.Bacillus.Bcereus ring_alpha 3 0.174551783411
+Bacillaceae.Bacillus.Bclausii ring_alpha 3 0.355096857237
+Bacillaceae.Bacillus.Bcoagulans ring_alpha 3 0.30812498305
+Bacillaceae.Bacillus.Bcoahuilensis ring_alpha 3 0.899878301907
+Bacillaceae.Bacillus.Bhalodurans ring_alpha 3 0.135096627341
+Bacillaceae.Bacillus.Blicheniformis ring_alpha 3 0.114946401925
+Bacillaceae.Bacillus.Bmegaterium ring_alpha 3 0.112857448
+Bacillaceae.Bacillus.Bmycoides ring_alpha 3 0.216895687759
+Bacillaceae.Bacillus.Bpseudofirmus ring_alpha 3 0.728546119267
+Bacillaceae.Bacillus.Bpseudomycoides ring_alpha 3 0.862047963812
+Bacillaceae.Bacillus.Bpumilus ring_alpha 3 0.285139149368
+Bacillaceae.Bacillus.Bselenitireducens ring_alpha 3 0.809501074306
+Bacillaceae.Bacillus.Bsubtilis ring_alpha 3 0.261975858288
+Bacillaceae.Bacillus.Bthuringiensis ring_alpha 3 0.887622203873
+Bacillaceae.Bacillus.Bweihenstephanensis ring_alpha 3 0.964470847643
+Bacillaceae.Caldalkalibacillus.Cthermarum ring_alpha 3 0.00503110917306
+Bacillaceae.Geobacillus.Gkaustophilus ring_alpha 3 0.255498806201
+Bacillaceae.Geobacillus.Gthermodenitrificans ring_alpha 3 0.617424889313
+Bacillaceae.Geobacillus.Gthermoglucosidasius ring_alpha 3 0.378606726256
+Bacillaceae.Lysinibacillus.Lfusiformis ring_alpha 3 0.997919879844
+Bacillaceae.Lysinibacillus.Lsphaericus ring_alpha 3 0.707008809187
+Bacillaceae.Oceanobacillus.Oiheyensis ring_alpha 3 0.479214513601
+Listeriaceae.Listeria.Lgrayi ring_alpha 3 0.204916577728
+Listeriaceae.Listeria.Linnocua ring_alpha 3 0.622910173385
+Listeriaceae.Listeria.Lmonocytogenes ring_alpha 3 0.952569768174
+Listeriaceae.Listeria.Lseeligeri ring_alpha 3 0.354875635794
+Listeriaceae.Listeria.Lwelshimeri ring_alpha 3 0.692837888937
+Paenibacillaceae.Brevibacillus.Bbrevis ring_alpha 3 0.580492537793
+Paenibacillaceae.Brevibacillus.Blaterosporus ring_alpha 3 0.67891660613
+Paenibacillaceae.Paenibacillus.Pcurdlanolyticus ring_alpha 3 0.0180110682393
+Paenibacillaceae.Paenibacillus.Plarvae ring_alpha 3 0.953608677163
+Paenibacillaceae.Paenibacillus.Pmucilaginosus ring_alpha 3 0.358675673023
+Paenibacillaceae.Paenibacillus.Ppolymyxa ring_alpha 3 0.486438688396
+Paenibacillaceae.Paenibacillus.Pvortex ring_alpha 3 0.186068756014
+Staphylococcaceae.Macrococcus.Mcaseolyticus ring_alpha 3 0.725693055143
+Staphylococcaceae.Staphylococcus.Saureus ring_alpha 3 0.374342186447
+Staphylococcaceae.Staphylococcus.Scapitis ring_alpha 3 0.510175055083
+Staphylococcaceae.Staphylococcus.Scaprae ring_alpha 3 0.948314742048
+Staphylococcaceae.Staphylococcus.Scarnosus ring_alpha 3 0.935701022727
+Staphylococcaceae.Staphylococcus.Sepidermidis ring_alpha 3 0.0938645581046
+Staphylococcaceae.Staphylococcus.Shaemolyticus ring_alpha 3 0.728085338534
+Staphylococcaceae.Staphylococcus.Shominis ring_alpha 3 0.741611869641
+Staphylococcaceae.Staphylococcus.Slugdunensis ring_alpha 3 0.969166259753
+Staphylococcaceae.Staphylococcus.Spseudintermedius ring_alpha 3 0.437648811318
+Staphylococcaceae.Staphylococcus.Ssaprophyticus ring_alpha 3 0.781992078475
+Staphylococcaceae.Staphylococcus.Swarneri ring_alpha 3 0.867129362962
+Bacillaceae.Anoxybacillus.Aflavithermus ring_color 3 #AA00AA
+Bacillaceae.Bacillus.Bamyloliquefaciens ring_color 3 #AA00AA
+Bacillaceae.Bacillus.Banthracis ring_color 3 #AA00AA
+Bacillaceae.Bacillus.Batrophaeus ring_color 3 #AA00AA
+Bacillaceae.Bacillus.Bcellulosilyticus ring_color 3 #AA00AA
+Bacillaceae.Bacillus.Bcereus ring_color 3 #AA00AA
+Bacillaceae.Bacillus.Bclausii ring_color 3 #AA00AA
+Bacillaceae.Bacillus.Bcoagulans ring_color 3 #AA00AA
+Bacillaceae.Bacillus.Bcoahuilensis ring_color 3 #AA00AA
+Bacillaceae.Bacillus.Bhalodurans ring_color 3 #AA00AA
+Bacillaceae.Bacillus.Blicheniformis ring_color 3 #AA00AA
+Bacillaceae.Bacillus.Bmegaterium ring_color 3 #AA00AA
+Bacillaceae.Bacillus.Bmycoides ring_color 3 #AA00AA
+Bacillaceae.Bacillus.Bpseudofirmus ring_color 3 #AA00AA
+Bacillaceae.Bacillus.Bpseudomycoides ring_color 3 #AA00AA
+Bacillaceae.Bacillus.Bpumilus ring_color 3 #AA00AA
+Bacillaceae.Bacillus.Bselenitireducens ring_color 3 #AA00AA
+Bacillaceae.Bacillus.Bsubtilis ring_color 3 #AA00AA
+Bacillaceae.Bacillus.Bthuringiensis ring_color 3 #AA00AA
+Bacillaceae.Bacillus.Bweihenstephanensis ring_color 3 #AA00AA
+Bacillaceae.Caldalkalibacillus.Cthermarum ring_color 3 #AA00AA
+Bacillaceae.Geobacillus.Gkaustophilus ring_color 3 #AA00AA
+Bacillaceae.Geobacillus.Gthermodenitrificans ring_color 3 #AA00AA
+Bacillaceae.Geobacillus.Gthermoglucosidasius ring_color 3 #AA00AA
+Bacillaceae.Lysinibacillus.Lfusiformis ring_color 3 #AA00AA
+Bacillaceae.Lysinibacillus.Lsphaericus ring_color 3 #AA00AA
+Bacillaceae.Oceanobacillus.Oiheyensis ring_color 3 #AA00AA
+Listeriaceae.Listeria.Lgrayi ring_color 3 #AA00AA
+Listeriaceae.Listeria.Linnocua ring_color 3 #AA00AA
+Listeriaceae.Listeria.Lmonocytogenes ring_color 3 #AA00AA
+Listeriaceae.Listeria.Lseeligeri ring_color 3 #AA00AA
+Listeriaceae.Listeria.Lwelshimeri ring_color 3 #AA00AA
+Paenibacillaceae.Brevibacillus.Bbrevis ring_color 3 #AA00AA
+Paenibacillaceae.Brevibacillus.Blaterosporus ring_color 3 #AA00AA
+Paenibacillaceae.Paenibacillus.Pcurdlanolyticus ring_color 3 #AA00AA
+Paenibacillaceae.Paenibacillus.Plarvae ring_color 3 #AA00AA
+Paenibacillaceae.Paenibacillus.Pmucilaginosus ring_color 3 #AA00AA
+Paenibacillaceae.Paenibacillus.Ppolymyxa ring_color 3 #AA00AA
+Paenibacillaceae.Paenibacillus.Pvortex ring_color 3 #AA00AA
+Staphylococcaceae.Macrococcus.Mcaseolyticus ring_color 3 #AA00AA
+Staphylococcaceae.Staphylococcus.Saureus ring_color 3 #AA00AA
+Staphylococcaceae.Staphylococcus.Scapitis ring_color 3 #AA00AA
+Staphylococcaceae.Staphylococcus.Scaprae ring_color 3 #AA00AA
+Staphylococcaceae.Staphylococcus.Scarnosus ring_color 3 #AA00AA
+Staphylococcaceae.Staphylococcus.Sepidermidis ring_color 3 #AA00AA
+Staphylococcaceae.Staphylococcus.Shaemolyticus ring_color 3 #AA00AA
+Staphylococcaceae.Staphylococcus.Shominis ring_color 3 #AA00AA
+Staphylococcaceae.Staphylococcus.Slugdunensis ring_color 3 #AA00AA
+Staphylococcaceae.Staphylococcus.Spseudintermedius ring_color 3 #AA00AA
+Staphylococcaceae.Staphylococcus.Ssaprophyticus ring_color 3 #AA00AA
+Staphylococcaceae.Staphylococcus.Swarneri ring_color 3 #AA00AA
+Bacillaceae.Anoxybacillus.Aflavithermus ring_alpha 4 0.0164337819514
+Bacillaceae.Bacillus.Bamyloliquefaciens ring_alpha 4 0.961779754562
+Bacillaceae.Bacillus.Banthracis ring_alpha 4 0.0911294036676
+Bacillaceae.Bacillus.Batrophaeus ring_alpha 4 0.214683813052
+Bacillaceae.Bacillus.Bcellulosilyticus ring_alpha 4 0.1835464929
+Bacillaceae.Bacillus.Bcereus ring_alpha 4 0.649839771735
+Bacillaceae.Bacillus.Bclausii ring_alpha 4 0.508572486958
+Bacillaceae.Bacillus.Bcoagulans ring_alpha 4 0.54485221387
+Bacillaceae.Bacillus.Bcoahuilensis ring_alpha 4 0.011849863671
+Bacillaceae.Bacillus.Bhalodurans ring_alpha 4 0.494163373827
+Bacillaceae.Bacillus.Blicheniformis ring_alpha 4 0.0037027183784
+Bacillaceae.Bacillus.Bmegaterium ring_alpha 4 0.944619736609
+Bacillaceae.Bacillus.Bmycoides ring_alpha 4 0.740793384052
+Bacillaceae.Bacillus.Bpseudofirmus ring_alpha 4 0.679054870785
+Bacillaceae.Bacillus.Bpseudomycoides ring_alpha 4 0.65485119746
+Bacillaceae.Bacillus.Bpumilus ring_alpha 4 0.696989248748
+Bacillaceae.Bacillus.Bselenitireducens ring_alpha 4 0.250910763296
+Bacillaceae.Bacillus.Bsubtilis ring_alpha 4 0.603110791976
+Bacillaceae.Bacillus.Bthuringiensis ring_alpha 4 0.768995251147
+Bacillaceae.Bacillus.Bweihenstephanensis ring_alpha 4 0.382492089443
+Bacillaceae.Caldalkalibacillus.Cthermarum ring_alpha 4 0.202515841523
+Bacillaceae.Geobacillus.Gkaustophilus ring_alpha 4 0.604966298977
+Bacillaceae.Geobacillus.Gthermodenitrificans ring_alpha 4 0.271415944271
+Bacillaceae.Geobacillus.Gthermoglucosidasius ring_alpha 4 0.729366061868
+Bacillaceae.Lysinibacillus.Lfusiformis ring_alpha 4 0.281874921267
+Bacillaceae.Lysinibacillus.Lsphaericus ring_alpha 4 0.986149233417
+Bacillaceae.Oceanobacillus.Oiheyensis ring_alpha 4 0.0868426043474
+Listeriaceae.Listeria.Lgrayi ring_alpha 4 0.581618564755
+Listeriaceae.Listeria.Linnocua ring_alpha 4 0.587717564353
+Listeriaceae.Listeria.Lmonocytogenes ring_alpha 4 0.520464993313
+Listeriaceae.Listeria.Lseeligeri ring_alpha 4 0.689907782867
+Listeriaceae.Listeria.Lwelshimeri ring_alpha 4 0.432283970377
+Paenibacillaceae.Brevibacillus.Bbrevis ring_alpha 4 0.713859589198
+Paenibacillaceae.Brevibacillus.Blaterosporus ring_alpha 4 0.91882698904
+Paenibacillaceae.Paenibacillus.Pcurdlanolyticus ring_alpha 4 0.0448745597998
+Paenibacillaceae.Paenibacillus.Plarvae ring_alpha 4 0.702703981052
+Paenibacillaceae.Paenibacillus.Pmucilaginosus ring_alpha 4 0.365023286887
+Paenibacillaceae.Paenibacillus.Ppolymyxa ring_alpha 4 0.73860888919
+Paenibacillaceae.Paenibacillus.Pvortex ring_alpha 4 0.905904555893
+Staphylococcaceae.Macrococcus.Mcaseolyticus ring_alpha 4 0.252754272893
+Staphylococcaceae.Staphylococcus.Saureus ring_alpha 4 0.483919418674
+Staphylococcaceae.Staphylococcus.Scapitis ring_alpha 4 0.652801998863
+Staphylococcaceae.Staphylococcus.Scaprae ring_alpha 4 0.726258452089
+Staphylococcaceae.Staphylococcus.Scarnosus ring_alpha 4 0.833070576852
+Staphylococcaceae.Staphylococcus.Sepidermidis ring_alpha 4 0.645235993575
+Staphylococcaceae.Staphylococcus.Shaemolyticus ring_alpha 4 0.470807178843
+Staphylococcaceae.Staphylococcus.Shominis ring_alpha 4 0.777865349824
+Staphylococcaceae.Staphylococcus.Slugdunensis ring_alpha 4 0.00619809441301
+Staphylococcaceae.Staphylococcus.Spseudintermedius ring_alpha 4 0.652324807659
+Staphylococcaceae.Staphylococcus.Ssaprophyticus ring_alpha 4 0.580610729368
+Staphylococcaceae.Staphylococcus.Swarneri ring_alpha 4 0.243468671906
+Bacillaceae.Anoxybacillus.Aflavithermus ring_color 4 #00AAAA
+Bacillaceae.Bacillus.Bamyloliquefaciens ring_color 4 #00AAAA
+Bacillaceae.Bacillus.Banthracis ring_color 4 #00AAAA
+Bacillaceae.Bacillus.Batrophaeus ring_color 4 #00AAAA
+Bacillaceae.Bacillus.Bcellulosilyticus ring_color 4 #00AAAA
+Bacillaceae.Bacillus.Bcereus ring_color 4 #00AAAA
+Bacillaceae.Bacillus.Bclausii ring_color 4 #00AAAA
+Bacillaceae.Bacillus.Bcoagulans ring_color 4 #00AAAA
+Bacillaceae.Bacillus.Bcoahuilensis ring_color 4 #00AAAA
+Bacillaceae.Bacillus.Bhalodurans ring_color 4 #00AAAA
+Bacillaceae.Bacillus.Blicheniformis ring_color 4 #00AAAA
+Bacillaceae.Bacillus.Bmegaterium ring_color 4 #00AAAA
+Bacillaceae.Bacillus.Bmycoides ring_color 4 #00AAAA
+Bacillaceae.Bacillus.Bpseudofirmus ring_color 4 #00AAAA
+Bacillaceae.Bacillus.Bpseudomycoides ring_color 4 #00AAAA
+Bacillaceae.Bacillus.Bpumilus ring_color 4 #00AAAA
+Bacillaceae.Bacillus.Bselenitireducens ring_color 4 #00AAAA
+Bacillaceae.Bacillus.Bsubtilis ring_color 4 #00AAAA
+Bacillaceae.Bacillus.Bthuringiensis ring_color 4 #00AAAA
+Bacillaceae.Bacillus.Bweihenstephanensis ring_color 4 #00AAAA
+Bacillaceae.Caldalkalibacillus.Cthermarum ring_color 4 #00AAAA
+Bacillaceae.Geobacillus.Gkaustophilus ring_color 4 #00AAAA
+Bacillaceae.Geobacillus.Gthermodenitrificans ring_color 4 #00AAAA
+Bacillaceae.Geobacillus.Gthermoglucosidasius ring_color 4 #00AAAA
+Bacillaceae.Lysinibacillus.Lfusiformis ring_color 4 #00AAAA
+Bacillaceae.Lysinibacillus.Lsphaericus ring_color 4 #00AAAA
+Bacillaceae.Oceanobacillus.Oiheyensis ring_color 4 #00AAAA
+Listeriaceae.Listeria.Lgrayi ring_color 4 #00AAAA
+Listeriaceae.Listeria.Linnocua ring_color 4 #00AAAA
+Listeriaceae.Listeria.Lmonocytogenes ring_color 4 #00AAAA
+Listeriaceae.Listeria.Lseeligeri ring_color 4 #00AAAA
+Listeriaceae.Listeria.Lwelshimeri ring_color 4 #00AAAA
+Paenibacillaceae.Brevibacillus.Bbrevis ring_color 4 #00AAAA
+Paenibacillaceae.Brevibacillus.Blaterosporus ring_color 4 #00AAAA
+Paenibacillaceae.Paenibacillus.Pcurdlanolyticus ring_color 4 #00AAAA
+Paenibacillaceae.Paenibacillus.Plarvae ring_color 4 #00AAAA
+Paenibacillaceae.Paenibacillus.Pmucilaginosus ring_color 4 #00AAAA
+Paenibacillaceae.Paenibacillus.Ppolymyxa ring_color 4 #00AAAA
+Paenibacillaceae.Paenibacillus.Pvortex ring_color 4 #00AAAA
+Staphylococcaceae.Macrococcus.Mcaseolyticus ring_color 4 #00AAAA
+Staphylococcaceae.Staphylococcus.Saureus ring_color 4 #00AAAA
+Staphylococcaceae.Staphylococcus.Scapitis ring_color 4 #00AAAA
+Staphylococcaceae.Staphylococcus.Scaprae ring_color 4 #00AAAA
+Staphylococcaceae.Staphylococcus.Scarnosus ring_color 4 #00AAAA
+Staphylococcaceae.Staphylococcus.Sepidermidis ring_color 4 #00AAAA
+Staphylococcaceae.Staphylococcus.Shaemolyticus ring_color 4 #00AAAA
+Staphylococcaceae.Staphylococcus.Shominis ring_color 4 #00AAAA
+Staphylococcaceae.Staphylococcus.Slugdunensis ring_color 4 #00AAAA
+Staphylococcaceae.Staphylococcus.Spseudintermedius ring_color 4 #00AAAA
+Staphylococcaceae.Staphylococcus.Ssaprophyticus ring_color 4 #00AAAA
+Staphylococcaceae.Staphylococcus.Swarneri ring_color 4 #00AAAA
+Bacillaceae.Anoxybacillus.Aflavithermus ring_height 5 2.48900854747
+Bacillaceae.Bacillus.Bamyloliquefaciens ring_height 5 2.5569451352
+Bacillaceae.Bacillus.Banthracis ring_height 5 1.4616581923
+Bacillaceae.Bacillus.Batrophaeus ring_height 5 1.5214251868
+Bacillaceae.Bacillus.Bcellulosilyticus ring_height 5 0.275406475474
+Bacillaceae.Bacillus.Bcereus ring_height 5 3.96420929693
+Bacillaceae.Bacillus.Bclausii ring_height 5 0.36682224696
+Bacillaceae.Bacillus.Bcoagulans ring_height 5 3.11304018594
+Bacillaceae.Bacillus.Bcoahuilensis ring_height 5 3.17186920433
+Bacillaceae.Bacillus.Bhalodurans ring_height 5 1.03261323231
+Bacillaceae.Bacillus.Blicheniformis ring_height 5 2.84479580061
+Bacillaceae.Bacillus.Bmegaterium ring_height 5 1.97722308257
+Bacillaceae.Bacillus.Bmycoides ring_height 5 2.66122684072
+Bacillaceae.Bacillus.Bpseudofirmus ring_height 5 1.43290815777
+Bacillaceae.Bacillus.Bpseudomycoides ring_height 5 1.11687288226
+Bacillaceae.Bacillus.Bpumilus ring_height 5 1.08510776094
+Bacillaceae.Bacillus.Bselenitireducens ring_height 5 2.77859614711
+Bacillaceae.Bacillus.Bsubtilis ring_height 5 0.554574632132
+Bacillaceae.Bacillus.Bthuringiensis ring_height 5 1.57378483828
+Bacillaceae.Bacillus.Bweihenstephanensis ring_height 5 2.70028276238
+Bacillaceae.Caldalkalibacillus.Cthermarum ring_height 5 1.86166458022
+Bacillaceae.Geobacillus.Gkaustophilus ring_height 5 0.0242900869783
+Bacillaceae.Geobacillus.Gthermodenitrificans ring_height 5 3.07841560635
+Bacillaceae.Geobacillus.Gthermoglucosidasius ring_height 5 3.46510209264
+Bacillaceae.Lysinibacillus.Lfusiformis ring_height 5 1.35283141925
+Bacillaceae.Lysinibacillus.Lsphaericus ring_height 5 3.92974800987
+Bacillaceae.Oceanobacillus.Oiheyensis ring_height 5 2.28533114154
+Listeriaceae.Listeria.Lgrayi ring_height 5 0.818507572602
+Listeriaceae.Listeria.Linnocua ring_height 5 0.800083345466
+Listeriaceae.Listeria.Lmonocytogenes ring_height 5 0.978937868742
+Listeriaceae.Listeria.Lseeligeri ring_height 5 0.892990893608
+Listeriaceae.Listeria.Lwelshimeri ring_height 5 2.52510303764
+Paenibacillaceae.Brevibacillus.Bbrevis ring_height 5 1.94634642846
+Paenibacillaceae.Brevibacillus.Blaterosporus ring_height 5 2.53149220001
+Paenibacillaceae.Paenibacillus.Pcurdlanolyticus ring_height 5 0.617175345723
+Paenibacillaceae.Paenibacillus.Plarvae ring_height 5 1.49321243619
+Paenibacillaceae.Paenibacillus.Pmucilaginosus ring_height 5 0.0817469468168
+Paenibacillaceae.Paenibacillus.Ppolymyxa ring_height 5 3.26055825675
+Paenibacillaceae.Paenibacillus.Pvortex ring_height 5 2.50175369758
+Staphylococcaceae.Macrococcus.Mcaseolyticus ring_height 5 2.6642090736
+Staphylococcaceae.Staphylococcus.Saureus ring_height 5 1.21391731853
+Staphylococcaceae.Staphylococcus.Scapitis ring_height 5 0.92038173113
+Staphylococcaceae.Staphylococcus.Scaprae ring_height 5 3.22193378354
+Staphylococcaceae.Staphylococcus.Scarnosus ring_height 5 2.59751672494
+Staphylococcaceae.Staphylococcus.Sepidermidis ring_height 5 0.365700208191
+Staphylococcaceae.Staphylococcus.Shaemolyticus ring_height 5 1.34748130999
+Staphylococcaceae.Staphylococcus.Shominis ring_height 5 0.0961524114391
+Staphylococcaceae.Staphylococcus.Slugdunensis ring_height 5 2.02393979902
+Staphylococcaceae.Staphylococcus.Spseudintermedius ring_height 5 1.94654560527
+Staphylococcaceae.Staphylococcus.Ssaprophyticus ring_height 5 2.75289926136
+Staphylococcaceae.Staphylococcus.Swarneri ring_height 5 2.39465498028
+
+
+Bacillaceae.Bacillus.Bsubtilis clade_marker_label 65
+Staphylococcaceae.Staphylococcus.Saureus clade_marker_label 17
+Bacillaceae.Bacillus.Banthracis clade_marker_label x
+Bacillaceae.Bacillus.Banthracis clade_marker_font_color w
+Bacillaceae.Bacillus.Banthracis clade_marker_edge_color b
+Bacillaceae.Lysinibacillus.Lfusiformis clade_marker_label 156
+Bacillaceae.Lysinibacillus.Lfusiformis clade_marker_edge_color b
+Bacillaceae.Oceanobacillus.Oiheyensis clade_marker_label 18
+Bacillaceae.Oceanobacillus.Oiheyensis clade_marker_color k
+Bacillaceae.Oceanobacillus.Oiheyensis clade_marker_font_color w
+
diff --git a/examples/guide/guide.txt b/examples/guide/guide.txt
new file mode 100644
index 0000000..58bcefc
--- /dev/null
+++ b/examples/guide/guide.txt
@@ -0,0 +1,51 @@
+Bacillaceae.Anoxybacillus.Aflavithermus
+Bacillaceae.Bacillus.Bamyloliquefaciens
+Bacillaceae.Bacillus.Banthracis
+Bacillaceae.Bacillus.Batrophaeus
+Bacillaceae.Bacillus.Bcellulosilyticus
+Bacillaceae.Bacillus.Bcereus
+Bacillaceae.Bacillus.Bclausii
+Bacillaceae.Bacillus.Bcoagulans
+Bacillaceae.Bacillus.Bcoahuilensis
+Bacillaceae.Bacillus.Bhalodurans
+Bacillaceae.Bacillus.Blicheniformis
+Bacillaceae.Bacillus.Bmegaterium
+Bacillaceae.Bacillus.Bmycoides
+Bacillaceae.Bacillus.Bpseudofirmus
+Bacillaceae.Bacillus.Bpseudomycoides
+Bacillaceae.Bacillus.Bpumilus
+Bacillaceae.Bacillus.Bselenitireducens
+Bacillaceae.Bacillus.Bsubtilis
+Bacillaceae.Bacillus.Bthuringiensis
+Bacillaceae.Bacillus.Bweihenstephanensis
+Bacillaceae.Caldalkalibacillus.Cthermarum
+Bacillaceae.Geobacillus.Gkaustophilus
+Bacillaceae.Geobacillus.Gthermodenitrificans
+Bacillaceae.Geobacillus.Gthermoglucosidasius
+Bacillaceae.Lysinibacillus.Lfusiformis
+Bacillaceae.Lysinibacillus.Lsphaericus
+Bacillaceae.Oceanobacillus.Oiheyensis
+Listeriaceae.Listeria.Lgrayi
+Listeriaceae.Listeria.Linnocua
+Listeriaceae.Listeria.Lmonocytogenes
+Listeriaceae.Listeria.Lseeligeri
+Listeriaceae.Listeria.Lwelshimeri
+Paenibacillaceae.Brevibacillus.Bbrevis
+Paenibacillaceae.Brevibacillus.Blaterosporus
+Paenibacillaceae.Paenibacillus.Pcurdlanolyticus
+Paenibacillaceae.Paenibacillus.Plarvae
+Paenibacillaceae.Paenibacillus.Pmucilaginosus
+Paenibacillaceae.Paenibacillus.Ppolymyxa
+Paenibacillaceae.Paenibacillus.Pvortex
+Staphylococcaceae.Macrococcus.Mcaseolyticus
+Staphylococcaceae.Staphylococcus.Saureus
+Staphylococcaceae.Staphylococcus.Scapitis
+Staphylococcaceae.Staphylococcus.Scaprae
+Staphylococcaceae.Staphylococcus.Scarnosus
+Staphylococcaceae.Staphylococcus.Sepidermidis
+Staphylococcaceae.Staphylococcus.Shaemolyticus
+Staphylococcaceae.Staphylococcus.Shominis
+Staphylococcaceae.Staphylococcus.Slugdunensis
+Staphylococcaceae.Staphylococcus.Spseudintermedius
+Staphylococcaceae.Staphylococcus.Ssaprophyticus
+Staphylococcaceae.Staphylococcus.Swarneri
diff --git a/examples/guide/step0.sh b/examples/guide/step0.sh
new file mode 100755
index 0000000..7efce0a
--- /dev/null
+++ b/examples/guide/step0.sh
@@ -0,0 +1,2 @@
+graphlan.py guide.txt step_0.png --dpi 300 --size 3.5
+graphlan.py guide.txt step_0.svg --dpi 300 --size 3.5
diff --git a/examples/guide/step1.sh b/examples/guide/step1.sh
new file mode 100755
index 0000000..f8e4d44
--- /dev/null
+++ b/examples/guide/step1.sh
@@ -0,0 +1,3 @@
+graphlan_annotate.py --annot annot_0.txt guide.txt guide_1.xml
+graphlan.py guide_1.xml step_1.png --dpi 300 --size 3.5
+graphlan.py guide_1.xml step_1.svg --dpi 300 --size 3.5
diff --git a/examples/guide/step2.sh b/examples/guide/step2.sh
new file mode 100755
index 0000000..97b4397
--- /dev/null
+++ b/examples/guide/step2.sh
@@ -0,0 +1,3 @@
+graphlan_annotate.py --annot annot_1.txt guide_1.xml guide_2.xml
+graphlan.py guide_2.xml step_2.png --dpi 300 --size 3.5
+graphlan.py guide_2.xml step_2.svg --dpi 300 --size 3.5
diff --git a/examples/guide/step3.sh b/examples/guide/step3.sh
new file mode 100755
index 0000000..8e81afa
--- /dev/null
+++ b/examples/guide/step3.sh
@@ -0,0 +1,3 @@
+graphlan_annotate.py --annot annot_2.txt guide_2.xml guide_3.xml
+graphlan.py guide_3.xml step_3.png --dpi 300 --size 3.5
+graphlan.py guide_3.xml step_3.svg --dpi 300 --size 3.5
diff --git a/examples/guide/step4.sh b/examples/guide/step4.sh
new file mode 100755
index 0000000..9c79bdb
--- /dev/null
+++ b/examples/guide/step4.sh
@@ -0,0 +1,3 @@
+graphlan_annotate.py --annot annot_3.txt guide_3.xml guide_4.xml
+graphlan.py guide_4.xml step_4.png --dpi 300 --size 3.5 --pad 0.0
+graphlan.py guide_4.xml step_4.svg --dpi 300 --size 3.5 --pad 0.0
diff --git a/examples/gut_microbiome/annot.txt b/examples/gut_microbiome/annot.txt
new file mode 100644
index 0000000..00fb9c0
--- /dev/null
+++ b/examples/gut_microbiome/annot.txt
@@ -0,0 +1,570 @@
+title Healthy Gut Microbiome (HMP+MetaHIT)
+title_font_size 13
+start_rotation 70
+annotation_background_alpha 0.15
+clade_separation 0.35
+annotation_legend_font_size 5
+annotation_font_size 5
+annotation_font_stretch 0
+clade_marker_size 3
+branch_bracket_depth 0.5
+branch_thickness 1.2
+p__Proteobacteria.c__Gammaproteobacteria annotation_background_color r
+#p__Proteobacteria.c__Gammaproteobacteria clade_marker_label 1829
+p__Proteobacteria.c__Gammaproteobacteria.o__Enterobacteriales.f__Enterobacteriaceae.g__Escherichia.s__Escherichia_coli clade_marker_size 16.3847530794
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Bacteroidaceae.g__Bacteroides.s__Bacteroides_coprocola clade_marker_size 15.7445281109
+p__Proteobacteria.c__Betaproteobacteria.o__Burkholderiales.f__Sutterellaceae clade_marker_size 16.7615496384
+p__Firmicutes.c__Negativicutes.o__Selenomonadales.f__Veillonellaceae.g__Veillonella clade_marker_size 11.113364546
+p__Actinobacteria.c__Actinobacteria.o__Bifidobacteriales.f__Bifidobacteriaceae clade_marker_size 18.3402560691
+p__Proteobacteria.c__Betaproteobacteria.o__Nitrosomonadales.f__Nitrosomonadaceae.g__Nitrosomonadaceae_unclassified clade_marker_size 10.1114547424
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Bacteroidaceae.g__Bacteroides.s__Bacteroides_xylanisolvens clade_marker_size 24.8376157452
+p__Firmicutes.c__Bacilli.o__Lactobacillales.f__Streptococcaceae.g__Streptococcus clade_marker_size 12.3731519515
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Porphyromonadaceae clade_marker_size 33.268035254
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Clostridiaceae.g__Clostridium clade_marker_size 16.7212165703
+p__Verrucomicrobia.c__Verrucomicrobiae.o__Verrucomicrobiales.f__Verrucomicrobiaceae clade_marker_size 19.8420948847
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Prevotellaceae.g__Prevotella clade_marker_size 41.4289803845
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Clostridiales_Family_XI_Incertae_Sedis.g__Peptoniphilus.s__Peptoniphilus_unclassified clade_marker_size 10.1600095467
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Prevotellaceae.g__Prevotella.s__Prevotella_timonensis clade_marker_size 10.3946636562
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Lachnospiraceae.g__Coprococcus clade_marker_size 17.6084817655
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Ruminococcaceae.g__Subdoligranulum.s__Subdoligranulum_variabile clade_marker_size 10.257537716
+p__Lentisphaerae.c__Lentisphaerae_uncl.o__Victivallales.f__Victivallaceae.g__Victivallis clade_marker_size 10.402492199
+p__Proteobacteria.c__Gammaproteobacteria.o__Pseudomonadales.f__Pseudomonadaceae.g__Pseudomonas.s__Pseudomonas_unclassified clade_marker_size 10.1494749599
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Ruminococcaceae.g__Ruminococcus clade_marker_size 31.2219023422
+p__Firmicutes.c__Bacilli.o__Lactobacillales.f__Streptococcaceae.g__Streptococcus.s__Streptococcus_salivarius clade_marker_size 10.6630184073
+p__Firmicutes.c__Erysipelotrichi.o__Erysipelotrichales.f__Erysipelotrichaceae.g__Coprobacillus clade_marker_size 12.7181759569
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Clostridiaceae.g__Clostridium.s__Clostridium_symbiosum clade_marker_size 10.0737778035
+p__Proteobacteria.c__Gammaproteobacteria clade_marker_size 18.6973017573
+p__Firmicutes.c__Bacilli.o__Lactobacillales.f__Streptococcaceae.g__Lactococcus.s__Lactococcus_lactis clade_marker_size 10.0646955392
+p__Proteobacteria.c__Gammaproteobacteria.o__Alteromonadales clade_marker_size 10.1120616342
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Lachnospiraceae clade_marker_size 39.1278731944
+p__Firmicutes.c__Erysipelotrichi.o__Erysipelotrichales.f__Erysipelotrichaceae.g__Turicibacter.s__Turicibacter_unclassified clade_marker_size 10.1470155987
+p__Firmicutes.c__Negativicutes clade_marker_size 30.3716428558
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Lachnospiraceae.g__Butyrivibrio.s__Butyrivibrio_crossotus clade_marker_size 26.9463258345
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Bacteroidaceae.g__Bacteroides.s__Bacteroides_fragilis clade_marker_size 12.5182759749
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Lachnospiraceae.g__Roseburia.s__Roseburia_intestinalis clade_marker_size 20.9853326759
+p__Proteobacteria.c__Deltaproteobacteria.o__Desulfovibrionales clade_marker_size 13.5982991832
+p__Firmicutes.c__Clostridia.o__Clostridiales clade_marker_size 72.9170595132
+p__Firmicutes.c__Negativicutes.o__Selenomonadales.f__Veillonellaceae.g__Megasphaera.s__Megasphaera_unclassified clade_marker_size 10.2560220088
+p__Fusobacteria.c__Fusobacteria.o__Fusobacteriales.f__Fusobacteriaceae.g__Fusobacterium.s__Fusobacterium_mortiferum clade_marker_size 10.0697920453
+p__Proteobacteria.c__Deltaproteobacteria.o__Desulfovibrionales.f__Desulfovibrionaceae.g__Desulfovibrio.s__Desulfovibrio_piger clade_marker_size 10.6117285722
+p__Actinobacteria.c__Actinobacteria.o__Bifidobacteriales.f__Bifidobacteriaceae.g__Bifidobacterium.s__Bifidobacterium_pseudocatenulatum clade_marker_size 10.3863937841
+p__Firmicutes.c__Bacilli.o__Lactobacillales.f__Lactobacillaceae.g__Lactobacillus.s__Lactobacillus_ruminis clade_marker_size 10.3255857746
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Prevotellaceae clade_marker_size 41.4289803845
+p__Firmicutes.c__Negativicutes.o__Selenomonadales.f__Veillonellaceae.g__Mitsuokella.s__Mitsuokella_multacida clade_marker_size 10.7456547192
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Rikenellaceae.g__Alistipes clade_marker_size 44.3198224997
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Eubacteriaceae clade_marker_size 44.3854820558
+p__Actinobacteria.c__Actinobacteria.o__Coriobacteriales.f__Coriobacteriaceae clade_marker_size 13.495873515
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Bacteroidaceae.g__Bacteroides.s__Bacteroides_vulgatus clade_marker_size 40.6081628414
+p__Actinobacteria.c__Actinobacteria.o__Coriobacteriales.f__Coriobacteriaceae.g__Collinsella.s__Collinsella_aerofaciens clade_marker_size 12.8343610042
+p__Cyanobacteria.c__Cyanophyceae.o__Nostocales.f__Nostocaceae clade_marker_size 10.1674242905
+p__Bacteroidetes.c__Flavobacteria clade_marker_size 12.6380419108
+p__Fusobacteria.c__Fusobacteria.o__Leptotrichales clade_marker_size 10.209199993
+p__Proteobacteria.c__Deltaproteobacteria.o__Desulfovibrionales.f__Desulfovibrionaceae.g__Bilophila.s__Bilophila_wadsworthia clade_marker_size 11.7785555322
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Ruminococcaceae.g__Ruminococcus.s__Ruminococcus_obeum clade_marker_size 12.5700828016
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Ruminococcaceae.g__Anaerotruncus clade_marker_size 11.0645579542
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Prevotellaceae.g__Prevotella.s__Prevotella_bergensis clade_marker_size 10.4482952011
+p__Cyanobacteria.c__Cyanophyceae.o__Synechococcales.f__Synechococcaceae.g__Prochlorococcus clade_marker_size 10.0475451961
+p__Actinobacteria.c__Actinobacteria.o__Coriobacteriales.f__Coriobacteriaceae.g__Collinsella.s__Collinsella_stercoris clade_marker_size 10.0546737398
+p__Proteobacteria.c__Gammaproteobacteria.o__Alteromonadales.f__Psychromonadaceae clade_marker_size 10.0724319258
+p__Euryarchaeota.c__Methanobacteria clade_marker_size 11.6657320722
+p__Actinobacteria.c__Actinobacteria.o__Coriobacteriales.f__Coriobacteriaceae.g__Gordonibacter.s__Gordonibacter_pamelaeae clade_marker_size 10.1361237762
+p__Firmicutes.c__Bacilli.o__Lactobacillales.f__Enterococcaceae clade_marker_size 10.0668749593
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Eubacteriaceae.g__Eubacterium.s__Eubacterium_hallii clade_marker_size 13.5004434018
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Ruminococcaceae.g__Faecalibacterium.s__Faecalibacterium_cf clade_marker_size 20.1176413647
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Ruminococcaceae.g__Faecalibacterium.s__Faecalibacterium_prausnitzii clade_marker_size 29.2951524458
+p__Actinobacteria.c__Actinobacteria.o__Coriobacteriales.f__Coriobacteriaceae.g__Collinsella clade_marker_size 12.9728982506
+p__Firmicutes.c__Erysipelotrichi clade_marker_size 14.6756549242
+p__Proteobacteria.c__Gammaproteobacteria.o__Pseudomonadales.f__Moraxellaceae clade_marker_size 10.0531000564
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Clostridiales_uncl.g__Blautia.s__Blautia_unclassified clade_marker_size 12.6628793048
+p__Euryarchaeota.c__Methanobacteria.o__Methanobacteriales.f__Methanobacteriaceae.g__Methanobrevibacter.s__Methanobrevibacter_smithii clade_marker_size 11.6353338305
+p__Proteobacteria.c__Betaproteobacteria.o__Nitrosomonadales.f__Nitrosomonadaceae clade_marker_size 10.1133835184
+p__Proteobacteria.c__Gammaproteobacteria.o__Enterobacteriales.f__Enterobacteriaceae.g__Escherichia.s__Escherichia_unclassified clade_marker_size 10.2094325607
+p__Proteobacteria.c__Deltaproteobacteria.o__Desulfobacterales.f__Desulfobulbaceae clade_marker_size 10.7136261323
+p__Proteobacteria.c__Alphaproteobacteria.o__Rickettsiales clade_marker_size 10.046749811
+p__Firmicutes.c__Bacilli.o__Lactobacillales.f__Streptococcaceae.g__Streptococcus.s__Streptococcus_anginosus clade_marker_size 10.0653554209
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Bacteroidaceae.g__Bacteroides.s__Bacteroides_intestinalis clade_marker_size 17.5240718488
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Eubacteriaceae.g__Eubacterium clade_marker_size 44.3732702258
+p__Verrucomicrobia.c__Verrucomicrobiae.o__Verrucomicrobiales clade_marker_size 19.8420948847
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Lachnospiraceae.g__Dorea.s__Dorea_formicigenerans clade_marker_size 12.279932883
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Rikenellaceae clade_marker_size 44.3198224997
+p__Firmicutes.c__Negativicutes.o__Selenomonadales.f__Veillonellaceae.g__Megasphaera clade_marker_size 10.2716103987
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Bacteroidaceae.g__Bacteroides.s__Bacteroides_caccae clade_marker_size 25.0560295044
+p__Firmicutes.c__Negativicutes.o__Selenomonadales.f__Veillonellaceae.g__Dialister clade_marker_size 26.6858924936
+p__Proteobacteria.c__Gammaproteobacteria.o__Enterobacteriales.f__Enterobacteriaceae.g__Salmonella.s__Salmonella_enterica clade_marker_size 10.0267498746
+p__Cyanobacteria.c__Cyanophyceae.o__Synechococcales.f__Synechococcaceae clade_marker_size 10.053371829
+p__Cyanobacteria.c__Cyanophyceae.o__Synechococcales.f__Synechococcaceae.g__Prochlorococcus.s__Prochlorococcus_marinus clade_marker_size 10.0475451961
+p__Lentisphaerae.c__Lentisphaerae_uncl.o__Victivallales.f__Victivallaceae.g__Victivallis.s__Victivallis_vadensis clade_marker_size 10.402492199
+p__Bacteroidetes.c__Flavobacteria.o__Flavobacteriales.f__Flavobacteriaceae.g__Polaribacter.s__Polaribacter_unclassified clade_marker_size 11.7641074342
+p__Actinobacteria.c__Actinobacteria.o__Coriobacteriales.f__Coriobacteriaceae.g__Collinsella.s__Collinsella_intestinalis clade_marker_size 10.0742796179
+p__Proteobacteria.c__Gammaproteobacteria.o__Enterobacteriales.f__Enterobacteriaceae.g__Salmonella clade_marker_size 10.0269010858
+p__Bacteroidetes.c__Flavobacteria.o__Flavobacteriales.f__Flavobacteriaceae.g__Polaribacter clade_marker_size 11.7655180167
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Ruminococcaceae.g__Ruminococcus.s__Ruminococcus_bromii clade_marker_size 25.93983634
+p__Proteobacteria.c__Alphaproteobacteria.o__Rhizobiales.f__Aurantimonadaceae clade_marker_size 13.7194940726
+p__Cyanobacteria.c__Cyanophyceae.o__Nostocales clade_marker_size 10.1674242905
+p__Cyanobacteria.c__Cyanophyceae clade_marker_size 10.2475666396
+p__Bacteroidetes.c__Flavobacteria.o__Flavobacteriales.f__Flavobacteriaceae clade_marker_size 12.6116612425
+p__Fusobacteria.c__Fusobacteria.o__Fusobacteriales.f__Fusobacteriaceae.g__Fusobacterium clade_marker_size 10.1038483755
+p__Fusobacteria.c__Fusobacteria clade_marker_size 10.3166514193
+p__Proteobacteria.c__Gammaproteobacteria.o__Pseudomonadales.f__Moraxellaceae.g__Acinetobacter clade_marker_size 10.0479187212
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Prevotellaceae.g__Prevotella.s__Prevotella_disiens clade_marker_size 10.0660300772
+p__Fusobacteria.c__Fusobacteria.o__Fusobacteriales.f__Fusobacteriaceae clade_marker_size 10.1093119515
+p__Proteobacteria.c__Betaproteobacteria.o__Burkholderiales.f__Sutterellaceae.g__Sutterella clade_marker_size 16.7615496384
+p__Firmicutes.c__Erysipelotrichi.o__Erysipelotrichales.f__Erysipelotrichaceae.g__Turicibacter clade_marker_size 10.1470155987
+p__Proteobacteria.c__Betaproteobacteria clade_marker_size 17.3411746358
+p__Firmicutes.c__Bacilli.o__Lactobacillales clade_marker_size 13.1353819505
+p__Verrucomicrobia clade_marker_size 19.8509085507
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Clostridiales_Family_XI_Incertae_Sedis.g__Anaerococcus.s__Anaerococcus_unclassified clade_marker_size 11.5879023319
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Porphyromonadaceae.g__Parabacteroides.s__Parabacteroides_johnsonii clade_marker_size 13.2987063638
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Porphyromonadaceae.g__Parabacteroides.s__Parabacteroides_unclassified clade_marker_size 10.3854288548
+p__Firmicutes.c__Bacilli.o__Lactobacillales.f__Lactobacillaceae.g__Pediococcus clade_marker_size 10.038485333
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Ruminococcaceae.g__Subdoligranulum clade_marker_size 10.257537716
+p__Verrucomicrobia.c__Verrucomicrobiae.o__Verrucomicrobiales.f__Verrucomicrobiaceae.g__Akkermansia clade_marker_size 19.8411425788
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Lachnospiraceae.g__Butyrivibrio clade_marker_size 27.0425711768
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Clostridiales_uncl clade_marker_size 12.9054601984
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Bacteroidaceae.g__Bacteroides.s__Bacteroides_finegoldii clade_marker_size 21.1504890096
+p__Cyanobacteria.c__Cyanophyceae.o__Synechococcales clade_marker_size 10.0536207982
+p__Proteobacteria.c__Epsilonproteobacteria.o__Campylobacterales clade_marker_size 10.0594350596
+p__Firmicutes.c__Erysipelotrichi.o__Erysipelotrichales.f__Erysipelotrichaceae.g__Coprobacillus.s__Coprobacillus_unclassified clade_marker_size 12.5162541149
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Eubacteriaceae.g__Eubacterium.s__Eubacterium_rectale clade_marker_size 34.3455090249
+p__Actinobacteria.c__Actinobacteria.o__Bifidobacteriales.f__Bifidobacteriaceae.g__Bifidobacterium.s__Bifidobacterium_adolescentis clade_marker_size 15.3442823261
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Clostridiales_Family_XI_Incertae_Sedis clade_marker_size 12.1391304014
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Ruminococcaceae.g__Ruminococcus.s__Ruminococcus_torques clade_marker_size 15.7044266662
+p__Firmicutes.c__Bacilli.o__Lactobacillales.f__Streptococcaceae.g__Streptococcus.s__Streptococcus_parasanguinis clade_marker_size 10.7952897866
+p__Chlamydiae.c__Chlamydiae.o__Chlamydiales.f__Chlamydiaceae clade_marker_size 10.128305868
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Lachnospiraceae.g__Coprococcus.s__Coprococcus_comes clade_marker_size 15.1330632974
+p__Cyanobacteria clade_marker_size 10.2476763543
+p__Firmicutes.c__Negativicutes.o__Selenomonadales.f__Veillonellaceae.g__Dialister.s__Dialister_invisus clade_marker_size 26.6735510912
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Clostridiales_Family_XI_Incertae_Sedis.g__Anaerococcus clade_marker_size 11.6243439572
+p__Firmicutes.c__Bacilli.o__Lactobacillales.f__Enterococcaceae.g__Enterococcus clade_marker_size 10.0668749593
+p__Firmicutes.c__Clostridia clade_marker_size 72.9377327879
+p__Proteobacteria.c__Gammaproteobacteria.o__Pseudomonadales.f__Pseudomonadaceae.g__Pseudomonas clade_marker_size 10.1514996889
+p__Firmicutes.c__Negativicutes.o__Selenomonadales.f__Veillonellaceae.g__Megamonas clade_marker_size 10.497999547
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Ruminococcaceae.g__Anaerotruncus.s__Anaerotruncus_colihominis clade_marker_size 11.0645579542
+p__Proteobacteria.c__Betaproteobacteria.o__Burkholderiales.f__Sutterellaceae.g__Sutterella.s__Sutterella_wadsworthensis clade_marker_size 16.7615496384
+p__Firmicutes.c__Negativicutes.o__Selenomonadales.f__Veillonellaceae.g__Mitsuokella clade_marker_size 10.7456547192
+p__Proteobacteria.c__Gammaproteobacteria.o__Enterobacteriales clade_marker_size 17.4475246268
+p__Firmicutes.c__Negativicutes.o__Selenomonadales clade_marker_size 30.3716428558
+p__Fusobacteria.c__Fusobacteria.o__Leptotrichales.f__Leptotrichales_unclassified clade_marker_size 10.1961153614
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Lachnospiraceae.g__Anaerostipes.s__Anaerostipes_caccae clade_marker_size 10.168697571
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Eubacteriaceae.g__Eubacterium.s__Eubacterium_siraeum clade_marker_size 24.1628166702
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Clostridiales_uncl.g__Blautia clade_marker_size 12.8977417984
+p__Firmicutes.c__Negativicutes.o__Selenomonadales.f__Veillonellaceae.g__Veillonella.s__Veillonella_atypica clade_marker_size 10.2642919614
+p__Bacteroidetes.c__Sphingobacteria.o__Sphingobacteriales clade_marker_size 12.8503048583
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Clostridiaceae.g__Clostridium.s__Clostridium_bartlettii clade_marker_size 10.4958571162
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Clostridiaceae.g__Clostridium.s__Clostridium_bolteae clade_marker_size 10.519455803
+p__Firmicutes.c__Negativicutes.o__Selenomonadales.f__Veillonellaceae.g__Veillonella.s__Veillonella_parvula clade_marker_size 10.5808706225
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Lachnospiraceae.g__Dorea.s__Dorea_longicatena clade_marker_size 14.3964205941
+p__Firmicutes.c__Bacilli.o__Lactobacillales.f__Lactobacillaceae.g__Lactobacillus clade_marker_size 10.5633411997
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+p__Firmicutes.c__Negativicutes.o__Selenomonadales.f__Veillonellaceae.g__Dialister clade_marker_color #004200
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Ruminococcaceae.g__Ruminococcus.s__Ruminococcus_bromii clade_marker_color #003E00
+p__Proteobacteria.c__Betaproteobacteria.o__Burkholderiales.f__Sutterellaceae.g__Sutterella clade_marker_color #440000
+p__Proteobacteria.c__Betaproteobacteria clade_marker_color #410000
+p__Verrucomicrobia clade_marker_color #004D00
+p__Verrucomicrobia.c__Verrucomicrobiae.o__Verrucomicrobiales.f__Verrucomicrobiaceae.g__Akkermansia clade_marker_color #004D00
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Lachnospiraceae.g__Butyrivibrio clade_marker_color #00BE00
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Bacteroidaceae.g__Bacteroides.s__Bacteroides_finegoldii clade_marker_color #C00000
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Eubacteriaceae.g__Eubacterium.s__Eubacterium_rectale clade_marker_color #003600
+p__Actinobacteria.c__Actinobacteria.o__Bifidobacteriales.f__Bifidobacteriaceae.g__Bifidobacterium.s__Bifidobacterium_adolescentis clade_marker_color #00C000
+p__Firmicutes.c__Negativicutes.o__Selenomonadales.f__Veillonellaceae.g__Dialister.s__Dialister_invisus clade_marker_color #004200
+p__Firmicutes.c__Clostridia clade_marker_color #004F00
+p__Proteobacteria.c__Betaproteobacteria.o__Burkholderiales.f__Sutterellaceae.g__Sutterella.s__Sutterella_wadsworthensis clade_marker_color #440000
+p__Proteobacteria.c__Gammaproteobacteria.o__Enterobacteriales clade_marker_color #002E00
+p__Firmicutes.c__Negativicutes.o__Selenomonadales clade_marker_color #004E00
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Eubacteriaceae.g__Eubacterium.s__Eubacterium_siraeum clade_marker_color #008F00
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Ruminococcaceae clade_marker_color #003800
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Porphyromonadaceae.g__Odoribacter clade_marker_color #250000
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Bacteroidaceae.g__Bacteroides.s__Bacteroides_uniformis clade_marker_color #3A0000
+p__Proteobacteria.c__Gammaproteobacteria.o__Enterobacteriales.f__Enterobacteriaceae clade_marker_color #002E00
+p__Bacteroidetes clade_marker_color #3B0000
+p__Actinobacteria.c__Actinobacteria.o__Bifidobacteriales.f__Bifidobacteriaceae.g__Bifidobacterium clade_marker_color #008E00
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Ruminococcaceae.g__Faecalibacterium clade_marker_color #003A00
+p__Actinobacteria.c__Actinobacteria clade_marker_color #007100
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Rikenellaceae.g__Alistipes.s__Alistipes_putredinis clade_marker_color #380000
+p__Proteobacteria clade_marker_color #002800
+p__Verrucomicrobia.c__Verrucomicrobiae.o__Verrucomicrobiales.f__Verrucomicrobiaceae.g__Akkermansia.s__Akkermansia_muciniphila clade_marker_color #004D00
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Rikenellaceae.g__Alistipes.s__Alistipes_shahii clade_marker_color #310000
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Lachnospiraceae.g__Roseburia clade_marker_color #006300
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Porphyromonadaceae.g__Parabacteroides clade_marker_color #550000
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Lachnospiraceae.g__Roseburia.s__Roseburia_inulinivorans clade_marker_color #006200
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Bacteroidaceae.g__Bacteroides.s__Bacteroides_stercoris clade_marker_color #BE0000
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Bacteroidaceae.g__Bacteroides.s__Bacteroides_cellulosilyticus clade_marker_color #260000
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Eubacteriaceae.g__Eubacterium.s__Eubacterium_eligens clade_marker_color #008600
+p__Firmicutes.c__Negativicutes.o__Selenomonadales.f__Veillonellaceae clade_marker_color #004300
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Bacteroidaceae.g__Bacteroides clade_marker_color #520000
+p__Firmicutes clade_marker_color #004F00
+p__Actinobacteria clade_marker_color #007100
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Bacteroidaceae.g__Bacteroides.s__Bacteroides_unclassified clade_marker_color #9E0000
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Clostridiaceae clade_marker_color #005200
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales clade_marker_color #3B0000
+p__Bacteroidetes.c__Bacteroidia clade_marker_color #3B0000
+p__Firmicutes.c__Negativicutes.o__Selenomonadales.f__Acidaminococcaceae.g__Phascolarctobacterium clade_marker_color #00FF00
+p__Firmicutes.c__Negativicutes.o__Selenomonadales.f__Acidaminococcaceae clade_marker_color #009500
+p__Firmicutes.c__Negativicutes.o__Selenomonadales.f__Acidaminococcaceae.g__Phascolarctobacterium.s__Phascolarctobacterium_unclassified clade_marker_color #00FF00
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Bacteroidaceae clade_marker_color #520000
+p__Proteobacteria.c__Betaproteobacteria.o__Burkholderiales clade_marker_color #430000
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Bacteroidaceae.g__Bacteroides.s__Bacteroides_eggerthii clade_marker_color #003300
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Bacteroidaceae.g__Bacteroides.s__Bacteroides_thetaiotaomicron clade_marker_color #570000
+p__Verrucomicrobia.c__Verrucomicrobiae clade_marker_color #004D00
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Bacteroidaceae.g__Bacteroides.s__Bacteroides_plebeius clade_marker_color #002A00
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Porphyromonadaceae.g__Odoribacter.s__Odoribacter_splanchnicus clade_marker_color #250000
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Prevotellaceae.g__Prevotella.s__Prevotella_copri clade_marker_color #004D00
+p__Actinobacteria.c__Actinobacteria.o__Bifidobacteriales clade_marker_color #008D00
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Porphyromonadaceae.g__Parabacteroides.s__Parabacteroides_merdae clade_marker_color #5A0000
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Lachnospiraceae.g__Dorea clade_marker_color #007C00
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Bacteroidaceae.g__Bacteroides.s__Bacteroides_dorei clade_marker_color #480000
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Bacteroidaceae.g__Bacteroides.s__Bacteroides_ovatus clade_marker_color #FF0000
+p__Proteobacteria.c__Betaproteobacteria.o__Burkholderiales.f__Sutterellaceae annotation_background_color #440000
+p__Actinobacteria.c__Actinobacteria.o__Bifidobacteriales.f__Bifidobacteriaceae annotation_background_color #008D00
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Bacteroidaceae.g__Bacteroides.s__Bacteroides_xylanisolvens annotation_background_color #BB0000
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Porphyromonadaceae annotation_background_color #440000
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Clostridiaceae.g__Clostridium annotation_background_color #005200
+p__Verrucomicrobia.c__Verrucomicrobiae.o__Verrucomicrobiales.f__Verrucomicrobiaceae annotation_background_color #004D00
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Prevotellaceae.g__Prevotella annotation_background_color #004C00
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Lachnospiraceae.g__Coprococcus annotation_background_color #008200
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Ruminococcaceae.g__Ruminococcus annotation_background_color #003600
+p__Proteobacteria.c__Gammaproteobacteria annotation_background_color #003000
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Lachnospiraceae annotation_background_color #008400
+p__Firmicutes.c__Negativicutes annotation_background_color #004E00
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Lachnospiraceae.g__Butyrivibrio.s__Butyrivibrio_crossotus annotation_background_color #00C000
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Lachnospiraceae.g__Roseburia.s__Roseburia_intestinalis annotation_background_color #006300
+p__Firmicutes.c__Clostridia.o__Clostridiales annotation_background_color #004F00
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Prevotellaceae annotation_background_color #004C00
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Rikenellaceae.g__Alistipes annotation_background_color #350000
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Eubacteriaceae annotation_background_color #004F00
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Bacteroidaceae.g__Bacteroides.s__Bacteroides_vulgatus annotation_background_color #4B0000
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Ruminococcaceae.g__Faecalibacterium.s__Faecalibacterium_cf annotation_background_color #004B00
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Ruminococcaceae.g__Faecalibacterium.s__Faecalibacterium_prausnitzii annotation_background_color #003500
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Bacteroidaceae.g__Bacteroides.s__Bacteroides_intestinalis annotation_background_color #004800
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Eubacteriaceae.g__Eubacterium annotation_background_color #004F00
+p__Verrucomicrobia.c__Verrucomicrobiae.o__Verrucomicrobiales annotation_background_color #004D00
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Rikenellaceae annotation_background_color #350000
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Bacteroidaceae.g__Bacteroides.s__Bacteroides_caccae annotation_background_color #440000
+p__Firmicutes.c__Negativicutes.o__Selenomonadales.f__Veillonellaceae.g__Dialister annotation_background_color #004200
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Ruminococcaceae.g__Ruminococcus.s__Ruminococcus_bromii annotation_background_color #003E00
+p__Proteobacteria.c__Betaproteobacteria.o__Burkholderiales.f__Sutterellaceae.g__Sutterella annotation_background_color #440000
+p__Proteobacteria.c__Betaproteobacteria annotation_background_color #410000
+p__Verrucomicrobia.c__Verrucomicrobiae.o__Verrucomicrobiales.f__Verrucomicrobiaceae.g__Akkermansia annotation_background_color #004D00
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Lachnospiraceae.g__Butyrivibrio annotation_background_color #00BE00
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Bacteroidaceae.g__Bacteroides.s__Bacteroides_finegoldii annotation_background_color #C00000
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Eubacteriaceae.g__Eubacterium.s__Eubacterium_rectale annotation_background_color #003600
+p__Actinobacteria.c__Actinobacteria.o__Bifidobacteriales.f__Bifidobacteriaceae.g__Bifidobacterium.s__Bifidobacterium_adolescentis annotation_background_color #00C000
+p__Firmicutes.c__Negativicutes.o__Selenomonadales.f__Veillonellaceae.g__Dialister.s__Dialister_invisus annotation_background_color #004200
+p__Firmicutes.c__Clostridia annotation_background_color #004F00
+p__Proteobacteria.c__Betaproteobacteria.o__Burkholderiales.f__Sutterellaceae.g__Sutterella.s__Sutterella_wadsworthensis annotation_background_color #440000
+p__Proteobacteria.c__Gammaproteobacteria.o__Enterobacteriales annotation_background_color #002E00
+p__Firmicutes.c__Negativicutes.o__Selenomonadales annotation_background_color #004E00
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Eubacteriaceae.g__Eubacterium.s__Eubacterium_siraeum annotation_background_color #008F00
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Ruminococcaceae annotation_background_color #003800
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Porphyromonadaceae.g__Odoribacter annotation_background_color #250000
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Bacteroidaceae.g__Bacteroides.s__Bacteroides_uniformis annotation_background_color #3A0000
+p__Proteobacteria.c__Gammaproteobacteria.o__Enterobacteriales.f__Enterobacteriaceae annotation_background_color #002E00
+p__Actinobacteria.c__Actinobacteria.o__Bifidobacteriales.f__Bifidobacteriaceae.g__Bifidobacterium annotation_background_color #008E00
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Ruminococcaceae.g__Faecalibacterium annotation_background_color #003A00
+p__Actinobacteria.c__Actinobacteria annotation_background_color #007100
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Rikenellaceae.g__Alistipes.s__Alistipes_putredinis annotation_background_color #380000
+p__Verrucomicrobia.c__Verrucomicrobiae.o__Verrucomicrobiales.f__Verrucomicrobiaceae.g__Akkermansia.s__Akkermansia_muciniphila annotation_background_color #004D00
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Rikenellaceae.g__Alistipes.s__Alistipes_shahii annotation_background_color #310000
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Lachnospiraceae.g__Roseburia annotation_background_color #006300
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Porphyromonadaceae.g__Parabacteroides annotation_background_color #550000
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Lachnospiraceae.g__Roseburia.s__Roseburia_inulinivorans annotation_background_color #006200
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Bacteroidaceae.g__Bacteroides.s__Bacteroides_stercoris annotation_background_color #BE0000
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Bacteroidaceae.g__Bacteroides.s__Bacteroides_cellulosilyticus annotation_background_color #260000
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Eubacteriaceae.g__Eubacterium.s__Eubacterium_eligens annotation_background_color #008600
+p__Firmicutes.c__Negativicutes.o__Selenomonadales.f__Veillonellaceae annotation_background_color #004300
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Bacteroidaceae.g__Bacteroides annotation_background_color #520000
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Bacteroidaceae.g__Bacteroides.s__Bacteroides_unclassified annotation_background_color #9E0000
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Clostridiaceae annotation_background_color #005200
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales annotation_background_color #3B0000
+p__Bacteroidetes.c__Bacteroidia annotation_background_color #3B0000
+p__Firmicutes.c__Negativicutes.o__Selenomonadales.f__Acidaminococcaceae.g__Phascolarctobacterium annotation_background_color #00FF00
+p__Firmicutes.c__Negativicutes.o__Selenomonadales.f__Acidaminococcaceae annotation_background_color #009500
+p__Firmicutes.c__Negativicutes.o__Selenomonadales.f__Acidaminococcaceae.g__Phascolarctobacterium.s__Phascolarctobacterium_unclassified annotation_background_color #00FF00
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Bacteroidaceae annotation_background_color #520000
+p__Proteobacteria.c__Betaproteobacteria.o__Burkholderiales annotation_background_color #430000
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Bacteroidaceae.g__Bacteroides.s__Bacteroides_eggerthii annotation_background_color #003300
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Bacteroidaceae.g__Bacteroides.s__Bacteroides_thetaiotaomicron annotation_background_color #570000
+p__Verrucomicrobia.c__Verrucomicrobiae annotation_background_color #004D00
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Bacteroidaceae.g__Bacteroides.s__Bacteroides_plebeius annotation_background_color #002A00
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Porphyromonadaceae.g__Odoribacter.s__Odoribacter_splanchnicus annotation_background_color #250000
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Prevotellaceae.g__Prevotella.s__Prevotella_copri annotation_background_color #004D00
+p__Actinobacteria.c__Actinobacteria.o__Bifidobacteriales annotation_background_color #008D00
+p__Actinobacteria.c__Actinobacteria.o__Bifidobacteriales annotation_font_size 7
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Porphyromonadaceae.g__Parabacteroides.s__Parabacteroides_merdae annotation_background_color #5A0000
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Lachnospiraceae.g__Dorea annotation_background_color #007C00
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Bacteroidaceae.g__Bacteroides.s__Bacteroides_dorei annotation_background_color #480000
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Bacteroidaceae.g__Bacteroides.s__Bacteroides_ovatus annotation_background_color #FF0000
+p__Proteobacteria.c__Betaproteobacteria.o__Burkholderiales.f__Sutterellaceae annotation Sutterellaceae
+p__Proteobacteria.c__Betaproteobacteria.o__Burkholderiales.f__Sutterellaceae annotation_font_size 6
+p__Actinobacteria.c__Actinobacteria.o__Bifidobacteriales.f__Bifidobacteriaceae annotation Bifidobact.
+p__Actinobacteria.c__Actinobacteria.o__Bifidobacteriales.f__Bifidobacteriaceae annotation_font_size 6
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Bacteroidaceae.g__Bacteroides.s__Bacteroides_xylanisolvens annotation I:B. xylanisolvens
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Porphyromonadaceae annotation Porphyrom.
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Porphyromonadaceae annotation_font_size 6
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Clostridiaceae.g__Clostridium annotation Clostridium
+p__Verrucomicrobia.c__Verrucomicrobiae.o__Verrucomicrobiales.f__Verrucomicrobiaceae annotation Verrucomicrobiaceae
+p__Verrucomicrobia.c__Verrucomicrobiae.o__Verrucomicrobiales.f__Verrucomicrobiaceae annotation_font_size 6
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Prevotellaceae.g__Prevotella annotation Prevotella
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Lachnospiraceae.g__Coprococcus annotation Coprococ.
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Ruminococcaceae.g__Ruminococcus annotation Ruminoc.
+p__Proteobacteria.c__Gammaproteobacteria annotation Gammaproteobacteria
+p__Proteobacteria.c__Gammaproteobacteria annotation_font_size 8
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Lachnospiraceae annotation Lachnospiraceae
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Lachnospiraceae annotation_font_size 6
+p__Firmicutes.c__Negativicutes annotation Negativicutes
+p__Firmicutes.c__Negativicutes annotation_font_size 8
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Lachnospiraceae.g__Butyrivibrio.s__Butyrivibrio_crossotus annotation cr.
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Lachnospiraceae.g__Roseburia.s__Roseburia_intestinalis annotation O:R. intestinalis
+p__Firmicutes.c__Clostridia.o__Clostridiales annotation Clostridiales
+p__Firmicutes.c__Clostridia.o__Clostridiales annotation_font_size 7
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Prevotellaceae annotation Prevotell.
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Prevotellaceae annotation_font_size 6
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Rikenellaceae.g__Alistipes annotation Alistipes
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Eubacteriaceae annotation Eubacteriac.
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Eubacteriaceae annotation_font_size 6
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Bacteroidaceae.g__Bacteroides.s__Bacteroides_vulgatus annotation B:B. vulgatus
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Ruminococcaceae.g__Faecalibacterium.s__Faecalibacterium_prausnitzii annotation prausnitzii
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Bacteroidaceae.g__Bacteroides.s__Bacteroides_intestinalis annotation K:B. intestinalis
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Eubacteriaceae.g__Eubacterium annotation Eubacterium
+p__Verrucomicrobia.c__Verrucomicrobiae.o__Verrucomicrobiales annotation Verrucomicrobiales
+p__Verrucomicrobia.c__Verrucomicrobiae.o__Verrucomicrobiales annotation_font_size 7
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Rikenellaceae annotation Rikenell.
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Rikenellaceae annotation_font_size 6
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Bacteroidaceae.g__Bacteroides.s__Bacteroides_caccae annotation M:B. caccae
+p__Firmicutes.c__Negativicutes.o__Selenomonadales.f__Veillonellaceae.g__Dialister annotation Dialister
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Ruminococcaceae.g__Ruminococcus.s__Ruminococcus_bromii annotation bromii
+p__Proteobacteria.c__Betaproteobacteria.o__Burkholderiales.f__Sutterellaceae.g__Sutterella annotation Sutterella
+p__Proteobacteria.c__Betaproteobacteria annotation Betaproteobacteria
+p__Proteobacteria.c__Betaproteobacteria annotation_font_size 8
+p__Verrucomicrobia.c__Verrucomicrobiae.o__Verrucomicrobiales.f__Verrucomicrobiaceae.g__Akkermansia annotation Akkermansia
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Lachnospiraceae.g__Butyrivibrio annotation G2:Butyrivibrio
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Bacteroidaceae.g__Bacteroides.s__Bacteroides_finegoldii annotation fin.
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Eubacteriaceae.g__Eubacterium.s__Eubacterium_rectale annotation N:E. rectale
+p__Actinobacteria.c__Actinobacteria.o__Bifidobacteriales.f__Bifidobacteriaceae.g__Bifidobacterium.s__Bifidobacterium_adolescentis annotation adolescentis
+p__Firmicutes.c__Negativicutes.o__Selenomonadales.f__Veillonellaceae.g__Dialister.s__Dialister_invisus annotation invisus
+p__Firmicutes.c__Clostridia annotation Clostridia
+p__Firmicutes.c__Clostridia annotation_font_size 8
+p__Proteobacteria.c__Betaproteobacteria.o__Burkholderiales.f__Sutterellaceae.g__Sutterella.s__Sutterella_wadsworthensis annotation wadsworthensis
+p__Proteobacteria.c__Gammaproteobacteria.o__Enterobacteriales annotation Enterobacteriales
+p__Proteobacteria.c__Gammaproteobacteria.o__Enterobacteriales annotation_font_size 7
+p__Firmicutes.c__Negativicutes.o__Selenomonadales annotation Selenomonadales
+p__Firmicutes.c__Negativicutes.o__Selenomonadales annotation_font_size 7
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Eubacteriaceae.g__Eubacterium.s__Eubacterium_siraeum annotation sir.
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Ruminococcaceae annotation Ruminococcaceae
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Ruminococcaceae annotation_font_size 6
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Porphyromonadaceae.g__Odoribacter annotation G1:Odoribacter
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Bacteroidaceae.g__Bacteroides.s__Bacteroides_uniformis annotation G:B. uniformis
+p__Proteobacteria.c__Gammaproteobacteria.o__Enterobacteriales.f__Enterobacteriaceae annotation Enterobacteriaceae
+p__Proteobacteria.c__Gammaproteobacteria.o__Enterobacteriales.f__Enterobacteriaceae annotation_font_size 6
+p__Actinobacteria.c__Actinobacteria.o__Bifidobacteriales.f__Bifidobacteriaceae.g__Bifidobacterium annotation Bifidobacterium
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Ruminococcaceae.g__Faecalibacterium annotation Faecalinbact.
+p__Actinobacteria.c__Actinobacteria annotation Actinobacteria
+p__Actinobacteria.c__Actinobacteria annotation_font_size 8
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Rikenellaceae.g__Alistipes.s__Alistipes_putredinis annotation putr.
+p__Verrucomicrobia.c__Verrucomicrobiae.o__Verrucomicrobiales.f__Verrucomicrobiaceae.g__Akkermansia.s__Akkermansia_muciniphila annotation muciniphila
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Rikenellaceae.g__Alistipes.s__Alistipes_shahii annotation sh.
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Lachnospiraceae.g__Roseburia annotation G3:Roseburia
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Porphyromonadaceae.g__Parabacteroides annotation Parabact.
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Lachnospiraceae.g__Roseburia.s__Roseburia_inulinivorans annotation P:R. inulinivorans
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Bacteroidaceae.g__Bacteroides.s__Bacteroides_stercoris annotation F:B. stercoris
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Bacteroidaceae.g__Bacteroides.s__Bacteroides_cellulosilyticus annotation L:B. cellulosilyticus
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Eubacteriaceae.g__Eubacterium.s__Eubacterium_eligens annotation el.
+p__Firmicutes.c__Negativicutes.o__Selenomonadales.f__Veillonellaceae annotation Veillonellaceae
+p__Firmicutes.c__Negativicutes.o__Selenomonadales.f__Veillonellaceae annotation_font_size 6
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Bacteroidaceae.g__Bacteroides annotation Bacteroides
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Bacteroidaceae.g__Bacteroides.s__Bacteroides_unclassified annotation C:B. unclassified
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Clostridiaceae annotation Clostridiaceae
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Clostridiaceae annotation_font_size 6
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales annotation Bacteroidales
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales annotation_font_size 7
+p__Bacteroidetes.c__Bacteroidia annotation Bacteroidia
+p__Bacteroidetes.c__Bacteroidia annotation_font_size 8
+p__Firmicutes.c__Negativicutes.o__Selenomonadales.f__Acidaminococcaceae.g__Phascolarctobacterium annotation Phascolarctobacterium
+p__Firmicutes.c__Negativicutes.o__Selenomonadales.f__Acidaminococcaceae annotation Acidamin.
+p__Firmicutes.c__Negativicutes.o__Selenomonadales.f__Acidaminococcaceae annotation_font_size 6
+p__Firmicutes.c__Negativicutes.o__Selenomonadales.f__Acidaminococcaceae.g__Phascolarctobacterium.s__Phascolarctobacterium_unclassified annotation uncl.
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Bacteroidaceae annotation Bacteroidaceae
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Bacteroidaceae annotation_font_size 6
+p__Proteobacteria.c__Betaproteobacteria.o__Burkholderiales annotation Burkholderiales
+p__Proteobacteria.c__Betaproteobacteria.o__Burkholderiales annotation_font_size 7
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Bacteroidaceae.g__Bacteroides.s__Bacteroides_eggerthii annotation J:B. eggerthii
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Bacteroidaceae.g__Bacteroides.s__Bacteroides_thetaiotaomicron annotation E:B. thetaiotaomicron
+p__Verrucomicrobia.c__Verrucomicrobiae annotation Verrucomicrobiae
+p__Verrucomicrobia.c__Verrucomicrobiae annotation_font_size 8
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Bacteroidaceae.g__Bacteroides.s__Bacteroides_plebeius annotation D:B. plebeius
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Porphyromonadaceae.g__Odoribacter.s__Odoribacter_splanchnicus annotation A:O. splanchnicus
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Prevotellaceae.g__Prevotella.s__Prevotella_copri annotation copri
+p__Actinobacteria.c__Actinobacteria.o__Bifidobacteriales annotation Bifidobact.
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Porphyromonadaceae.g__Parabacteroides.s__Parabacteroides_merdae annotation merdae
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Lachnospiraceae.g__Dorea annotation Dorea
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Bacteroidaceae.g__Bacteroides.s__Bacteroides_dorei annotation dorei
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Bacteroidaceae.g__Bacteroides.s__Bacteroides_ovatus annotation H:B. ovatus
diff --git a/examples/gut_microbiome/gut_microbiome.txt b/examples/gut_microbiome/gut_microbiome.txt
new file mode 100644
index 0000000..e1c0fe8
--- /dev/null
+++ b/examples/gut_microbiome/gut_microbiome.txt
@@ -0,0 +1,290 @@
+p__Actinobacteria.c__Actinobacteria asds
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Clostridiales_Family_XI_Incertae_Sedis.g__Anaerococcus.s__Anaerococcus_unclassified
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Bacteroidaceae.g__Bacteroides.s__Bacteroides_salanitronis
+p__Proteobacteria.c__Gammaproteobacteria.o__Enterobacteriales.f__Enterobacteriaceae.g__Escherichia.s__Escherichia_coli
+p__Actinobacteria.c__Actinobacteria.o__Bifidobacteriales.f__Bifidobacteriaceae.g__Bifidobacterium
+p__Firmicutes.c__Bacilli.o__Lactobacillales.f__Streptococcaceae.g__Streptococcus.s__Streptococcus_salivarius
+p__Actinobacteria
+p__Firmicutes.c__Bacilli.o__Lactobacillales.f__Lactobacillaceae.g__Lactobacillus.s__Lactobacillus_salivarius
+p__Firmicutes.c__Erysipelotrichi.o__Erysipelotrichales.f__Erysipelotrichaceae.g__Turicibacter
+p__Proteobacteria.c__Alphaproteobacteria
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Bacteroidaceae.g__Bacteroides.s__Bacteroides_plebeius
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Porphyromonadaceae.g__Odoribacter.s__Odoribacter_splanchnicus
+p__Verrucomicrobia.c__Verrucomicrobiae.o__Verrucomicrobiales.f__Verrucomicrobiaceae.g__Akkermansia
+p__Actinobacteria.c__Actinobacteria.o__Coriobacteriales.f__Coriobacteriaceae.g__Collinsella.s__Collinsella_intestinalis
+p__Verrucomicrobia.c__Verrucomicrobiae
+p__Proteobacteria.c__Gammaproteobacteria.o__Enterobacteriales.f__Enterobacteriaceae.g__Shigella.s__Shigella_boydii
+p__Firmicutes.c__Erysipelotrichi
+p__Proteobacteria.c__Gammaproteobacteria.o__Pasteurellales
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Porphyromonadaceae.g__Parabacteroides.s__Parabacteroides_merdae
+p__Proteobacteria.c__Deltaproteobacteria.o__Desulfovibrionales.f__Desulfovibrionaceae.g__Bilophila.s__Bilophila_wadsworthia
+p__Fusobacteria.c__Fusobacteria.o__Leptotrichales.f__Leptotrichales_unclassified
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Ruminococcaceae.g__Ruminococcus
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Ruminococcaceae.g__Anaerotruncus
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Lachnospiraceae.g__Coprococcus
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Eubacteriaceae
+p__Cyanobacteria.c__Cyanophyceae.o__Synechococcales.f__Synechococcaceae
+p__Proteobacteria.c__Gammaproteobacteria
+p__Firmicutes.c__Bacilli.o__Lactobacillales.f__Lactobacillaceae.g__Pediococcus
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Prevotellaceae
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Eubacteriaceae.g__Eubacterium
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Eubacteriaceae.g__Eubacterium.s__Eubacterium_hallii
+p__Proteobacteria.c__Gammaproteobacteria.o__Pseudomonadales.f__Moraxellaceae
+p__Proteobacteria.c__Epsilonproteobacteria.o__Campylobacterales.f__Campylobacteraceae
+p__Firmicutes.c__Bacilli.o__Lactobacillales.f__Streptococcaceae
+p__Proteobacteria.c__Gammaproteobacteria.o__Enterobacteriales.f__Enterobacteriaceae.g__Salmonella.s__Salmonella_enterica
+p__Bacteroidetes
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Ruminococcaceae.g__Ruminococcus.s__Ruminococcus_torques
+p__Firmicutes.c__Negativicutes.o__Selenomonadales.f__Veillonellaceae.g__Veillonella.s__Veillonella_atypica
+p__Firmicutes.c__Erysipelotrichi.o__Erysipelotrichales.f__Erysipelotrichaceae.g__Catenibacterium.s__Catenibacterium_mitsuokai
+p__Firmicutes.c__Negativicutes.o__Selenomonadales.f__Veillonellaceae.g__Megamonas.s__Megamonas_hypermegale
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Ruminococcaceae.g__Faecalibacterium.s__Faecalibacterium_cf
+p__Cyanobacteria.c__Cyanophyceae.o__Nostocales.f__Nostocaceae
+p__Firmicutes.c__Negativicutes.o__Selenomonadales.f__Veillonellaceae.g__Megamonas
+p__Actinobacteria.c__Actinobacteria.o__Bifidobacteriales.f__Bifidobacteriaceae.g__Bifidobacterium.s__Bifidobacterium_bifidum
+p__Bacteroidetes.c__Sphingobacteria.o__Sphingobacteriales.f__Sphingobacteriaceae
+p__Cyanobacteria.c__Cyanophyceae
+p__Fusobacteria
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Lachnospiraceae.g__Coprococcus.s__Coprococcus_comes
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Clostridiaceae.g__Clostridium.s__Clostridium_cf
+p__Bacteroidetes.c__Flavobacteria.o__Flavobacteriales.f__Flavobacteriaceae.g__Polaribacter.s__Polaribacter_unclassified
+p__Actinobacteria.c__Actinobacteria.o__Bifidobacteriales
+p__Actinobacteria.c__Actinobacteria.o__Bifidobacteriales.f__Bifidobacteriaceae.g__Bifidobacterium.s__Bifidobacterium_adolescentis
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Eubacteriaceae.g__Eubacterium.s__Eubacterium_rectale
+p__Proteobacteria.c__Deltaproteobacteria.o__Desulfovibrionales.f__Desulfovibrionaceae.g__Bilophila
+p__Actinobacteria.c__Actinobacteria.o__Coriobacteriales.f__Coriobacteriaceae.g__Gordonibacter
+p__Proteobacteria.c__Deltaproteobacteria.o__Desulfobacterales.f__Desulfobulbaceae.g__Desulfobulbaceae_unclassified
+p__Proteobacteria.c__Gammaproteobacteria.o__Enterobacteriales.f__Enterobacteriaceae.g__Klebsiella.s__Klebsiella_pneumoniae
+p__Proteobacteria.c__Gammaproteobacteria.o__Enterobacteriales.f__Enterobacteriaceae.g__Salmonella
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Lachnospiraceae.g__Dorea.s__Dorea_unclassified
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Ruminococcaceae.g__Ruminococcus.s__Ruminococcus_gnavus
+p__Proteobacteria.c__Gammaproteobacteria.o__Alteromonadales.f__Psychromonadaceae
+p__Proteobacteria.c__Gammaproteobacteria.o__Pseudomonadales.f__Moraxellaceae.g__Acinetobacter
+p__Firmicutes.c__Negativicutes.o__Selenomonadales.f__Acidaminococcaceae.g__Acidaminococcus
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Ruminococcaceae.g__Ruminococcus.s__Ruminococcus_obeum
+p__Proteobacteria.c__Betaproteobacteria.o__Burkholderiales.f__Sutterellaceae.g__Sutterella.s__Sutterella_wadsworthensis
+p__Proteobacteria.c__Betaproteobacteria.o__Nitrosomonadales
+p__Proteobacteria.c__Gammaproteobacteria.o__Enterobacteriales.f__Enterobacteriaceae.g__Shigella.s__Shigella_flexneri
+p__Actinobacteria.c__Actinobacteria.o__Coriobacteriales.f__Coriobacteriaceae.g__Collinsella.s__Collinsella_stercoris
+p__Bacteroidetes.c__Sphingobacteria.o__Sphingobacteriales.f__Sphingobacteriaceae.g__Sphingobacteriaceae_unclassified
+p__Fusobacteria.c__Fusobacteria.o__Fusobacteriales.f__Fusobacteriaceae
+p__Proteobacteria.c__Gammaproteobacteria.o__Pseudomonadales.f__Pseudomonadaceae
+p__Actinobacteria.c__Actinobacteria.o__Coriobacteriales.f__Coriobacteriaceae.g__Collinsella.s__Collinsella_aerofaciens
+p__Firmicutes.c__Bacilli.o__Lactobacillales
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Porphyromonadaceae.g__Parabacteroides.s__Parabacteroides_johnsonii
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Lachnospiraceae.g__Anaerostipes.s__Anaerostipes_caccae
+p__Firmicutes.c__Bacilli.o__Lactobacillales.f__Streptococcaceae.g__Lactococcus.s__Lactococcus_lactis
+p__Proteobacteria.c__Betaproteobacteria.o__Nitrosomonadales.f__Nitrosomonadaceae.g__Nitrosomonadaceae_unclassified
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Clostridiaceae.g__Clostridium.s__Clostridium_asparagiforme
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Bacteroidaceae
+p__Proteobacteria.c__Gammaproteobacteria.o__Pseudomonadales.f__Pseudomonadaceae.g__Pseudomonas.s__Pseudomonas_unclassified
+p__Lentisphaerae.c__Lentisphaerae_uncl.o__Victivallales.f__Victivallaceae
+p__Firmicutes.c__Negativicutes.o__Selenomonadales.f__Veillonellaceae
+k__Archaea
+p__Proteobacteria.c__Deltaproteobacteria.o__Desulfovibrionales.f__Desulfovibrionaceae.g__Desulfovibrio
+p__Firmicutes.c__Negativicutes.o__Selenomonadales.f__Veillonellaceae.g__Megasphaera
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Lachnospiraceae.g__Dorea.s__Dorea_longicatena
+p__Firmicutes.c__Negativicutes.o__Selenomonadales.f__Veillonellaceae.g__Dialister.s__Dialister_invisus
+p__Proteobacteria.c__Gammaproteobacteria.o__Aeromonadales.f__Succinivibrionaceae.g__Succinatimonas
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Clostridiaceae
+p__Lentisphaerae.c__Lentisphaerae_uncl.o__Victivallales.f__Victivallaceae.g__Victivallis.s__Victivallis_vadensis
+p__Proteobacteria.c__Gammaproteobacteria.o__Enterobacteriales.f__Enterobacteriaceae.g__Klebsiella
+p__Actinobacteria.c__Actinobacteria.o__Coriobacteriales.f__Coriobacteriaceae
+p__Cyanobacteria.c__Cyanophyceae.o__Nostocales
+p__Firmicutes.c__Negativicutes
+p__Proteobacteria.c__Deltaproteobacteria.o__Desulfovibrionales.f__Desulfovibrionaceae.g__Desulfovibrio.s__Desulfovibrio_piger
+p__Firmicutes
+p__Fusobacteria.c__Fusobacteria.o__Fusobacteriales.f__Fusobacteriaceae.g__Fusobacterium
+p__Proteobacteria.c__Gammaproteobacteria.o__Pseudomonadales.f__Moraxellaceae.g__Acinetobacter.s__Acinetobacter_lwoffii
+p__Actinobacteria.c__Actinobacteria.o__Coriobacteriales
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Bacteroidaceae.g__Bacteroides.s__Bacteroides_pectinophilus
+p__Euryarchaeota.c__Methanobacteria.o__Methanobacteriales.f__Methanobacteriaceae.g__Methanobrevibacter
+p__Firmicutes.c__Erysipelotrichi.o__Erysipelotrichales.f__Erysipelotrichaceae
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Bacteroidaceae.g__Bacteroides
+p__Firmicutes.c__Bacilli.o__Lactobacillales.f__Streptococcaceae.g__Streptococcus.s__Streptococcus_anginosus
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Bacteroidaceae.g__Bacteroides.s__Bacteroides_eggerthii
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Clostridiaceae.g__Clostridium.s__Clostridium_leptum
+p__Proteobacteria.c__Gammaproteobacteria.o__Pasteurellales.f__Pasteurellaceae.g__Haemophilus
+p__Firmicutes.c__Bacilli.o__Lactobacillales.f__Lactobacillaceae.g__Lactobacillus.s__Lactobacillus_ruminis
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Bacteroidaceae.g__Bacteroides.s__Bacteroides_stercoris
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Bacteroidaceae.g__Bacteroides.s__Bacteroides_coprophilus
+p__Proteobacteria.c__Alphaproteobacteria.o__Rickettsiales
+p__Verrucomicrobia
+p__Firmicutes.c__Erysipelotrichi.o__Erysipelotrichales.f__Erysipelotrichaceae.g__Coprobacillus.s__Coprobacillus_bacterium
+p__Bacteroidetes.c__Flavobacteria.o__Flavobacteriales.f__Flavobacteriaceae.g__Flavobacterium
+p__Proteobacteria.c__Gammaproteobacteria.o__Aeromonadales.f__Succinivibrionaceae.g__Succinatimonas.s__Succinatimonas_hippei
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Ruminococcaceae.g__Ruminococcus.s__Ruminococcus_flavefaciens
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Bacteroidaceae.g__Bacteroides.s__Bacteroides_finegoldii
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Lachnospiraceae.g__Roseburia.s__Roseburia_intestinalis
+p__Firmicutes.c__Negativicutes.o__Selenomonadales.f__Veillonellaceae.g__Mitsuokella.s__Mitsuokella_multacida
+p__Firmicutes.c__Negativicutes.o__Selenomonadales.f__Acidaminococcaceae
+p__Bacteroidetes.c__Sphingobacteria
+p__Actinobacteria.c__Actinobacteria.o__Bifidobacteriales.f__Bifidobacteriaceae.g__Bifidobacterium.s__Bifidobacterium_pseudocatenulatum
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Bacteroidaceae.g__Bacteroides.s__Bacteroides_caccae
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Lachnospiraceae.g__Coprococcus.s__Coprococcus_catus
+p__Proteobacteria.c__Gammaproteobacteria.o__Enterobacteriales.f__Enterobacteriaceae.g__Escherichia.s__Escherichia_unclassified
+p__Firmicutes.c__Bacilli.o__Lactobacillales.f__Lactobacillaceae.g__Lactobacillus
+k__Bacteria
+p__Proteobacteria.c__Gammaproteobacteria.o__Alteromonadales.f__Psychromonadaceae.g__Psychromonas.s__Psychromonas_unclassified
+p__Chlamydiae.c__Chlamydiae
+p__Euryarchaeota.c__Methanobacteria.o__Methanobacteriales.f__Methanobacteriaceae
+p__Actinobacteria.c__Actinobacteria.o__Bifidobacteriales.f__Bifidobacteriaceae
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Ruminococcaceae.g__Faecalibacterium
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Prevotellaceae.g__Prevotella.s__Prevotella_timonensis
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Porphyromonadaceae.g__Parabacteroides.s__Parabacteroides_unclassified
+p__Proteobacteria.c__Gammaproteobacteria.o__Pseudomonadales
+p__Verrucomicrobia.c__Verrucomicrobiae.o__Verrucomicrobiales
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Ruminococcaceae.g__Ruminococcus.s__Ruminococcus_bromii
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Eubacteriaceae.g__Eubacterium.s__Eubacterium_ventriosum
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Ruminococcaceae.g__Faecalibacterium.s__Faecalibacterium_prausnitzii
+p__Proteobacteria.c__Gammaproteobacteria.o__Aeromonadales
+p__Fusobacteria.c__Fusobacteria.o__Leptotrichales
+p__Bacteroidetes.c__Flavobacteria.o__Flavobacteriales.f__Flavobacteriaceae.g__Flavobacterium.s__Flavobacterium_unclassified
+p__Proteobacteria.c__Gammaproteobacteria.o__Enterobacteriales.f__Enterobacteriaceae.g__Shigella
+p__Proteobacteria.c__Gammaproteobacteria.o__Alteromonadales.f__Psychromonadaceae.g__Psychromonas
+p__Firmicutes.c__Clostridia.o__Clostridiales
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Ruminococcaceae.g__Subdoligranulum.s__Subdoligranulum_variabile
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Bacteroidaceae.g__Bacteroides.s__Bacteroides_coprocola
+p__Firmicutes.c__Negativicutes.o__Selenomonadales.f__Acidaminococcaceae.g__Phascolarctobacterium.s__Phascolarctobacterium_unclassified
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Clostridiales_Family_XI_Incertae_Sedis.g__Anaerococcus
+p__Bacteroidetes.c__Bacteroidia
+p__Proteobacteria.c__Betaproteobacteria.o__Burkholderiales.f__Sutterellaceae
+p__Firmicutes.c__Erysipelotrichi.o__Erysipelotrichales.f__Erysipelotrichaceae.g__Catenibacterium
+p__Proteobacteria.c__Epsilonproteobacteria.o__Campylobacterales
+p__Firmicutes.c__Bacilli.o__Lactobacillales.f__Lactobacillaceae.g__Pediococcus.s__Pediococcus_pentosaceus
+p__Lentisphaerae.c__Lentisphaerae_uncl.o__Victivallales.f__Victivallaceae.g__Victivallis
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Clostridiaceae.g__Clostridium.s__Clostridium_hathewayi
+p__Fusobacteria.c__Fusobacteria.o__Fusobacteriales.f__Fusobacteriaceae.g__Fusobacterium.s__Fusobacterium_mortiferum
+p__Proteobacteria.c__Alphaproteobacteria.o__Rhodospirillales
+p__Firmicutes.c__Bacilli.o__Lactobacillales.f__Enterococcaceae
+p__Fusobacteria.c__Fusobacteria
+p__Proteobacteria.c__Alphaproteobacteria.o__Rhizobiales
+p__Firmicutes.c__Negativicutes.o__Selenomonadales.f__Veillonellaceae.g__Dialister
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Porphyromonadaceae.g__Parabacteroides
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Clostridiaceae.g__Clostridium.s__Clostridium_symbiosum
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Ruminococcaceae.g__Ruminococcus.s__Ruminococcus_lactaris
+p__Fusobacteria.c__Fusobacteria.o__Fusobacteriales
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Bacteroidaceae.g__Bacteroides.s__Bacteroides_uniformis
+p__Firmicutes.c__Negativicutes.o__Selenomonadales.f__Veillonellaceae.g__Mitsuokella
+p__Proteobacteria.c__Gammaproteobacteria.o__Enterobacteriales.f__Enterobacteriaceae.g__Escherichia
+p__Proteobacteria.c__Epsilonproteobacteria.o__Campylobacterales.f__Campylobacteraceae.g__Campylobacter
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Clostridiales_Family_XI_Incertae_Sedis.g__Peptoniphilus.s__Peptoniphilus_unclassified
+p__Lentisphaerae.c__Lentisphaerae_uncl.o__Victivallales
+p__Proteobacteria.c__Gammaproteobacteria.o__Alteromonadales
+p__Bacteroidetes.c__Flavobacteria.o__Flavobacteriales.f__Flavobacteriaceae
+p__Chlamydiae
+p__Lentisphaerae.c__Lentisphaerae_uncl
+p__Bacteroidetes.c__Sphingobacteria.o__Sphingobacteriales
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Porphyromonadaceae.g__Parabacteroides.s__Parabacteroides_distasonis
+p__Proteobacteria
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Prevotellaceae.g__Prevotella.s__Prevotella_amnii
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Lachnospiraceae.g__Butyrivibrio
+p__Actinobacteria.c__Actinobacteria.o__Bifidobacteriales.f__Bifidobacteriaceae.g__Bifidobacterium.s__Bifidobacterium_longum
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Lachnospiraceae.g__Butyrivibrio.s__Butyrivibrio_crossotus
+p__Proteobacteria.c__Betaproteobacteria.o__Nitrosomonadales.f__Nitrosomonadaceae
+p__Firmicutes.c__Clostridia
+p__Proteobacteria.c__Gammaproteobacteria.o__Enterobacteriales.f__Enterobacteriaceae
+p__Chlamydiae.c__Chlamydiae.o__Chlamydiales.f__Chlamydiaceae
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Bacteroidaceae.g__Bacteroides.s__Bacteroides_cellulosilyticus
+p__Bacteroidetes.c__Flavobacteria.o__Flavobacteriales
+p__Lentisphaerae
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Clostridiaceae.g__Clostridium.s__Clostridium_nexile
+p__Euryarchaeota.c__Methanobacteria
+p__Bacteroidetes.c__Flavobacteria.o__Flavobacteriales.f__Flavobacteriaceae.g__Polaribacter
+p__Firmicutes.c__Negativicutes.o__Selenomonadales.f__Acidaminococcaceae.g__Acidaminococcaceae_unclassified
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Lachnospiraceae
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Prevotellaceae.g__Prevotella.s__Prevotella_disiens
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Clostridiales_uncl.g__Blautia.s__Blautia_unclassified
+p__Cyanobacteria.c__Cyanophyceae.o__Synechococcales.f__Synechococcaceae.g__Prochlorococcus
+p__Proteobacteria.c__Gammaproteobacteria.o__Enterobacteriales
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Prevotellaceae.g__Prevotella.s__Prevotella_bergensis
+p__Euryarchaeota
+p__Cyanobacteria.c__Cyanophyceae.o__Synechococcales
+p__Chlamydiae.c__Chlamydiae.o__Chlamydiales
+p__Firmicutes.c__Negativicutes.o__Selenomonadales.f__Veillonellaceae.g__Megasphaera.s__Megasphaera_unclassified
+p__Proteobacteria.c__Alphaproteobacteria.o__Rhizobiales.f__Aurantimonadaceae
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Ruminococcaceae.g__Anaerotruncus.s__Anaerotruncus_colihominis
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Bacteroidaceae.g__Bacteroides.s__Bacteroides_intestinalis
+p__Firmicutes.c__Bacilli.o__Lactobacillales.f__Streptococcaceae.g__Streptococcus
+p__Proteobacteria.c__Deltaproteobacteria.o__Desulfovibrionales
+p__Proteobacteria.c__Epsilonproteobacteria
+p__Firmicutes.c__Negativicutes.o__Selenomonadales.f__Acidaminococcaceae.g__Acidaminococcus.s__Acidaminococcus_fermentans
+p__Firmicutes.c__Negativicutes.o__Selenomonadales
+p__Actinobacteria.c__Actinobacteria.o__Coriobacteriales.f__Coriobacteriaceae.g__Gordonibacter.s__Gordonibacter_pamelaeae
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Porphyromonadaceae.g__Odoribacter
+p__Firmicutes.c__Erysipelotrichi.o__Erysipelotrichales.f__Erysipelotrichaceae.g__Coprobacillus
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Bacteroidaceae.g__Bacteroides.s__Bacteroides_dorei
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Bacteroidaceae.g__Bacteroides.s__Bacteroides_thetaiotaomicron
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Rikenellaceae.g__Alistipes
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Ruminococcaceae.g__Faecalibacterium.s__Faecalibacterium_unclassified
+p__Proteobacteria.c__Alphaproteobacteria.o__Rhizobiales.f__Aurantimonadaceae.g__Aurantimonadaceae_unclassified
+p__Proteobacteria.c__Deltaproteobacteria.o__Desulfovibrionales.f__Desulfovibrionaceae.g__Desulfovibrio.s__Desulfovibrio_desulfuricans
+p__Proteobacteria.c__Deltaproteobacteria.o__Desulfovibrionales.f__Desulfovibrionaceae
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Prevotellaceae.g__Prevotella.s__Prevotella_copri
+p__Proteobacteria.c__Betaproteobacteria.o__Burkholderiales.f__Sutterellaceae.g__Sutterella
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Rikenellaceae.g__Alistipes.s__Alistipes_shahii
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Rikenellaceae.g__Alistipes.s__Alistipes_putredinis
+p__Firmicutes.c__Bacilli.o__Lactobacillales.f__Enterococcaceae.g__Enterococcus
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Lachnospiraceae.g__Anaerostipes
+p__Proteobacteria.c__Gammaproteobacteria.o__Pseudomonadales.f__Pseudomonadaceae.g__Pseudomonas
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Bacteroidaceae.g__Bacteroides.s__Bacteroides_xylanisolvens
+p__Proteobacteria.c__Gammaproteobacteria.o__Pasteurellales.f__Pasteurellaceae
+p__Cyanobacteria
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Ruminococcaceae.g__Ruminococcus.s__Ruminococcus_albus
+p__Firmicutes.c__Bacilli.o__Lactobacillales.f__Streptococcaceae.g__Streptococcus.s__Streptococcus_parasanguinis
+p__Firmicutes.c__Negativicutes.o__Selenomonadales.f__Acidaminococcaceae.g__Acidaminococcus.s__Acidaminococcus_unclassified
+p__Proteobacteria.c__Deltaproteobacteria.o__Desulfobacterales
+p__Firmicutes.c__Bacilli.o__Lactobacillales.f__Lactobacillaceae
+p__Proteobacteria.c__Gammaproteobacteria.o__Pasteurellales.f__Pasteurellaceae.g__Haemophilus.s__Haemophilus_parainfluenzae
+p__Bacteroidetes.c__Flavobacteria
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Ruminococcaceae
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Clostridiales_uncl
+p__Proteobacteria.c__Alphaproteobacteria.o__Rhodospirillales.f__Acetobacteraceae.g__Acetobacteraceae_unclassified
+p__Firmicutes.c__Erysipelotrichi.o__Erysipelotrichales
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Rikenellaceae
+p__Firmicutes.c__Erysipelotrichi.o__Erysipelotrichales.f__Erysipelotrichaceae.g__Coprobacillus.s__Coprobacillus_unclassified
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Clostridiaceae.g__Clostridium.s__Clostridium_bolteae
+p__Firmicutes.c__Negativicutes.o__Selenomonadales.f__Veillonellaceae.g__Veillonella
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Bacteroidaceae.g__Bacteroides.s__Bacteroides_ovatus
+p__Firmicutes.c__Negativicutes.o__Selenomonadales.f__Acidaminococcaceae.g__Phascolarctobacterium
+p__Proteobacteria.c__Betaproteobacteria
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Eubacteriaceae.g__Eubacterium.s__Eubacterium_eligens
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Lachnospiraceae.g__Dorea
+p__Actinobacteria.c__Actinobacteria.o__Bifidobacteriales.f__Bifidobacteriaceae.g__Bifidobacterium.s__Bifidobacterium_catenulatum
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Prevotellaceae.g__Prevotella
+p__Chlamydiae.c__Chlamydiae.o__Chlamydiales.f__Chlamydiaceae.g__Chlamydiaceae_unclassified
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Porphyromonadaceae
+p__Firmicutes.c__Bacilli.o__Lactobacillales.f__Streptococcaceae.g__Lactococcus
+p__Firmicutes.c__Bacilli.o__Lactobacillales.f__Streptococcaceae.g__Streptococcus.s__Streptococcus_vestibularis
+p__Proteobacteria.c__Deltaproteobacteria.o__Desulfobacterales.f__Desulfobulbaceae
+p__Proteobacteria.c__Alphaproteobacteria.o__Rhodospirillales.f__Acetobacteraceae
+p__Verrucomicrobia.c__Verrucomicrobiae.o__Verrucomicrobiales.f__Verrucomicrobiaceae.g__Akkermansia.s__Akkermansia_muciniphila
+p__Firmicutes.c__Bacilli
+p__Proteobacteria.c__Epsilonproteobacteria.o__Campylobacterales.f__Campylobacteraceae.g__Campylobacter.s__Campylobacter_hominis
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Lachnospiraceae.g__Coprococcus.s__Coprococcus_eutactus
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Clostridiales_uncl.g__Blautia
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Clostridiales_Family_XI_Incertae_Sedis
+p__Actinobacteria.c__Actinobacteria.o__Coriobacteriales.f__Coriobacteriaceae.g__Collinsella
+p__Cyanobacteria.c__Cyanophyceae.o__Synechococcales.f__Synechococcaceae.g__Prochlorococcus.s__Prochlorococcus_marinus
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Bacteroidaceae.g__Bacteroides.s__Bacteroides_vulgatus
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Lachnospiraceae.g__Roseburia.s__Roseburia_inulinivorans
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Bacteroidaceae.g__Bacteroides.s__Bacteroides_fragilis
+p__Verrucomicrobia.c__Verrucomicrobiae.o__Verrucomicrobiales.f__Verrucomicrobiaceae
+p__Proteobacteria.c__Betaproteobacteria.o__Burkholderiales
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Porphyromonadaceae.g__Porphyromonas
+p__Proteobacteria.c__Gammaproteobacteria.o__Aeromonadales.f__Succinivibrionaceae
+p__Euryarchaeota.c__Methanobacteria.o__Methanobacteriales.f__Methanobacteriaceae.g__Methanobrevibacter.s__Methanobrevibacter_smithii
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Clostridiaceae.g__Clostridium
+p__Firmicutes.c__Erysipelotrichi.o__Erysipelotrichales.f__Erysipelotrichaceae.g__Turicibacter.s__Turicibacter_unclassified
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Lachnospiraceae.g__Roseburia
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Ruminococcaceae.g__Subdoligranulum
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Bacteroidaceae.g__Bacteroides.s__Bacteroides_unclassified
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Lachnospiraceae.g__Dorea.s__Dorea_formicigenerans
+p__Proteobacteria.c__Deltaproteobacteria
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Clostridiales_Family_XI_Incertae_Sedis.g__Peptoniphilus
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Eubacteriaceae.g__Eubacterium.s__Eubacterium_siraeum
+p__Firmicutes.c__Clostridia.o__Clostridiales.f__Clostridiaceae.g__Clostridium.s__Clostridium_bartlettii
+p__Bacteroidetes.c__Bacteroidia.o__Bacteroidales.f__Rikenellaceae.g__Alistipes.s__Alistipes_unclassified
+p__Euryarchaeota.c__Methanobacteria.o__Methanobacteriales
+p__Firmicutes.c__Negativicutes.o__Selenomonadales.f__Veillonellaceae.g__Veillonella.s__Veillonella_parvula
diff --git a/examples/gut_microbiome/run.sh b/examples/gut_microbiome/run.sh
new file mode 100755
index 0000000..86c0924
--- /dev/null
+++ b/examples/gut_microbiome/run.sh
@@ -0,0 +1,3 @@
+#!/bin/sh
+graphlan_annotate.py gut_microbiome.txt gut_microbiome.annot.xml --annot annot.txt
+graphlan.py gut_microbiome.annot.xml gut_microbiome.png --dpi 300 --size 4.5 --pad 0
diff --git a/examples/hmp_metahit/PIPELINE.sh b/examples/hmp_metahit/PIPELINE.sh
new file mode 100755
index 0000000..f914817
--- /dev/null
+++ b/examples/hmp_metahit/PIPELINE.sh
@@ -0,0 +1,106 @@
+# !/bin/bash
+
+########################################################################################################################
+# The following lines of code contains all the steps for downloading the HMP and MetaHIT data, process it through #
+# MetaPhlAn2, merging the MetaPhlAn2 results into a single dataset, perform some string manipulation, process the data #
+# using LEfSe for biomarkers discovery, exploit the export2graphlan framework for generating the tree and the #
+# annotation file for GraPhlAn, and finally draw the image using GraPhlAn. #
+# For time reasons, we provide the two intermediate files: the clean merge of the two datasets (HMP & MetaHIT) and the #
+# results of LEfSE. #
+# If the user wants to test the complete pipeline, it is enough to uncommet all the commented part. #
+########################################################################################################################
+
+# # remove the generated files, if any
+# echo "Removing files"
+# rm -f merge.txt new-stool/* merge-good.txt merge-good-1.txt merge-good-2.txt merge-good-3.txt merge-very-good.txt \
+# merge-very-good.txt.in merge-very-good.txt.out tree.txt annot.txt outtree.txt outimg.png
+
+# # set MetaPhlAn2 directory
+# mpa_dir=`$HOME/metaphlan2`
+
+# # download samples
+# echo "Downloading HMP stool samples"
+# mkdir new-stool
+# cd new-stool/
+# for i in SRS011239 SRS013215 SRS013476 SRS014459 SRS015065 SRS056259 SRS058770 SRS062427 SRS063985 SRS015854 SRS016203 \
+# SRS016335 SRS017307 SRS017701 SRS018656 SRS019161 SRS019968 SRS020233 SRS020328 SRS022609 SRS023583 SRS024265 \
+# SRS047044 SRS052697 SRS053214 SRS015190 SRS015217 SRS015578 SRS015663 SRS016056 SRS016989 SRS017191 SRS017433 \
+# SRS018351 SRS018427 SRS018984 SRS019582 SRS019601 SRS022071 SRS022137 SRS024009 SRS024132 SRS024549 SRS024625 \
+# SRS043001 SRS045004 SRS045713 SRS050422 SRS050925 SRS051031 SRS011405 SRS011529 SRS011586 SRS012902 SRS014923 \
+# SRS055982 SRS011084 SRS011134 SRS011452 SRS013951 SRS014613 SRS014979 SRS054956 SRS057717 SRS058723 SRS064557 \
+# SRS064645 SRS065504 SRS015264 SRS015782 SRS015960 SRS016495 SRS016517 SRS017103 SRS018313 SRS018575 SRS019267 \
+# SRS019787 SRS019910 SRS020869 SRS021484 SRS023176 SRS023526 SRS023971 SRS024331 SRS024435 SRS048870 SRS049900 \
+# SRS049959 SRS049995 SRS050299 SRS050752 SRS052027 SRS011302 SRS012273 SRS013158 SRS014313 SRS015133 SRS053335 \
+# SRS054590 SRS063040 SRS077730 SRS078176 SRS015369 SRS015890 SRS016018 SRS016095 SRS016753 SRS016954 SRS017521 \
+# SRS017821 SRS018133 SRS019030 SRS019685 SRS022713 SRS023829 SRS024388 SRS042628 SRS047014 SRS048164 SRS049712 \
+# SRS051882 SRS011061 SRS011271 SRS013521 SRS013687 SRS013800 SRS014235 SRS014287 SRS014683 SRS053398 SRS056519 \
+# SRS057478 SRS064276 SRS075398 SRS015431 SRS015794 SRS016267 SRS016585 SRS017247 SRS018817 SRS019068 SRS019381 \
+# SRS019397 SRS021948 SRS022524 SRS023346 SRS023914 SRS024075 SRS042284 SRS043411 SRS043701 SRS045645 SRS049164; do
+
+# wget ftp://public-ftp.hmpdacc.org/Illumina/stool/${i}.tar.bz2 # download
+# tar jxf -d ${i}.tar.bz2 # decompress
+# cat ${i}/* > ${i}.fastq
+# metaphlan2.py ${i}.fastq --mpa_pkl ${mpa_dir}/db_v20/mpa_v20_m200.pkl --bowtie2db ${mpa_dir}/db_v20/mpa_v20_m200 \
+# --input_type fastq > ${i}.profile
+# done
+
+# echo "Downloading MetaHIT healthy stool samples"
+# for i in `cat ../metahit.txt`; do
+# s=`echo ${i} | cut -f1`
+# u=`echo ${i} | cut -f2`
+
+# for j in `echo ${u} | tr ';' '\n'`; do
+# f=`echo ${j} | cut -f6 -d'/'`
+# ff=`echo ${f} | cut -f1-2 -d'.'`
+
+# wget ftp://${j} # download
+# gunzip ${f} # decompress
+# cat ${ff} >> ${s}.fastq # cat forward and reverse
+# done
+
+# metaphlan2.py ${s}.fastq --mpa_pkl ${mpa_dir}/db_v20/mpa_v20_m200.pkl --bowtie2db ${mpa_dir}/db_v20/mpa_v20_m200 \
+# --input_type fastq > ${s}.profile
+# done
+# cd ../
+
+# # discard taxon rows in .profile files
+# echo "Removing \"t__\" from taxonomy"
+# for i in `ls new-stool/`; do
+# file=new-stool/${i}
+# grep -v t__ $file > $file.clean
+# done
+# rm -f new-stool/*.profile
+
+# # merge tables
+# echo "Merging tables"
+# merge_metaphlan_tables.py new-stool/* > merge.txt
+
+# # fix taxonomy
+# echo "Cleaning taxonomy"
+# sed 's/.__//g' merge.txt > merge-good.txt
+
+# # put the dataset information (e.g., HMP or MetaHIT)
+# # change "ID" with "dataset"
+# sed 's/ID/dataset/' merge-good.txt > merge-good-1.txt
+# # all "MH00*" must become "MetaHIT"
+# sed 's/MH00[0-9]*.profile/MetaHIT/g' merge-good-1.txt > merge-good-2.txt
+# # all "V1.CD-* must become "MetaHIT"
+# sed 's/V1.[A-Z]*-[0-9]*.profile/MetaHIT/g' merge-good-2.txt > merge-good-3.txt
+# # all "SRS*" must become "HMP"
+# sed 's/SRS[0-9]*.profile/HMP/g' merge-good-3.txt > merge-very-good.txt
+
+# # execute LEfSe
+# echo "Running LEfSe"
+# format_input.py merge-very-good.txt merge-very-good.txt.in -c 1 -o 1000000
+# run_lefse.py -l 3.0 merge-very-good.txt.in merge-very-good.txt.out
+
+# convert it!
+echo "Converting to GraPhlAn"
+export2graphlan.py -i merge-very-good.txt -o merge-very-good.txt.out -t tree.txt -a annot.txt \
+--title "MetaHIT vs. HMP (MetaPhlAn 2)" --max_clade_size 250 --min_clade_size 40 --annotations 5 \
+--external_annotations 6,7 --abundance_threshold 40.5 --fname_row 0 --ftop 200 --annotation_legend_font_size 11
+
+echo "Running Graphlan"
+graphlan_annotate.py --annot annot.txt tree.txt outtree.txt # attach annotation to the tree
+graphlan.py --dpi 300 --size 7.0 outtree.txt aaa.svg # generate the beautiful image
+
diff --git a/examples/hmp_metahit/merge-very-good.txt b/examples/hmp_metahit/merge-very-good.txt
new file mode 100644
index 0000000..fe85daa
--- /dev/null
+++ b/examples/hmp_metahit/merge-very-good.txt
@@ -0,0 +1,891 @@
+dataset MetaHIT MetaHIT MetaHIT MetaHIT MetaHIT MetaHIT MetaHIT MetaHIT MetaHIT MetaHIT MetaHIT MetaHIT MetaHIT MetaHIT MetaHIT MetaHIT MetaHIT MetaHIT MetaHIT MetaHIT MetaHIT MetaHIT MetaHIT MetaHIT MetaHIT MetaHIT MetaHIT MetaHIT MetaHIT MetaHIT MetaHIT MetaHIT MetaHIT MetaHIT MetaHIT MetaHIT MetaHIT MetaHIT MetaHIT MetaHIT MetaHIT MetaHIT MetaHIT MetaHIT MetaHIT MetaHIT MetaHIT MetaHIT MetaHIT MetaHIT MetaHIT MetaHIT MetaHIT MetaHIT MetaHIT MetaHIT MetaHIT MetaHIT MetaHIT MetaHIT Meta [...]
+Archaea 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.2722 0.0 4.02688 0.41449 0.0 0.06246 0.0 0.00236 0.0 0.0 0.0 0.0 0.12353 0.0 0.0 0.11491 0.51887 0.0 0.0 0.06228 0.11157 0.28774 0.00923 0.11188 0.0 0.07485 0.11284 0.0 0.0 0.00727 0.0 0.0 0.20208 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.10727 0.07591 0.16434 0.29587 0.10809 0.0 0.49139 0.0 0.04617 0.00345 0.65259 0.0 0.0 0.18231 0.0 1.24506 0.16815 0.0 0.0 0.0 0.13671 0.12809 0.0 0.0 0.0 0.14813 0.0 0.05149 0.02183 1.89886 0.0 0.33475 0.18193 0.0 0.0 0.0 0 [...]
+Archaea|Euryarchaeota 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.2722 0.0 4.02688 0.41449 0.0 0.06246 0.0 0.00236 0.0 0.0 0.0 0.0 0.12353 0.0 0.0 0.11491 0.51887 0.0 0.0 0.06228 0.11157 0.28774 0.00923 0.11188 0.0 0.07485 0.11284 0.0 0.0 0.00727 0.0 0.0 0.20208 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.10727 0.07591 0.16434 0.29587 0.10809 0.0 0.49139 0.0 0.04617 0.00345 0.65259 0.0 0.0 0.18231 0.0 1.24506 0.16815 0.0 0.0 0.0 0.13671 0.12809 0.0 0.0 0.0 0.14813 0.0 0.05149 0.02183 1.89886 0.0 0.33475 0.18193 [...]
+Archaea|Euryarchaeota|Methanobacteria 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.2722 0.0 4.0086 0.41449 0.0 0.06246 0.0 0.00236 0.0 0.0 0.0 0.0 0.12353 0.0 0.0 0.11491 0.51887 0.0 0.0 0.06228 0.1019 0.28774 0.00923 0.11188 0.0 0.07485 0.11284 0.0 0.0 0.00727 0.0 0.0 0.19758 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.10727 0.07591 0.16434 0.29587 0.10809 0.0 0.48711 0.0 0.04617 0.00345 0.64516 0.0 0.0 0.18231 0.0 1.23357 0.16815 0.0 0.0 0.0 0.13282 0.12809 0.0 0.0 0.0 0.14813 0.0 0.05149 0.02183 1.89886 0.0 0 [...]
+Archaea|Euryarchaeota|Methanobacteria|Methanobacteriales 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.2722 0.0 4.0086 0.41449 0.0 0.06246 0.0 0.00236 0.0 0.0 0.0 0.0 0.12353 0.0 0.0 0.11491 0.51887 0.0 0.0 0.06228 0.1019 0.28774 0.00923 0.11188 0.0 0.07485 0.11284 0.0 0.0 0.00727 0.0 0.0 0.19758 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.10727 0.07591 0.16434 0.29587 0.10809 0.0 0.48711 0.0 0.04617 0.00345 0.64516 0.0 0.0 0.18231 0.0 1.23357 0.16815 0.0 0.0 0.0 0.13282 0.12809 0.0 0.0 0.0 0.14813 0.0 0.05149 0. [...]
+Archaea|Euryarchaeota|Methanobacteria|Methanobacteriales|Methanobacteriaceae 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.2722 0.0 4.0086 0.41449 0.0 0.06246 0.0 0.00236 0.0 0.0 0.0 0.0 0.12353 0.0 0.0 0.11491 0.51887 0.0 0.0 0.06228 0.1019 0.28774 0.00923 0.11188 0.0 0.07485 0.11284 0.0 0.0 0.00727 0.0 0.0 0.19758 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.10727 0.07591 0.16434 0.29587 0.10809 0.0 0.48711 0.0 0.04617 0.00345 0.64516 0.0 0.0 0.18231 0.0 1.23357 0.16815 0.0 0.0 0.0 0.13282 0.12809 0.0 0.0 0.0 0. [...]
+Archaea|Euryarchaeota|Methanobacteria|Methanobacteriales|Methanobacteriaceae|Methanobrevibacter 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.2722 0.0 4.0086 0.41449 0.0 0.06246 0.0 0.00236 0.0 0.0 0.0 0.0 0.12353 0.0 0.0 0.11491 0.51887 0.0 0.0 0.06228 0.1019 0.26438 0.00923 0.09816 0.0 0.07485 0.11284 0.0 0.0 0.00727 0.0 0.0 0.19758 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.1037 0.07591 0.16434 0.29587 0.10809 0.0 0.48711 0.0 0.04617 0.00345 0.61712 0.0 0.0 0.18231 0.0 1.23357 0.16815 0.0 0.0 0.0 0.13282 0.12 [...]
+Archaea|Euryarchaeota|Methanobacteria|Methanobacteriales|Methanobacteriaceae|Methanobrevibacter|Methanobrevibacter_smithii 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.20868 0.0 3.71459 0.36731 0.0 0.04493 0.0 0.0 0.0 0.0 0.0 0.0 0.10488 0.0 0.0 0.10982 0.51887 0.0 0.0 0.03904 0.1019 0.23886 0.00747 0.0848 0.0 0.07257 0.10164 0.0 0.0 0.00727 0.0 0.0 0.16527 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.1037 0.07591 0.15473 0.27497 0.07284 0.0 0.33325 0.0 0.0373 0.00345 0.43288 0.0 0.0 0.15951 0.0 1.23357 0.15141 0 [...]
+Archaea|Euryarchaeota|Methanobacteria|Methanobacteriales|Methanobacteriaceae|Methanobrevibacter|Methanobrevibacter_unclassified 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.06352 0.0 0.29401 0.04719 0.0 0.01753 0.0 0.00236 0.0 0.0 0.0 0.0 0.01864 0.0 0.0 0.00509 0.0 0.0 0.0 0.02323 0.0 0.02553 0.00176 0.01336 0.0 0.00227 0.0112 0.0 0.0 0.0 0.0 0.0 0.03231 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0096 0.0209 0.03525 0.0 0.15386 0.0 0.00886 0.0 0.18424 0.0 0.0 0.02281 0.0 0.0 0.01674 0.0 0.0 0.0 0.0 0.0 [...]
+Archaea|Euryarchaeota|Methanobacteria|Methanobacteriales|Methanobacteriaceae|Methanosphaera 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.02336 0.0 0.01372 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00357 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.02804 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00536 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01233 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Archaea|Euryarchaeota|Methanobacteria|Methanobacteriales|Methanobacteriaceae|Methanosphaera|Methanosphaera_stadtmanae 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.02336 0.0 0.01372 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00357 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.02804 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00536 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01233 0.0 0.0 0.0 0.0 0.0 0.0 0. [...]
+Archaea|Euryarchaeota|Methanococci 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01828 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00966 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0045 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00428 0.0 0.0 0.0 0.00743 0.0 0.0 0.0 0.0 0.01149 0.0 0.0 0.0 0.0 0.00389 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00511 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0. [...]
+Archaea|Euryarchaeota|Methanococci|Methanococcales 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01828 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00966 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0045 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00428 0.0 0.0 0.0 0.00743 0.0 0.0 0.0 0.0 0.01149 0.0 0.0 0.0 0.0 0.00389 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00511 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0. [...]
+Archaea|Euryarchaeota|Methanococci|Methanococcales|Methanocaldococcaceae 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01828 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00966 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0045 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00428 0.0 0.0 0.0 0.00743 0.0 0.0 0.0 0.0 0.01149 0.0 0.0 0.0 0.0 0.00389 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00511 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Archaea|Euryarchaeota|Methanococci|Methanococcales|Methanocaldococcaceae|Methanocaldococcaceae_unclassified 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01828 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00966 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0045 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00428 0.0 0.0 0.0 0.00743 0.0 0.0 0.0 0.0 0.01149 0.0 0.0 0.0 0.0 0.00389 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00511 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 [...]
+Archaea|Euryarchaeota|Methanococci|Methanococcales|Methanocaldococcaceae|Methanocaldococcus 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Archaea|Euryarchaeota|Methanococci|Methanococcales|Methanocaldococcaceae|Methanocaldococcus|Methanocaldococcus_unclassified 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria 0.0 99.87203 100.0 0.0 0.0 99.97048 0.0 0.0 97.18787 0.0 95.97312 95.82605 0.0 99.93754 0.0 99.99764 0.0 0.0 0.0 99.98631 99.85943 0.0 0.0 97.34511 99.42919 99.90169 0.0 99.93772 99.72663 99.68677 99.68609 99.88812 99.99626 99.91614 99.88716 99.73249 99.19669 99.97854 100.0 99.87755 99.77415 99.93617 99.90649 99.55592 99.9023 99.99068 99.52199 99.98846 99.89273 99.91728 99.38746 99.65788 99.85638 100.0 99.39549 98.93601 99.90779 97.70548 99.34741 99.73463 99.67564 99.81769 99.94 [...]
+Bacteria|Acidobacteria 0.0 0.00444 0.0 0.0 0.0 0.00225 0.0 0.0 0.01157 0.0 0.0 0.00251 0.0 0.00979 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00597 0.13142 0.0 0.0 0.00531 0.0 0.0 0.00629 0.0 0.0 0.0 0.04446 0.00723 0.01846 0.0231 0.0139 0.01207 0.00575 0.01444 0.00662 0.0 0.00847 0.0 0.0 0.0 0.0 0.00872 0.01148 0.0 0.01177 0.0 0.00547 0.0 0.0 0.0 0.0 0.01549 0.0 0.0 0.02013 0.00734 0.0 0.00527 0.0 0.00314 0.0 0.0 0.0118 0.0 0.04532 0.0 0.0 0.00654 0.0 0.0 0.00836 0.01305 0.0 0.0404 0.0 0.0 0 [...]
+Bacteria|Acidobacteria|Acidobacteriia 0.0 0.00444 0.0 0.0 0.0 0.00225 0.0 0.0 0.01157 0.0 0.0 0.00251 0.0 0.00979 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00597 0.13142 0.0 0.0 0.00531 0.0 0.0 0.00629 0.0 0.0 0.0 0.04446 0.00723 0.01846 0.0231 0.0139 0.01207 0.00575 0.01444 0.00662 0.0 0.00847 0.0 0.0 0.0 0.0 0.00872 0.01148 0.0 0.01177 0.0 0.00547 0.0 0.0 0.0 0.0 0.01549 0.0 0.0 0.02013 0.00734 0.0 0.00527 0.0 0.00314 0.0 0.0 0.0118 0.0 0.04532 0.0 0.0 0.00654 0.0 0.0 0.00836 0.01305 0.0 0 [...]
+Bacteria|Acidobacteria|Acidobacteriia|Acidobacteriales 0.0 0.00444 0.0 0.0 0.0 0.00225 0.0 0.0 0.01157 0.0 0.0 0.00251 0.0 0.00979 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00597 0.13142 0.0 0.0 0.00531 0.0 0.0 0.00629 0.0 0.0 0.0 0.04446 0.00723 0.01846 0.0231 0.0139 0.01207 0.00575 0.01444 0.00662 0.0 0.00847 0.0 0.0 0.0 0.0 0.00872 0.01148 0.0 0.01177 0.0 0.00547 0.0 0.0 0.0 0.0 0.01549 0.0 0.0 0.02013 0.00734 0.0 0.00527 0.0 0.00314 0.0 0.0 0.0118 0.0 0.04532 0.0 0.0 0.00654 0.0 0.0 0.00 [...]
+Bacteria|Acidobacteria|Acidobacteriia|Acidobacteriales|Acidobacteriaceae 0.0 0.00444 0.0 0.0 0.0 0.00225 0.0 0.0 0.01157 0.0 0.0 0.00251 0.0 0.00979 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00597 0.13142 0.0 0.0 0.00531 0.0 0.0 0.00629 0.0 0.0 0.0 0.04446 0.00723 0.01846 0.0231 0.0139 0.01207 0.00575 0.01444 0.00662 0.0 0.00847 0.0 0.0 0.0 0.0 0.00872 0.01148 0.0 0.01177 0.0 0.00547 0.0 0.0 0.0 0.0 0.01549 0.0 0.0 0.02013 0.00734 0.0 0.00527 0.0 0.00314 0.0 0.0 0.0118 0.0 0.04532 0.0 0.0 0. [...]
+Bacteria|Acidobacteria|Acidobacteriia|Acidobacteriales|Acidobacteriaceae|Acidobacteriaceae_unclassified 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00979 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00662 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00209 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Acidobacteria|Acidobacteriia|Acidobacteriales|Acidobacteriaceae|Granulicella 0.0 0.00444 0.0 0.0 0.0 0.00225 0.0 0.0 0.01157 0.0 0.0 0.00251 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00597 0.13142 0.0 0.0 0.00531 0.0 0.0 0.00629 0.0 0.0 0.0 0.04446 0.00723 0.01846 0.0231 0.0139 0.01207 0.00575 0.01444 0.0 0.0 0.00847 0.0 0.0 0.0 0.0 0.00872 0.01148 0.0 0.01177 0.0 0.00547 0.0 0.0 0.0 0.0 0.01549 0.0 0.0 0.02013 0.00734 0.0 0.00527 0.0 0.00314 0.0 0.0 0.0118 0.0 0.04532 0.0 0 [...]
+Bacteria|Acidobacteria|Acidobacteriia|Acidobacteriales|Acidobacteriaceae|Granulicella|Granulicella_unclassified 0.0 0.00444 0.0 0.0 0.0 0.00225 0.0 0.0 0.01157 0.0 0.0 0.00251 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00597 0.13142 0.0 0.0 0.00531 0.0 0.0 0.00629 0.0 0.0 0.0 0.04446 0.00723 0.01846 0.0231 0.0139 0.01207 0.00575 0.01444 0.0 0.0 0.00847 0.0 0.0 0.0 0.0 0.00872 0.01148 0.0 0.01177 0.0 0.00547 0.0 0.0 0.0 0.0 0.01549 0.0 0.0 0.02013 0.00734 0.0 0.00527 0.0 0.00314 0.0 0. [...]
+Bacteria|Actinobacteria 0.0 1.35105 1.18383 0.0 0.0 0.19724 0.0 0.0 0.44089 0.0 1.49402 4.09939 0.0 0.41779 0.0 0.38089 0.0 0.0 0.0 2.50326 1.53672 0.0 0.0 0.12077 3.52984 0.59344 0.0 1.09483 1.18306 1.28656 0.42701 0.87611 0.1642 2.69399 0.06245 0.46259 0.89795 1.16247 0.82257 9.38748 4.96035 0.8928 0.80674 0.73462 0.24649 0.88489 2.34642 0.5633 1.29953 0.11715 0.4682 3.26175 1.81043 1.05982 1.23614 0.37045 0.81657 2.36817 1.06436 0.08636 3.24185 0.54991 0.64383 0.35707 4.35152 1.00451 [...]
+Bacteria|Actinobacteria|Actinobacteria 0.0 1.35105 1.18383 0.0 0.0 0.19724 0.0 0.0 0.44089 0.0 1.49402 4.09939 0.0 0.41779 0.0 0.38089 0.0 0.0 0.0 2.50326 1.53672 0.0 0.0 0.12077 3.52984 0.59344 0.0 1.09483 1.18306 1.28656 0.42701 0.87611 0.1642 2.69399 0.06245 0.46259 0.89795 1.16247 0.82257 9.38748 4.96035 0.8928 0.80674 0.73462 0.24649 0.88489 2.34642 0.5633 1.29953 0.11715 0.4682 3.26175 1.81043 1.05982 1.23614 0.37045 0.81657 2.36817 1.06436 0.08636 3.24185 0.54991 0.64383 0.35707 4 [...]
+Bacteria|Actinobacteria|Actinobacteria|Actinomycetales 0.0 0.0 0.09533 0.0 0.0 0.0 0.0 0.0 0.01515 0.0 0.01989 0.00759 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00423 0.0 0.0 0.0006 0.0 0.0 0.0 0.0 0.01753 0.0 0.01824 0.0 0.0 0.0 0.01744 0.03476 0.0 0.01482 0.0 0.00368 0.01707 0.00259 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00343 0.0 0.0 0.0 0.0 0.0 0.00331 0.00951 0.0 0.0 0.01752 0.0 0.0 0.0 0.0 0.01299 0.0 0.0 0.00161 0.0 0.0 0.0 0.0 0.0 0.00571 0.00488 0.0 0.01122 0.0 0.0 0.0 0.02421 0. [...]
+Bacteria|Actinobacteria|Actinobacteria|Actinomycetales|Actinomycetaceae 0.0 0.0 0.05427 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01018 0.0 0.00013 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Actinobacteria|Actinobacteria|Actinomycetales|Actinomycetaceae|Actinomyces 0.0 0.0 0.05427 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01018 0.0 0.00013 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Actinobacteria|Actinobacteria|Actinomycetales|Actinomycetaceae|Actinomyces|Actinomyces_graevenitzii 0.0 0.0 0.00049 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Actinobacteria|Actinobacteria|Actinomycetales|Actinomycetaceae|Actinomyces|Actinomyces_odontolyticus 0.0 0.0 0.05378 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01018 0.0 0.00013 0.0 0.0 0.0 0.0 0.0 0. [...]
+Bacteria|Actinobacteria|Actinobacteria|Actinomycetales|Actinomycetaceae|Actinomyces|Actinomyces_viscosus 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Actinobacteria|Actinobacteria|Actinomycetales|Actinomycetaceae|Mobiluncus 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 [...]
+Bacteria|Actinobacteria|Actinobacteria|Actinomycetales|Actinomycetaceae|Mobiluncus|Mobiluncus_curtisii 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 [...]
+Bacteria|Actinobacteria|Actinobacteria|Actinomycetales|Actinomycetaceae|Varibaculum 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Actinobacteria|Actinobacteria|Actinomycetales|Actinomycetaceae|Varibaculum|Varibaculum_cambriense 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 [...]
+Bacteria|Actinobacteria|Actinobacteria|Actinomycetales|Actinomycetales_noname 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00344 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00488 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0. [...]
+Bacteria|Actinobacteria|Actinobacteria|Actinomycetales|Actinomycetales_noname|Tropheryma 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00344 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00488 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Actinobacteria|Actinobacteria|Actinomycetales|Actinomycetales_noname|Tropheryma|Tropheryma_whipplei 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00344 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00488 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Actinobacteria|Actinobacteria|Actinomycetales|Brevibacteriaceae 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01485 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01482 0.0 0.0 0.01475 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00951 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01275 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01122 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Actinobacteria|Actinobacteria|Actinomycetales|Brevibacteriaceae|Brevibacterium 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01485 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01482 0.0 0.0 0.01475 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00951 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01275 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01122 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Actinobacteria|Actinobacteria|Actinomycetales|Brevibacteriaceae|Brevibacterium|Brevibacterium_linens 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00951 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0. [...]
+Bacteria|Actinobacteria|Actinobacteria|Actinomycetales|Brevibacteriaceae|Brevibacterium|Brevibacterium_unclassified 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01485 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01482 0.0 0.0 0.01475 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01275 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01122 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Actinobacteria|Actinobacteria|Actinomycetales|Corynebacteriaceae 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0. [...]
+Bacteria|Actinobacteria|Actinobacteria|Actinomycetales|Corynebacteriaceae|Corynebacterium 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0. [...]
+Bacteria|Actinobacteria|Actinobacteria|Actinomycetales|Corynebacteriaceae|Corynebacterium|Corynebacterium_aurimucosum 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0. [...]
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+Bacteria|Actinobacteria|Actinobacteria|Actinomycetales|Dermatophilaceae|Dermatophilaceae_unclassified 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01831 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0148 0.0 0.0 0.0 0.01744 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Actinobacteria|Actinobacteria|Actinomycetales|Micrococcaceae 0.0 0.0 0.04106 0.0 0.0 0.0 0.0 0.0 0.0003 0.0 0.00158 0.00273 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00423 0.0 0.0 0.0006 0.0 0.0 0.0 0.0 0.01753 0.0 0.0 0.0 0.0 0.0 0.0 0.03476 0.0 0.0 0.0 0.00368 0.00232 0.00259 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00343 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01752 0.0 0.0 0.0 0.0 0.00024 0.0 0.0 0.00161 0.0 0.0 0.0 0.0 0.0 0.00571 0.0 0.0 0.0 0.0 0.0 0.0 0.01403 0.0 0.0 0.0 0.0 [...]
+Bacteria|Actinobacteria|Actinobacteria|Actinomycetales|Micrococcaceae|Rothia 0.0 0.0 0.04106 0.0 0.0 0.0 0.0 0.0 0.0003 0.0 0.00158 0.00273 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00423 0.0 0.0 0.0006 0.0 0.0 0.0 0.0 0.01753 0.0 0.0 0.0 0.0 0.0 0.0 0.03476 0.0 0.0 0.0 0.00368 0.00232 0.00259 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00343 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01752 0.0 0.0 0.0 0.0 0.00024 0.0 0.0 0.00161 0.0 0.0 0.0 0.0 0.0 0.00571 0.0 0.0 0.0 0.0 0.0 0.0 0.01403 0.0 0.0 0 [...]
+Bacteria|Actinobacteria|Actinobacteria|Actinomycetales|Micrococcaceae|Rothia|Rothia_dentocariosa 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Actinobacteria|Actinobacteria|Actinomycetales|Micrococcaceae|Rothia|Rothia_mucilaginosa 0.0 0.0 0.04106 0.0 0.0 0.0 0.0 0.0 0.0003 0.0 0.00158 0.00273 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0006 0.0 0.0 0.0 0.0 0.01753 0.0 0.0 0.0 0.0 0.0 0.0 0.03476 0.0 0.0 0.0 0.00368 0.0 0.00259 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00343 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00187 0.0 0.0 0.0 0.0 0.00024 0.0 0.0 0.00161 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01403 0 [...]
+Bacteria|Actinobacteria|Actinobacteria|Actinomycetales|Micrococcaceae|Rothia|Rothia_unclassified 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00423 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00232 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01565 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00571 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Actinobacteria|Actinobacteria|Actinomycetales|Propionibacteriaceae 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00487 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00331 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00051 0.0 0.03665 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Actinobacteria|Actinobacteria|Actinomycetales|Propionibacteriaceae|Propionibacteriaceae_unclassified 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00487 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01233 0.0 0. [...]
+Bacteria|Actinobacteria|Actinobacteria|Actinomycetales|Propionibacteriaceae|Propionibacterium 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00331 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00051 0.0 0.02431 0.0 0.0 0.0 0.0 0. [...]
+Bacteria|Actinobacteria|Actinobacteria|Actinomycetales|Propionibacteriaceae|Propionibacterium|Propionibacterium_acnes 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00051 0.0 0.0243 [...]
+Bacteria|Actinobacteria|Actinobacteria|Actinomycetales|Propionibacteriaceae|Propionibacterium|Propionibacterium_freudenreichii 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00331 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 [...]
+Bacteria|Actinobacteria|Actinobacteria|Bifidobacteriales 0.0 0.86517 0.54314 0.0 0.0 0.0325 0.0 0.0 0.30093 0.0 1.38673 3.6635 0.0 0.29093 0.0 0.0 0.0 0.0 0.0 1.92026 1.29385 0.0 0.0 0.00464 2.61346 0.01927 0.0 0.97688 0.8487 0.70633 0.18356 0.59104 0.1012 2.43522 0.00598 0.04599 0.79968 0.76006 0.59399 7.94171 4.64653 0.78617 0.68825 0.2332 0.0 0.7837 1.77974 0.36222 0.93312 0.11715 0.33493 2.20191 1.63516 0.61703 1.01691 0.16069 0.46926 1.77102 0.91702 0.0 1.31914 0.25503 0.50381 0.257 [...]
+Bacteria|Actinobacteria|Actinobacteria|Bifidobacteriales|Bifidobacteriaceae 0.0 0.86517 0.54314 0.0 0.0 0.0325 0.0 0.0 0.30093 0.0 1.38673 3.6635 0.0 0.29093 0.0 0.0 0.0 0.0 0.0 1.92026 1.29385 0.0 0.0 0.00464 2.61346 0.01927 0.0 0.97688 0.8487 0.70633 0.18356 0.59104 0.1012 2.43522 0.00598 0.04599 0.79968 0.76006 0.59399 7.94171 4.64653 0.78617 0.68825 0.2332 0.0 0.7837 1.77974 0.36222 0.93312 0.11715 0.33493 2.20191 1.63516 0.61703 1.01691 0.16069 0.46926 1.77102 0.91702 0.0 1.31914 0. [...]
+Bacteria|Actinobacteria|Actinobacteria|Bifidobacteriales|Bifidobacteriaceae|Alloscardovia 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00239 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0. [...]
+Bacteria|Actinobacteria|Actinobacteria|Bifidobacteriales|Bifidobacteriaceae|Alloscardovia|Alloscardovia_omnicolens 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00239 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 [...]
+Bacteria|Actinobacteria|Actinobacteria|Bifidobacteriales|Bifidobacteriaceae|Bifidobacterium 0.0 0.86324 0.54314 0.0 0.0 0.0325 0.0 0.0 0.30093 0.0 1.38673 3.66111 0.0 0.29093 0.0 0.0 0.0 0.0 0.0 1.92026 1.29385 0.0 0.0 0.0 2.61346 0.01927 0.0 0.97688 0.8487 0.70633 0.18356 0.59104 0.1012 2.43522 0.0 0.04599 0.79968 0.76006 0.59399 7.94171 4.64653 0.78617 0.68825 0.2332 0.0 0.7837 1.77974 0.36222 0.93312 0.11715 0.33493 2.20191 1.63516 0.61703 1.01691 0.16069 0.46926 1.77102 0.91702 0.0 1 [...]
+Bacteria|Actinobacteria|Actinobacteria|Bifidobacteriales|Bifidobacteriaceae|Bifidobacterium|Bifidobacterium_adolescentis 0.0 0.78149 0.0 0.0 0.0 0.01132 0.0 0.0 0.17263 0.0 1.20948 1.88734 0.0 0.22727 0.0 0.0 0.0 0.0 0.0 1.46373 0.34104 0.0 0.0 0.0 2.46621 0.0 0.0 0.97688 0.80628 0.23876 0.11994 0.33477 0.06734 2.16372 0.0 0.04599 0.0 0.36009 0.0 7.01515 3.69939 0.59013 0.46257 0.2332 0.0 0.72134 1.62894 0.36222 0.55577 0.0 0.21656 1.50744 1.63516 0.51365 0.01118 0.0 0.0 0.67003 0.18539 [...]
+Bacteria|Actinobacteria|Actinobacteria|Bifidobacteriales|Bifidobacteriaceae|Bifidobacterium|Bifidobacterium_angulatum 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.02096 0.0 0.0 0.0 0.0 0.06767 0.0 0.0 0.0 0.0 0.02209 0.0 0.0 0.0 0.0 0.0 0.18435 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.04731 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.04209 0.0 0.0 0.02496 0.0 0.0 0.0 0.0 0.0 0.0 0. [...]
+Bacteria|Actinobacteria|Actinobacteria|Bifidobacteriales|Bifidobacteriaceae|Bifidobacterium|Bifidobacterium_animalis 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.02039 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Actinobacteria|Actinobacteria|Bifidobacteriales|Bifidobacteriaceae|Bifidobacterium|Bifidobacterium_bifidum 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.04261 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.26725 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.08337 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01598 0.0 0.0 0.0 0.08568 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Actinobacteria|Actinobacteria|Bifidobacteriales|Bifidobacteriaceae|Bifidobacterium|Bifidobacterium_breve 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0. [...]
+Bacteria|Actinobacteria|Actinobacteria|Bifidobacteriales|Bifidobacteriaceae|Bifidobacterium|Bifidobacterium_catenulatum 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01317 0.0 0.0 0.0 0.01391 0.00501 0.0 0.0 0.0 0.01216 0.0 0.0 0.0 0.0 0.0 0.17302 0.01344 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.49182 0.0 0.0 0.03253 0.0 0.0 0.08253 0.0 0.0 0.0 0.0 0.0 0.0 0.0261 0.0 0.0 0.09197 0.01937 0.0 0.0 0.16608 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.187 [...]
+Bacteria|Actinobacteria|Actinobacteria|Bifidobacteriales|Bifidobacteriaceae|Bifidobacterium|Bifidobacterium_dentium 0.0 0.0 0.01343 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01116 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00335 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0017 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01743 0.0 0.01863 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00602 0.0 0.0 0 [...]
+Bacteria|Actinobacteria|Actinobacteria|Bifidobacteriales|Bifidobacteriaceae|Bifidobacterium|Bifidobacterium_longum 0.0 0.08175 0.52972 0.0 0.0 0.02118 0.0 0.0 0.12831 0.0 0.17725 1.72 0.0 0.06365 0.0 0.0 0.0 0.0 0.0 0.18928 0.95281 0.0 0.0 0.0 0.08087 0.01927 0.0 0.0 0.0285 0.46257 0.06362 0.25292 0.0129 0.25934 0.0 0.0 0.25734 0.3323 0.59399 0.75184 0.9337 0.19605 0.20359 0.0 0.0 0.06236 0.15079 0.0 0.193 0.11715 0.11837 0.01426 0.0 0.08475 0.95281 0.16069 0.0969 0.88778 0.73163 0.0 0.7 [...]
+Bacteria|Actinobacteria|Actinobacteria|Bifidobacteriales|Bifidobacteriaceae|Bifidobacterium|Bifidobacterium_pseudocatenulatum 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0532 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.54234 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.17096 0.0 0.0 0.0 0.0 0.37236 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.07592 0.0 0.0 0.0 0.0 0.0 0.10797 0.0 0.0 0.02589 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.7 [...]
+Bacteria|Actinobacteria|Actinobacteria|Bifidobacteriales|Bifidobacteriaceae|Gardnerella 0.0 0.00193 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.03724 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Actinobacteria|Actinobacteria|Bifidobacteriales|Bifidobacteriaceae|Gardnerella|Gardnerella_vaginalis 0.0 0.00193 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.03724 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0. [...]
+Bacteria|Actinobacteria|Actinobacteria|Bifidobacteriales|Bifidobacteriaceae|Scardovia 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00464 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00598 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0043 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Actinobacteria|Actinobacteria|Bifidobacteriales|Bifidobacteriaceae|Scardovia|Scardovia_unclassified 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00464 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00598 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0043 [...]
+Bacteria|Actinobacteria|Actinobacteria|Bifidobacteriales|Bifidobacteriaceae|Scardovia|Scardovia_wiggsiae 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Actinobacteria|Actinobacteria|Coriobacteriales 0.0 0.48588 0.54536 0.0 0.0 0.16474 0.0 0.0 0.12481 0.0 0.0874 0.4283 0.0 0.12687 0.0 0.38089 0.0 0.0 0.0 0.583 0.23865 0.0 0.0 0.11553 0.91638 0.57417 0.0 0.11794 0.31684 0.58023 0.22521 0.28507 0.063 0.25877 0.03903 0.38184 0.09828 0.38758 0.22858 1.44208 0.29675 0.10404 0.11849 0.50142 0.24649 0.10119 0.56668 0.20108 0.36641 0.0 0.13327 1.05984 0.17526 0.43936 0.21923 0.20976 0.34732 0.59715 0.14733 0.08305 1.91319 0.29488 0.1400 [...]
+Bacteria|Actinobacteria|Actinobacteria|Coriobacteriales|Coriobacteriaceae 0.0 0.48588 0.54536 0.0 0.0 0.16474 0.0 0.0 0.12481 0.0 0.0874 0.4283 0.0 0.12687 0.0 0.38089 0.0 0.0 0.0 0.583 0.23865 0.0 0.0 0.11553 0.91638 0.57417 0.0 0.11794 0.31684 0.58023 0.22521 0.28507 0.063 0.25877 0.03903 0.38184 0.09828 0.38758 0.22858 1.44208 0.29675 0.10404 0.11849 0.50142 0.24649 0.10119 0.56668 0.20108 0.36641 0.0 0.13327 1.05984 0.17526 0.43936 0.21923 0.20976 0.34732 0.59715 0.14733 0.08305 1.91 [...]
+Bacteria|Actinobacteria|Actinobacteria|Coriobacteriales|Coriobacteriaceae|Adlercreutzia 0.0 0.03887 0.05125 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.02937 0.0 0.01767 0.0 0.07061 0.0 0.0 0.0 0.08575 0.0 0.0 0.0 0.00353 0.0 0.07449 0.0 0.02091 0.0 0.0 0.0 0.02761 0.0 0.04251 0.0083 0.01081 0.0 0.0 0.0 0.05859 0.00558 0.00113 0.01718 0.0 0.01422 0.0 0.00613 0.09467 0.0 0.0 0.0 0.0 0.03957 0.0 0.0 0.0 0.06303 0.06636 0.13329 0.00246 0.19744 0.0 0.00058 0.02831 0.08822 0.0 0.03417 0.01041 0.00088 0 [...]
+Bacteria|Actinobacteria|Actinobacteria|Coriobacteriales|Coriobacteriaceae|Adlercreutzia|Adlercreutzia_equolifaciens 0.0 0.03887 0.05125 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.02937 0.0 0.01767 0.0 0.07061 0.0 0.0 0.0 0.08575 0.0 0.0 0.0 0.00353 0.0 0.07449 0.0 0.02091 0.0 0.0 0.0 0.02761 0.0 0.04251 0.0083 0.01081 0.0 0.0 0.0 0.05859 0.00558 0.00113 0.01718 0.0 0.01422 0.0 0.00613 0.09467 0.0 0.0 0.0 0.0 0.03957 0.0 0.0 0.0 0.06303 0.06636 0.13329 0.00246 0.19744 0.0 0.00058 0.02831 0.08822 0 [...]
+Bacteria|Actinobacteria|Actinobacteria|Coriobacteriales|Coriobacteriaceae|Atopobium 0.0 0.0 0.00248 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.02581 0.0 0.0 0.00037 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00287 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00291 0.0 0.00764 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Actinobacteria|Actinobacteria|Coriobacteriales|Coriobacteriaceae|Atopobium|Atopobium_parvulum 0.0 0.0 0.00248 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00037 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00287 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00291 0.0 0.00764 0.0 0.0 0.0 0.0 0.0 0 [...]
+Bacteria|Actinobacteria|Actinobacteria|Coriobacteriales|Coriobacteriaceae|Atopobium|Atopobium_rimae 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Actinobacteria|Actinobacteria|Coriobacteriales|Coriobacteriaceae|Atopobium|Atopobium_vaginae 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.02581 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0. [...]
+Bacteria|Actinobacteria|Actinobacteria|Coriobacteriales|Coriobacteriaceae|Collinsella 0.0 0.10366 0.37645 0.0 0.0 0.15812 0.0 0.0 0.10043 0.0 0.02885 0.38315 0.0 0.1 0.0 0.3089 0.0 0.0 0.0 0.47001 0.01732 0.0 0.0 0.09956 0.88726 0.48622 0.0 0.0 0.30277 0.53406 0.21165 0.2488 0.05954 0.18003 0.02518 0.36159 0.091 0.37925 0.12599 1.38011 0.2709 0.07859 0.09823 0.37545 0.22323 0.09224 0.54934 0.10642 0.34738 0.0 0.12015 0.95754 0.12869 0.42893 0.18832 0.2053 0.26713 0.52726 0.0026 0.08059 1 [...]
+Bacteria|Actinobacteria|Actinobacteria|Coriobacteriales|Coriobacteriaceae|Collinsella|Collinsella_aerofaciens 0.0 0.06533 0.37645 0.0 0.0 0.15812 0.0 0.0 0.10043 0.0 0.0 0.38315 0.0 0.1 0.0 0.3089 0.0 0.0 0.0 0.47001 0.01732 0.0 0.0 0.09956 0.88726 0.48622 0.0 0.0 0.30277 0.53406 0.21165 0.2488 0.05954 0.18003 0.0 0.36159 0.091 0.37925 0.12599 1.3173 0.2709 0.07859 0.09823 0.37545 0.22323 0.02132 0.54934 0.10642 0.34738 0.0 0.12015 0.95754 0.12869 0.42893 0.18832 0.2053 0.26713 0.52726 0 [...]
+Bacteria|Actinobacteria|Actinobacteria|Coriobacteriales|Coriobacteriaceae|Collinsella|Collinsella_intestinalis 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.06282 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.02955 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.05141 0.0 0.0 0 [...]
+Bacteria|Actinobacteria|Actinobacteria|Coriobacteriales|Coriobacteriaceae|Collinsella|Collinsella_stercoris 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Actinobacteria|Actinobacteria|Coriobacteriales|Coriobacteriaceae|Collinsella|Collinsella_tanakaei 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 [...]
+Bacteria|Actinobacteria|Actinobacteria|Coriobacteriales|Coriobacteriaceae|Collinsella|Collinsella_unclassified 0.0 0.03833 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.02885 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.02518 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.07092 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0026 0.0 0.0 0.0 0.0 0.01141 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0. [...]
+Bacteria|Actinobacteria|Actinobacteria|Coriobacteriales|Coriobacteriaceae|Coriobacteriaceae_noname 0.0 0.25445 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0267 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.04366 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0. [...]
+Bacteria|Actinobacteria|Actinobacteria|Coriobacteriales|Coriobacteriaceae|Coriobacteriaceae_noname|Coriobacteriaceae_bacterium_phI 0.0 0.25445 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0267 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.04366 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0. [...]
+Bacteria|Actinobacteria|Actinobacteria|Coriobacteriales|Coriobacteriaceae|Eggerthella 0.0 0.00202 0.10893 0.0 0.0 0.00044 0.0 0.0 0.0 0.0 0.0 0.011 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01895 0.09464 0.0 0.0 0.00735 0.0 0.0 0.0 0.0519 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00425 0.0 0.0 0.09034 0.0 0.0 0.00026 0.0 0.10425 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00552 0.0 0.0 0.0 0.0 0.0 0.00855 0.0 0.00636 0.0 0.0 0.0 0.00349 0.0 0.05902 0.0 0.0 0.0133 0.0 0.0 0.02411 0.0 0.0 0.0 0.0 0.0 0.00606 0.0 0.0 0.0 0. [...]
+Bacteria|Actinobacteria|Actinobacteria|Coriobacteriales|Coriobacteriaceae|Eggerthella|Eggerthella_lenta 0.0 0.00202 0.00466 0.0 0.0 0.00044 0.0 0.0 0.0 0.0 0.0 0.00146 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00216 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00608 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0136 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00502 0.0 0.0 0.00407 0.0 0.0 0.00026 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.10276 0.0 0 [...]
+Bacteria|Actinobacteria|Actinobacteria|Coriobacteriales|Coriobacteriaceae|Eggerthella|Eggerthella_sp_1_3_56FAA 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.10325 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 [...]
+Bacteria|Actinobacteria|Actinobacteria|Coriobacteriales|Coriobacteriaceae|Eggerthella|Eggerthella_unclassified 0.0 0.0 0.10427 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00953 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01679 0.09464 0.0 0.0 0.00735 0.0 0.0 0.0 0.04582 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00425 0.0 0.0 0.09034 0.0 0.0 0.00026 0.0 0.09064 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00552 0.0 0.0 0.0 0.0 0.0 0.00855 0.0 0.00636 0.0 0.0 0.0 0.00349 0.0 0.054 0.0 0.0 0.00924 0.0 0.0 0.02386 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Actinobacteria|Actinobacteria|Coriobacteriales|Coriobacteriaceae|Gordonibacter 0.0 0.00517 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00642 0.0 0.0 0.0 0.0 0.0 0.00475 0.12669 0.0 0.0 0.0 0.0 0.01347 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.03142 0.0 0.00201 0.0 0.0 0.00566 0.0 0.00935 0.01884 0.0 0.02172 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00759 0.0 0.01143 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.03491 0.0 0.00122 0.00359 0.0 0.01362 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.014 0.00873 0.0 0.0032 [...]
+Bacteria|Actinobacteria|Actinobacteria|Coriobacteriales|Coriobacteriaceae|Gordonibacter|Gordonibacter_pamelaeae 0.0 0.00517 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00642 0.0 0.0 0.0 0.0 0.0 0.00475 0.12669 0.0 0.0 0.0 0.0 0.01347 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.03142 0.0 0.00201 0.0 0.0 0.00566 0.0 0.00935 0.01884 0.0 0.02172 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00759 0.0 0.01143 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.03491 0.0 0.00122 0.00359 0.0 0.01362 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Actinobacteria|Actinobacteria|Coriobacteriales|Coriobacteriaceae|Olsenella 0.0 0.0 0.00625 0.0 0.0 0.00618 0.0 0.0 0.02438 0.0 0.03185 0.00478 0.0 0.00278 0.0 0.00139 0.0 0.0 0.0 0.00354 0.0 0.0 0.0 0.0051 0.02912 0.0 0.0 0.00148 0.01407 0.04617 0.01356 0.00866 0.00346 0.00481 0.00556 0.00318 0.00728 0.00833 0.00659 0.00338 0.01092 0.00522 0.00308 0.0 0.00904 0.00895 0.01121 0.0 0.01903 0.0 0.01312 0.1023 0.00148 0.01044 0.02332 0.00156 0.00573 0.00353 0.0029 0.0 0.0 0.03936 0.0 [...]
+Bacteria|Actinobacteria|Actinobacteria|Coriobacteriales|Coriobacteriaceae|Olsenella|Olsenella_unclassified 0.0 0.0 0.00625 0.0 0.0 0.00618 0.0 0.0 0.02438 0.0 0.03185 0.00478 0.0 0.00278 0.0 0.00139 0.0 0.0 0.0 0.00354 0.0 0.0 0.0 0.0051 0.02912 0.0 0.0 0.00148 0.01407 0.04617 0.01356 0.00866 0.00346 0.00481 0.00556 0.00318 0.00728 0.00833 0.00659 0.00338 0.01092 0.00522 0.00308 0.0 0.00904 0.00895 0.01121 0.0 0.01903 0.0 0.01312 0.1023 0.00148 0.01044 0.02332 0.00156 0.00573 0.00353 0.0 [...]
+Bacteria|Actinobacteria|Actinobacteria|Coriobacteriales|Coriobacteriaceae|Slackia 0.0 0.08171 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00289 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01671 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.03995 0.0 0.0214 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Actinobacteria|Actinobacteria|Coriobacteriales|Coriobacteriaceae|Slackia|Slackia_piriformis 0.0 0.08171 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00289 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01671 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.03995 0.0 0.0214 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Aquificae 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01339 0.0 0.0 0.0 0.003 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Aquificae|Aquificae 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01339 0.0 0.0 0.0 0.003 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 [...]
+Bacteria|Aquificae|Aquificae|Aquificales 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01339 0.0 0.0 0.0 0.003 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 [...]
+Bacteria|Aquificae|Aquificae|Aquificales|Desulfurobacteriaceae 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01339 0.0 0.0 0.0 0.003 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Aquificae|Aquificae|Aquificales|Desulfurobacteriaceae|Desulfurobacteriaceae_unclassified 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01339 0.0 0.0 0.0 0.003 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Bacteroidetes 0.0 31.42741 27.63622 0.0 0.0 56.82153 0.0 0.0 20.21688 0.0 38.69081 40.1387 0.0 30.9753 0.0 56.82011 0.0 0.0 0.0 67.30269 42.90054 0.0 0.0 66.24006 31.81924 63.45959 0.0 64.41406 14.67185 21.61205 70.90129 30.25375 79.30338 40.62126 39.82558 45.81738 43.01549 59.49981 43.037 35.42882 32.58378 45.79259 24.62953 50.21449 47.68908 58.25657 35.71628 53.54667 34.09272 42.1134 22.93145 11.03874 25.79755 46.01537 27.34326 58.25128 48.09944 30.17154 20.45742 71.90083 28.6 [...]
+Bacteria|Bacteroidetes|Bacteroidetes_noname 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Bacteroidetes|Bacteroidetes_noname|Bacteroidetes_noname 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Bacteroidetes|Bacteroidetes_noname|Bacteroidetes_noname|Bacteroidetes_noname 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0. [...]
+Bacteria|Bacteroidetes|Bacteroidetes_noname|Bacteroidetes_noname|Bacteroidetes_noname|Bacteroidetes_noname 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 [...]
+Bacteria|Bacteroidetes|Bacteroidetes_noname|Bacteroidetes_noname|Bacteroidetes_noname|Bacteroidetes_noname|Bacteroidetes_bacterium_oral_taxon_272 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0. [...]
+Bacteria|Bacteroidetes|Bacteroidia 0.0 31.42741 27.63622 0.0 0.0 56.82153 0.0 0.0 20.19297 0.0 38.66526 40.1387 0.0 30.95522 0.0 56.67578 0.0 0.0 0.0 67.27276 42.90054 0.0 0.0 66.24006 31.79244 63.45959 0.0 64.33297 14.67185 21.61205 70.90129 30.167 79.20691 40.57325 39.82558 45.81405 42.95716 59.38604 43.02559 35.42882 32.5635 45.77724 24.61304 50.13283 47.61714 58.235 35.71628 53.54667 34.008 42.07627 22.93145 11.03874 25.78789 45.99071 27.29595 58.03181 48.0495 30.16889 20.45742 71.82 [...]
+Bacteria|Bacteroidetes|Bacteroidia|Bacteroidales 0.0 31.42741 27.63622 0.0 0.0 56.82153 0.0 0.0 20.19297 0.0 38.66526 40.1387 0.0 30.95522 0.0 56.67578 0.0 0.0 0.0 67.27276 42.90054 0.0 0.0 66.24006 31.79244 63.45959 0.0 64.33297 14.67185 21.61205 70.90129 30.167 79.20691 40.57325 39.82558 45.81405 42.95716 59.38604 43.02559 35.42882 32.5635 45.77724 24.61304 50.13283 47.61714 58.235 35.71628 53.54667 34.008 42.07627 22.93145 11.03874 25.78789 45.99071 27.29595 58.03181 48.0495 30.16889 [...]
+Bacteria|Bacteroidetes|Bacteroidia|Bacteroidales|Bacteroidaceae 0.0 10.89876 19.73711 0.0 0.0 4.99076 0.0 0.0 2.22731 0.0 17.57741 21.11051 0.0 12.59695 0.0 32.83073 0.0 0.0 0.0 40.53308 18.04566 0.0 0.0 44.08262 17.05952 14.80077 0.0 27.25492 0.47861 1.99947 4.36234 18.14492 6.74168 25.7579 14.77456 37.60989 30.74573 44.70246 21.97878 21.45508 9.76718 14.39308 13.27844 39.83773 14.00022 12.4411 18.74737 23.39161 5.90284 25.31735 13.9971 0.57895 11.06032 36.32283 12.36722 16.40482 27.808 [...]
+Bacteria|Bacteroidetes|Bacteroidia|Bacteroidales|Bacteroidaceae|Bacteroides 0.0 10.89876 19.73711 0.0 0.0 4.99076 0.0 0.0 2.22731 0.0 17.57741 21.11051 0.0 12.59695 0.0 32.83073 0.0 0.0 0.0 40.53308 18.04566 0.0 0.0 44.08262 17.05952 14.80077 0.0 27.25492 0.47861 1.99947 4.36234 18.14492 6.74168 25.7579 14.77456 37.60989 30.74573 44.70246 21.97878 21.45508 9.76718 14.39308 13.27844 39.83773 14.00022 12.4411 18.74737 23.39161 5.90284 25.31735 13.9971 0.57895 11.06032 36.32283 12.36722 16. [...]
+Bacteria|Bacteroidetes|Bacteroidia|Bacteroidales|Bacteroidaceae|Bacteroides|Bacteroides_barnesiae 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 3.65506 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 21.58127 0.01521 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 [...]
+Bacteria|Bacteroidetes|Bacteroidia|Bacteroidales|Bacteroidaceae|Bacteroides|Bacteroides_caccae 0.0 0.37462 0.0 0.0 0.0 0.13861 0.0 0.0 0.07003 0.0 2.20985 0.0 0.0 0.62721 0.0 0.0 0.0 0.0 0.0 0.0 1.33356 0.0 0.0 0.0 2.72839 9.85098 0.0 4.01179 0.0 0.21618 0.52032 0.01842 0.41559 0.99075 0.0 0.0 2.58109 0.0472 1.7617 0.72608 0.3539 0.0 2.02002 0.00388 0.02175 1.34935 0.59068 2.74782 2.92245 0.78697 0.0 0.04266 0.0 0.05861 1.3079 0.11415 0.4453 2.91701 6.07455 9.27493 1.37607 0.1282 0.0 1.3 [...]
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+Bacteria|Bacteroidetes|Bacteroidia|Bacteroidales|Bacteroidaceae|Bacteroides|Bacteroides_clarus 0.0 0.21612 0.0 0.0 0.0 0.17994 0.0 0.0 0.0 0.0 0.51506 0.0 0.0 0.0 0.0 5.78196 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.15787 0.0 0.11132 0.0 0.0 0.0 0.08625 0.59437 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.116 0.0 0.0 0.00144 0.0 0.04321 0.0 0.0 0.0 0.0973 0.01135 0.0 1.82431 0.0 0.0 0.0 0.16313 0.00648 0.0 0.0 0.0 0.0 0.0 0.81701 0.0 0.87368 0.42725 0.0 0.27471 0.0 0.0 0.0 0.0 0.0 0.00 [...]
+Bacteria|Bacteroidetes|Bacteroidia|Bacteroidales|Bacteroidaceae|Bacteroides|Bacteroides_coprocola 0.0 0.0 1.1839 0.0 0.0 0.0 0.0 0.0 0.22761 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00151 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 1.88038 0.0 0.0 0.0 0.34218 0.0 0.0 0.0 0.0 0.00036 0.45219 0.0 0.0 0.0 0.0 0.0 0.0 0.97092 0.0 0.0 0.0 0.0 0.0 0.0 2.14648 0.0 0.0 1.621 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.36988 0.0 0.0 0.0 0.0 12.30 [...]
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+Bacteria|Bacteroidetes|Bacteroidia|Bacteroidales|Bacteroidaceae|Bacteroides|Bacteroides_dorei 0.0 1.43745 1.21342 0.0 0.0 1.71493 0.0 0.0 0.43846 0.0 0.0 4.43137 0.0 0.2222 0.0 0.00575 0.0 0.0 0.0 27.48675 0.13188 0.0 0.0 0.0 4.21232 0.0 0.0 0.45886 0.10328 0.309 0.09719 0.12759 0.11969 2.14963 3.53917 0.0 0.4786 0.82768 3.36122 3.2504 0.65869 1.26797 1.72172 1.74236 0.67763 0.34817 0.48306 0.0 0.5118 4.4284 0.23513 0.0469 0.0 0.33439 0.74038 0.94552 1.93971 0.79533 0.00259 26.35727 1.59 [...]
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+Bacteria|Bacteroidetes|Bacteroidia|Bacteroidales|Bacteroidaceae|Bacteroides|Bacteroides_finegoldii 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.02667 0.0 0.0 0.0 0.0 0.53881 0.0 0.0 0.0 0.0 0.0 0.00018 0.0 0.0 0.0 0.0 0.21835 0.0 0.0 0.34148 0.02387 0.0 0.0 0.00561 0.11765 0.0 0.0 17.31573 1.22651 1.93759 0.0 0.0 0.07063 0.00069 0.00149 0.56948 1.48056 0.0 0.0 0.0 0.00139 0.0 0.5859 0.13094 0.0 0.0 0.0 0.0 0.00115 0.0 0.0 0.00257 0.0 0.0 0.0 0.0 0.0 0.00137 0.0 0.0 0.0 0.0 0.97309 0.27941 0.0 0.0 0 [...]
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+Bacteria|Bacteroidetes|Bacteroidia|Bacteroidales|Bacteroidaceae|Bacteroides|Bacteroides_fragilis 0.0 0.29277 1.34111 0.0 0.0 0.0 0.0 0.0 0.00705 0.0 0.02323 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 1.92556 3.65224 0.0 0.0 0.0 0.58082 0.0 0.0 0.26387 0.0 0.0 0.0 0.58838 0.0 0.0 0.76585 0.30893 0.21134 0.80348 0.68311 0.0 0.0 0.0 0.0 0.97108 0.0 0.20274 0.11173 1.26137 0.0 0.64716 0.0 0.0 2.93255 0.0 0.0 0.02805 0.26059 0.16532 0.0 1.54759 0.5629 0.02088 0.0 0.0 0.07789 0.13357 4.53806 0.0 0.0 2.04 [...]
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+Bacteria|Bacteroidetes|Bacteroidia|Bacteroidales|Bacteroidaceae|Bacteroides|Bacteroides_ovatus 0.0 0.0826 1.20282 0.0 0.0 0.00128 0.0 0.0 0.07977 0.0 0.22457 0.0 0.0 0.28354 0.0 0.00274 0.0 0.0 0.0 4.5106 0.0 0.0 0.0 0.0 0.01018 0.00489 0.0 0.19419 0.0 0.00829 0.02652 0.47506 0.08194 0.86078 0.07656 0.0 0.04675 0.50445 0.11341 0.39402 0.87547 1.85116 0.6171 1.6043 0.0212 0.35113 0.5748 3.94435 0.0545 0.0 0.76381 0.02973 0.00023 0.07035 0.16359 0.42856 0.18347 1.06425 0.19189 2.96584 0.11 [...]
+Bacteria|Bacteroidetes|Bacteroidia|Bacteroidales|Bacteroidaceae|Bacteroides|Bacteroides_plebeius 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.09302 0.0 0.0 0.0 0.05281 0.0 0.0 0.0 0.0 0.0 0.0 0.0 4.04682 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.15596 0.0 0.0 0.0 2.5436 0.13432 0.0 0.0 0.0 0.0 3.88365 0.0 0.0 4.66894 1.28063 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.71986 1.08903 0.0 0.0 0.12909 0.3668 0.0 0.0 3.80094 0.0 0.0 4.16822 0.0 0.0 19.02801 0.0 0.0 0.57405 0.0 [...]
+Bacteria|Bacteroidetes|Bacteroidia|Bacteroidales|Bacteroidaceae|Bacteroides|Bacteroides_salanitronis 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 3.09288 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 5.03987 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00099 0.0 0.00343 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00021 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0004 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
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+Bacteria|Bacteroidetes|Bacteroidia|Bacteroidales|Bacteroidaceae|Bacteroides|Bacteroides_thetaiotaomicron 0.0 0.51383 0.55564 0.0 0.0 0.01827 0.0 0.0 0.09433 0.0 0.75429 0.54336 0.0 1.06737 0.0 1.38142 0.0 0.0 0.0 1.32412 0.6539 0.0 0.0 0.0 1.52635 0.0 0.0 0.47142 0.0 0.01888 0.18281 0.65711 0.0 0.5772 3.20645 0.0 0.99374 1.46323 0.00139 3.22964 0.34277 0.5786 0.47402 2.21872 0.32504 0.0 0.27567 0.0 0.47528 0.97272 0.05112 0.0046 0.0 0.1852 0.02448 0.11629 0.0 0.13658 0.29556 0.0003 0.514 [...]
+Bacteria|Bacteroidetes|Bacteroidia|Bacteroidales|Bacteroidaceae|Bacteroides|Bacteroides_uniformis 0.0 3.04588 5.84116 0.0 0.0 0.15787 0.0 0.0 0.17221 0.0 1.25037 0.47383 0.0 3.2304 0.0 8.28311 0.0 0.0 0.0 3.40168 0.07225 0.0 0.0 25.38529 1.63282 2.87878 0.0 4.09786 0.03247 0.30389 0.48062 4.78125 0.0921 7.6259 0.0 7.19862 3.3854 4.95329 6.79069 5.75676 1.13044 1.46414 1.6381 20.3678 1.53658 0.97073 3.32826 12.15742 0.28479 6.77347 0.72133 0.25352 0.0 7.77317 0.03666 10.54457 1.43806 1.03 [...]
+Bacteria|Bacteroidetes|Bacteroidia|Bacteroidales|Bacteroidaceae|Bacteroides|Bacteroides_vulgatus 0.0 4.85542 3.53904 0.0 0.0 0.84929 0.0 0.0 0.54784 0.0 2.00516 0.02583 0.0 1.26375 0.0 8.98362 0.0 0.0 0.0 0.0 7.79543 0.0 0.0 0.0 1.44072 0.98346 0.0 1.58572 0.22722 0.35369 1.6332 3.87569 0.44257 4.07394 0.43114 8.84292 2.5922 9.53955 0.0 2.25863 2.19221 3.06014 6.77736 4.04216 0.57515 1.20243 3.50242 3.28065 0.80388 0.07785 0.84985 0.00284 0.0 0.93402 1.64198 1.47328 2.62599 3.1605 0.8748 [...]
+Bacteria|Bacteroidetes|Bacteroidia|Bacteroidales|Bacteroidaceae|Bacteroides|Bacteroides_xylanisolvens 0.0 0.056 0.32967 0.0 0.0 0.06719 0.0 0.0 0.01835 0.0 0.01158 0.0 0.0 0.01474 0.0 0.26641 0.0 0.0 0.0 1.22931 0.03155 0.0 0.0 0.0 0.07072 0.7715 0.0 0.0061 0.00132 0.10071 0.06403 0.0 0.01189 0.34407 0.0 0.53757 0.33435 0.18378 0.0 0.09766 0.00199 0.0068 0.02412 0.00729 0.11499 0.0 0.032 0.0 0.02494 0.51231 0.0 0.00262 0.0 0.0 0.01272 0.45856 1.39279 0.0 0.0 1.06045 0.10959 0.19516 0.210 [...]
+Bacteria|Bacteroidetes|Bacteroidia|Bacteroidales|Bacteroidales_noname 0.0 1.68503 0.0 0.0 0.0 0.06111 0.0 0.0 0.2969 0.0 0.44808 0.0 0.0 0.5449 0.0 0.0 0.0 0.0 0.0 0.0 0.19862 0.0 0.0 0.00209 0.60744 0.0 0.0 0.57431 0.302 0.02807 0.16219 1.11724 0.02051 0.76151 0.67324 4.23816 0.44094 0.31863 2.93872 0.47699 0.8622 1.11735 0.26553 0.8107 0.39463 0.1815 0.22315 0.51769 0.75075 0.72248 0.07497 0.01708 0.0 0.17905 0.63169 0.55828 0.30623 0.19833 0.0 0.0 3.16781 0.12392 0.47931 0.43018 3.830 [...]
+Bacteria|Bacteroidetes|Bacteroidia|Bacteroidales|Bacteroidales_noname|Bacteroidales_noname 0.0 1.68503 0.0 0.0 0.0 0.06111 0.0 0.0 0.2969 0.0 0.44808 0.0 0.0 0.5449 0.0 0.0 0.0 0.0 0.0 0.0 0.19862 0.0 0.0 0.00209 0.60744 0.0 0.0 0.57431 0.302 0.02807 0.16219 1.11724 0.02051 0.76151 0.67324 4.23816 0.44094 0.31863 2.93872 0.47699 0.8622 1.11735 0.26553 0.8107 0.39463 0.1815 0.22315 0.51769 0.75075 0.72248 0.07497 0.01708 0.0 0.17905 0.63169 0.55828 0.30623 0.19833 0.0 0.0 3.16781 0.12392 [...]
+Bacteria|Bacteroidetes|Bacteroidia|Bacteroidales|Bacteroidales_noname|Bacteroidales_noname|Bacteroidales_bacterium_ph8 0.0 1.68503 0.0 0.0 0.0 0.06111 0.0 0.0 0.2969 0.0 0.44808 0.0 0.0 0.5449 0.0 0.0 0.0 0.0 0.0 0.0 0.19862 0.0 0.0 0.00209 0.60744 0.0 0.0 0.57431 0.302 0.02807 0.16219 1.11724 0.02051 0.76151 0.67324 4.23816 0.44094 0.31863 2.93872 0.47699 0.8622 1.11735 0.26553 0.8107 0.39463 0.1815 0.22315 0.51769 0.75075 0.72248 0.07497 0.01708 0.0 0.17905 0.63169 0.55828 0.30623 0.19 [...]
+Bacteria|Bacteroidetes|Bacteroidia|Bacteroidales|Marinilabiliaceae 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0006 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00051 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0. [...]
+Bacteria|Bacteroidetes|Bacteroidia|Bacteroidales|Marinilabiliaceae|Marinilabiliaceae_unclassified 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0006 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00051 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Bacteroidetes|Bacteroidia|Bacteroidales|Porphyromonadaceae 0.0 2.27286 3.75148 0.0 0.0 2.55606 0.0 0.0 3.22152 0.0 10.98504 7.55223 0.0 5.49324 0.0 17.87577 0.0 0.0 0.0 15.83479 12.33568 0.0 0.0 11.02465 8.83398 0.31394 0.0 18.12451 1.3967 1.62127 2.91521 3.65703 3.74105 6.57075 4.23976 1.8424 8.70043 7.60605 2.76068 5.6048 7.25012 9.52211 3.89585 3.46642 2.41789 9.36801 7.27315 2.89137 5.02762 3.80929 2.17481 1.07928 0.37085 2.74095 4.82117 10.90156 8.37652 11.31434 3.15427 11. [...]
+Bacteria|Bacteroidetes|Bacteroidia|Bacteroidales|Porphyromonadaceae|Barnesiella 0.0 0.41515 0.0 0.0 0.0 0.88041 0.0 0.0 0.1567 0.0 3.22483 2.75205 0.0 3.47023 0.0 4.37752 0.0 0.0 0.0 0.0 2.44956 0.0 0.0 4.5894 0.70163 0.0 0.0 12.6615 0.05673 0.01311 0.07669 1.21551 0.38823 1.61833 1.82168 0.06166 0.11019 0.24055 0.0 1.32399 5.04542 7.08218 0.42756 0.85071 0.35555 2.95189 3.27783 0.60192 0.56492 0.0 0.42191 0.00723 0.0 0.60605 0.58859 2.8822 2.41 6.71798 0.0 11.14733 6.73061 0.21459 1.176 [...]
+Bacteria|Bacteroidetes|Bacteroidia|Bacteroidales|Porphyromonadaceae|Barnesiella|Barnesiella_intestinihominis 0.0 0.41515 0.0 0.0 0.0 0.88041 0.0 0.0 0.1567 0.0 3.22483 2.75205 0.0 3.47023 0.0 4.37752 0.0 0.0 0.0 0.0 2.44956 0.0 0.0 4.5894 0.70163 0.0 0.0 12.6615 0.05673 0.01311 0.07669 1.21551 0.38823 1.61833 1.82168 0.06166 0.11019 0.24055 0.0 1.32399 5.04542 7.08218 0.42756 0.85071 0.35555 2.95189 3.27783 0.60192 0.56492 0.0 0.42191 0.00723 0.0 0.60605 0.58859 2.8822 2.41 6.71798 0.0 1 [...]
+Bacteria|Bacteroidetes|Bacteroidia|Bacteroidales|Porphyromonadaceae|Butyricimonas 0.0 0.0 0.00163 0.0 0.0 0.00564 0.0 0.0 0.0 0.0 0.00609 0.0 0.0 0.0 0.0 0.00305 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01535 0.0 0.0 0.00957 0.00062 0.0 0.0 0.00882 0.0 0.0034 0.0 0.0 0.0006 0.00537 0.0 0.0 0.00256 0.00428 0.0 0.01095 0.00334 0.0 0.00105 0.0 0.0003 0.01077 0.0 0.0 0.0 0.00144 0.01219 0.00366 0.0032 0.00114 0.0 0.0 0.00264 0.0022 0.00147 0.0 0.0 0.0 0.0 0.00325 0.00123 0.00622 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Bacteroidetes|Bacteroidia|Bacteroidales|Porphyromonadaceae|Butyricimonas|Butyricimonas_synergistica 0.0 0.0 0.00163 0.0 0.0 0.00564 0.0 0.0 0.0 0.0 0.00609 0.0 0.0 0.0 0.0 0.00305 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01535 0.0 0.0 0.00957 0.00062 0.0 0.0 0.00882 0.0 0.0034 0.0 0.0 0.0006 0.00537 0.0 0.0 0.00256 0.00428 0.0 0.01095 0.00334 0.0 0.00105 0.0 0.0003 0.01077 0.0 0.0 0.0 0.00144 0.01219 0.00366 0.0032 0.00114 0.0 0.0 0.00264 0.0022 0.00147 0.0 0.0 0.0 0.0 0.00325 0.00123 [...]
+Bacteria|Bacteroidetes|Bacteroidia|Bacteroidales|Porphyromonadaceae|Coprobacter 0.0 0.0715 0.06959 0.0 0.0 0.07731 0.0 0.0 0.00485 0.0 0.05893 0.0 0.0 0.08049 0.0 0.0 0.0 0.0 0.0 1.03363 0.11492 0.0 0.0 0.0 0.0389 0.23002 0.0 0.0 0.0 0.0 0.00785 0.00642 0.0 0.0 0.0 0.0 0.00051 0.0216 0.0 0.0 0.01737 0.03611 0.0 0.0 0.01588 0.12798 0.26615 0.0 0.0 0.0 0.01106 0.0 0.0 0.0 0.04517 0.01804 0.02359 0.0 0.0 0.0 0.42981 0.03415 0.0 0.08336 0.03356 0.0779 0.0 0.00261 0.0522 0.09343 0.07379 0.063 [...]
+Bacteria|Bacteroidetes|Bacteroidia|Bacteroidales|Porphyromonadaceae|Coprobacter|Coprobacter_fastidiosus 0.0 0.0715 0.06959 0.0 0.0 0.07731 0.0 0.0 0.00485 0.0 0.05893 0.0 0.0 0.08049 0.0 0.0 0.0 0.0 0.0 1.03363 0.11492 0.0 0.0 0.0 0.0389 0.23002 0.0 0.0 0.0 0.0 0.00785 0.00642 0.0 0.0 0.0 0.0 0.00051 0.0216 0.0 0.0 0.01737 0.03611 0.0 0.0 0.01588 0.12798 0.26615 0.0 0.0 0.0 0.01106 0.0 0.0 0.0 0.04517 0.01804 0.02359 0.0 0.0 0.0 0.42981 0.03415 0.0 0.08336 0.03356 0.0779 0.0 0.00261 0.05 [...]
+Bacteria|Bacteroidetes|Bacteroidia|Bacteroidales|Porphyromonadaceae|Dysgonomonas 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00128 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00277 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00024 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Bacteroidetes|Bacteroidia|Bacteroidales|Porphyromonadaceae|Dysgonomonas|Dysgonomonas_unclassified 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00128 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00277 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00024 0.0 0.0 0 [...]
+Bacteria|Bacteroidetes|Bacteroidia|Bacteroidales|Porphyromonadaceae|Odoribacter 0.0 0.88717 1.19365 0.0 0.0 0.65547 0.0 0.0 0.65465 0.0 1.61682 1.76098 0.0 0.40109 0.0 4.26488 0.0 0.0 0.0 1.03766 1.95977 0.0 0.0 0.03746 0.3322 0.0 0.0 1.04872 0.08401 0.42543 0.31661 0.6333 0.16358 1.13353 2.38134 1.66995 0.61249 1.16452 0.99469 0.9663 1.03766 1.47003 0.52423 0.98639 0.45041 0.64949 0.73259 0.53322 2.40413 1.48508 0.4008 0.0174 0.34512 0.36283 0.37598 0.4628 0.93883 0.56452 1.59191 0.0 0. [...]
+Bacteria|Bacteroidetes|Bacteroidia|Bacteroidales|Porphyromonadaceae|Odoribacter|Odoribacter_laneus 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.4118 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.03863 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0. [...]
+Bacteria|Bacteroidetes|Bacteroidia|Bacteroidales|Porphyromonadaceae|Odoribacter|Odoribacter_splanchnicus 0.0 0.88717 1.19365 0.0 0.0 0.65547 0.0 0.0 0.65465 0.0 1.61682 1.76098 0.0 0.40109 0.0 1.27303 0.0 0.0 0.0 1.03766 1.95977 0.0 0.0 0.0 0.3322 0.0 0.0 1.04872 0.0 0.42543 0.31661 0.6333 0.16358 1.13353 2.38134 1.66995 0.61249 1.16452 0.99469 0.9663 1.03766 1.47003 0.52423 0.98639 0.45041 0.64949 0.73259 0.53322 2.40413 1.48508 0.4008 0.0 0.34512 0.36283 0.37598 0.42417 0.93883 0.56452 [...]
+Bacteria|Bacteroidetes|Bacteroidia|Bacteroidales|Porphyromonadaceae|Odoribacter|Odoribacter_unclassified 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 2.58004 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.03746 0.0 0.0 0.0 0.0 0.08401 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0174 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Bacteroidetes|Bacteroidia|Bacteroidales|Porphyromonadaceae|Parabacteroides 0.0 0.89904 2.48661 0.0 0.0 0.93724 0.0 0.0 2.40532 0.0 6.07838 3.0254 0.0 1.5377 0.0 9.23032 0.0 0.0 0.0 13.7635 7.81144 0.0 0.0 6.39779 7.7459 0.08393 0.0 4.40472 1.25534 1.18274 2.51406 1.79298 3.18923 3.81549 0.03674 0.11079 7.97664 6.17401 1.76599 3.31451 1.14712 0.9295 2.94407 1.61836 1.59272 5.63865 2.99553 1.75624 2.05827 2.31343 1.34104 1.05465 0.02572 1.77062 3.79796 7.53487 5.0009 4.0307 1.5623 [...]
+Bacteria|Bacteroidetes|Bacteroidia|Bacteroidales|Porphyromonadaceae|Parabacteroides|Parabacteroides_distasonis 0.0 0.21268 0.13544 0.0 0.0 0.04425 0.0 0.0 0.30299 0.0 0.20242 0.0 0.0 0.67235 0.0 2.31663 0.0 0.0 0.0 5.727 0.81532 0.0 0.0 1.23742 0.0 0.0 0.0 0.59745 0.00219 0.0924 0.0 1.27142 0.26588 1.99398 0.0 0.0158 0.37837 0.00265 0.0 0.3619 0.0312 0.0 0.23914 0.88676 0.01433 1.67281 0.39237 0.55517 0.11423 0.47695 0.43398 0.07091 0.0 0.49745 0.03135 1.6457 0.0 0.52511 1.16996 0.0 0.96 [...]
+Bacteria|Bacteroidetes|Bacteroidia|Bacteroidales|Porphyromonadaceae|Parabacteroides|Parabacteroides_goldsteinii 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.47921 0.0 0.0 0.0 0.0 0.01347 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.23411 0.0 0.52157 0.0 0.0 0.0 0.0 0.0 0.01151 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.07173 0.11511 0.0 0.0 0.0 0.0 0.80925 0.0 0.0 0.01779 0.81236 0.0 0.0 0.0 0.0 0.00459 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.46969 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Bacteroidetes|Bacteroidia|Bacteroidales|Porphyromonadaceae|Parabacteroides|Parabacteroides_johnsonii 0.0 0.0 0.0 0.0 0.0 0.02428 0.0 0.0 0.00351 0.0 2.5912 0.00026 0.0 0.00117 0.0 6.30274 0.0 0.0 0.0 0.0 0.04899 0.0 0.0 0.0 5.04777 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00062 0.0 0.0 0.13352 0.0 0.0 0.0 0.0 0.0 0.0 0.00919 0.0 0.09025 0.0 0.0 0.0 0.0 0.05375 0.0 0.0 0.0 0.24659 0.0 0.0 0.98663 0.0 0.09348 0.0 0.0 0.0 0.0 0.0 0.03548 0.0 1.32541 0.0 0.0 0.0 0.0 0.0764 0.01 [...]
+Bacteria|Bacteroidetes|Bacteroidia|Bacteroidales|Porphyromonadaceae|Parabacteroides|Parabacteroides_merdae 0.0 0.33098 2.35117 0.0 0.0 0.19519 0.0 0.0 0.29878 0.0 2.80555 0.83613 0.0 0.50024 0.0 0.59748 0.0 0.0 0.0 5.49189 1.28219 0.0 0.0 0.0 0.0 0.0 0.0 1.45984 0.75553 0.55413 2.0702 0.0 0.30684 1.13269 0.0 0.0 2.92632 2.62824 1.76599 2.81909 0.66112 0.9295 2.70493 0.0 0.67278 0.61584 0.8255 0.0 1.24365 0.0 0.90706 0.44878 0.0 0.03704 2.39985 5.88916 3.2668 2.29073 0.0 0.0 0.0 1.3643 2. [...]
+Bacteria|Bacteroidetes|Bacteroidia|Bacteroidales|Porphyromonadaceae|Parabacteroides|Parabacteroides_sp_20_3 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Bacteroidetes|Bacteroidia|Bacteroidales|Porphyromonadaceae|Parabacteroides|Parabacteroides_sp_D13 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.46414 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 1.7341 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.83409 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.86156 0. [...]
+Bacteria|Bacteroidetes|Bacteroidia|Bacteroidales|Porphyromonadaceae|Parabacteroides|Parabacteroides_unclassified 0.0 0.35539 0.0 0.0 0.0 0.67352 0.0 0.0 1.80004 0.0 0.0 2.18901 0.0 0.36394 0.0 0.0 0.0 0.0 0.0 2.54461 5.66493 0.0 0.0 5.16036 2.69813 0.08393 0.0 2.34743 0.49762 0.3021 0.44387 0.0 2.61651 0.68882 0.03674 0.09499 4.67134 3.53161 0.0 0.0 0.4548 0.0 0.0 0.7316 0.44147 3.35 1.76848 1.20107 0.61013 1.83649 0.0 0.53496 0.02572 1.11065 1.25165 0.0 0.0 0.96828 0.39241 0.0 0.32041 1 [...]
+Bacteria|Bacteroidetes|Bacteroidia|Bacteroidales|Porphyromonadaceae|Porphyromonas 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01379 0.0 0.00372 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.04597 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.09242 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.03138 0.0 0.0 0. [...]
+Bacteria|Bacteroidetes|Bacteroidia|Bacteroidales|Porphyromonadaceae|Porphyromonas|Porphyromonas_asaccharolytica 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01242 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01749 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.02396 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Bacteroidetes|Bacteroidia|Bacteroidales|Porphyromonadaceae|Porphyromonas|Porphyromonas_bennonis 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00119 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01077 [...]
+Bacteria|Bacteroidetes|Bacteroidia|Bacteroidales|Porphyromonadaceae|Porphyromonas|Porphyromonas_somerae 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00121 0.0 0.00372 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.06846 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Bacteroidetes|Bacteroidia|Bacteroidales|Porphyromonadaceae|Porphyromonas|Porphyromonas_uenonis 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00016 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.02729 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00 [...]
+Bacteria|Bacteroidetes|Bacteroidia|Bacteroidales|Prevotellaceae 0.0 0.53487 0.00907 0.0 0.0 41.95794 0.0 0.0 11.92289 0.0 0.0 2.28205 0.0 0.0 0.0 0.0 0.0 0.0 0.0 4.41003 0.0 0.0 0.0 0.0 0.004 46.16176 0.0 0.0 12.19011 17.7264 59.59402 0.0 66.74952 3.83607 6.40667 0.00384 0.0 0.0 0.0 0.0 0.46336 0.0 2.86964 5.02322 26.5056 27.9863 0.0 25.42573 13.61069 0.0 0.74248 8.97064 0.00857 1.76838 2.89522 22.57799 1.90874 2.3158 0.0 0.02865 0.1125 28.56135 38.70929 16.78916 0.0 0.0 0.00232 1.18749 [...]
+Bacteria|Bacteroidetes|Bacteroidia|Bacteroidales|Prevotellaceae|Alloprevotella 0.0 0.0 0.0 0.0 0.0 0.02832 0.0 0.0 0.02804 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.004 0.0 0.0 0.0 0.00755 0.02353 0.0 0.0 0.0 0.0 0.0 0.00384 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0104 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00903 0.00566 0.07484 0.0 0.0 0.0 0.00392 0.0 0.03255 0.0 0.0 0.0 0.0 0.00232 0.0 0.0 0.0 0.0 0.0 0.00268 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Bacteroidetes|Bacteroidia|Bacteroidales|Prevotellaceae|Alloprevotella|Alloprevotella_unclassified 0.0 0.0 0.0 0.0 0.0 0.02832 0.0 0.0 0.02804 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.004 0.0 0.0 0.0 0.00755 0.02353 0.0 0.0 0.0 0.0 0.0 0.00384 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0104 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00903 0.00566 0.07484 0.0 0.0 0.0 0.00392 0.0 0.03255 0.0 0.0 0.0 0.0 0.00232 0.0 0.0 0.0 0.0 0.0 0.00268 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Bacteroidetes|Bacteroidia|Bacteroidales|Prevotellaceae|Paraprevotella 0.0 0.53487 0.0 0.0 0.0 4.70858 0.0 0.0 1.45238 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 4.41003 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.17569 3.17758 1.03854 0.0 1.33021 3.83607 6.3943 0.0 0.0 0.0 0.0 0.0 0.46336 0.0 2.86964 0.0 10.36962 27.9863 0.0 0.0 1.67639 0.0 0.74248 0.09083 0.0 1.73128 2.83524 22.50315 1.90874 2.31106 0.0 0.0 0.0 0.87648 0.0 1.35624 0.0 0.0 0.0 1.18749 0.9394 0.0 0.0 1.34092 0.0 0.0 0.0 1.138 [...]
+Bacteria|Bacteroidetes|Bacteroidia|Bacteroidales|Prevotellaceae|Paraprevotella|Paraprevotella_clara 0.0 0.25475 0.0 0.0 0.0 1.16606 0.0 0.0 0.48641 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 2.44926 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.04967 0.73642 0.0 0.0 0.46437 1.32282 0.0 0.0 0.0 0.0 0.0 0.0 0.15319 0.0 0.9243 0.0 3.58651 14.43964 0.0 0.0 0.80141 0.0 0.23545 0.01784 0.0 0.51884 0.90918 0.00113 0.60986 0.77066 0.0 0.0 0.0 0.2876 0.0 0.00045 0.0 0.0 0.0 0.28766 0.28644 0.0 0.0 0.41611 0.0 0 [...]
+Bacteria|Bacteroidetes|Bacteroidia|Bacteroidales|Prevotellaceae|Paraprevotella|Paraprevotella_unclassified 0.0 0.20121 0.0 0.0 0.0 3.24494 0.0 0.0 0.95874 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 1.36492 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.12244 2.26257 0.30294 0.0 0.72489 2.23782 1.21506 0.0 0.0 0.0 0.0 0.0 0.30504 0.0 1.73767 0.0 6.72605 11.24458 0.0 0.0 0.79126 0.0 0.49926 0.07299 0.0 1.15657 1.87047 4.0909 1.26621 1.42456 0.0 0.0 0.0 0.50463 0.0 0.27399 0.0 0.0 0.0 0.87942 0.63487 0.0 0 [...]
+Bacteria|Bacteroidetes|Bacteroidia|Bacteroidales|Prevotellaceae|Paraprevotella|Paraprevotella_xylaniphila 0.0 0.0789 0.0 0.0 0.0 0.29759 0.0 0.0 0.00723 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.59584 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00359 0.1786 0.7356 0.0 0.14096 0.27543 5.17924 0.0 0.0 0.0 0.0 0.0 0.00513 0.0 0.20767 0.0 0.05705 2.30207 0.0 0.0 0.08372 0.0 0.00778 0.0 0.0 0.05586 0.05559 18.41112 0.03267 0.11584 0.0 0.0 0.0 0.08425 0.0 1.0818 0.0 0.0 0.0 0.0204 0.0181 0.0 0.0 0.06814 [...]
+Bacteria|Bacteroidetes|Bacteroidia|Bacteroidales|Prevotellaceae|Prevotella 0.0 0.0 0.00907 0.0 0.0 37.22104 0.0 0.0 10.44247 0.0 0.0 2.28205 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 46.16176 0.0 0.0 12.00687 14.52528 58.55548 0.0 65.41931 0.0 0.01237 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 5.02322 16.12558 0.0 0.0 25.42573 11.9343 0.0 0.0 8.87981 0.00857 0.02808 0.05432 0.0 0.0 0.00474 0.0 0.02473 0.1125 27.65232 38.70929 15.43292 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.09651 12.763 [...]
+Bacteria|Bacteroidetes|Bacteroidia|Bacteroidales|Prevotellaceae|Prevotella|Prevotella_amnii 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Bacteroidetes|Bacteroidia|Bacteroidales|Prevotellaceae|Prevotella|Prevotella_bergensis 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00091 0.0 0.0 0.0 [...]
+Bacteria|Bacteroidetes|Bacteroidia|Bacteroidales|Prevotellaceae|Prevotella|Prevotella_bivia 0.0 0.0 0.0 0.0 0.0 0.00013 0.0 0.0 0.0 0.0 0.0 0.00099 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0262 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 [...]
+Bacteria|Bacteroidetes|Bacteroidia|Bacteroidales|Prevotellaceae|Prevotella|Prevotella_buccae 0.0 0.0 0.00907 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.02473 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Bacteroidetes|Bacteroidia|Bacteroidales|Prevotellaceae|Prevotella|Prevotella_buccalis 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.05432 0.0 0.0 0.0 0.0 0.0 0.00353 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.09651 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00345 0.0 0.0 0.0 0.0 0.024 [...]
+Bacteria|Bacteroidetes|Bacteroidia|Bacteroidales|Prevotellaceae|Prevotella|Prevotella_copri 0.0 0.0 0.0 0.0 0.0 37.21382 0.0 0.0 10.44247 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 46.15846 0.0 0.0 10.46185 6.02317 58.55548 0.0 65.41931 0.0 0.01237 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 16.10171 0.0 0.0 25.42573 11.9343 0.0 0.0 8.46892 0.0 0.02808 0.0 0.0 0.0 0.0 0.0 0.0 0.0 27.65232 38.70929 15.43292 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 12.76353 55.87005 0.23029 [...]
+Bacteria|Bacteroidetes|Bacteroidia|Bacteroidales|Prevotellaceae|Prevotella|Prevotella_disiens 0.0 0.0 0.0 0.0 0.0 0.00709 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0033 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00857 0.0 0.0 0.0 0.0 0.00474 0.0 0.0 0.05999 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00289 0.0 0.0 0.0 0.0 0.00802 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Bacteroidetes|Bacteroidia|Bacteroidales|Prevotellaceae|Prevotella|Prevotella_melaninogenica 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00273 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Bacteroidetes|Bacteroidia|Bacteroidales|Prevotellaceae|Prevotella|Prevotella_multisaccharivorax 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00766 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Bacteroidetes|Bacteroidia|Bacteroidales|Prevotellaceae|Prevotella|Prevotella_oralis 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Bacteroidetes|Bacteroidia|Bacteroidales|Prevotellaceae|Prevotella|Prevotella_oris 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 [...]
+Bacteria|Bacteroidetes|Bacteroidia|Bacteroidales|Prevotellaceae|Prevotella|Prevotella_stercorea 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 2.27332 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 1.54502 8.50211 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 5.02322 0.0162 0.0 0.0 0.0 0.0 0.0 0.0 0.41089 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 16.89 [...]
+Bacteria|Bacteroidetes|Bacteroidia|Bacteroidales|Prevotellaceae|Prevotella|Prevotella_timonensis 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00501 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.02279 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Bacteroidetes|Bacteroidia|Bacteroidales|Rikenellaceae 0.0 16.03589 4.13856 0.0 0.0 7.25566 0.0 0.0 2.52434 0.0 9.65473 9.19391 0.0 12.32013 0.0 5.96928 0.0 0.0 0.0 6.49486 12.32058 0.0 0.0 11.1307 5.28749 2.18312 0.0 18.37923 0.30443 0.23684 3.86752 7.24781 1.95416 3.64702 13.73136 2.11975 3.07005 6.7589 15.34741 7.89195 14.22065 20.74469 4.30358 0.99477 4.2988 8.25811 9.47261 1.32027 8.7161 12.22715 5.94208 0.3928 14.34816 4.9795 6.58065 7.58916 9.6494 4.04935 6.04144 4.11651 7 [...]
+Bacteria|Bacteroidetes|Bacteroidia|Bacteroidales|Rikenellaceae|Alistipes 0.0 16.03589 4.13856 0.0 0.0 7.25566 0.0 0.0 2.52434 0.0 9.65473 9.19391 0.0 12.32013 0.0 5.96928 0.0 0.0 0.0 6.49486 12.32058 0.0 0.0 11.1307 5.28749 2.18312 0.0 18.37923 0.30443 0.23684 3.86752 7.24781 1.95416 3.64702 13.73136 2.11975 3.07005 6.7589 15.34741 7.89195 14.22065 20.74469 4.30358 0.99477 4.2988 8.25811 9.47261 1.32027 8.7161 12.22715 5.94208 0.3928 14.34816 4.9795 6.58065 7.58916 9.6494 4.04935 6.04144 [...]
+Bacteria|Bacteroidetes|Bacteroidia|Bacteroidales|Rikenellaceae|Alistipes|Alistipes_finegoldii 0.0 2.50453 0.29308 0.0 0.0 1.8201 0.0 0.0 0.0059 0.0 0.21599 0.02118 0.0 0.17344 0.0 0.00319 0.0 0.0 0.0 0.12273 0.043 0.0 0.0 0.10958 0.04218 0.11818 0.0 1.09051 0.0 0.00843 0.06506 0.03033 0.00566 0.47449 0.0 0.02451 0.01433 0.09905 0.0 2.47879 0.16315 0.2772 0.00437 0.24325 0.02501 0.08708 0.29626 1.31542 0.21234 0.18466 0.08 0.04463 2.65322 0.3825 0.27847 0.04509 0.0 0.0 0.15319 2.66722 0.0 [...]
+Bacteria|Bacteroidetes|Bacteroidia|Bacteroidales|Rikenellaceae|Alistipes|Alistipes_indistinctus 0.0 0.22194 0.0 0.0 0.0 0.01478 0.0 0.0 0.04768 0.0 0.03116 0.00349 0.0 0.0061 0.0 0.05399 0.0 0.0 0.0 0.0 0.06581 0.0 0.0 0.07914 0.31915 0.0 0.0 0.30053 0.0 0.0 0.0 0.18752 0.02465 0.03289 0.21994 0.75628 0.05109 0.01322 0.0 0.0 0.40317 0.17908 0.0 0.07088 0.01306 0.03917 0.03183 0.0 0.25627 0.1571 0.0 0.0 0.92349 0.00086 0.01727 0.0 0.08754 0.06362 0.02419 0.09395 0.13098 0.06553 0.24132 0. [...]
+Bacteria|Bacteroidetes|Bacteroidia|Bacteroidales|Rikenellaceae|Alistipes|Alistipes_onderdonkii 0.0 7.81402 2.08986 0.0 0.0 0.01908 0.0 0.0 0.01832 0.0 1.89942 1.19231 0.0 4.57888 0.0 0.27162 0.0 0.0 0.0 1.3196 10.11097 0.0 0.0 0.5061 0.04602 1.83902 0.0 3.95938 0.0 0.00539 0.14374 0.61605 0.00521 0.07802 10.02153 1.29713 0.09919 1.13936 0.02701 0.20331 0.29924 0.48878 0.04477 0.0 0.50944 0.96272 0.1538 0.0 2.87758 0.13173 0.06825 0.0 3.25751 0.3574 0.18912 0.06458 1.2708 1.09868 1.87907 [...]
+Bacteria|Bacteroidetes|Bacteroidia|Bacteroidales|Rikenellaceae|Alistipes|Alistipes_putredinis 0.0 2.71664 0.0 0.0 0.0 5.09451 0.0 0.0 1.30773 0.0 5.83741 5.76659 0.0 6.63376 0.0 4.8815 0.0 0.0 0.0 5.05253 1.89472 0.0 0.0 7.8256 3.25855 0.0 0.0 11.67323 0.00208 0.0 3.40288 5.35744 1.7301 2.71788 0.02815 0.04182 2.60847 3.14815 0.01025 4.96435 6.75902 8.85255 3.83446 0.0 3.09537 6.88982 8.63654 0.00485 4.71324 1.56948 5.25218 0.0 0.0 2.97476 4.07283 4.96119 7.17187 0.0 3.65058 0.0 0.02497 [...]
+Bacteria|Bacteroidetes|Bacteroidia|Bacteroidales|Rikenellaceae|Alistipes|Alistipes_senegalensis 0.0 0.2136 0.0 0.0 0.0 0.044 0.0 0.0 0.02463 0.0 0.12901 0.00555 0.0 0.11234 0.0 0.03983 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.11034 0.15133 0.0 0.0 0.0 0.04852 0.06042 0.0252 0.0843 0.01802 0.17183 0.12215 0.0 0.29626 0.21902 1.24854 0.00113 0.39195 0.50521 0.03282 0.0 0.08159 0.04646 0.16123 0.0 0.19641 0.18302 0.05492 0.01117 0.0 0.01079 0.10512 0.05172 0.1975 0.10855 0.08061 0.0 0.00175 0.03078 0. [...]
+Bacteria|Bacteroidetes|Bacteroidia|Bacteroidales|Rikenellaceae|Alistipes|Alistipes_shahii 0.0 2.15183 1.75562 0.0 0.0 0.20769 0.0 0.0 0.52383 0.0 1.13433 0.80379 0.0 0.81562 0.0 0.71915 0.0 0.0 0.0 0.0 0.20608 0.0 0.0 1.49393 1.47027 0.0 0.0 0.00061 0.23944 0.11813 0.23064 0.82039 0.17052 0.17191 0.34852 0.0 0.00071 1.13789 3.46422 0.081 1.946 2.93731 0.38716 0.68064 0.2546 0.23284 0.19295 0.0 0.46026 0.80334 0.48673 0.337 0.01586 1.25319 1.91784 1.74683 0.92169 0.25592 0.25381 0.0 1.364 [...]
+Bacteria|Bacteroidetes|Bacteroidia|Bacteroidales|Rikenellaceae|Alistipes|Alistipes_sp_AP11 0.0 0.41334 0.0 0.0 0.0 0.0555 0.0 0.0 0.0 0.0 0.40742 0.8269 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 1.35496 0.0 0.0 0.0 0.15177 0.0 0.0 0.95412 0.0 0.0 0.18228 0.0 0.16338 0.78053 1.18817 0.0 0.0 0.31974 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.71976 0.0 0.0 0.0 1.35534 1.24897 0.0 0.11364 0.0 0.75602 0.12542 0.0 0.1196 0.0 0.69832 0.0 0.0 0.0 0.15505 0.0 0.0 0.0 0.49342 0.0 [...]
+Bacteria|Bacteroidetes|Bacteroidia|Bacteroidales|Rikenellaceae|Alistipes|Alistipes_sp_HGB5 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.5741 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 1.006 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 3.47759 6.31638 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.99553 0.17942 0.0 0.22282 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Bacteroidetes|Bacteroidia|Bacteroidales|Rikenellaceae|Alistipes|Alistipes_sp_JC136 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Bacteroidetes|Bacteroidia|Bacteroidales|Rikenellaceae|Alistipes|Alistipes_unclassified 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.59626 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.22593 0.0 0.0 0.01438 0.04446 0.0 0.0 0.0 0.0 2.03696 0.0 0.0 0.81992 10.59738 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 9.19783 0.0 0.0 7.49807 0.0 0.0 0.0 0.0 2.52258 0.0 0.0 0.0 0.0 0.0 0.0 8.45074 0.0 0.01981 0.0 0.0 0.0 0.0 0.0 4.16808 0.0 0.0 0.0 0.0 2.26052 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Bacteroidetes|Flavobacteriia 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.02555 0.0 0.0 0.00644 0.0 0.01856 0.0 0.0 0.0 0.01325 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00872 0.0 0.0 0.0 0.01775 0.05199 0.03128 0.0 0.0 0.0202 0.11378 0.01141 0.0 0.0 0.01535 0.00739 0.05084 0.02782 0.02157 0.0 0.0 0.06848 0.01432 0.0 0.0 0.00966 0.0 0.02694 0.20127 0.04994 0.0 0.0 0.03178 0.0 0.0 0.00826 0.03613 0.0 0.08651 0.0 0.00516 0.02446 0.0 0.01937 0.09592 0.0 0.00764 0.0187 0.0 0.0 0.0 0.0 0.01071 0.0 [...]
+Bacteria|Bacteroidetes|Flavobacteriia|Flavobacteriales 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.02555 0.0 0.0 0.00644 0.0 0.01856 0.0 0.0 0.0 0.01325 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00872 0.0 0.0 0.0 0.01775 0.05199 0.03128 0.0 0.0 0.0202 0.11378 0.01141 0.0 0.0 0.01535 0.00739 0.05084 0.02782 0.02157 0.0 0.0 0.06848 0.01432 0.0 0.0 0.00966 0.0 0.02694 0.20127 0.04994 0.0 0.0 0.03178 0.0 0.0 0.00826 0.03613 0.0 0.08651 0.0 0.00516 0.02446 0.0 0.01937 0.09592 0.0 0.00764 0.0187 0.0 0.0 0.0 [...]
+Bacteria|Bacteroidetes|Flavobacteriia|Flavobacteriales|Flavobacteriaceae 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.02555 0.0 0.0 0.00644 0.0 0.01856 0.0 0.0 0.0 0.01325 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00872 0.0 0.0 0.0 0.01775 0.05199 0.03128 0.0 0.0 0.0202 0.11378 0.01141 0.0 0.0 0.01535 0.00739 0.05084 0.02782 0.02157 0.0 0.0 0.06848 0.01432 0.0 0.0 0.00966 0.0 0.02694 0.20127 0.04994 0.0 0.0 0.03178 0.0 0.0 0.00826 0.03613 0.0 0.08651 0.0 0.00516 0.02446 0.0 0.01937 0.09592 0.0 0.00764 [...]
+Bacteria|Bacteroidetes|Flavobacteriia|Flavobacteriales|Flavobacteriaceae|Capnocytophaga 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0075 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00545 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 [...]
+Bacteria|Bacteroidetes|Flavobacteriia|Flavobacteriales|Flavobacteriaceae|Capnocytophaga|Capnocytophaga_unclassified 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0075 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00545 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 [...]
+Bacteria|Bacteroidetes|Flavobacteriia|Flavobacteriales|Flavobacteriaceae|Cellulophaga 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.02555 0.0 0.0 0.00644 0.0 0.01856 0.0 0.0 0.0 0.01325 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00872 0.0 0.0 0.0 0.01775 0.05199 0.03128 0.0 0.0 0.0202 0.11378 0.01141 0.0 0.0 0.0079 0.00739 0.05084 0.02782 0.02157 0.0 0.0 0.06848 0.01432 0.0 0.0 0.00966 0.0 0.02694 0.19376 0.04994 0.0 0.0 0.03178 0.0 0.0 0.00826 0.03613 0.0 0.08651 0.0 0.00516 0.02446 0.0 0.01937 0.09592 [...]
+Bacteria|Bacteroidetes|Flavobacteriia|Flavobacteriales|Flavobacteriaceae|Cellulophaga|Cellulophaga_unclassified 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.02555 0.0 0.0 0.00644 0.0 0.01856 0.0 0.0 0.0 0.01325 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00872 0.0 0.0 0.0 0.01775 0.05199 0.03128 0.0 0.0 0.0202 0.11378 0.01141 0.0 0.0 0.0079 0.00739 0.05084 0.02782 0.02157 0.0 0.0 0.06848 0.01432 0.0 0.0 0.00966 0.0 0.02694 0.19376 0.04994 0.0 0.0 0.03178 0.0 0.0 0.00826 0.03613 0.0 0.08651 0.0 0.00516 0. [...]
+Bacteria|Bacteroidetes|Flavobacteriia|Flavobacteriales|Flavobacteriaceae|Riemerella 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00745 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Bacteroidetes|Flavobacteriia|Flavobacteriales|Flavobacteriaceae|Riemerella|Riemerella_unclassified 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00745 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
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+Bacteria|Bacteroidetes|Sphingobacteriia|Sphingobacteriales 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.02391 0.0 0.0 0.0 0.0 0.01365 0.0 0.12577 0.0 0.0 0.0 0.01668 0.0 0.0 0.0 0.0 0.02679 0.0 0.0 0.07237 0.0 0.0 0.0 0.069 0.04447 0.01673 0.0 0.00334 0.03813 0.0 0.0 0.0 0.02028 0.0 0.0091 0.03083 0.04411 0.0 0.0 0.0 0.01624 0.02281 0.0 0.0 0.0 0.02466 0.02037 0.0182 0.0 0.00265 0.0 0.04614 0.0 0.04033 0.0 0.0 0.0 0.0 0.0 0.0 0.02052 0.01367 0.08733 0.03827 0.00228 0.0 0.0 0.01093 0.0 0.0 0.0 0.0 0 [...]
+Bacteria|Bacteroidetes|Sphingobacteriia|Sphingobacteriales|Sphingobacteriaceae 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.02391 0.0 0.0 0.0 0.0 0.01365 0.0 0.12577 0.0 0.0 0.0 0.01668 0.0 0.0 0.0 0.0 0.02679 0.0 0.0 0.07237 0.0 0.0 0.0 0.069 0.04447 0.01673 0.0 0.00334 0.03813 0.0 0.0 0.0 0.02028 0.0 0.0091 0.03083 0.04411 0.0 0.0 0.0 0.01624 0.02281 0.0 0.0 0.0 0.02466 0.02037 0.0182 0.0 0.00265 0.0 0.04614 0.0 0.04033 0.0 0.0 0.0 0.0 0.0 0.0 0.02052 0.01367 0.08733 0.03827 0.00228 0.0 0.0 0.010 [...]
+Bacteria|Bacteroidetes|Sphingobacteriia|Sphingobacteriales|Sphingobacteriaceae|Pedobacter 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.02391 0.0 0.0 0.0 0.0 0.01365 0.0 0.12577 0.0 0.0 0.0 0.01668 0.0 0.0 0.0 0.0 0.02679 0.0 0.0 0.07237 0.0 0.0 0.0 0.069 0.04447 0.01673 0.0 0.0 0.03813 0.0 0.0 0.0 0.01515 0.0 0.0091 0.02503 0.04411 0.0 0.0 0.0 0.01624 0.02281 0.0 0.0 0.0 0.02466 0.02037 0.01527 0.0 0.0 0.0 0.04614 0.0 0.04033 0.0 0.0 0.0 0.0 0.0 0.0 0.02052 0.01367 0.08733 0.03827 0.0 0.0 0.0 0.010 [...]
+Bacteria|Bacteroidetes|Sphingobacteriia|Sphingobacteriales|Sphingobacteriaceae|Pedobacter|Pedobacter_unclassified 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.02391 0.0 0.0 0.0 0.0 0.01365 0.0 0.12577 0.0 0.0 0.0 0.01668 0.0 0.0 0.0 0.0 0.02679 0.0 0.0 0.07237 0.0 0.0 0.0 0.069 0.04447 0.01673 0.0 0.0 0.03813 0.0 0.0 0.0 0.01515 0.0 0.0091 0.02503 0.04411 0.0 0.0 0.0 0.01624 0.02281 0.0 0.0 0.0 0.02466 0.02037 0.01527 0.0 0.0 0.0 0.04614 0.0 0.04033 0.0 0.0 0.0 0.0 0.0 0.0 0.02052 0.01367 0.08733 0 [...]
+Bacteria|Bacteroidetes|Sphingobacteriia|Sphingobacteriales|Sphingobacteriaceae|Sphingobacterium 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00334 0.0 0.0 0.0 0.0 0.00514 0.0 0.0 0.0058 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00294 0.0 0.00265 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00228 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 [...]
+Bacteria|Bacteroidetes|Sphingobacteriia|Sphingobacteriales|Sphingobacteriaceae|Sphingobacterium|Sphingobacterium_unclassified 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00334 0.0 0.0 0.0 0.0 0.00514 0.0 0.0 0.0058 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00294 0.0 0.00265 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00228 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Candidatus_Saccharibacteria 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00706 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00138 0.00035 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
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+Bacteria|Candidatus_Saccharibacteria|Candidatus_Saccharibacteria_noname|Candidatus_Saccharibacteria_noname 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00706 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00138 0.00035 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 [...]
+Bacteria|Candidatus_Saccharibacteria|Candidatus_Saccharibacteria_noname|Candidatus_Saccharibacteria_noname|Candidatus_Saccharibacteria_noname 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00706 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00138 0.00035 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0. [...]
+Bacteria|Candidatus_Saccharibacteria|Candidatus_Saccharibacteria_noname|Candidatus_Saccharibacteria_noname|Candidatus_Saccharibacteria_noname|Candidatus_Saccharibacteria_noname 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00035 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Candidatus_Saccharibacteria|Candidatus_Saccharibacteria_noname|Candidatus_Saccharibacteria_noname|Candidatus_Saccharibacteria_noname|Candidatus_Saccharibacteria_noname_unclassified 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00706 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00138 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0. [...]
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+Bacteria|Chlamydiae|Chlamydiia 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00365 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 [...]
+Bacteria|Chlamydiae|Chlamydiia|Chlamydiales 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00365 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Chlamydiae|Chlamydiia|Chlamydiales|Chlamydiaceae 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00365 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0. [...]
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+Bacteria|Chlamydiae|Chlamydiia|Chlamydiales|Chlamydiaceae|Chlamydophila|Chlamydophila_unclassified 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00365 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 [...]
+Bacteria|Chlorobi 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01025 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00421 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00553 0.0 0.0 0.0 0.0 0.0 0.00739 0.0 0.0 0.0 0.0 0.0 0.0 0.01506 0.00346 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0. [...]
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+Bacteria|Chlorobi|Chlorobia|Chlorobiales 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01025 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00421 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00553 0.0 0.0 0.0 0.0 0.0 0.00739 0.0 0.0 0.0 0.0 0.0 0.0 0.01506 0.00346 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Chlorobi|Chlorobia|Chlorobiales|Chlorobiaceae 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01025 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00421 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00553 0.0 0.0 0.0 0.0 0.0 0.00739 0.0 0.0 0.0 0.0 0.0 0.0 0.01506 0.00346 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 [...]
+Bacteria|Chlorobi|Chlorobia|Chlorobiales|Chlorobiaceae|Chlorobium 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01025 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00421 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00553 0.0 0.0 0.0 0.0 0.0 0.00739 0.0 0.0 0.0 0.0 0.0 0.0 0.01506 0.00346 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0. [...]
+Bacteria|Chlorobi|Chlorobia|Chlorobiales|Chlorobiaceae|Chlorobium|Chlorobium_phaeobacteroides 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01025 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00421 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00553 0.0 0.0 0.0 0.0 0.0 0.00739 0.0 0.0 0.0 0.0 0.0 0.0 0.01506 0.00346 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0. [...]
+Bacteria|Deinococcus_Thermus 0.0 0.00966 0.02036 0.0 0.0 0.0343 0.0 0.0 0.02517 0.0 0.04231 0.05458 0.0 0.01705 0.0 0.0 0.0 0.0 0.0 0.01756 0.0 0.0 0.0 0.03248 0.02522 0.0 0.0 0.0 0.02685 0.01032 0.01368 0.01176 0.01148 0.0 0.02418 0.0472 0.03345 0.02512 0.10583 0.00656 0.07501 0.05757 0.01959 0.0 0.00921 0.0 0.01137 0.0 0.02592 0.00949 0.0 0.0085 0.03841 0.01896 0.04759 0.04729 0.02757 0.00622 0.03095 0.01684 0.00642 0.03218 0.02736 0.06383 0.0474 0.00573 0.0097 0.00684 0.0216 0.00724 0 [...]
+Bacteria|Deinococcus_Thermus|Deinococci 0.0 0.00966 0.02036 0.0 0.0 0.0343 0.0 0.0 0.02517 0.0 0.04231 0.05458 0.0 0.01705 0.0 0.0 0.0 0.0 0.0 0.01756 0.0 0.0 0.0 0.03248 0.02522 0.0 0.0 0.0 0.02685 0.01032 0.01368 0.01176 0.01148 0.0 0.02418 0.0472 0.03345 0.02512 0.10583 0.00656 0.07501 0.05757 0.01959 0.0 0.00921 0.0 0.01137 0.0 0.02592 0.00949 0.0 0.0085 0.03841 0.01896 0.04759 0.04729 0.02757 0.00622 0.03095 0.01684 0.00642 0.03218 0.02736 0.06383 0.0474 0.00573 0.0097 0.00684 0.021 [...]
+Bacteria|Deinococcus_Thermus|Deinococci|Deinococcales 0.0 0.00966 0.02036 0.0 0.0 0.0343 0.0 0.0 0.02517 0.0 0.04231 0.05458 0.0 0.01705 0.0 0.0 0.0 0.0 0.0 0.01756 0.0 0.0 0.0 0.03248 0.02522 0.0 0.0 0.0 0.02685 0.01032 0.01368 0.01176 0.01148 0.0 0.02418 0.0472 0.03345 0.02512 0.10583 0.00656 0.07501 0.05757 0.01959 0.0 0.00921 0.0 0.01137 0.0 0.02592 0.00949 0.0 0.0085 0.03841 0.01896 0.04759 0.04729 0.02757 0.00622 0.03095 0.01684 0.00642 0.03218 0.02736 0.06383 0.0474 0.00573 0.0097 [...]
+Bacteria|Deinococcus_Thermus|Deinococci|Deinococcales|Deinococcaceae 0.0 0.00966 0.02036 0.0 0.0 0.0343 0.0 0.0 0.02517 0.0 0.04231 0.05458 0.0 0.01705 0.0 0.0 0.0 0.0 0.0 0.01756 0.0 0.0 0.0 0.03248 0.02522 0.0 0.0 0.0 0.02685 0.01032 0.01368 0.01176 0.01148 0.0 0.02418 0.0472 0.03345 0.02512 0.10583 0.00656 0.07501 0.05757 0.01959 0.0 0.00921 0.0 0.01137 0.0 0.02592 0.00949 0.0 0.0085 0.03841 0.01896 0.04759 0.04729 0.02757 0.00622 0.03095 0.01684 0.00642 0.03218 0.02736 0.06383 0.0474 [...]
+Bacteria|Deinococcus_Thermus|Deinococci|Deinococcales|Deinococcaceae|Deinococcus 0.0 0.00966 0.02036 0.0 0.0 0.0343 0.0 0.0 0.02517 0.0 0.04231 0.05458 0.0 0.01705 0.0 0.0 0.0 0.0 0.0 0.01756 0.0 0.0 0.0 0.03248 0.02522 0.0 0.0 0.0 0.02685 0.01032 0.01368 0.01176 0.01148 0.0 0.02418 0.0472 0.03345 0.02512 0.10583 0.00656 0.07501 0.05757 0.01959 0.0 0.00921 0.0 0.01137 0.0 0.02592 0.00949 0.0 0.0085 0.03841 0.01896 0.04759 0.04729 0.02757 0.00622 0.03095 0.01684 0.00642 0.03218 0.02736 0. [...]
+Bacteria|Deinococcus_Thermus|Deinococci|Deinococcales|Deinococcaceae|Deinococcus|Deinococcus_unclassified 0.0 0.00966 0.02036 0.0 0.0 0.0343 0.0 0.0 0.02517 0.0 0.04231 0.05458 0.0 0.01705 0.0 0.0 0.0 0.0 0.0 0.01756 0.0 0.0 0.0 0.03248 0.02522 0.0 0.0 0.0 0.02685 0.01032 0.01368 0.01176 0.01148 0.0 0.02418 0.0472 0.03345 0.02512 0.10583 0.00656 0.07501 0.05757 0.01959 0.0 0.00921 0.0 0.01137 0.0 0.02592 0.00949 0.0 0.0085 0.03841 0.01896 0.04759 0.04729 0.02757 0.00622 0.03095 0.01684 0 [...]
+Bacteria|Firmicutes 0.0 61.05187 69.90618 0.0 0.0 42.06506 0.0 0.0 72.79307 0.0 48.7525 44.09137 0.0 42.32704 0.0 41.90917 0.0 0.0 0.0 28.1693 51.77764 0.0 0.0 30.87981 48.39534 34.99255 0.0 30.94834 82.86691 75.67178 27.59855 67.52794 19.77397 51.09189 59.6659 45.53797 54.14307 36.753 55.22095 52.33948 60.49657 51.06192 74.13932 46.83647 49.1327 40.20125 58.78853 42.19709 62.23858 56.37253 72.75084 84.72997 59.10612 50.5835 68.41898 37.30029 45.89704 61.15039 60.65978 26.38295 63.98752 [...]
+Bacteria|Firmicutes|Bacilli 0.0 0.1888 15.64664 0.0 0.0 0.12085 0.0 0.0 0.11567 0.0 0.2618 0.0194 0.0 0.01496 0.0 0.09102 0.0 0.0 0.0 0.01792 0.17842 0.0 0.0 0.018 0.22956 0.0112 0.0 0.0076 0.98279 0.1298 0.08073 0.13696 0.06375 0.95155 0.01335 0.12235 0.03984 0.0057 0.30928 0.35868 0.00075 0.02795 0.01643 0.12857 0.05779 0.09638 0.04442 0.02432 0.21271 0.01819 0.31679 0.22781 0.01827 0.15509 0.06322 0.00692 0.32235 0.05008 0.01039 0.04213 0.01221 0.07302 0.12975 0.10112 0.0057 0.03353 0 [...]
+Bacteria|Firmicutes|Bacilli|Bacillales 0.0 0.00128 0.00893 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00226 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00414 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00587 0.0 0.00092 0.0 0.0 0.0 0.00917 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.02784 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 [...]
+Bacteria|Firmicutes|Bacilli|Bacillales|Alicyclobacillaceae 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00587 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 [...]
+Bacteria|Firmicutes|Bacilli|Bacillales|Alicyclobacillaceae|Alicyclobacillus 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00587 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Firmicutes|Bacilli|Bacillales|Alicyclobacillaceae|Alicyclobacillus|Alicyclobacillus_unclassified 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00587 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0. [...]
+Bacteria|Firmicutes|Bacilli|Bacillales|Bacillales_noname 0.0 0.00128 0.00893 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00226 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00414 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00092 0.0 0.0 0.0 0.00917 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.02784 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Firmicutes|Bacilli|Bacillales|Bacillales_noname|Gemella 0.0 0.00128 0.00893 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00226 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00414 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00092 0.0 0.0 0.0 0.00917 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.02784 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Firmicutes|Bacilli|Bacillales|Bacillales_noname|Gemella|Gemella_haemolysans 0.0 0.0 0.00235 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Firmicutes|Bacilli|Bacillales|Bacillales_noname|Gemella|Gemella_morbillorum 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00679 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.02606 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Firmicutes|Bacilli|Bacillales|Bacillales_noname|Gemella|Gemella_sanguinis 0.0 0.0 0.00514 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00178 0.0 0.0 0.0 0.0 0.0 0 [...]
+Bacteria|Firmicutes|Bacilli|Bacillales|Bacillales_noname|Gemella|Gemella_unclassified 0.0 0.00128 0.00144 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00226 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00414 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00092 0.0 0.0 0.0 0.00238 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0. [...]
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+Bacteria|Firmicutes|Bacilli|Bacillales|Staphylococcaceae|Staphylococcus 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
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+Bacteria|Firmicutes|Bacilli|Lactobacillales|Carnobacteriaceae|Granulicatella 0.0 0.0 0.03104 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00513 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0032 0.0 0.0 0.00147 0.00338 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0029 0.0 0.00359 0.00404 0.0 0.0 0.01007 0.00465 0.0 0.0 0.00341 0.0 0.0 0.00598 0.0 0.00127 0.00958 0.0 0.0 0.0 0.0 0.0 0 [...]
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+Bacteria|Firmicutes|Bacilli|Lactobacillales|Carnobacteriaceae|Granulicatella|Granulicatella_unclassified 0.0 0.0 0.01991 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00513 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0032 0.0 0.0 0.00147 0.00338 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0029 0.0 0.00359 0.00404 0.0 0.0 0.01007 0.00465 0.0 0.0 0.00341 0.0 0.0 0.00598 0.0 0.00127 0 [...]
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+Bacteria|Firmicutes|Bacilli|Lactobacillales|Lactobacillaceae|Pediococcus 0.0 0.0 0.42937 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Firmicutes|Bacilli|Lactobacillales|Lactobacillaceae|Pediococcus|Pediococcus_acidilactici 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0. [...]
+Bacteria|Firmicutes|Bacilli|Lactobacillales|Lactobacillaceae|Pediococcus|Pediococcus_pentosaceus 0.0 0.0 0.42937 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Firmicutes|Bacilli|Lactobacillales|Lactobacillaceae|Pediococcus|Pediococcus_unclassified 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0. [...]
+Bacteria|Firmicutes|Bacilli|Lactobacillales|Leuconostocaceae 0.0 0.0 5.79225 0.0 0.0 0.0 0.0 0.0 0.00575 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00491 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01335 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.02982 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.02106 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Firmicutes|Bacilli|Lactobacillales|Leuconostocaceae|Leuconostoc 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00575 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00491 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Firmicutes|Bacilli|Lactobacillales|Leuconostocaceae|Leuconostoc|Leuconostoc_lactis 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Firmicutes|Bacilli|Lactobacillales|Leuconostocaceae|Leuconostoc|Leuconostoc_mesenteroides 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 [...]
+Bacteria|Firmicutes|Bacilli|Lactobacillales|Leuconostocaceae|Leuconostoc|Leuconostoc_unclassified 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00575 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00491 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0. [...]
+Bacteria|Firmicutes|Bacilli|Lactobacillales|Leuconostocaceae|Weissella 0.0 0.0 5.79225 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01335 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.02982 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.02106 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 [...]
+Bacteria|Firmicutes|Bacilli|Lactobacillales|Leuconostocaceae|Weissella|Weissella_cibaria 0.0 0.0 0.02056 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00593 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Firmicutes|Bacilli|Lactobacillales|Leuconostocaceae|Weissella|Weissella_confusa 0.0 0.0 4.44323 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Firmicutes|Bacilli|Lactobacillales|Leuconostocaceae|Weissella|Weissella_unclassified 0.0 0.0 1.32847 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01335 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.02982 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01513 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0. [...]
+Bacteria|Firmicutes|Bacilli|Lactobacillales|Streptococcaceae 0.0 0.13083 7.2575 0.0 0.0 0.02862 0.0 0.0 0.10992 0.0 0.2618 0.01824 0.0 0.01496 0.0 0.08632 0.0 0.0 0.0 0.01792 0.17842 0.0 0.0 0.01309 0.05928 0.0112 0.0 0.0076 0.27056 0.03243 0.05778 0.00675 0.00363 0.84053 0.0 0.12235 0.03984 0.0057 0.30928 0.35868 0.00075 0.02381 0.01643 0.12857 0.02797 0.09638 0.04442 0.02432 0.0 0.01272 0.16898 0.09232 0.01782 0.15188 0.05135 0.00692 0.31766 0.04671 0.01039 0.04213 0.00305 0.04316 0.12 [...]
+Bacteria|Firmicutes|Bacilli|Lactobacillales|Streptococcaceae|Lactococcus 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.07473 0.0 0.0 0.00331 0.0 0.0 0.0 0.02936 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00323 0.0 0.0 0.0 0.03451 0.0 0.0 0.0 0.04354 0.0 0.0 0.0 0.0 0.0 0.0 0.09313 0.00852 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00429 0.0 0.0 0.00067 0.00114 0.0 0.00895 0.0 0.0 0.0 0.0 0.0 0.0 0.00566 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01314 0.0 [...]
+Bacteria|Firmicutes|Bacilli|Lactobacillales|Streptococcaceae|Lactococcus|Lactococcus_lactis 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.07349 0.0 0.0 0.00331 0.0 0.0 0.0 0.02936 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00323 0.0 0.0 0.0 0.03451 0.0 0.0 0.0 0.04354 0.0 0.0 0.0 0.0 0.0 0.0 0.09313 0.00852 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00429 0.0 0.0 0.00067 0.00114 0.0 0.00895 0.0 0.0 0.0 0.0 0.0 0.0 0.00566 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Firmicutes|Bacilli|Lactobacillales|Streptococcaceae|Lactococcus|Lactococcus_raffinolactis 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00124 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 [...]
+Bacteria|Firmicutes|Bacilli|Lactobacillales|Streptococcaceae|Streptococcus 0.0 0.13083 7.2575 0.0 0.0 0.02862 0.0 0.0 0.03519 0.0 0.2618 0.01493 0.0 0.01496 0.0 0.05696 0.0 0.0 0.0 0.01792 0.17842 0.0 0.0 0.01309 0.05928 0.0112 0.0 0.0076 0.27056 0.03243 0.05778 0.00675 0.00363 0.84053 0.0 0.11912 0.03984 0.0057 0.30928 0.32417 0.00075 0.02381 0.01643 0.08504 0.02797 0.09638 0.04442 0.02432 0.0 0.01272 0.07585 0.08381 0.01782 0.15188 0.05135 0.00692 0.31766 0.04671 0.01039 0.04213 0.0030 [...]
+Bacteria|Firmicutes|Bacilli|Lactobacillales|Streptococcaceae|Streptococcus|Streptococcus_anginosus 0.0 0.0 0.5371 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0029 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00163 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00379 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Firmicutes|Bacilli|Lactobacillales|Streptococcaceae|Streptococcus|Streptococcus_australis 0.0 0.0 0.13401 0.0 0.0 0.0 0.0 0.0 0.00358 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01279 0.0 0.0 0.0 0.0 0.0093 0.0 0.00103 0.0 0.00211 0.0 0.0 0.0 0.00869 0.0 0.00529 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01943 0.0 0.0 0.0 0.0 0.0 0.0 0.0017 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00994 0.0 0.0 0.0 0.0 0.0 0.0 0.01005 0.0 0.0 0.0 0.0 0.0 0.00787 0.0 [...]
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+Bacteria|Firmicutes|Bacilli|Lactobacillales|Streptococcaceae|Streptococcus|Streptococcus_cristatus 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 [...]
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+Bacteria|Firmicutes|Bacilli|Lactobacillales|Streptococcaceae|Streptococcus|Streptococcus_mitis_oralis_pneumoniae 0.0 0.00144 0.00326 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00487 0.00062 0.00042 0.0 0.0 0.0097 0.0 0.0 0.0 0.0 0.0 0.0 0.00075 0.00467 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00103 0.0 0.0 0.0 0.0 0.0 0.00076 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00034 0.0 0.0 0.0013 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00081 0 [...]
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+Bacteria|Firmicutes|Bacilli|Lactobacillales|Streptococcaceae|Streptococcus|Streptococcus_salivarius 0.0 0.01606 1.50647 0.0 0.0 0.01471 0.0 0.0 0.00242 0.0 0.06114 0.00977 0.0 0.01038 0.0 0.01008 0.0 0.0 0.0 0.00023 0.13252 0.0 0.0 0.01183 0.05108 0.0112 0.0 0.0076 0.10282 0.01736 0.0344 0.0 0.00363 0.46499 0.0 0.04104 0.01425 0.00359 0.27161 0.22027 0.0 0.00071 0.00808 0.05334 0.01494 0.07121 0.03778 0.02259 0.0 0.01272 0.01594 0.04948 0.00996 0.10361 0.00982 0.00692 0.01735 0.0161 0.0 [...]
+Bacteria|Firmicutes|Bacilli|Lactobacillales|Streptococcaceae|Streptococcus|Streptococcus_sanguinis 0.0 0.0 0.25888 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.02153 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.02491 0.0 0.02235 0.0 0.0 0.00882 0.0 0.0 0.0 0 [...]
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+Bacteria|Firmicutes|Bacilli|Lactobacillales|Streptococcaceae|Streptococcus|Streptococcus_tigurinus 0.0 0.0 0.01062 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 [...]
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+Bacteria|Firmicutes|Clostridia|Clostridiales|Clostridiaceae|Clostridium|Clostridium_bolteae 0.0 0.31004 0.00507 0.0 0.0 0.01758 0.0 0.0 0.00585 0.0 0.0 0.00963 0.0 0.0 0.0 2.69047 0.0 0.0 0.0 0.04384 0.01025 0.0 0.0 0.0 0.0 0.01187 0.0 1.28399 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.02679 0.0 0.0 0.00194 0.00283 0.0 0.0 0.0 0.00144 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00028 0.0 0.01417 0.03389 0.00146 0.0 0.0 0.04189 0.09185 0.0 0.0 0.0 0.0 0.0 1.8536 0.0 0.0 0.0 0.0 0.0 0.76278 0.00678 0.58337 0.0 0 [...]
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+Bacteria|Firmicutes|Clostridia|Clostridiales|Eubacteriaceae|Eubacterium|Eubacterium_hallii 0.0 0.58819 0.22083 0.0 0.0 0.45254 0.0 0.0 0.19047 0.0 0.67432 0.24395 0.0 0.12914 0.0 0.24351 0.0 0.0 0.0 0.18782 1.30362 0.0 0.0 0.1585 1.1131 0.56729 0.0 0.18139 0.2832 0.22921 0.08252 0.22624 0.11129 0.52846 0.09532 0.22234 0.0708 0.19795 0.39282 0.39355 0.27769 0.45338 0.12048 0.75781 0.28429 0.18152 0.47585 0.16668 0.3416 0.09758 0.11002 0.42803 0.03316 0.41839 0.61707 0.10017 0.24028 0.2797 [...]
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+Bacteria|Firmicutes|Clostridia|Clostridiales|Eubacteriaceae|Eubacterium|Eubacterium_ramulus 0.0 0.47835 0.0 0.0 0.0 0.06439 0.0 0.0 0.05326 0.0 0.2103 0.02018 0.0 0.01082 0.0 0.44944 0.0 0.0 0.0 0.0 0.03404 0.0 0.0 0.0997 0.00914 0.46944 0.0 0.25029 0.07869 0.06201 0.10135 0.04084 0.02694 0.04299 0.03039 0.08391 0.0073 0.05206 0.05966 0.11684 0.03154 0.02215 0.03015 0.24633 0.18397 0.0 0.13276 0.08605 0.07031 0.01326 0.0712 0.05691 0.03019 0.11044 0.01581 0.0 0.13323 0.17517 0.06455 0.0 [...]
+Bacteria|Firmicutes|Clostridia|Clostridiales|Eubacteriaceae|Eubacterium|Eubacterium_rectale 0.0 29.66393 0.23827 0.0 0.0 0.04337 0.0 0.0 0.67137 0.0 2.09966 1.04488 0.0 0.62197 0.0 2.03445 0.0 0.0 0.0 0.79829 2.28791 0.0 0.0 0.99569 8.59565 1.87174 0.0 4.37929 2.29243 1.90723 1.27438 2.13935 1.09063 4.89643 4.40074 4.8405 1.38171 2.00889 4.77425 13.14333 4.54732 5.66181 2.44938 1.11621 8.03213 1.25197 1.4091 0.27043 2.67719 2.53863 4.72562 7.45819 7.33218 0.38884 15.99173 4.77301 5.42302 [...]
+Bacteria|Firmicutes|Clostridia|Clostridiales|Eubacteriaceae|Eubacterium|Eubacterium_siraeum 0.0 8.2533 2.41346 0.0 0.0 0.00614 0.0 0.0 21.22966 0.0 0.60694 0.12542 0.0 0.04239 0.0 4.43856 0.0 0.0 0.0 0.0 0.19561 0.0 0.0 4.82882 2.45937 0.20912 0.0 1.94915 0.14887 4.79325 0.35641 18.82689 0.05773 1.90048 1.61895 0.52265 26.07423 0.55384 3.05856 0.02987 7.73512 0.46239 0.14284 0.00166 0.2107 2.46382 1.89378 0.0 1.15246 23.69863 2.93749 11.48699 3.06613 3.0925 2.54638 1.50832 0.52337 6.7297 [...]
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+Bacteria|Firmicutes|Clostridia|Clostridiales|Lachnospiraceae|Anaerostipes|Anaerostipes_unclassified 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00097 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01181 0.0 0.0 0.0 0.0 0.00 [...]
+Bacteria|Firmicutes|Clostridia|Clostridiales|Lachnospiraceae|Blautia 0.0 1.7164 1.13876 0.0 0.0 0.83294 0.0 0.0 1.00312 0.0 1.73223 0.9954 0.0 5.3597 0.0 3.14297 0.0 0.0 0.0 1.52752 2.47438 0.0 0.0 1.21387 1.70849 3.76119 0.0 1.46252 1.3372 1.65742 1.1383 1.96263 0.65484 2.66727 3.6477 1.58675 1.09112 1.55848 1.13574 1.54856 1.33695 1.16171 1.39483 4.31993 1.93643 9.87873 1.62828 1.84479 1.75179 0.89948 0.67459 1.85326 1.08051 2.15554 3.05931 0.6923 2.30972 1.74238 0.7478 0.45098 3.62363 [...]
+Bacteria|Firmicutes|Clostridia|Clostridiales|Lachnospiraceae|Blautia|Blautia_hansenii 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0. [...]
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+Bacteria|Firmicutes|Clostridia|Clostridiales|Lachnospiraceae|Blautia|Ruminococcus_gnavus 0.0 0.0 0.0 0.0 0.0 0.00094 0.0 0.0 0.00136 0.0 0.0 0.00015 0.0 4.12475 0.0 0.00034 0.0 0.0 0.0 0.00928 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01464 0.0 8.20172 0.0 0.0 0.00607 0.0 0.0 0.0 0.20824 0.0 0.0 0.0 0.0 0.0 0.0 0.00472 0.10102 0.0 0.0 0.0 0.0 0.00736 0.05286 0.0 0.0 0.0 0.0 0.00775 0.16853 0.0 0.0 0.0 0.0 0.0 0.09047 0.0 0.0 0.0 0.0025 [...]
+Bacteria|Firmicutes|Clostridia|Clostridiales|Lachnospiraceae|Blautia|Ruminococcus_obeum 0.0 0.20702 0.20831 0.0 0.0 0.3113 0.0 0.0 0.17242 0.0 0.29323 0.23541 0.0 0.09315 0.0 0.42559 0.0 0.0 0.0 0.06259 0.85043 0.0 0.0 0.13691 0.42186 0.58254 0.0 0.19482 0.13888 0.2534 0.33858 0.23813 0.06917 0.49452 0.42721 0.18219 0.18094 0.22351 0.21987 0.39154 0.26069 0.27181 0.10415 1.2988 0.38912 0.2496 0.49211 0.41417 0.40968 0.07274 0.22365 0.39033 0.16466 0.12676 0.442 0.18974 0.43451 0.36735 0. [...]
+Bacteria|Firmicutes|Clostridia|Clostridiales|Lachnospiraceae|Blautia|Ruminococcus_torques 0.0 1.49897 0.93045 0.0 0.0 0.5207 0.0 0.0 0.82934 0.0 1.43899 0.75984 0.0 1.1418 0.0 2.71705 0.0 0.0 0.0 1.45565 1.61527 0.0 0.0 1.07696 1.28663 3.17865 0.0 1.26438 1.19832 1.40402 0.79972 1.7245 0.58566 2.17275 3.22049 1.40457 0.91018 1.33497 0.91588 1.14394 1.07626 0.8899 1.29068 3.00649 1.54731 1.42742 1.13617 1.43062 1.33603 0.82675 0.45094 1.46292 0.70761 2.02878 2.61731 0.50255 1.8752 1.37502 [...]
+Bacteria|Firmicutes|Clostridia|Clostridiales|Lachnospiraceae|Butyrivibrio 0.0 0.02812 0.01588 0.0 0.0 10.92035 0.0 0.0 0.25143 0.0 0.2002 0.08734 0.0 0.08688 0.0 0.12524 0.0 0.0 0.0 0.02054 0.0 0.0 0.0 0.02837 2.85195 0.08193 0.0 0.05626 8.03051 32.48674 0.05975 3.66634 0.05013 0.25951 0.49346 0.03681 0.13635 0.1311 2.41217 0.07307 1.54675 1.4513 25.06396 0.17019 0.17437 0.0 0.05071 0.01801 30.22452 0.1519 3.33008 9.34581 2.35969 6.86614 0.07422 0.0376 0.17648 4.57015 3.58878 0.05859 0.0 [...]
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+Bacteria|Firmicutes|Clostridia|Clostridiales|Lachnospiraceae|Butyrivibrio|Butyrivibrio_unclassified 0.0 0.02812 0.01588 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.2002 0.08691 0.0 0.08688 0.0 0.12524 0.0 0.0 0.0 0.02054 0.0 0.0 0.0 0.02837 0.0 0.08193 0.0 0.05626 0.0 0.0 0.05975 0.0 0.05013 0.25951 0.48098 0.03681 0.13635 0.1311 0.0 0.07307 0.0 0.0 0.0 0.17019 0.17437 0.0 0.05071 0.01801 0.0 0.1519 0.0 0.0 0.0 0.0 0.06704 0.0376 0.17648 0.0 0.0 0.05859 0.01801 0.0 0.08543 0.0 0.03523 0.08517 0.08652 [...]
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+Bacteria|Firmicutes|Clostridia|Clostridiales|Lachnospiraceae|Coprococcus|Coprococcus_catus 0.0 0.09242 0.12623 0.0 0.0 0.15116 0.0 0.0 0.25981 0.0 0.2033 0.09913 0.0 0.00405 0.0 0.07468 0.0 0.0 0.0 0.03888 0.08992 0.0 0.0 0.09567 0.42043 0.39902 0.0 0.05955 0.34672 0.31355 0.0918 0.15407 0.02712 0.19531 0.25883 0.12198 0.1018 0.08717 0.09461 0.13261 0.52519 0.12646 0.12269 0.43842 0.23128 0.02767 0.0856 0.10005 0.18975 0.17275 0.05526 0.17287 0.1179 0.12266 0.03922 0.11315 0.1582 0.39338 [...]
+Bacteria|Firmicutes|Clostridia|Clostridiales|Lachnospiraceae|Coprococcus|Coprococcus_comes 0.0 0.84286 0.34728 0.0 0.0 0.52852 0.0 0.0 0.37467 0.0 0.71115 0.56756 0.0 0.22074 0.0 0.09125 0.0 0.0 0.0 0.93286 0.88361 0.0 0.0 0.71359 1.10756 0.63638 0.0 0.20882 1.10475 0.38049 0.38572 0.39772 0.05553 0.16294 0.51097 0.48404 0.18539 0.24727 0.46075 1.14489 0.24249 0.20343 0.21337 1.17901 0.7038 0.10572 0.22706 0.72455 0.53056 0.05766 0.98682 0.57747 0.68355 0.29703 0.36922 0.31064 0.20444 0. [...]
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+Bacteria|Firmicutes|Clostridia|Clostridiales|Lachnospiraceae|Coprococcus|Coprococcus_sp_ART55_1 0.0 0.0 3.05192 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.53314 0.0 0.0 0.0 0.0 0.0 0.0 0.71037 0.0 0.0 1.36773 0.9764 2.00768 0.0 0.0 7.47389 0.0 0.0 0.0 1.77084 0.0 0.0 0.0 0.59433 0.74581 0.37432 0.0 4.14085 6.82344 0.0 0.0 5.5857 0.0 0.0 0.0 4.77711 3.50563 5.1025 0.41909 1.59922 0.0 3.21541 0.5087 0.0 0.7553 0.0 0.0 0.0 5.44125 2.53741 3.62 1.17225 0.0 0.0 0.0 3.49542 0.0 0.0 0.0 0.0 2.76 [...]
+Bacteria|Firmicutes|Clostridia|Clostridiales|Lachnospiraceae|Dorea 0.0 0.37749 0.8907 0.0 0.0 0.82103 0.0 0.0 0.81649 0.0 1.14155 1.28725 0.0 0.41187 0.0 0.95488 0.0 0.0 0.0 0.09331 0.44627 0.0 0.0 1.00671 0.49032 1.3089 0.0 0.36058 1.30216 1.43985 0.396 0.55929 0.25923 0.44776 0.56901 1.15218 0.46917 0.74172 0.27067 1.79924 3.79507 0.31453 0.22053 0.9289 0.35926 0.07645 0.6327 0.55749 2.2509 1.48691 1.48019 1.91607 0.11041 0.69661 0.84832 0.27815 0.68669 1.4807 1.50304 0.04237 1.59732 0 [...]
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+Bacteria|Firmicutes|Clostridia|Clostridiales|Lachnospiraceae|Dorea|Dorea_longicatena 0.0 0.1192 0.85951 0.0 0.0 0.52815 0.0 0.0 0.65981 0.0 0.99876 1.11439 0.0 0.32079 0.0 0.6365 0.0 0.0 0.0 0.0 0.2927 0.0 0.0 0.79446 0.24442 0.73706 0.0 0.04192 1.02181 0.98546 0.28781 0.37384 0.19632 0.1886 0.4452 1.0554 0.40633 0.48674 0.09994 1.52971 3.63117 0.23282 0.12801 0.54355 0.14718 0.0 0.23736 0.30003 1.93656 1.40955 1.33712 1.19804 0.04047 0.33639 0.7066 0.25242 0.40131 1.10016 1.276 0.0 1.44 [...]
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+Bacteria|Firmicutes|Clostridia|Clostridiales|Lachnospiraceae|Lachnospiraceae_noname 0.0 1.70893 1.15618 0.0 0.0 0.84559 0.0 0.0 0.10294 0.0 0.80205 0.25253 0.0 0.34664 0.0 0.2944 0.0 0.0 0.0 0.38544 1.45826 0.0 0.0 1.99918 1.09856 1.33103 0.0 4.53947 0.88916 0.16473 0.02821 0.34812 0.4105 0.18525 0.18767 0.30954 0.1311 0.34069 1.6339 0.20698 0.77981 0.93953 0.37012 1.19886 1.41469 0.59909 0.5567 0.32129 0.07429 0.20492 1.96823 1.94991 0.44476 0.20877 0.31874 0.4327 1.27582 0.12898 0.4324 [...]
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+Bacteria|Firmicutes|Clostridia|Clostridiales|Lachnospiraceae|Lachnospiraceae_noname|Lachnospiraceae_bacterium_3_1_46FAA 0.0 0.07923 0.54532 0.0 0.0 0.29915 0.0 0.0 0.07621 0.0 0.10432 0.01082 0.0 0.23809 0.0 0.06487 0.0 0.0 0.0 0.2991 1.16413 0.0 0.0 1.83448 0.12681 0.74218 0.0 0.63038 0.0 0.10512 0.00441 0.20065 0.03541 0.07461 0.11613 0.04106 0.00473 0.09868 1.37851 0.0 0.05751 0.04019 0.33733 0.89136 0.05003 0.3177 0.10248 0.13623 0.00204 0.13532 1.48352 1.22591 0.00899 0.0 0.09256 0. [...]
+Bacteria|Firmicutes|Clostridia|Clostridiales|Lachnospiraceae|Lachnospiraceae_noname|Lachnospiraceae_bacterium_3_1_57FAA_CT1 0.0 0.00676 0.10135 0.0 0.0 0.0 0.0 0.0 0.00055 0.0 0.00283 0.09022 0.0 0.00745 0.0 0.0 0.0 0.0 0.0 0.0 0.00692 0.0 0.0 0.0 0.0 0.00823 0.0 0.00455 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.03448 0.0 0.0 0.0 0.00142 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00672 0.0 0.00801 0.0 0.0 0.0 0.0 0.03433 0.00711 0.0 0.0 0.0 0.0 0.0 0.0056 0.00105 0.0 0.03767 0.0 0.0 0.12521 0 [...]
+Bacteria|Firmicutes|Clostridia|Clostridiales|Lachnospiraceae|Lachnospiraceae_noname|Lachnospiraceae_bacterium_4_1_37FAA 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Firmicutes|Clostridia|Clostridiales|Lachnospiraceae|Lachnospiraceae_noname|Lachnospiraceae_bacterium_5_1_57FAA 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00544 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00316 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Firmicutes|Clostridia|Clostridiales|Lachnospiraceae|Lachnospiraceae_noname|Lachnospiraceae_bacterium_5_1_63FAA 0.0 0.01562 0.00364 0.0 0.0 0.04017 0.0 0.0 0.00467 0.0 0.08511 0.09049 0.0 0.0057 0.0 0.01866 0.0 0.0 0.0 0.01191 0.02507 0.0 0.0 0.04921 0.05347 0.07903 0.0 0.02682 0.0116 0.01564 0.00414 0.05164 0.00346 0.06348 0.00436 0.03818 0.01319 0.00747 0.07937 0.05783 0.10444 0.06857 0.01485 0.07973 0.07187 0.0 0.10739 0.02015 0.01096 0.00117 0.02569 0.02543 0.01186 0.02393 0. [...]
+Bacteria|Firmicutes|Clostridia|Clostridiales|Lachnospiraceae|Lachnospiraceae_noname|Lachnospiraceae_bacterium_6_1_63FAA 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00039 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Firmicutes|Clostridia|Clostridiales|Lachnospiraceae|Lachnospiraceae_noname|Lachnospiraceae_bacterium_7_1_58FAA 0.0 0.26645 0.02694 0.0 0.0 0.03358 0.0 0.0 0.01249 0.0 0.60979 0.061 0.0 0.03205 0.0 0.21086 0.0 0.0 0.0 0.03389 0.24917 0.0 0.0 0.08419 0.36198 0.05585 0.0 0.13755 0.06902 0.01752 0.01966 0.08375 0.01204 0.01422 0.06718 0.02524 0.03952 0.07604 0.12138 0.0999 0.06057 0.03638 0.01794 0.05779 0.04948 0.2814 0.05454 0.0688 0.06129 0.02272 0.03806 0.49384 0.04968 0.03803 0 [...]
+Bacteria|Firmicutes|Clostridia|Clostridiales|Lachnospiraceae|Lachnospiraceae_noname|Lachnospiraceae_bacterium_8_1_57FAA 0.0 0.0 0.0 0.0 0.0 0.46651 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0313 0.34436 0.0 0.0 0.0 0.80855 0.0 0.0 0.0 0.3596 0.0 0.0 0.17059 0.06448 0.0 0.05464 0.04744 0.55728 0.79439 0.0 0.0 1.24332 0.0 0.27402 0.09356 0.0 0.04572 0.42096 0.20473 0.33935 0.10661 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.36887 0.36918 0.0 0.03807 0.08284 0.0 0.0 0.07619 0. [...]
+Bacteria|Firmicutes|Clostridia|Clostridiales|Lachnospiraceae|Lachnospiraceae_noname|Lachnospiraceae_bacterium_9_1_43BFAA 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00956 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00024 0.0 0.0 0.00021 0.0 0.00091 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
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+Bacteria|Firmicutes|Clostridia|Clostridiales|Lachnospiraceae|Marvinbryantia|Marvinbryantia_formatexigens 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00131 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Firmicutes|Clostridia|Clostridiales|Lachnospiraceae|Oribacterium 0.0 0.0 0.00064 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00111 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0033 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Firmicutes|Clostridia|Clostridiales|Lachnospiraceae|Oribacterium|Oribacterium_sinus 0.0 0.0 0.00064 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00111 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0033 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Firmicutes|Clostridia|Clostridiales|Lachnospiraceae|Roseburia 0.0 1.36277 2.1828 0.0 0.0 1.52091 0.0 0.0 0.90813 0.0 6.65819 0.82506 0.0 1.40161 0.0 6.44582 0.0 0.0 0.0 0.52422 2.38044 0.0 0.0 0.65411 1.69719 1.79731 0.0 1.2983 3.68064 2.43018 3.63328 1.38757 1.06039 2.17754 2.38462 2.29979 1.84628 7.25479 1.54374 1.10215 1.03684 0.31953 2.96149 6.87726 4.50437 1.39294 0.71202 5.78498 1.14846 2.27197 1.80611 1.36412 2.31806 6.19148 2.72423 0.95477 10.5443 1.77478 0.57777 0.78647 [...]
+Bacteria|Firmicutes|Clostridia|Clostridiales|Lachnospiraceae|Roseburia|Roseburia_hominis 0.0 0.12107 0.80628 0.0 0.0 0.12566 0.0 0.0 0.49039 0.0 0.29125 0.14659 0.0 1.1769 0.0 0.52177 0.0 0.0 0.0 0.02238 0.12622 0.0 0.0 0.06297 0.0178 0.67322 0.0 0.05285 1.23456 1.81514 0.38881 1.2643 0.65842 1.22869 0.13749 0.78912 0.36328 0.20051 0.20966 0.35139 0.90781 0.15151 0.15581 0.13215 0.41019 0.24813 0.36538 0.11006 0.08458 0.0 0.55327 0.29483 1.3651 0.33632 1.0897 0.29721 0.24256 0.4109 0.298 [...]
+Bacteria|Firmicutes|Clostridia|Clostridiales|Lachnospiraceae|Roseburia|Roseburia_intestinalis 0.0 0.17731 1.20614 0.0 0.0 0.33083 0.0 0.0 0.19663 0.0 5.14224 0.04233 0.0 0.0366 0.0 2.03435 0.0 0.0 0.0 0.0 0.00328 0.0 0.0 0.22414 0.11537 0.00068 0.0 0.43529 0.09658 0.28117 0.65361 0.01209 0.22676 0.13006 1.20361 0.26898 0.32906 4.70681 0.24821 0.07463 0.0111 0.0 0.00055 3.63876 1.24876 1.13958 0.0 1.98878 0.05952 1.05679 0.47504 0.02146 0.3486 4.70764 1.60877 0.25532 9.09332 0.37841 0.047 [...]
+Bacteria|Firmicutes|Clostridia|Clostridiales|Lachnospiraceae|Roseburia|Roseburia_inulinivorans 0.0 0.36669 0.17038 0.0 0.0 1.06442 0.0 0.0 0.22111 0.0 1.2247 0.02443 0.0 0.1881 0.0 2.09047 0.0 0.0 0.0 0.1673 2.25094 0.0 0.0 0.12036 1.56402 1.12341 0.0 0.2623 2.3495 0.33386 2.59085 0.11118 0.17521 0.77943 0.79815 1.24169 0.13012 2.19831 0.18116 0.67613 0.11792 0.06656 2.80512 3.10634 0.69828 0.00522 0.24487 3.68615 0.24233 1.21518 0.61702 1.04782 0.60436 1.14752 0.02576 0.03658 1.19644 0. [...]
+Bacteria|Firmicutes|Clostridia|Clostridiales|Lachnospiraceae|Roseburia|Roseburia_unclassified 0.0 0.6977 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.61171 0.0 0.0 0.0 1.79923 0.0 0.0 0.0 0.33454 0.0 0.0 0.0 0.24664 0.0 0.0 0.0 0.54787 0.0 0.0 0.0 0.0 0.0 0.03936 0.24537 0.0 1.02382 0.14915 0.90472 0.0 0.0 0.10146 0.0 0.0 2.14714 0.0 0.10177 0.0 0.76203 0.0 0.16077 0.0 0.0 0.0 0.0 0.36566 0.01198 0.0 0.0 0.0 1.23663 0.0 1.23446 0.52401 0.0 0.0 0.0 0.92846 0.0 0.247 0.0 0.0 1.90654 0.0 0.0 0.078 [...]
+Bacteria|Firmicutes|Clostridia|Clostridiales|Oscillospiraceae 0.0 1.28308 1.39021 0.0 0.0 0.21169 0.0 0.0 0.26101 0.0 1.05534 0.55487 0.0 0.20906 0.0 1.05944 0.0 0.0 0.0 0.27743 0.28318 0.0 0.0 0.15176 1.13567 0.57894 0.0 0.60811 0.28902 0.2022 0.11455 0.46436 0.0361 0.1531 0.35405 0.17256 0.15123 0.49951 1.93753 1.34257 0.21264 0.19973 0.15159 0.10335 0.6711 2.68236 0.2467 0.21422 0.20847 0.10624 0.29635 0.21337 0.09192 0.36879 1.07042 1.60861 0.81036 0.17777 0.25998 0.32799 0.82669 0.1 [...]
+Bacteria|Firmicutes|Clostridia|Clostridiales|Oscillospiraceae|Oscillibacter 0.0 1.28308 1.39021 0.0 0.0 0.21169 0.0 0.0 0.26101 0.0 1.05534 0.55487 0.0 0.20906 0.0 1.05944 0.0 0.0 0.0 0.27743 0.28318 0.0 0.0 0.15176 1.13567 0.57894 0.0 0.60811 0.28902 0.2022 0.11455 0.46436 0.0361 0.1531 0.35405 0.17256 0.15123 0.49951 1.93753 1.34257 0.21264 0.19973 0.15159 0.10335 0.6711 2.68236 0.2467 0.21422 0.20847 0.10624 0.29635 0.21337 0.09192 0.36879 1.07042 1.60861 0.81036 0.17777 0.25998 0.327 [...]
+Bacteria|Firmicutes|Clostridia|Clostridiales|Oscillospiraceae|Oscillibacter|Oscillibacter_sp_KLE_1728 0.0 0.7506 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.25641 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.59985 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.52613 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Firmicutes|Clostridia|Clostridiales|Oscillospiraceae|Oscillibacter|Oscillibacter_sp_KLE_1745 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.44762 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.40248 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.31672 0.0 0.58714 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.3051 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.42723 0.0 0.10461 0.0 0.0 0.0 0.0 [...]
+Bacteria|Firmicutes|Clostridia|Clostridiales|Oscillospiraceae|Oscillibacter|Oscillibacter_unclassified 0.0 0.53249 1.39021 0.0 0.0 0.21169 0.0 0.0 0.26101 0.0 1.05534 0.55471 0.0 0.20906 0.0 1.05944 0.0 0.0 0.0 0.27743 0.28318 0.0 0.0 0.15176 0.68805 0.57894 0.0 0.35169 0.28902 0.2022 0.11455 0.46436 0.0361 0.1531 0.35405 0.17256 0.15123 0.49951 1.53505 1.34257 0.21264 0.19973 0.15159 0.10335 0.6711 2.68236 0.2467 0.21422 0.20847 0.10624 0.29635 0.21337 0.09192 0.36879 0.75266 1.00876 0. [...]
+Bacteria|Firmicutes|Clostridia|Clostridiales|Oscillospiraceae|Oscillibacter|Oscillibacter_valericigenes 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00016 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00104 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Firmicutes|Clostridia|Clostridiales|Peptostreptococcaceae 0.0 0.0 0.02691 0.0 0.0 0.0 0.0 0.0 0.4849 0.0 0.0 0.08644 0.0 0.05241 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01715 0.0 0.06216 0.0 0.0 0.0 0.59935 0.03611 0.13838 0.0303 0.02849 0.17018 0.06229 0.21584 0.09947 0.013 0.0 0.09751 0.04589 0.0517 0.3378 0.02432 0.30172 0.0 0.0 0.01907 0.07512 0.13176 0.02243 0.03085 0.03337 0.04835 0.07132 0.0 0.09851 0.05447 0.14766 0.06457 0.04248 0.0012 0.23166 0.02085 0.00222 0.0128 0.063 [...]
+Bacteria|Firmicutes|Clostridia|Clostridiales|Peptostreptococcaceae|Peptostreptococcaceae_noname 0.0 0.0 0.02691 0.0 0.0 0.0 0.0 0.0 0.48173 0.0 0.0 0.08644 0.0 0.05241 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01715 0.0 0.06216 0.0 0.0 0.0 0.59935 0.03611 0.13838 0.0303 0.02849 0.17018 0.06229 0.21584 0.09947 0.013 0.0 0.09751 0.04589 0.0517 0.3378 0.02432 0.30172 0.0 0.0 0.01907 0.07512 0.13176 0.02243 0.03085 0.03337 0.04711 0.07132 0.0 0.09851 0.05447 0.1445 0.01694 0.04248 0.0 0.23166 0. [...]
+Bacteria|Firmicutes|Clostridia|Clostridiales|Peptostreptococcaceae|Peptostreptococcaceae_noname|Clostridium_bartlettii 0.0 0.0 0.02691 0.0 0.0 0.0 0.0 0.0 0.45884 0.0 0.0 0.04477 0.0 0.05241 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01705 0.0 0.0 0.0 0.0 0.0 0.20605 0.00377 0.13838 0.0 0.02849 0.15091 0.03307 0.21584 0.0 0.013 0.0 0.09751 0.04589 0.00163 0.08063 0.0 0.27341 0.0 0.0 0.01907 0.01511 0.02729 0.0 0.03085 0.0 0.02025 0.01259 0.0 0.0256 0.00528 0.1445 0.0 0.0 0.0 0.02647 0.0 0.0 0 [...]
+Bacteria|Firmicutes|Clostridia|Clostridiales|Peptostreptococcaceae|Peptostreptococcaceae_noname|Clostridium_difficile 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0. [...]
+Bacteria|Firmicutes|Clostridia|Clostridiales|Peptostreptococcaceae|Peptostreptococcaceae_noname|Clostridium_hiranonis 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0. [...]
+Bacteria|Firmicutes|Clostridia|Clostridiales|Peptostreptococcaceae|Peptostreptococcaceae_noname|Peptostreptococcaceae_noname_unclassified 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.02289 0.0 0.0 0.04166 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 9e-05 0.0 0.06216 0.0 0.0 0.0 0.39331 0.03234 0.0 0.0303 0.0 0.01927 0.02923 0.0 0.09947 0.0 0.0 0.0 0.0 0.05008 0.25717 0.02432 0.02832 0.0 0.0 0.0 0.06001 0.10448 0.02243 0.0 0.03337 0.02686 0.05874 0.0 0.07291 0.04919 0.0 0.01694 0.04248 0.0 0.20519 0 [...]
+Bacteria|Firmicutes|Clostridia|Clostridiales|Peptostreptococcaceae|Peptostreptococcus 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00317 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00124 0.0 0.0 0.0 0.0 0.00315 0.04763 0.0 0.0012 0.0 0.0 0.00222 0.0 0.0 0.0 0.0 0.0 0.00098 0.0 0.0 0.0 0.0 0.0 0.0 0.00101 0.0 0.00098 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Firmicutes|Clostridia|Clostridiales|Peptostreptococcaceae|Peptostreptococcus|Peptostreptococcus_stomatis 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.04715 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0. [...]
+Bacteria|Firmicutes|Clostridia|Clostridiales|Peptostreptococcaceae|Peptostreptococcus|Peptostreptococcus_unclassified 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00317 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00124 0.0 0.0 0.0 0.0 0.00315 0.00048 0.0 0.0012 0.0 0.0 0.00222 0.0 0.0 0.0 0.0 0.0 0.00098 0.0 0.0 0.0 0.0 0.0 0.0 0.00101 0.0 0.00098 0.0 0.0 0.0 0.0 [...]
+Bacteria|Firmicutes|Clostridia|Clostridiales|Ruminococcaceae 0.0 13.74718 33.30014 0.0 0.0 17.91512 0.0 0.0 27.37954 0.0 30.41537 31.81112 0.0 29.42773 0.0 16.8596 0.0 0.0 0.0 15.56366 19.73098 0.0 0.0 15.45052 21.15199 15.2235 0.0 13.17838 48.52497 23.24764 14.55358 24.3872 7.10707 18.01964 21.22666 17.26028 16.52454 15.91933 26.92967 15.95545 29.1735 28.36267 28.7864 18.12835 15.00947 10.54151 46.05746 14.06825 15.41244 13.13354 31.25984 37.89877 36.56638 14.06658 36.00391 9.10893 19.5 [...]
+Bacteria|Firmicutes|Clostridia|Clostridiales|Ruminococcaceae|Anaerotruncus 0.0 0.07746 0.33301 0.0 0.0 0.11364 0.0 0.0 0.50939 0.0 0.29059 1.83014 0.0 0.18324 0.0 0.34845 0.0 0.0 0.0 0.11831 0.28045 0.0 0.0 0.21638 0.33001 0.14441 0.0 0.09916 0.59901 0.54644 0.16202 0.467 0.07035 0.67369 0.52455 0.21792 0.31424 0.04883 1.29616 0.24332 0.33753 0.2118 0.07983 0.12161 0.11654 0.0 0.33671 0.0 0.31974 0.26261 0.05543 0.55665 0.28978 0.15973 0.27426 0.09941 0.12158 0.33429 0.60508 0.02455 0.17 [...]
+Bacteria|Firmicutes|Clostridia|Clostridiales|Ruminococcaceae|Anaerotruncus|Anaerotruncus_colihominis 0.0 0.0 0.00802 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.07874 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.09071 0.0 0.03479 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01109 0.0 0.0 0.0 0.02152 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00162 0.00096 0.0 0.0 0.0 0.0 0.0305 0.0 0.0 0.0 0.0 0.00154 0.00634 0.0 0.0 0.0 0.0 0.0 0.03308 0.0 0.0 0.0 0.0 0.0 0.00215 0.0 0.0 0.0 0.00187 0.0 [...]
+Bacteria|Firmicutes|Clostridia|Clostridiales|Ruminococcaceae|Anaerotruncus|Anaerotruncus_unclassified 0.0 0.07746 0.32499 0.0 0.0 0.11364 0.0 0.0 0.50939 0.0 0.29059 1.83014 0.0 0.18324 0.0 0.26972 0.0 0.0 0.0 0.11831 0.28045 0.0 0.0 0.21638 0.33001 0.05369 0.0 0.06437 0.59901 0.54644 0.16202 0.467 0.07035 0.67369 0.52455 0.21792 0.31424 0.04883 1.29616 0.23223 0.33753 0.2118 0.07983 0.1001 0.11654 0.0 0.33671 0.0 0.31974 0.26261 0.05543 0.55665 0.28978 0.15973 0.27263 0.09846 0.12158 0. [...]
+Bacteria|Firmicutes|Clostridia|Clostridiales|Ruminococcaceae|Faecalibacterium 0.0 2.49657 10.2089 0.0 0.0 5.81278 0.0 0.0 4.1344 0.0 13.35081 5.14989 0.0 7.37104 0.0 3.70775 0.0 0.0 0.0 5.6902 3.79863 0.0 0.0 3.4398 3.8575 6.35701 0.0 1.79129 10.65742 5.51278 8.39286 6.84808 4.48949 5.75731 6.27546 4.27973 3.68571 9.36259 5.96247 5.26281 3.89038 5.25056 13.59728 12.47578 7.72923 1.16109 5.01145 7.00407 7.15702 1.87734 5.00789 8.49813 6.87757 7.53253 7.04919 3.55184 7.16274 4.05277 16.623 [...]
+Bacteria|Firmicutes|Clostridia|Clostridiales|Ruminococcaceae|Faecalibacterium|Faecalibacterium_prausnitzii 0.0 2.49657 10.2089 0.0 0.0 5.81278 0.0 0.0 4.1344 0.0 13.35081 5.14989 0.0 7.37104 0.0 3.70775 0.0 0.0 0.0 5.6902 3.79863 0.0 0.0 3.4398 3.8575 6.35701 0.0 1.79129 10.65742 5.51278 8.39286 6.84808 4.48949 5.75731 6.27546 4.27973 3.68571 9.36259 5.96247 5.26281 3.89038 5.25056 13.59728 12.47578 7.72923 1.16109 5.01145 7.00407 7.15702 1.87734 5.00789 8.49813 6.87757 7.53253 7.04919 3 [...]
+Bacteria|Firmicutes|Clostridia|Clostridiales|Ruminococcaceae|Ruminococcaceae_noname 0.0 0.05369 0.00263 0.0 0.0 0.00613 0.0 0.0 0.00712 0.0 0.04791 0.0325 0.0 0.00852 0.0 0.09168 0.0 0.0 0.0 0.00615 0.0 0.0 0.0 0.00482 0.04399 0.00607 0.0 0.01129 0.0098 0.00584 0.00347 0.03856 0.00066 0.0004 0.00726 0.00579 0.00773 0.03511 0.05014 0.00986 0.00354 0.00238 0.00964 0.00595 0.08084 0.1169 0.00881 0.0 0.00581 0.00648 0.03503 0.00528 0.00504 0.02053 0.20462 0.01746 0.0136 0.00773 0.0212 0.0 0. [...]
+Bacteria|Firmicutes|Clostridia|Clostridiales|Ruminococcaceae|Ruminococcaceae_noname|Ruminococcaceae_bacterium_D16 0.0 0.05369 0.00263 0.0 0.0 0.00613 0.0 0.0 0.00712 0.0 0.04791 0.0325 0.0 0.00852 0.0 0.09168 0.0 0.0 0.0 0.00615 0.0 0.0 0.0 0.00482 0.04399 0.00607 0.0 0.01129 0.0098 0.00584 0.00347 0.03856 0.00066 0.0004 0.00726 0.00579 0.00773 0.03511 0.05014 0.00986 0.00354 0.00238 0.00964 0.00595 0.08084 0.1169 0.00881 0.0 0.00581 0.00648 0.03503 0.00528 0.00504 0.02053 0.20462 0.0174 [...]
+Bacteria|Firmicutes|Clostridia|Clostridiales|Ruminococcaceae|Ruminococcus 0.0 0.80326 6.02355 0.0 0.0 3.46585 0.0 0.0 0.70971 0.0 2.45116 7.28908 0.0 2.45828 0.0 4.14937 0.0 0.0 0.0 3.4284 3.85277 0.0 0.0 3.94816 2.7444 2.87443 0.0 1.8829 17.63335 3.87145 0.53939 4.17665 0.04493 4.7852 1.22085 2.2193 1.77431 0.88749 4.80839 3.66514 2.70546 4.02468 0.3407 2.36015 1.34 2.63399 6.94494 1.59306 1.80203 0.66681 4.21065 6.30891 1.09949 0.36385 1.07824 2.17753 1.33704 2.5091 0.57014 0.63571 25. [...]
+Bacteria|Firmicutes|Clostridia|Clostridiales|Ruminococcaceae|Ruminococcus|Ruminococcus_albus 0.0 0.0 0.0 0.0 0.0 0.00697 0.0 0.0 0.00577 0.0 0.08061 0.0 0.0 0.03012 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00324 0.0 0.00356 0.0 0.05349 0.02571 0.0 0.0 0.0 0.03222 0.01121 0.0 0.02996 0.00834 0.012 0.00321 0.00635 0.02828 0.19075 0.0 0.0 0.01597 0.0122 0.00361 0.0 0.0 0.0 0.0 0.00806 0.0 0.0 0.04946 0.0 0.01914 0.051 0.00782 0.02167 0.02368 0.00656 0.0 0.0 0.01416 0.03093 0.00574 0.03 [...]
+Bacteria|Firmicutes|Clostridia|Clostridiales|Ruminococcaceae|Ruminococcus|Ruminococcus_bromii 0.0 0.0 5.35446 0.0 0.0 2.45433 0.0 0.0 0.1562 0.0 2.0002 6.7138 0.0 2.20583 0.0 3.09761 0.0 0.0 0.0 1.59703 0.68752 0.0 0.0 2.3931 2.72779 0.63691 0.0 0.95348 17.60942 3.54453 0.21291 2.45078 0.01242 3.69455 0.11301 0.01478 1.39672 0.0 3.22644 2.11788 1.94882 3.05459 0.0261 0.055 0.02675 2.63399 3.82687 0.0 1.04473 0.02406 4.00461 5.67912 0.00525 0.0 0.05508 1.52745 0.04717 0.73502 0.01083 0.0 [...]
+Bacteria|Firmicutes|Clostridia|Clostridiales|Ruminococcaceae|Ruminococcus|Ruminococcus_callidus 0.0 0.0 0.00738 0.0 0.0 0.0 0.0 0.0 0.01207 0.0 0.04542 0.05086 0.0 0.01046 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00666 0.07164 0.0 0.00516 0.01919 0.02983 0.05142 0.16438 0.01062 0.02689 0.2016 0.0 0.0 0.00529 0.00594 0.02293 0.02851 0.0 0.08479 0.0 0.49931 0.0 0.33014 0.05066 0.011 0.01431 0.02612 0.02645 0.0019 0.0 0.0 0.21543 0.0 0.0348 0.0 0.00468 0.0 0.05283 0.45272 0.00295 0.01057 0 [...]
+Bacteria|Firmicutes|Clostridia|Clostridiales|Ruminococcaceae|Ruminococcus|Ruminococcus_champanellensis 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.53018 0.0 0.0 0.00308 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.04078 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.22186 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 2.04182 0.0 0.0 0.00608 0.0 0.0 0.0 0.0 0.34356 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 3.45886 0.0 0.0 0.0 0.0 0.0 0.31265 0.0 0.0563 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0. [...]
+Bacteria|Firmicutes|Clostridia|Clostridiales|Ruminococcaceae|Ruminococcus|Ruminococcus_flavefaciens 0.0 0.0 0.02159 0.0 0.0 0.00911 0.0 0.0 0.0055 0.0 0.02081 0.00027 0.0 0.0241 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00272 0.0 0.0 0.0 0.00217 0.00474 0.02174 0.01238 0.00419 0.00283 0.08001 0.00982 0.00506 0.05803 0.00797 0.01277 0.0071 0.00552 0.00632 0.00446 0.08172 0.0 0.0 0.00319 0.00457 0.01189 0.00663 0.0 0.04057 0.01293 0.0037 0.00463 0.0 0.01313 0.0 0.01746 0.00902 0.0 0.00933 0.00 [...]
+Bacteria|Firmicutes|Clostridia|Clostridiales|Ruminococcaceae|Ruminococcus|Ruminococcus_lactaris 0.0 0.0 0.64012 0.0 0.0 0.00023 0.0 0.0 0.0 0.0 0.30413 0.23807 0.0 0.0 0.0 1.05177 0.0 0.0 0.0 0.12963 2.15347 0.0 0.0 1.55234 0.00995 1.21974 0.0 0.91853 0.0 0.0 0.23698 0.91689 0.01907 0.5952 0.62586 1.72509 0.03962 0.37889 0.79199 0.91587 0.12631 0.15151 0.03963 1.24037 0.26989 0.0 0.72694 1.16969 0.43386 0.61572 0.17992 0.0 0.83467 0.12347 0.29745 0.14234 0.62954 0.52186 0.52273 0.57101 0 [...]
+Bacteria|Firmicutes|Clostridia|Clostridiales|Ruminococcaceae|Ruminococcus|Ruminococcus_sp_5_1_39BFAA 0.0 0.80326 0.0 0.0 0.0 0.99522 0.0 0.0 0.0 0.0 0.0 0.28301 0.0 0.18777 0.0 0.0 0.0 0.0 0.0 1.70174 0.971 0.0 0.0 0.0 0.0 0.94291 0.0 0.0 0.0 0.0 0.0 0.6404 0.0 0.38856 0.23835 0.46316 0.27993 0.46539 0.76291 0.58937 0.59309 0.80591 0.15745 0.7923 0.54405 0.0 0.0 0.35594 0.29694 0.0 0.0 0.56277 0.24475 0.22861 0.37751 0.29231 0.59774 1.21743 0.0 0.0 1.45483 0.0 0.0 0.38114 0.0 0.0 0.80085 [...]
+Bacteria|Firmicutes|Clostridia|Clostridiales|Ruminococcaceae|Subdoligranulum 0.0 10.31621 16.73205 0.0 0.0 8.51671 0.0 0.0 22.01892 0.0 14.2749 17.50951 0.0 19.40666 0.0 8.56235 0.0 0.0 0.0 6.3206 11.79912 0.0 0.0 7.84136 14.17609 5.84158 0.0 9.39375 19.62539 13.31113 5.45583 12.85692 2.50163 6.80304 13.19854 10.53754 10.74255 5.5853 14.81252 6.77432 22.23658 18.87325 14.75894 3.16486 5.74285 6.62953 33.75555 5.47112 6.12783 10.32029 21.95084 22.5298 28.2945 5.98995 27.39762 3.2627 10.88 [...]
+Bacteria|Firmicutes|Clostridia|Clostridiales|Ruminococcaceae|Subdoligranulum|Subdoligranulum_sp_4_3_54A2FAA 0.0 0.2419 0.28172 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.23219 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.22641 0.0 0.0 0.0 0.0 0.13179 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.52911 0.0 0.0 0.13794 0.0 0.0 0.0 0.0 0.37927 0.0 0.0 0.0 0.0 0.0 0.15472 0.0 0.0 0.23459 0.0 0.0 0.23816 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 [...]
+Bacteria|Firmicutes|Clostridia|Clostridiales|Ruminococcaceae|Subdoligranulum|Subdoligranulum_unclassified 0.0 10.06639 16.43751 0.0 0.0 8.50024 0.0 0.0 21.99083 0.0 14.22586 17.26803 0.0 19.39081 0.0 8.5213 0.0 0.0 0.0 6.3206 11.77675 0.0 0.0 7.82479 14.15421 5.81608 0.0 9.37999 19.60863 13.29789 5.44784 12.8317 2.49822 6.78928 13.18801 10.29177 10.7364 5.57227 14.7977 6.7596 22.09387 18.86824 14.70747 3.13578 5.72279 6.62571 33.75085 5.47112 6.11857 10.31111 21.94655 22.52518 27.75344 5 [...]
+Bacteria|Firmicutes|Clostridia|Clostridiales|Ruminococcaceae|Subdoligranulum|Subdoligranulum_variabile 0.0 0.00791 0.01282 0.0 0.0 0.01647 0.0 0.0 0.0281 0.0 0.04904 0.00929 0.0 0.01585 0.0 0.04105 0.0 0.0 0.0 0.0 0.02237 0.0 0.0 0.01657 0.02188 0.02549 0.0 0.01375 0.01675 0.01324 0.008 0.02521 0.00341 0.01376 0.01053 0.01936 0.00615 0.01303 0.01482 0.01472 0.01093 0.00501 0.05146 0.02909 0.02006 0.00382 0.00469 0.0 0.00926 0.00918 0.00428 0.00462 0.01194 0.00647 0.02311 0.02192 0.02225 [...]
+Bacteria|Firmicutes|Clostridia|Halanaerobiales 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.02458 0.01434 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01058 0.0 0.0 0.0 0.0 0.0176 0.0 0.0153 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00912 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Firmicutes|Clostridia|Halanaerobiales|Halobacteroidaceae 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.02458 0.01434 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01058 0.0 0.0 0.0 0.0 0.0176 0.0 0.0153 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00912 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Firmicutes|Clostridia|Halanaerobiales|Halobacteroidaceae|Halobacteroidaceae_unclassified 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.02458 0.01434 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01058 0.0 0.0 0.0 0.0 0.0176 0.0 0.0153 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00912 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Firmicutes|Erysipelotrichia 0.0 0.08432 0.02322 0.0 0.0 0.61263 0.0 0.0 0.89794 0.0 1.3301 0.99256 0.0 0.14834 0.0 0.11904 0.0 0.0 0.0 0.07222 0.03687 0.0 0.0 0.04748 0.72466 0.24872 0.0 0.18121 2.66382 0.75911 0.23039 0.06394 0.00925 0.01575 2.06623 0.04507 0.1142 1.10219 0.0526 1.46853 0.10805 0.02362 0.03508 0.12275 0.85657 1.5507 0.76936 0.01547 0.74128 1.26393 0.05699 3.3004 0.21245 0.60898 0.08701 0.383 0.06029 1.96883 1.35338 0.09254 0.18468 0.98634 0.01816 1.22238 0.0346 [...]
+Bacteria|Firmicutes|Erysipelotrichia|Erysipelotrichales 0.0 0.08432 0.02322 0.0 0.0 0.61263 0.0 0.0 0.89794 0.0 1.3301 0.99256 0.0 0.14834 0.0 0.11904 0.0 0.0 0.0 0.07222 0.03687 0.0 0.0 0.04748 0.72466 0.24872 0.0 0.18121 2.66382 0.75911 0.23039 0.06394 0.00925 0.01575 2.06623 0.04507 0.1142 1.10219 0.0526 1.46853 0.10805 0.02362 0.03508 0.12275 0.85657 1.5507 0.76936 0.01547 0.74128 1.26393 0.05699 3.3004 0.21245 0.60898 0.08701 0.383 0.06029 1.96883 1.35338 0.09254 0.18468 0.98634 0.0 [...]
+Bacteria|Firmicutes|Erysipelotrichia|Erysipelotrichales|Erysipelotrichaceae 0.0 0.08432 0.02322 0.0 0.0 0.61263 0.0 0.0 0.89794 0.0 1.3301 0.99256 0.0 0.14834 0.0 0.11904 0.0 0.0 0.0 0.07222 0.03687 0.0 0.0 0.04748 0.72466 0.24872 0.0 0.18121 2.66382 0.75911 0.23039 0.06394 0.00925 0.01575 2.06623 0.04507 0.1142 1.10219 0.0526 1.46853 0.10805 0.02362 0.03508 0.12275 0.85657 1.5507 0.76936 0.01547 0.74128 1.26393 0.05699 3.3004 0.21245 0.60898 0.08701 0.383 0.06029 1.96883 1.35338 0.09254 [...]
+Bacteria|Firmicutes|Erysipelotrichia|Erysipelotrichales|Erysipelotrichaceae|Catenibacterium 0.0 0.0 0.0 0.0 0.0 0.25457 0.0 0.0 0.64347 0.0 0.31012 0.65408 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 1.65633 0.17283 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.52079 0.0 0.0 0.0 0.0 0.0 0.0 1.87679 0.0 0.0 0.0 0.32578 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.35401 0.0 0.0 0.0 1.19654 1.2124 0.0 0.0 0.0 0.00774 4.034 [...]
+Bacteria|Firmicutes|Erysipelotrichia|Erysipelotrichales|Erysipelotrichaceae|Catenibacterium|Catenibacterium_mitsuokai 0.0 0.0 0.0 0.0 0.0 0.25457 0.0 0.0 0.64347 0.0 0.31012 0.65408 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 1.65633 0.17283 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.52079 0.0 0.0 0.0 0.0 0.0 0.0 1.87679 0.0 0.0 0.0 0.32578 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.35401 0.0 0.0 0.0 1.19654 1.2124 [...]
+Bacteria|Firmicutes|Erysipelotrichia|Erysipelotrichales|Erysipelotrichaceae|Coprobacillus 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00215 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00268 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.71788 0.006 0.0 0.0 0.0 0.0 0.0 0.15881 0.0 0.00205 0.0 0.0 0.0 0.0 0.00122 0.0022 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.07283 0.0 0.0 0.00123 0.0 0.0 0.03494 0.0 0.0 0.0 0.0 0.0 0.0051 0.0 0.0 0.0 0.0 0. [...]
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+Bacteria|Firmicutes|Negativicutes|Selenomonadales|Veillonellaceae|Megamonas 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 2.74673 0.0 0.0 0.0 0.02724 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 2.26412 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Firmicutes|Negativicutes|Selenomonadales|Veillonellaceae|Megamonas|Megamonas_funiformis 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.49714 0.0 0.0 0.0 0.00316 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Firmicutes|Negativicutes|Selenomonadales|Veillonellaceae|Megamonas|Megamonas_hypermegale 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.40421 0.0 0.0 0.0 0.00406 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0841 [...]
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+Bacteria|Firmicutes|Negativicutes|Selenomonadales|Veillonellaceae|Megasphaera|Megasphaera_unclassified 0.0 0.0 0.01203 0.0 0.0 0.0 0.0 0.0 0.03554 0.0 0.0 1.15844 0.0 0.0 0.0 0.0166 0.0 0.0 0.0 0.02276 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.15485 0.10022 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.02679 0.01818 0.0 0.0 0.0 0.0 0.0 0.0 0.05567 0.0 0.0 0.02322 0.92895 0.66788 0.0 0.0 0.01542 0.02319 0.0 0.0 0.0 0.01542 0.0 0.02828 0.02837 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0161 [...]
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+Bacteria|Firmicutes|Negativicutes|Selenomonadales|Veillonellaceae|Mitsuokella|Mitsuokella_multacida 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 1.39792 0.0 0.0 1.64027 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.30674 0.54488 1.99156 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00043 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.06215 0.74281 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.26835 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Firmicutes|Negativicutes|Selenomonadales|Veillonellaceae|Mitsuokella|Mitsuokella_unclassified 0.0 0.01303 0.02745 0.0 0.0 0.06276 0.0 0.0 0.22276 0.0 0.15974 0.47537 0.0 0.1782 0.0 0.04143 0.0 0.0 0.0 0.04735 0.0 0.0 0.0 0.04379 0.10202 0.03175 0.0 0.0623 1.10495 0.23442 0.24054 0.0872 0.02322 0.25144 0.28253 0.09546 0.27064 0.11856 0.09173 0.0177 0.16814 0.26108 0.07923 0.09082 0.03727 0.01927 0.21468 0.01745 0.07863 0.02558 0.27438 1.47979 0.06906 0.07671 0.08823 0.03643 0.074 [...]
+Bacteria|Firmicutes|Negativicutes|Selenomonadales|Veillonellaceae|Veillonella 0.0 0.0 0.60892 0.0 0.0 0.00896 0.0 0.0 0.04738 0.0 0.01619 0.04644 0.0 0.04893 0.0 0.00903 0.0 0.0 0.0 0.02214 0.01148 0.0 0.0 0.02633 0.00326 0.01189 0.0 0.0 0.05662 0.00538 0.05754 0.08178 0.02465 0.30707 0.0 0.15864 0.09073 0.00375 0.29009 0.0243 0.04287 0.06317 0.03448 0.00682 0.00689 0.19949 0.00056 0.00128 0.00467 0.04549 0.00252 0.12507 0.00592 0.05149 0.00504 0.0 0.01168 0.03965 0.12889 0.17278 0.00069 [...]
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+Bacteria|Firmicutes|Negativicutes|Selenomonadales|Veillonellaceae|Veillonella|Veillonella_dispar 0.0 0.0 0.03929 0.0 0.0 0.00016 0.0 0.0 0.0 0.0 0.0 0.00123 0.0 0.00055 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00352 0.00261 0.0 0.00706 0.0 0.01334 0.00514 0.0 0.01509 0.0 0.0 0.0 0.0 0.0 0.0 0.01276 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0046 0.0 0.0 0.00036 0.00468 0.0 0.0 0.00317 0.0 0.00728 0.0022 0.05685 0.08486 0.00104 0.0 0.0 0.02821 0.04224 0 [...]
+Bacteria|Firmicutes|Negativicutes|Selenomonadales|Veillonellaceae|Veillonella|Veillonella_parvula 0.0 0.0 0.05501 0.0 0.0 0.00056 0.0 0.0 0.01687 0.0 0.0 0.01984 0.0 0.00775 0.0 0.0 0.0 0.0 0.0 0.00365 0.0 0.0 0.0 0.01093 0.0 0.0 0.0 0.0 0.00534 0.0 0.03221 0.0354 0.01108 0.0297 0.0 0.05405 0.0362 0.0 0.07731 0.00257 0.01374 0.01571 0.01858 0.00191 0.0 0.0246 0.0 0.0 0.0 0.02213 0.0 0.06764 0.0 0.0242 0.0 0.0 0.0 0.01635 0.08293 0.04814 0.0 0.0 0.0 0.04865 0.0 0.0 0.04884 0.0 0.01851 0.0 [...]
+Bacteria|Firmicutes|Negativicutes|Selenomonadales|Veillonellaceae|Veillonella|Veillonella_ratti 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
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+Bacteria|Fusobacteria 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0027 0.31153 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00746 0.01504 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00371 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00026 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00266 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0002 0.02 [...]
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+Bacteria|Fusobacteria|Fusobacteriia|Fusobacteriales 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0027 0.31153 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00746 0.01504 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00371 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00026 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00266 0.0 0.0 0.0 0.0 0.0 0 [...]
+Bacteria|Fusobacteria|Fusobacteriia|Fusobacteriales|Fusobacteriaceae 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0027 0.31153 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01504 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00026 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00266 0.0 0.0 0.0 [...]
+Bacteria|Fusobacteria|Fusobacteriia|Fusobacteriales|Fusobacteriaceae|Fusobacterium 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0027 0.31153 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01504 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00026 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0026 [...]
+Bacteria|Fusobacteria|Fusobacteriia|Fusobacteriales|Fusobacteriaceae|Fusobacterium|Fusobacterium_gonidiaformans 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.28417 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Fusobacteria|Fusobacteriia|Fusobacteriales|Fusobacteriaceae|Fusobacterium|Fusobacterium_mortiferum 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00026 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Fusobacteria|Fusobacteriia|Fusobacteriales|Fusobacteriaceae|Fusobacterium|Fusobacterium_necrophorum 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Fusobacteria|Fusobacteriia|Fusobacteriales|Fusobacteriaceae|Fusobacterium|Fusobacterium_nucleatum 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0027 0.02737 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00576 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0. [...]
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+Bacteria|Fusobacteria|Fusobacteriia|Fusobacteriales|Leptotrichiaceae|Leptotrichiaceae_unclassified 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00746 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00371 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 [...]
+Bacteria|Fusobacteria|Fusobacteriia|Fusobacteriales|Leptotrichiaceae|Leptotrichia|Leptotrichia_unclassified 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Fusobacteria|Fusobacteriia|Fusobacteriales|Leptotrichiaceae|Leptotrichia|Leptotrichia_wadei 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Proteobacteria 0.0 0.99034 1.25341 0.0 0.0 0.83829 0.0 0.0 2.149 0.0 1.39152 2.56312 0.0 26.00606 0.0 0.82217 0.0 0.0 0.0 1.99349 3.03383 0.0 0.0 0.04473 12.10846 0.60057 0.0 2.90911 0.96773 0.66025 0.68348 1.20753 0.74099 0.78728 0.25837 1.69986 1.08189 2.2812 0.08211 2.57479 0.6778 0.99662 0.29693 1.54466 2.72054 0.64796 0.94903 3.6814 0.71823 1.26499 3.2255 0.61892 3.84499 2.32234 2.30724 2.8745 3.915 2.3106 1.05907 1.32945 3.45018 0.44998 1.41082 1.13336 1.22912 2.79449 1.72 [...]
+Bacteria|Proteobacteria|Alphaproteobacteria 0.0 0.0 0.0 0.0 0.0 0.00669 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.03217 0.0 0.0 0.0 0.0282 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00395 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01207 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01085 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01715 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 [...]
+Bacteria|Proteobacteria|Alphaproteobacteria|Caulobacterales 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00395 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01207 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Proteobacteria|Alphaproteobacteria|Caulobacterales|Caulobacteraceae 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00395 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01207 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Proteobacteria|Alphaproteobacteria|Caulobacterales|Caulobacteraceae|Asticcacaulis 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01207 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 [...]
+Bacteria|Proteobacteria|Alphaproteobacteria|Caulobacterales|Caulobacteraceae|Asticcacaulis|Asticcacaulis_unclassified 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01207 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0. [...]
+Bacteria|Proteobacteria|Alphaproteobacteria|Caulobacterales|Caulobacteraceae|Caulobacter 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00395 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Proteobacteria|Alphaproteobacteria|Caulobacterales|Caulobacteraceae|Caulobacter|Caulobacter_unclassified 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00395 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0. [...]
+Bacteria|Proteobacteria|Alphaproteobacteria|Rhizobiales 0.0 0.0 0.0 0.0 0.0 0.00669 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.03217 0.0 0.0 0.0 0.0282 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01085 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01715 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 [...]
+Bacteria|Proteobacteria|Alphaproteobacteria|Rhizobiales|Bartonellaceae 0.0 0.0 0.0 0.0 0.0 0.00669 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.03217 0.0 0.0 0.0 0.0282 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01085 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01715 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0. [...]
+Bacteria|Proteobacteria|Alphaproteobacteria|Rhizobiales|Bartonellaceae|Bartonella 0.0 0.0 0.0 0.0 0.0 0.00669 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.03217 0.0 0.0 0.0 0.0282 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01085 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01715 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Proteobacteria|Alphaproteobacteria|Rhizobiales|Bartonellaceae|Bartonella|Bartonella_unclassified 0.0 0.0 0.0 0.0 0.0 0.00669 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.03217 0.0 0.0 0.0 0.0282 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01085 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01715 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Proteobacteria|Alphaproteobacteria|Rhizobiales|Bradyrhizobiaceae 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0. [...]
+Bacteria|Proteobacteria|Alphaproteobacteria|Rhizobiales|Bradyrhizobiaceae|Afipia 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Proteobacteria|Alphaproteobacteria|Rhizobiales|Bradyrhizobiaceae|Afipia|Afipia_broomeae 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Proteobacteria|Alphaproteobacteria|Rhizobiales|Bradyrhizobiaceae|Afipia|Afipia_unclassified 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Proteobacteria|Alphaproteobacteria|Rhizobiales|Bradyrhizobiaceae|Rhodopseudomonas 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 [...]
+Bacteria|Proteobacteria|Alphaproteobacteria|Rhizobiales|Bradyrhizobiaceae|Rhodopseudomonas|Rhodopseudomonas_palustris 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0. [...]
+Bacteria|Proteobacteria|Alphaproteobacteria|Sphingomonadales 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Proteobacteria|Alphaproteobacteria|Sphingomonadales|Sphingomonadaceae 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 [...]
+Bacteria|Proteobacteria|Alphaproteobacteria|Sphingomonadales|Sphingomonadaceae|Sphingomonas 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Proteobacteria|Alphaproteobacteria|Sphingomonadales|Sphingomonadaceae|Sphingomonas|Sphingomonas_echinoides 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Proteobacteria|Betaproteobacteria 0.0 0.3675 0.13232 0.0 0.0 0.28559 0.0 0.0 0.3565 0.0 0.2128 0.85622 0.0 0.27715 0.0 0.39387 0.0 0.0 0.0 0.7628 2.64597 0.0 0.0 0.01129 0.38708 0.44797 0.0 0.33606 0.5245 0.37937 0.58841 0.05738 0.62573 0.09558 0.03257 1.32043 0.66659 2.05262 0.0418 1.47857 0.35577 0.44051 0.07233 0.93674 1.43915 0.1774 0.11845 3.46219 0.51015 0.9797 1.81607 0.35096 2.83365 1.93544 0.33418 2.23317 3.24215 1.85017 0.80205 0.0 2.66587 0.38641 1.14551 1.08966 0.600 [...]
+Bacteria|Proteobacteria|Betaproteobacteria|Burkholderiales 0.0 0.3675 0.13232 0.0 0.0 0.28559 0.0 0.0 0.3565 0.0 0.2128 0.85622 0.0 0.27715 0.0 0.39387 0.0 0.0 0.0 0.7628 2.64597 0.0 0.0 0.01129 0.38708 0.44797 0.0 0.3189 0.5245 0.37937 0.58841 0.05738 0.44731 0.09558 0.03257 1.32043 0.6506 2.05262 0.0418 1.47857 0.35577 0.44051 0.07233 0.93674 1.35102 0.1774 0.11845 3.46219 0.51015 0.9797 1.81607 0.35096 2.83365 1.84476 0.30573 2.23317 3.24215 1.85017 0.80205 0.0 2.66587 0.38641 1.12925 [...]
+Bacteria|Proteobacteria|Betaproteobacteria|Burkholderiales|Alcaligenaceae 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00665 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00796 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0. [...]
+Bacteria|Proteobacteria|Betaproteobacteria|Burkholderiales|Alcaligenaceae|Bordetella 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00665 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00796 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Proteobacteria|Betaproteobacteria|Burkholderiales|Alcaligenaceae|Bordetella|Bordetella_unclassified 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00665 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00796 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Proteobacteria|Betaproteobacteria|Burkholderiales|Burkholderiaceae 0.0 0.0 0.00879 0.0 0.0 0.00674 0.0 0.0 0.0173 0.0 0.0 0.0 0.0 0.0 0.0 0.0169 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00911 0.0 0.0 0.03801 0.07381 0.0 0.0 0.03233 0.0 0.0 0.0 0.0 0.0 0.03453 0.0 0.0 0.0 0.0 0.0 0.0 0.02533 0.0 0.0 0.0 0.0431 0.0 0.0 0.0 0.0 0.01738 0.0 0.01857 0.0 0.0 0.0 0.0 0.0 0.06636 0.0 0.0 0.0 0.0 0.0 0.0 0.0297 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.03902 0.03922 0.0 0.02169 0.0 0.0 0.0 0.0 [...]
+Bacteria|Proteobacteria|Betaproteobacteria|Burkholderiales|Burkholderiaceae|Burkholderia 0.0 0.0 0.0 0.0 0.0 0.00674 0.0 0.0 0.0173 0.0 0.0 0.0 0.0 0.0 0.0 0.0169 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.03176 0.07381 0.0 0.0 0.03233 0.0 0.0 0.0 0.0 0.0 0.03453 0.0 0.0 0.0 0.0 0.0 0.0 0.02533 0.0 0.0 0.0 0.03563 0.0 0.0 0.0 0.0 0.01738 0.0 0.01857 0.0 0.0 0.0 0.0 0.0 0.06636 0.0 0.0 0.0 0.0 0.0 0.0 0.0297 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.03902 0.03922 0.0 0.02169 0.0 0.0 0. [...]
+Bacteria|Proteobacteria|Betaproteobacteria|Burkholderiales|Burkholderiaceae|Burkholderia|Burkholderia_unclassified 0.0 0.0 0.0 0.0 0.0 0.00674 0.0 0.0 0.0173 0.0 0.0 0.0 0.0 0.0 0.0 0.0169 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.03176 0.07381 0.0 0.0 0.03233 0.0 0.0 0.0 0.0 0.0 0.03453 0.0 0.0 0.0 0.0 0.0 0.0 0.02533 0.0 0.0 0.0 0.03563 0.0 0.0 0.0 0.0 0.01738 0.0 0.01857 0.0 0.0 0.0 0.0 0.0 0.06636 0.0 0.0 0.0 0.0 0.0 0.0 0.0297 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.03902 0.03 [...]
+Bacteria|Proteobacteria|Betaproteobacteria|Burkholderiales|Burkholderiaceae|Cupriavidus 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00911 0.0 0.0 0.00626 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00746 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Proteobacteria|Betaproteobacteria|Burkholderiales|Burkholderiaceae|Cupriavidus|Cupriavidus_unclassified 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00911 0.0 0.0 0.00626 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00746 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Proteobacteria|Betaproteobacteria|Burkholderiales|Burkholderiaceae|Lautropia 0.0 0.0 0.00879 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0. [...]
+Bacteria|Proteobacteria|Betaproteobacteria|Burkholderiales|Burkholderiaceae|Lautropia|Lautropia_mirabilis 0.0 0.0 0.00879 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0. [...]
+Bacteria|Proteobacteria|Betaproteobacteria|Burkholderiales|Burkholderiales_noname 0.0 0.0 0.00755 0.0 0.0 0.0 0.0 0.0 0.01301 0.0 0.0 0.0023 0.0 0.16166 0.0 0.08334 0.0 0.0 0.0 0.69055 0.0 0.0 0.0 0.0 0.00222 0.0 0.0 0.0 0.0 0.0 0.00302 0.00227 0.0 0.0283 0.01263 0.56302 0.518 0.00882 0.0 0.0 0.20374 0.3069 0.05077 0.0924 0.00186 0.0 0.01625 0.00193 0.0 0.02315 0.10356 0.0 0.02091 0.0 0.00617 0.0 0.0 0.01923 0.0 0.0 0.04701 0.0 0.00333 0.11415 0.42812 0.0 0.0 0.26465 0.01735 0.19946 0.14 [...]
+Bacteria|Proteobacteria|Betaproteobacteria|Burkholderiales|Burkholderiales_noname|Burkholderiales_noname 0.0 0.0 0.00755 0.0 0.0 0.0 0.0 0.0 0.01301 0.0 0.0 0.0023 0.0 0.16166 0.0 0.08334 0.0 0.0 0.0 0.69055 0.0 0.0 0.0 0.0 0.00222 0.0 0.0 0.0 0.0 0.0 0.00302 0.00227 0.0 0.0283 0.01263 0.56302 0.518 0.00882 0.0 0.0 0.20374 0.3069 0.05077 0.0924 0.00186 0.0 0.01625 0.00193 0.0 0.02315 0.10356 0.0 0.02091 0.0 0.00617 0.0 0.0 0.01923 0.0 0.0 0.04701 0.0 0.00333 0.11415 0.42812 0.0 0.0 0.264 [...]
+Bacteria|Proteobacteria|Betaproteobacteria|Burkholderiales|Burkholderiales_noname|Burkholderiales_noname|Burkholderiales_bacterium_1_1_47 0.0 0.0 0.00755 0.0 0.0 0.0 0.0 0.0 0.01301 0.0 0.0 0.0023 0.0 0.16166 0.0 0.08334 0.0 0.0 0.0 0.69055 0.0 0.0 0.0 0.0 0.00222 0.0 0.0 0.0 0.0 0.0 0.00302 0.00227 0.0 0.0283 0.01263 0.56302 0.518 0.00882 0.0 0.0 0.20374 0.3069 0.05077 0.0924 0.00186 0.0 0.01625 0.00193 0.0 0.02315 0.10356 0.0 0.02091 0.0 0.00617 0.0 0.0 0.01923 0.0 0.0 0.04701 0.0 0.00 [...]
+Bacteria|Proteobacteria|Betaproteobacteria|Burkholderiales|Burkholderiales_noname|Thiomonas 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Proteobacteria|Betaproteobacteria|Burkholderiales|Burkholderiales_noname|Thiomonas|Thiomonas_unclassified 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 [...]
+Bacteria|Proteobacteria|Betaproteobacteria|Burkholderiales|Comamonadaceae 0.0 0.00384 0.00405 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00489 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00669 0.0 0.0 0.01837 0.0 0.0 0.0 0.0 0.0 0.00549 0.0 0.0 0.0 0.00499 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01136 0.0 0.0 0.01031 0.0 0.0 0.0 0.0 0.0 0.00946 0.01074 0.0 0.00495 0.0 0.0 0.0 0.0064 0.0 0.0 0.0 0.00456 0.0 0.0 0.00429 0.00576 0.0 0.0 0.0 0.0 0.00985 0.0 0.0 0.0 0.0 0.00564 0.00756 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Proteobacteria|Betaproteobacteria|Burkholderiales|Comamonadaceae|Comamonas 0.0 0.00384 0.00405 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00489 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00669 0.0 0.0 0.01837 0.0 0.0 0.0 0.0 0.0 0.00549 0.0 0.0 0.0 0.00499 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01136 0.0 0.0 0.01031 0.0 0.0 0.0 0.0 0.0 0.00946 0.01074 0.0 0.00495 0.0 0.0 0.0 0.0064 0.0 0.0 0.0 0.00456 0.0 0.0 0.00429 0.00576 0.0 0.0 0.0 0.0 0.00985 0.0 0.0 0.0 0.0 0.00564 0.00756 0.0 0.0 0 [...]
+Bacteria|Proteobacteria|Betaproteobacteria|Burkholderiales|Comamonadaceae|Comamonas|Comamonas_unclassified 0.0 0.00384 0.00405 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00489 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00669 0.0 0.0 0.01837 0.0 0.0 0.0 0.0 0.0 0.00549 0.0 0.0 0.0 0.00499 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01136 0.0 0.0 0.01031 0.0 0.0 0.0 0.0 0.0 0.00946 0.01074 0.0 0.00495 0.0 0.0 0.0 0.0064 0.0 0.0 0.0 0.00456 0.0 0.0 0.00429 0.00576 0.0 0.0 0.0 0.0 0.00985 0.0 0.0 0.0 0.0 0. [...]
+Bacteria|Proteobacteria|Betaproteobacteria|Burkholderiales|Comamonadaceae|Polaromonas 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0. [...]
+Bacteria|Proteobacteria|Betaproteobacteria|Burkholderiales|Comamonadaceae|Polaromonas|Polaromonas_unclassified 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 [...]
+Bacteria|Proteobacteria|Betaproteobacteria|Burkholderiales|Oxalobacteraceae 0.0 0.08417 0.0 0.0 0.0 0.0 0.0 0.0 0.08302 0.0 0.03015 0.05624 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00039 0.042 0.0 0.0 0.00178 0.02027 0.03879 0.00353 0.0 0.00312 0.0 0.0 0.0 0.0 0.0 0.0 0.04951 0.05165 0.02305 0.0 0.0 0.0 0.0 0.06029 0.0 0.21568 0.0 0.0 0.02281 0.0 0.02701 0.00788 0.0 0.0109 0.00743 0.26888 0.0 0.04399 0.03914 0.00094 0.05107 0.0 0.0 0.0 0.0 0.0429 0.02652 0.0 0.0 0.0 0.06211 0.06181 [...]
+Bacteria|Proteobacteria|Betaproteobacteria|Burkholderiales|Oxalobacteraceae|Candidatus_Zinderia 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00103 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00039 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00312 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00051 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00026 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Proteobacteria|Betaproteobacteria|Burkholderiales|Oxalobacteraceae|Candidatus_Zinderia|Candidatus_Zinderia_insecticola 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00103 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00039 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00312 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00051 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00026 0.0 [...]
+Bacteria|Proteobacteria|Betaproteobacteria|Burkholderiales|Oxalobacteraceae|Oxalobacter 0.0 0.08417 0.0 0.0 0.0 0.0 0.0 0.0 0.08302 0.0 0.03015 0.05522 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.042 0.0 0.0 0.00178 0.02027 0.03879 0.00353 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.04951 0.05165 0.02305 0.0 0.0 0.0 0.0 0.06029 0.0 0.21568 0.0 0.0 0.02281 0.0 0.02701 0.00788 0.0 0.0109 0.00743 0.26888 0.0 0.04399 0.03914 0.00094 0.05056 0.0 0.0 0.0 0.0 0.0429 0.02652 0.0 0.0 0.0 0.06211 0.06 [...]
+Bacteria|Proteobacteria|Betaproteobacteria|Burkholderiales|Oxalobacteraceae|Oxalobacter|Oxalobacter_formigenes 0.0 0.08417 0.0 0.0 0.0 0.0 0.0 0.0 0.08302 0.0 0.03015 0.05522 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.042 0.0 0.0 0.00178 0.02027 0.03879 0.00353 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.04951 0.05165 0.02305 0.0 0.0 0.0 0.0 0.06029 0.0 0.21568 0.0 0.0 0.02281 0.0 0.02701 0.00788 0.0 0.0109 0.00743 0.26888 0.0 0.04399 0.03914 0.00094 0.05056 0.0 0.0 0.0 0.0 0.0429 0.02652 0 [...]
+Bacteria|Proteobacteria|Betaproteobacteria|Burkholderiales|Sutterellaceae 0.0 0.27948 0.11193 0.0 0.0 0.27885 0.0 0.0 0.24318 0.0 0.18265 0.79768 0.0 0.1155 0.0 0.28874 0.0 0.0 0.0 0.07225 2.64597 0.0 0.0 0.0109 0.32707 0.44797 0.0 0.26074 0.43042 0.34058 0.58186 0.02278 0.44419 0.06179 0.01994 0.75741 0.1326 2.00426 0.0418 1.42905 0.10037 0.11056 0.02156 0.84435 1.32383 0.16603 0.04191 3.46026 0.24107 0.95654 1.7125 0.32814 2.81274 1.79373 0.28222 2.20385 3.23125 1.81856 0.53316 0.0 2.5 [...]
+Bacteria|Proteobacteria|Betaproteobacteria|Burkholderiales|Sutterellaceae|Parasutterella 0.0 0.00073 0.0636 0.0 0.0 0.0 0.0 0.0 0.00571 0.0 0.00174 0.01367 0.0 0.1155 0.0 0.07115 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00971 0.0 0.0 0.0 0.0 0.00159 0.00309 0.0 0.00348 0.02296 0.00118 0.75741 0.1326 0.00649 0.0 0.0 0.07173 0.11056 0.02156 0.84435 0.01206 0.0 0.02447 0.02538 0.05045 0.01241 0.09975 0.0 0.01897 0.01269 0.00312 0.00811 0.00303 0.01306 0.0 0.0 0.09091 0.0 0.02291 0.22347 0.17214 0. [...]
+Bacteria|Proteobacteria|Betaproteobacteria|Burkholderiales|Sutterellaceae|Parasutterella|Parasutterella_excrementihominis 0.0 0.00073 0.0636 0.0 0.0 0.0 0.0 0.0 0.00571 0.0 0.00174 0.01367 0.0 0.1155 0.0 0.07115 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00971 0.0 0.0 0.0 0.0 0.00159 0.00309 0.0 0.00348 0.02296 0.00118 0.75741 0.1326 0.00649 0.0 0.0 0.07173 0.11056 0.02156 0.84435 0.01206 0.0 0.02447 0.02538 0.05045 0.01241 0.09975 0.0 0.01897 0.01269 0.00312 0.00811 0.00303 0.01306 0.0 0.0 0.090 [...]
+Bacteria|Proteobacteria|Betaproteobacteria|Burkholderiales|Sutterellaceae|Sutterella 0.0 0.0 0.0 0.0 0.0 0.00011 0.0 0.0 0.05733 0.0 0.0 0.60781 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 2.64597 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.09803 0.0 0.57877 0.0 0.44071 0.0 0.0 0.0 0.0 1.99778 0.0 1.42905 0.02865 0.0 0.0 0.0 1.31177 0.0 0.0 3.43488 0.06568 0.94414 1.61275 0.06362 2.79378 1.78104 0.2791 2.19574 3.22821 1.8055 0.00045 0.0 2.48396 0.08775 1.10207 0.68189 0.0 2.47452 0.0 0.0 0.82709 0.0 0.0 2.15854 0 [...]
+Bacteria|Proteobacteria|Betaproteobacteria|Burkholderiales|Sutterellaceae|Sutterellaceae_unclassified 0.0 0.27875 0.04833 0.0 0.0 0.27875 0.0 0.0 0.18013 0.0 0.18091 0.1762 0.0 0.0 0.0 0.21759 0.0 0.0 0.0 0.07225 0.0 0.0 0.0 0.0109 0.31736 0.44797 0.0 0.26074 0.33239 0.33899 0.0 0.02278 0.0 0.03884 0.01876 0.0 0.0 0.0 0.0418 0.0 0.0 0.0 0.0 0.0 0.0 0.16603 0.01744 0.0 0.12494 0.0 0.0 0.26452 0.0 0.0 0.0 0.0 0.0 0.0 0.53271 0.0 0.0 0.18676 0.0 0.0 0.0 0.0 0.43924 0.0 0.1525 0.0 0.01427 0. [...]
+Bacteria|Proteobacteria|Betaproteobacteria|Burkholderiales|Sutterellaceae|Sutterella|Sutterella_wadsworthensis 0.0 0.0 0.0 0.0 0.0 0.00011 0.0 0.0 0.05733 0.0 0.0 0.60781 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 2.64597 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.09803 0.0 0.57877 0.0 0.44071 0.0 0.0 0.0 0.0 1.99778 0.0 1.42905 0.02865 0.0 0.0 0.0 1.31177 0.0 0.0 3.43488 0.06568 0.94414 1.61275 0.06362 2.79378 1.78104 0.2791 2.19574 3.22821 1.8055 0.00045 0.0 2.48396 0.08775 1.10207 0.68189 0.0 2.47452 0.0 0.0 [...]
+Bacteria|Proteobacteria|Betaproteobacteria|Gallionellales 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.17842 0.0 0.0 0.0 0.016 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.08813 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.09068 0.02845 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01908 0.0 0.0 0.0 0.0 0.01291 0.0 0.0 0.08546 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01137 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Proteobacteria|Betaproteobacteria|Gallionellales|Gallionellaceae 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.17842 0.0 0.0 0.0 0.016 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.08813 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.09068 0.02845 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01908 0.0 0.0 0.0 0.0 0.01291 0.0 0.0 0.08546 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01137 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Proteobacteria|Betaproteobacteria|Gallionellales|Gallionellaceae|Gallionellaceae_unclassified 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.17842 0.0 0.0 0.0 0.016 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.08813 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.09068 0.02845 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01908 0.0 0.0 0.0 0.0 0.01291 0.0 0.0 0.08546 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01137 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Proteobacteria|Betaproteobacteria|Neisseriales 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01716 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01626 0.0 0.0 0.0 0.02883 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0135 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 [...]
+Bacteria|Proteobacteria|Betaproteobacteria|Neisseriales|Neisseriaceae 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01716 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01626 0.0 0.0 0.0 0.02883 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0135 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Proteobacteria|Betaproteobacteria|Neisseriales|Neisseriaceae|Chromobacterium 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01716 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01626 0.0 0.0 0.0 0.02883 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0135 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Proteobacteria|Betaproteobacteria|Neisseriales|Neisseriaceae|Chromobacterium|Chromobacterium_unclassified 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01716 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01626 0.0 0.0 0.0 0.02883 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0135 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0. [...]
+Bacteria|Proteobacteria|Betaproteobacteria|Neisseriales|Neisseriaceae|Kingella 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 [...]
+Bacteria|Proteobacteria|Betaproteobacteria|Neisseriales|Neisseriaceae|Kingella|Kingella_unclassified 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Proteobacteria|Betaproteobacteria|Neisseriales|Neisseriaceae|Neisseria 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Proteobacteria|Betaproteobacteria|Neisseriales|Neisseriaceae|Neisseria|Neisseria_subflava 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 [...]
+Bacteria|Proteobacteria|Betaproteobacteria|Neisseriales|Neisseriaceae|Neisseria|Neisseria_unclassified 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 [...]
+Bacteria|Proteobacteria|Deltaproteobacteria 0.0 0.14507 0.78816 0.0 0.0 0.53369 0.0 0.0 0.32002 0.0 1.14875 0.52568 0.0 0.11788 0.0 0.40917 0.0 0.0 0.0 1.22506 0.38785 0.0 0.0 0.0 0.53579 0.12043 0.0 0.62005 0.37901 0.02085 0.0366 0.52802 0.11525 0.35361 0.14797 0.0 0.11691 0.22011 0.0 0.93566 0.16876 0.25684 0.20368 0.55653 1.04955 0.41897 0.83057 0.19608 0.16341 0.28113 1.10671 0.20992 0.0 0.03162 0.75292 0.63222 0.39445 0.02768 0.19204 0.33332 0.65793 0.06357 0.22337 0.01603 0.59208 0 [...]
+Bacteria|Proteobacteria|Deltaproteobacteria|Desulfovibrionales 0.0 0.14507 0.78816 0.0 0.0 0.53369 0.0 0.0 0.32002 0.0 1.14875 0.52568 0.0 0.11788 0.0 0.40917 0.0 0.0 0.0 1.22506 0.38785 0.0 0.0 0.0 0.53579 0.12043 0.0 0.62005 0.37901 0.02085 0.0366 0.52802 0.11525 0.35361 0.14797 0.0 0.11691 0.22011 0.0 0.93566 0.16876 0.25684 0.20368 0.55653 1.04955 0.41897 0.83057 0.19608 0.16341 0.28113 1.10671 0.20992 0.0 0.03162 0.75292 0.63222 0.39445 0.02768 0.19204 0.33332 0.65793 0.06357 0.2233 [...]
+Bacteria|Proteobacteria|Deltaproteobacteria|Desulfovibrionales|Desulfovibrionaceae 0.0 0.14507 0.78816 0.0 0.0 0.53369 0.0 0.0 0.32002 0.0 1.14875 0.52568 0.0 0.11788 0.0 0.40917 0.0 0.0 0.0 1.22506 0.38785 0.0 0.0 0.0 0.53579 0.12043 0.0 0.62005 0.37901 0.02085 0.0366 0.52802 0.11525 0.35361 0.14797 0.0 0.11691 0.22011 0.0 0.93566 0.16876 0.25684 0.20368 0.55653 1.04955 0.41897 0.83057 0.19608 0.16341 0.28113 1.10671 0.20992 0.0 0.03162 0.75292 0.63222 0.39445 0.02768 0.19204 0.33332 0. [...]
+Bacteria|Proteobacteria|Deltaproteobacteria|Desulfovibrionales|Desulfovibrionaceae|Bilophila 0.0 0.00728 0.78816 0.0 0.0 0.1248 0.0 0.0 0.30989 0.0 1.06144 0.14172 0.0 0.10033 0.0 0.36062 0.0 0.0 0.0 1.19988 0.38785 0.0 0.0 0.0 0.03663 0.0 0.0 0.59131 0.02206 0.00242 0.00125 0.25454 0.04239 0.18198 0.14525 0.0 0.08591 0.00366 0.0 0.15154 0.0308 0.03018 0.18805 0.53999 0.00998 0.28852 0.30164 0.19608 0.0 0.28113 0.59421 0.003 0.0 0.00292 0.15799 0.61404 0.05282 0.02768 0.1441 0.32099 0.61 [...]
+Bacteria|Proteobacteria|Deltaproteobacteria|Desulfovibrionales|Desulfovibrionaceae|Bilophila|Bilophila_unclassified 0.0 0.00273 0.63956 0.0 0.0 0.11197 0.0 0.0 0.24697 0.0 0.88358 0.12197 0.0 0.08225 0.0 0.33637 0.0 0.0 0.0 1.05494 0.24466 0.0 0.0 0.0 0.03663 0.0 0.0 0.55098 0.02206 0.00242 0.00125 0.24173 0.03646 0.16808 0.12069 0.0 0.075 0.00366 0.0 0.13336 0.02617 0.02506 0.16419 0.43788 0.00998 0.2495 0.27315 0.16829 0.0 0.25399 0.49219 0.003 0.0 0.00292 0.13385 0.54535 0.03291 0.026 [...]
+Bacteria|Proteobacteria|Deltaproteobacteria|Desulfovibrionales|Desulfovibrionaceae|Bilophila|Bilophila_wadsworthia 0.0 0.00455 0.1486 0.0 0.0 0.01284 0.0 0.0 0.06292 0.0 0.17786 0.01976 0.0 0.01808 0.0 0.02425 0.0 0.0 0.0 0.14495 0.14319 0.0 0.0 0.0 0.0 0.0 0.0 0.04032 0.0 0.0 0.0 0.01281 0.00593 0.0139 0.02456 0.0 0.01091 0.0 0.0 0.01818 0.00463 0.00511 0.02387 0.10211 0.0 0.03902 0.0285 0.02779 0.0 0.02714 0.10202 0.0 0.0 0.0 0.02413 0.06869 0.01991 0.00154 0.01024 0.07665 0.03231 0.01 [...]
+Bacteria|Proteobacteria|Deltaproteobacteria|Desulfovibrionales|Desulfovibrionaceae|Desulfovibrio 0.0 0.13779 0.0 0.0 0.0 0.40889 0.0 0.0 0.01014 0.0 0.08731 0.38396 0.0 0.01755 0.0 0.04855 0.0 0.0 0.0 0.02517 0.0 0.0 0.0 0.0 0.49916 0.12043 0.0 0.02875 0.35695 0.01843 0.03535 0.27348 0.07286 0.17163 0.00272 0.0 0.031 0.21644 0.0 0.78412 0.13797 0.22666 0.01562 0.01654 1.03956 0.13046 0.52893 0.0 0.16341 0.0 0.5125 0.20691 0.0 0.0287 0.59494 0.01818 0.34164 0.0 0.04794 0.01233 0.04192 0.0 [...]
+Bacteria|Proteobacteria|Deltaproteobacteria|Desulfovibrionales|Desulfovibrionaceae|Desulfovibrio|Desulfovibrio_desulfuricans 0.0 0.13779 0.0 0.0 0.0 0.0155 0.0 0.0 0.01014 0.0 0.08731 0.38396 0.0 0.01755 0.0 0.04855 0.0 0.0 0.0 0.02517 0.0 0.0 0.0 0.0 0.49916 0.12043 0.0 0.02875 0.0 0.01843 0.03535 0.031 0.01211 0.00757 0.00272 0.0 0.031 0.00686 0.0 0.02217 0.0 0.00532 0.01562 0.01654 0.02915 0.02114 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0287 0.0 0.01818 0.01204 0.0 0.04794 0.01233 0.04192 0.037 [...]
+Bacteria|Proteobacteria|Deltaproteobacteria|Desulfovibrionales|Desulfovibrionaceae|Desulfovibrio|Desulfovibrio_piger 0.0 0.0 0.0 0.0 0.0 0.39339 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.35695 0.0 0.0 0.24248 0.06076 0.16407 0.0 0.0 0.0 0.20959 0.0 0.76195 0.13797 0.22134 0.0 0.0 1.01041 0.10932 0.52893 0.0 0.16341 0.0 0.5125 0.20691 0.0 0.0 0.59494 0.0 0.32959 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.30993 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Proteobacteria|Epsilonproteobacteria 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00238 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.07615 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00298 0.0 0.0 0.0366 0.0 0.0 0.0 0.0 0.0 0.0 0.00083 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.06307 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00841 0.0 [...]
+Bacteria|Proteobacteria|Epsilonproteobacteria|Campylobacterales 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00238 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.07615 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00298 0.0 0.0 0.0366 0.0 0.0 0.0 0.0 0.0 0.0 0.00083 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.06307 0.0 0.0 0.0 0.0 0.0 0.0 0 [...]
+Bacteria|Proteobacteria|Epsilonproteobacteria|Campylobacterales|Campylobacteraceae 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00238 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.07615 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00298 0.0 0.0 0.0366 0.0 0.0 0.0 0.0 0.0 0.0 0.00083 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.06307 0.0 0. [...]
+Bacteria|Proteobacteria|Epsilonproteobacteria|Campylobacterales|Campylobacteraceae|Campylobacter 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00238 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.07615 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00298 0.0 0.0 0.0366 0.0 0.0 0.0 0.0 0.0 0.0 0.00083 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Proteobacteria|Epsilonproteobacteria|Campylobacterales|Campylobacteraceae|Campylobacter|Campylobacter_concisus 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00298 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Proteobacteria|Epsilonproteobacteria|Campylobacterales|Campylobacteraceae|Campylobacter|Campylobacter_curvus 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0. [...]
+Bacteria|Proteobacteria|Epsilonproteobacteria|Campylobacterales|Campylobacteraceae|Campylobacter|Campylobacter_hominis 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00238 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.07615 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0366 0.0 0.0 0.0 0.0 0.0 0.0 0.00083 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0. [...]
+Bacteria|Proteobacteria|Epsilonproteobacteria|Campylobacterales|Campylobacteraceae|Campylobacter|Campylobacter_ureolyticus 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 [...]
+Bacteria|Proteobacteria|Epsilonproteobacteria|Campylobacterales|Helicobacteraceae 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0. [...]
+Bacteria|Proteobacteria|Epsilonproteobacteria|Campylobacterales|Helicobacteraceae|Helicobacter 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 [...]
+Bacteria|Proteobacteria|Epsilonproteobacteria|Campylobacterales|Helicobacteraceae|Helicobacter|Helicobacter_pylori 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 [...]
+Bacteria|Proteobacteria|Gammaproteobacteria 0.0 0.47777 0.33293 0.0 0.0 0.01231 0.0 0.0 1.47247 0.0 0.02997 1.17883 0.0 25.61103 0.0 0.01914 0.0 0.0 0.0 0.00564 0.0 0.0 0.0 0.03344 11.18558 0.0 0.0 1.95299 0.06422 0.23183 0.05847 0.62213 0.0 0.33808 0.07782 0.37943 0.29839 0.00847 0.04031 0.16056 0.15327 0.29927 0.01698 0.05139 0.23184 0.05159 0.0 0.02313 0.04467 0.00417 0.30272 0.05805 1.01133 0.35528 1.14399 0.00911 0.27839 0.42069 0.06499 0.99613 0.12638 0.0 0.04194 0.02767 0.03677 0. [...]
+Bacteria|Proteobacteria|Gammaproteobacteria|Aeromonadales 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.37722 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.21942 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0193 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.13817 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Proteobacteria|Gammaproteobacteria|Aeromonadales|Succinivibrionaceae 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.37722 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.21942 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0193 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.13817 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Proteobacteria|Gammaproteobacteria|Aeromonadales|Succinivibrionaceae|Succinatimonas 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.37722 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.21942 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0193 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.13817 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Proteobacteria|Gammaproteobacteria|Aeromonadales|Succinivibrionaceae|Succinatimonas|Succinatimonas_hippei 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.37722 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.21942 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0193 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.13817 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0. [...]
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+Bacteria|Proteobacteria|Gammaproteobacteria|Alteromonadales|Pseudoalteromonadaceae 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.06356 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 [...]
+Bacteria|Proteobacteria|Gammaproteobacteria|Alteromonadales|Pseudoalteromonadaceae|Pseudoalteromonadaceae_unclassified 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.06356 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 [...]
+Bacteria|Proteobacteria|Gammaproteobacteria|Chromatiales 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01466 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Proteobacteria|Gammaproteobacteria|Chromatiales|Ectothiorhodospiraceae 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01466 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Proteobacteria|Gammaproteobacteria|Chromatiales|Ectothiorhodospiraceae|Spiribacter 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01466 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Proteobacteria|Gammaproteobacteria|Chromatiales|Ectothiorhodospiraceae|Spiribacter|Spiribacter_unclassified 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01466 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Proteobacteria|Gammaproteobacteria|Enterobacteriales 0.0 0.47777 0.21737 0.0 0.0 0.00637 0.0 0.0 1.25376 0.0 0.02935 0.69464 0.0 25.60828 0.0 0.0 0.0 0.0 0.0 0.00564 0.0 0.0 0.0 0.0 10.37871 0.0 0.0 1.93501 0.0 0.0 0.05847 0.28927 0.0 0.0028 0.07658 0.32735 0.0116 0.0 0.0 0.09687 0.0119 0.02268 0.01698 0.05139 0.0 0.05159 0.0 0.0 0.03233 0.00417 0.24884 0.0396 0.98309 0.0 1.14399 0.0 0.27839 0.40444 0.06262 0.25187 0.12638 0.0 0.0 0.02767 0.0274 0.0 0.22652 0.0 0.05122 0.80434 0 [...]
+Bacteria|Proteobacteria|Gammaproteobacteria|Enterobacteriales|Enterobacteriaceae 0.0 0.47777 0.21737 0.0 0.0 0.00637 0.0 0.0 1.25376 0.0 0.02935 0.69464 0.0 25.60828 0.0 0.0 0.0 0.0 0.0 0.00564 0.0 0.0 0.0 0.0 10.37871 0.0 0.0 1.93501 0.0 0.0 0.05847 0.28927 0.0 0.0028 0.07658 0.32735 0.0116 0.0 0.0 0.09687 0.0119 0.02268 0.01698 0.05139 0.0 0.05159 0.0 0.0 0.03233 0.00417 0.24884 0.0396 0.98309 0.0 1.14399 0.0 0.27839 0.40444 0.06262 0.25187 0.12638 0.0 0.0 0.02767 0.0274 0.0 0.22652 0. [...]
+Bacteria|Proteobacteria|Gammaproteobacteria|Enterobacteriales|Enterobacteriaceae|Buchnera 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0. [...]
+Bacteria|Proteobacteria|Gammaproteobacteria|Enterobacteriales|Enterobacteriaceae|Buchnera|Buchnera_aphidicola 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0. [...]
+Bacteria|Proteobacteria|Gammaproteobacteria|Enterobacteriales|Enterobacteriaceae|Candidatus_Moranella 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0. [...]
+Bacteria|Proteobacteria|Gammaproteobacteria|Enterobacteriales|Enterobacteriaceae|Candidatus_Moranella|Candidatus_Moranella_endobia 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 [...]
+Bacteria|Proteobacteria|Gammaproteobacteria|Enterobacteriales|Enterobacteriaceae|Citrobacter 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Proteobacteria|Gammaproteobacteria|Enterobacteriales|Enterobacteriaceae|Citrobacter|Citrobacter_freundii 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0. [...]
+Bacteria|Proteobacteria|Gammaproteobacteria|Enterobacteriales|Enterobacteriaceae|Citrobacter|Citrobacter_unclassified 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0. [...]
+Bacteria|Proteobacteria|Gammaproteobacteria|Enterobacteriales|Enterobacteriaceae|Enterobacter 0.0 0.0 0.08499 0.0 0.0 0.0 0.0 0.0 0.15264 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.15394 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.10267 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0263 [...]
+Bacteria|Proteobacteria|Gammaproteobacteria|Enterobacteriales|Enterobacteriaceae|Enterobacteriaceae_noname 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00163 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 [...]
+Bacteria|Proteobacteria|Gammaproteobacteria|Enterobacteriales|Enterobacteriaceae|Enterobacteriaceae_noname|Enterobacteriaceae_bacterium_9_2_54FAA 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00163 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0. [...]
+Bacteria|Proteobacteria|Gammaproteobacteria|Enterobacteriales|Enterobacteriaceae|Enterobacter|Enterobacter_aerogenes 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Proteobacteria|Gammaproteobacteria|Enterobacteriales|Enterobacteriaceae|Enterobacter|Enterobacter_cancerogenus 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.04502 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Proteobacteria|Gammaproteobacteria|Enterobacteriales|Enterobacteriaceae|Enterobacter|Enterobacter_cloacae 0.0 0.0 0.08499 0.0 0.0 0.0 0.0 0.0 0.15264 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.10143 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.10267 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 [...]
+Bacteria|Proteobacteria|Gammaproteobacteria|Enterobacteriales|Enterobacteriaceae|Enterobacter|Enterobacter_hormaechei 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00666 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0. [...]
+Bacteria|Proteobacteria|Gammaproteobacteria|Enterobacteriales|Enterobacteriaceae|Enterobacter|Enterobacter_mori 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00082 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Proteobacteria|Gammaproteobacteria|Enterobacteriales|Enterobacteriaceae|Escherichia 0.0 0.47777 0.13238 0.0 0.0 0.00637 0.0 0.0 0.29461 0.0 0.02935 0.69079 0.0 25.28468 0.0 0.0 0.0 0.0 0.0 0.00564 0.0 0.0 0.0 0.0 10.29884 0.0 0.0 0.0 0.0 0.0 0.00593 0.06116 0.0 0.0028 0.07658 0.32735 0.0116 0.0 0.0 0.09687 0.0119 0.02268 0.01698 0.05139 0.0 0.05159 0.0 0.0 0.03233 0.00417 0.24884 0.0396 0.98309 0.0 1.14399 0.0 0.27839 0.40444 0.06262 0.25187 0.12638 0.0 0.0 0.02767 0.0274 0.0 0. [...]
+Bacteria|Proteobacteria|Gammaproteobacteria|Enterobacteriales|Enterobacteriaceae|Escherichia|Escherichia_coli 0.0 0.47777 0.10179 0.0 0.0 0.00624 0.0 0.0 0.27058 0.0 0.02872 0.59207 0.0 25.28468 0.0 0.0 0.0 0.0 0.0 0.00564 0.0 0.0 0.0 0.0 10.29884 0.0 0.0 0.0 0.0 0.0 0.00536 0.0 0.0 0.0028 0.07658 0.27889 0.00814 0.0 0.0 0.09687 0.0119 0.00222 0.01354 0.05139 0.0 0.05159 0.0 0.0 0.03233 0.00417 0.15743 0.0396 0.98309 0.0 1.14399 0.0 0.27839 0.34901 0.06012 0.2484 0.12638 0.0 0.0 0.02611 [...]
+Bacteria|Proteobacteria|Gammaproteobacteria|Enterobacteriales|Enterobacteriaceae|Escherichia|Escherichia_unclassified 0.0 0.0 0.03059 0.0 0.0 0.00014 0.0 0.0 0.02403 0.0 0.00063 0.09872 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00057 0.06116 0.0 0.0 0.0 0.04847 0.00346 0.0 0.0 0.0 0.0 0.02046 0.00345 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.09141 0.0 0.0 0.0 0.0 0.0 0.0 0.05543 0.0025 0.00347 0.0 0.0 0.0 0.00155 0.02399 0.0 0.0 0.0 0.0 0.01597 0.0 0.00974 0.0 0.0 0.0 [...]
+Bacteria|Proteobacteria|Gammaproteobacteria|Enterobacteriales|Enterobacteriaceae|Klebsiella 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.79188 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 1.93501 0.0 0.0 0.0 0.06908 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.02174 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00947 [...]
+Bacteria|Proteobacteria|Gammaproteobacteria|Enterobacteriales|Enterobacteriaceae|Klebsiella|Klebsiella_oxytoca 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.03684 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01285 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 [...]
+Bacteria|Proteobacteria|Gammaproteobacteria|Enterobacteriales|Enterobacteriaceae|Klebsiella|Klebsiella_pneumoniae 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.79188 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 1.93501 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0. [...]
+Bacteria|Proteobacteria|Gammaproteobacteria|Enterobacteriales|Enterobacteriaceae|Klebsiella|Klebsiella_unclassified 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.03224 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00889 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Proteobacteria|Gammaproteobacteria|Enterobacteriales|Enterobacteriaceae|Pantoea 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01463 0.0 0.0 0.0 0.0 0.31899 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.07863 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01354 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.02827 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Proteobacteria|Gammaproteobacteria|Enterobacteriales|Enterobacteriaceae|Pantoea|Pantoea_unclassified 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01463 0.0 0.0 0.0 0.0 0.31899 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.07863 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01354 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.02827 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0. [...]
+Bacteria|Proteobacteria|Gammaproteobacteria|Enterobacteriales|Enterobacteriaceae|Proteus 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.02193 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Proteobacteria|Gammaproteobacteria|Enterobacteriales|Enterobacteriaceae|Proteus|Proteus_penneri 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01641 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Proteobacteria|Gammaproteobacteria|Enterobacteriales|Enterobacteriaceae|Proteus|Proteus_unclassified 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00552 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0. [...]
+Bacteria|Proteobacteria|Gammaproteobacteria|Enterobacteriales|Enterobacteriaceae|Providencia 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.03061 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Proteobacteria|Gammaproteobacteria|Enterobacteriales|Enterobacteriaceae|Providencia|Providencia_unclassified 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.03061 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0. [...]
+Bacteria|Proteobacteria|Gammaproteobacteria|Enterobacteriales|Enterobacteriaceae|Raoultella 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0051 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 [...]
+Bacteria|Proteobacteria|Gammaproteobacteria|Enterobacteriales|Enterobacteriaceae|Raoultella|Raoultella_ornithinolytica 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0051 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0. [...]
+Bacteria|Proteobacteria|Gammaproteobacteria|Enterobacteriales|Enterobacteriaceae|Shigella 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00384 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0. [...]
+Bacteria|Proteobacteria|Gammaproteobacteria|Enterobacteriales|Enterobacteriaceae|Shigella|Shigella_flexneri 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00384 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Proteobacteria|Gammaproteobacteria|Enterobacteriales|Enterobacteriaceae|Yersinia 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0046 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00124 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Proteobacteria|Gammaproteobacteria|Enterobacteriales|Enterobacteriaceae|Yersinia|Yersinia_unclassified 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0046 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00124 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 [...]
+Bacteria|Proteobacteria|Gammaproteobacteria|Oceanospirillales 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00321 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0. [...]
+Bacteria|Proteobacteria|Gammaproteobacteria|Oceanospirillales|Hahellaceae 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00321 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0. [...]
+Bacteria|Proteobacteria|Gammaproteobacteria|Oceanospirillales|Hahellaceae|Hahellaceae_unclassified 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00321 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 [...]
+Bacteria|Proteobacteria|Gammaproteobacteria|Oceanospirillales|Halomonadaceae 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Proteobacteria|Gammaproteobacteria|Oceanospirillales|Halomonadaceae|Halomonas 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 [...]
+Bacteria|Proteobacteria|Gammaproteobacteria|Oceanospirillales|Halomonadaceae|Halomonas|Halomonas_unclassified 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0. [...]
+Bacteria|Proteobacteria|Gammaproteobacteria|Pasteurellales 0.0 0.0 0.11556 0.0 0.0 0.00594 0.0 0.0 0.21871 0.0 0.00063 0.10697 0.0 0.00275 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01321 0.0 0.0 0.0 0.0 0.06422 0.23183 0.0 0.31455 0.0 0.33529 0.0 0.05207 0.28679 0.0 0.04031 0.06369 0.14137 0.27659 0.0 0.0 0.0 0.0 0.0 0.00567 0.01233 0.0 0.05388 0.01844 0.01962 0.33598 0.0 0.0 0.0 0.00786 0.00237 0.74426 0.0 0.0 0.01752 0.0 0.00938 0.0 0.0 0.0 0.08954 0.0 3.81496 3.77531 0.0 0.0147 0.07707 0. [...]
+Bacteria|Proteobacteria|Gammaproteobacteria|Pasteurellales|Pasteurellaceae 0.0 0.0 0.11556 0.0 0.0 0.00594 0.0 0.0 0.21871 0.0 0.00063 0.10697 0.0 0.00275 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01321 0.0 0.0 0.0 0.0 0.06422 0.23183 0.0 0.31455 0.0 0.33529 0.0 0.05207 0.28679 0.0 0.04031 0.06369 0.14137 0.27659 0.0 0.0 0.0 0.0 0.0 0.00567 0.01233 0.0 0.05388 0.01844 0.01962 0.33598 0.0 0.0 0.0 0.00786 0.00237 0.74426 0.0 0.0 0.01752 0.0 0.00938 0.0 0.0 0.0 0.08954 0.0 3.81496 3.77531 0.0 0 [...]
+Bacteria|Proteobacteria|Gammaproteobacteria|Pasteurellales|Pasteurellaceae|Actinobacillus 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00198 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00459 0.0 0.00565 0.0 0.0 0.0 0.0 0.0 0.00471 0.0 0.00856 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01451 0.0 0.0 0.0 0.0 0.0 0.00689 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0315 0.03249 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01313 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Proteobacteria|Gammaproteobacteria|Pasteurellales|Pasteurellaceae|Actinobacillus|Actinobacillus_unclassified 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00198 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00459 0.0 0.00565 0.0 0.0 0.0 0.0 0.0 0.00471 0.0 0.00856 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01451 0.0 0.0 0.0 0.0 0.0 0.00689 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0315 0.03249 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Proteobacteria|Gammaproteobacteria|Pasteurellales|Pasteurellaceae|Aggregatibacter 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00342 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00565 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00309 0.0 0.0 0.0 0.0 0.0 0.00543 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.04136 0.07149 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00265 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 [...]
+Bacteria|Proteobacteria|Gammaproteobacteria|Pasteurellales|Pasteurellaceae|Aggregatibacter|Aggregatibacter_segnis 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.03344 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0. [...]
+Bacteria|Proteobacteria|Gammaproteobacteria|Pasteurellales|Pasteurellaceae|Aggregatibacter|Aggregatibacter_unclassified 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00342 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00565 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00309 0.0 0.0 0.0 0.0 0.0 0.00543 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.04136 0.03805 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00265 0.0 [...]
+Bacteria|Proteobacteria|Gammaproteobacteria|Pasteurellales|Pasteurellaceae|Haemophilus 0.0 0.0 0.11556 0.0 0.0 0.00594 0.0 0.0 0.21871 0.0 0.00063 0.10499 0.0 0.00275 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01321 0.0 0.0 0.0 0.0 0.06422 0.23183 0.0 0.30997 0.0 0.32621 0.0 0.05207 0.28679 0.0 0.04031 0.05899 0.14137 0.26237 0.0 0.0 0.0 0.0 0.0 0.00567 0.01233 0.0 0.05388 0.01844 0.01962 0.31837 0.0 0.0 0.0 0.00786 0.00237 0.73195 0.0 0.0 0.01752 0.0 0.00938 0.0 0.0 0.0 0.08954 0.0 3.7421 3. [...]
+Bacteria|Proteobacteria|Gammaproteobacteria|Pasteurellales|Pasteurellaceae|Haemophilus|Haemophilus_haemolyticus 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0081 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 [...]
+Bacteria|Proteobacteria|Gammaproteobacteria|Pasteurellales|Pasteurellaceae|Haemophilus|Haemophilus_parainfluenzae 0.0 0.0 0.11556 0.0 0.0 0.00594 0.0 0.0 0.21871 0.0 0.00063 0.10499 0.0 0.00275 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01321 0.0 0.0 0.0 0.0 0.06422 0.23183 0.0 0.30997 0.0 0.3219 0.0 0.05207 0.28245 0.0 0.04031 0.05899 0.14137 0.26237 0.0 0.0 0.0 0.0 0.0 0.00567 0.01233 0.0 0.05388 0.01844 0.01962 0.31837 0.0 0.0 0.0 0.00786 0.00237 0.73195 0.0 0.0 0.01752 0.0 0.00938 0.0 0.0 [...]
+Bacteria|Proteobacteria|Gammaproteobacteria|Pasteurellales|Pasteurellaceae|Haemophilus|Haemophilus_paraphrohaemolyticus 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Proteobacteria|Gammaproteobacteria|Pasteurellales|Pasteurellaceae|Haemophilus|Haemophilus_pittmaniae 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00434 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0. [...]
+Bacteria|Proteobacteria|Gammaproteobacteria|Pasteurellales|Pasteurellaceae|Haemophilus|Haemophilus_sputorum 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00432 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01107 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Proteobacteria|Gammaproteobacteria|Pasteurellales|Pasteurellaceae|Pasteurella 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01532 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 [...]
+Bacteria|Proteobacteria|Gammaproteobacteria|Pasteurellales|Pasteurellaceae|Pasteurella|Pasteurella_unclassified 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01532 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Proteobacteria|Gammaproteobacteria|Pseudomonadales 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01914 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.02023 0.74331 0.0 0.0 0.01798 0.0 0.0 0.0 0.01831 0.0 0.0 0.00124 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01704 0.0 0.0 0.0 0.0 0.01065 0.0 0.02254 0.0 0.01237 0.0 0.00944 0.0 0.0 0.0 0.0 0.01415 0.0 0.01481 0.01955 0.0 0.0 0.0 0.0 0.0 0.00548 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Proteobacteria|Gammaproteobacteria|Pseudomonadales|Moraxellaceae 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.74127 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0. [...]
+Bacteria|Proteobacteria|Gammaproteobacteria|Pseudomonadales|Moraxellaceae|Acinetobacter 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.74127 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Proteobacteria|Gammaproteobacteria|Pseudomonadales|Moraxellaceae|Acinetobacter|Acinetobacter_lwoffii 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.74127 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0. [...]
+Bacteria|Proteobacteria|Gammaproteobacteria|Pseudomonadales|Pseudomonadaceae 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01914 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.02023 0.00204 0.0 0.0 0.01798 0.0 0.0 0.0 0.01831 0.0 0.0 0.00124 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01704 0.0 0.0 0.0 0.0 0.01065 0.0 0.02254 0.0 0.01237 0.0 0.00944 0.0 0.0 0.0 0.0 0.01415 0.0 0.01481 0.01955 0.0 0.0 0.0 0.0 0.0 0.00548 0.0 [...]
+Bacteria|Proteobacteria|Gammaproteobacteria|Pseudomonadales|Pseudomonadaceae|Pseudomonas 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01914 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.02023 0.00204 0.0 0.0 0.01798 0.0 0.0 0.0 0.01831 0.0 0.0 0.00124 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01704 0.0 0.0 0.0 0.0 0.01065 0.0 0.02254 0.0 0.01237 0.0 0.00944 0.0 0.0 0.0 0.0 0.01415 0.0 0.01481 0.01955 0.0 0.0 0.0 0.0 0.0 [...]
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+Bacteria|Proteobacteria|Gammaproteobacteria|Pseudomonadales|Pseudomonadaceae|Pseudomonas|Pseudomonas_unclassified 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01914 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.02023 0.0 0.0 0.0 0.01798 0.0 0.0 0.0 0.01831 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01704 0.0 0.0 0.0 0.0 0.01065 0.0 0.02254 0.0 0.01237 0.0 0.0 0.0 0.0 0.0 0.0 0.01415 0.0 0.01481 0.01955 0.0 0. [...]
+Bacteria|Proteobacteria|Gammaproteobacteria|Xanthomonadales 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00847 0.0 0.0 0.0 0.0 0.0 0.0 0.01242 0.0 0.0 0.01745 0.0 0.0 0.0 0.0 0.00863 0.0 0.0 0.00911 0.0 0.00839 0.0 0.0 0.0 0.0 0.00738 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00535 0.0 0.01364 0.0 0.00652 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Proteobacteria|Gammaproteobacteria|Xanthomonadales|Sinobacteraceae 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00847 0.0 0.0 0.0 0.0 0.0 0.0 0.01242 0.0 0.0 0.01745 0.0 0.0 0.0 0.0 0.00863 0.0 0.0 0.00911 0.0 0.00839 0.0 0.0 0.0 0.0 0.00738 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00535 0.0 0.01364 0.0 0.00652 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Bacteria|Proteobacteria|Gammaproteobacteria|Xanthomonadales|Sinobacteraceae|Sinobacteraceae_unclassified 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00847 0.0 0.0 0.0 0.0 0.0 0.0 0.01242 0.0 0.0 0.01745 0.0 0.0 0.0 0.0 0.00863 0.0 0.0 0.00911 0.0 0.00839 0.0 0.0 0.0 0.0 0.00738 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00535 0.0 0.01364 0.0 0.00652 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
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+Bacteria|Spirochaetes|Spirochaetia|Spirochaetales|Spirochaetaceae|Sphaerochaeta|Sphaerochaeta_unclassified 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.00224 0.00271 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 [...]
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+Bacteria|Verrucomicrobia 0.0 5.03726 0.0 0.0 0.0 0.0118 0.0 0.0 1.54423 0.0 5.60197 4.87639 0.0 0.1845 0.0 0.05678 0.0 0.0 0.0 0.0 0.60299 0.0 0.0 0.02128 3.26783 0.25554 0.0 0.56608 0.0 0.44581 0.05578 0.01103 0.0 4.71735 0.00622 6.16025 0.00298 0.23385 0.71763 0.12836 0.9735 1.1199 0.00776 0.22568 0.09581 0.0 1.68442 0.0 1.51775 0.03099 0.0 0.0 9.2471 0.0 0.03316 0.09221 1.14796 1.69856 16.07583 0.0 0.0 0.0 0.63987 0.03911 2.42723 0.11026 0.31368 0.0 0.13438 2.07472 0.0 0.02307 0.04356 [...]
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+Bacteria|Verrucomicrobia|Verrucomicrobiae|Verrucomicrobiales|Verrucomicrobiaceae|Akkermansia 0.0 5.03726 0.0 0.0 0.0 0.0118 0.0 0.0 1.54423 0.0 5.60197 4.87639 0.0 0.1845 0.0 0.05678 0.0 0.0 0.0 0.0 0.60299 0.0 0.0 0.02128 3.26783 0.25554 0.0 0.56608 0.0 0.44581 0.05578 0.01103 0.0 4.71735 0.00622 6.16025 0.00298 0.23385 0.71763 0.12836 0.9735 1.1199 0.00776 0.22568 0.09581 0.0 1.68442 0.0 1.51775 0.03099 0.0 0.0 9.2471 0.0 0.03316 0.09221 1.14796 1.69856 16.07583 0.0 0.0 0.0 0.63987 0.0 [...]
+Bacteria|Verrucomicrobia|Verrucomicrobiae|Verrucomicrobiales|Verrucomicrobiaceae|Akkermansia|Akkermansia_muciniphila 0.0 5.03726 0.0 0.0 0.0 0.0118 0.0 0.0 1.54423 0.0 5.60197 4.87639 0.0 0.1845 0.0 0.05678 0.0 0.0 0.0 0.0 0.60299 0.0 0.0 0.02128 3.26783 0.25554 0.0 0.56608 0.0 0.44581 0.05578 0.01103 0.0 4.71735 0.00622 6.16025 0.00298 0.23385 0.71763 0.12836 0.9735 1.1199 0.00776 0.22568 0.09581 0.0 1.68442 0.0 1.51775 0.03099 0.0 0.0 9.2471 0.0 0.03316 0.09221 1.14796 1.69856 16.07583 [...]
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+Viruses|Viruses_noname|Viruses_noname|Viruses_noname|Togaviridae|Alphavirus 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Viruses|Viruses_noname|Viruses_noname|Viruses_noname|Togaviridae|Alphavirus|Venezuelan_equine_encephalitis_virus 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Viruses|Viruses_noname|Viruses_noname|Viruses_noname|Viruses_noname 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.04097 0.0 0.0 0.0 0.06483 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.03136 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.05325 0.0 0.0 0.0 0.0 0.0 0.02645 0.0 0.0 0.0 0.0 0.02464 0.0 0.0 0.0 0.0 0.04428 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Viruses|Viruses_noname|Viruses_noname|Viruses_noname|Viruses_noname|Viruses_noname 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.04097 0.0 0.0 0.0 0.06483 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.03136 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.05325 0.0 0.0 0.0 0.0 0.0 0.02645 0.0 0.0 0.0 0.0 0.02464 0.0 0.0 0.0 0.0 0.04428 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 [...]
+Viruses|Viruses_noname|Viruses_noname|Viruses_noname|Viruses_noname|Viruses_noname|Alternanthera_yellow_vein_betasatellite 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.02464 0.0 0.0 0.0 0.0 0.04428 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0 [...]
+Viruses|Viruses_noname|Viruses_noname|Viruses_noname|Viruses_noname|Viruses_noname|Emilia_yellow_vein_virus_associated_DNA_beta 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.03136 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.02645 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Viruses|Viruses_noname|Viruses_noname|Viruses_noname|Viruses_noname|Viruses_noname|Honeysuckle_yellow_vein_betasatellite 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.04097 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+Viruses|Viruses_noname|Viruses_noname|Viruses_noname|Viruses_noname|Viruses_noname|Malvastrum_leaf_curl_Philippines_betasatellite 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.05325 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0. [...]
+Viruses|Viruses_noname|Viruses_noname|Viruses_noname|Viruses_noname|Viruses_noname|Tomato_yellow_leaf_curl_Vietnam_virus_satellite_DNA_beta 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.06483 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
+unclassified 100.0 0.0 0.0 100.0 100.0 0.0 100.0 100.0 0.0 100.0 0.0 0.0 100.0 0.0 100.0 0.0 100.0 100.0 100.0 0.0 0.0 100.0 100.0 0.0 0.0 0.0 100.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 [...]
diff --git a/examples/hmp_metahit/merge-very-good.txt.out b/examples/hmp_metahit/merge-very-good.txt.out
new file mode 100644
index 0000000..aeb8494
--- /dev/null
+++ b/examples/hmp_metahit/merge-very-good.txt.out
@@ -0,0 +1,890 @@
+Bacteria.Firmicutes.Clostridia.Clostridiales.Eubacteriaceae.Eubacterium.Eubacterium_rectale 4.58428185731 -
+Bacteria.Actinobacteria.Actinobacteria.Coriobacteriales.Coriobacteriaceae 3.62888316838 MetaHIT 3.17761346291 6.7747022094e-09
+Bacteria.Firmicutes.Bacilli.Lactobacillales.Streptococcaceae 3.40384971532 MetaHIT 3.02631606761 0.00125578805741
+Bacteria.Firmicutes.Clostridia.Clostridiales.Eubacteriaceae 4.91855554433 MetaHIT 4.13625191025 0.000308605880108
+Viruses.Viruses_noname.Viruses_noname.Caudovirales.Siphoviridae.Siphoviridae_noname.Lactococcus_phage_BM13 1.25057794991 -
+Bacteria.Firmicutes.Bacilli.Lactobacillales.Lactobacillaceae.Lactobacillus.Lactobacillus_ruminis 2.63477030987 0.000175390712225
+Bacteria.Proteobacteria.Gammaproteobacteria.Enterobacteriales.Enterobacteriaceae.Escherichia.Escherichia_unclassified 1.8319408419 -
+Bacteria.Firmicutes.Bacilli.Lactobacillales.Lactobacillaceae.Lactobacillus.Lactobacillus_reuteri 2.55680425718 -
+Bacteria.Firmicutes.Clostridia.Clostridiales.Eubacteriaceae.Anaerofustis 0.605793204705 HMP 3.41433367355 0.0237387429618
+Bacteria.Bacteroidetes.Sphingobacteriia.Sphingobacteriales.Sphingobacteriaceae.Sphingobacterium.Sphingobacterium_unclassified 0.349738535962 MetaHIT 3.25747931246 0.00335428910734
+Bacteria.Firmicutes.Clostridia.Clostridiales.Lachnospiraceae.Anaerostipes 2.83224497434 4.68787802489e-09
+Bacteria.Proteobacteria.Alphaproteobacteria.Rhizobiales.Bartonellaceae.Bartonella 1.26467475808 0.000133922718974
+Bacteria.Proteobacteria.Betaproteobacteria.Neisseriales.Neisseriaceae.Kingella 0.0 -
+Eukaryota.Ascomycota.Saccharomycetes.Saccharomycetales.Saccharomycetaceae 1.20783286295 6.15129418316e-09
+Bacteria.Bacteroidetes.Bacteroidia.Bacteroidales.Bacteroidaceae.Bacteroides.Bacteroides_barnesiae 3.40665267471 MetaHIT 3.39616808474 0.0393019864501
+Bacteria.Proteobacteria.Deltaproteobacteria.Desulfovibrionales.Desulfovibrionaceae.Desulfovibrio.Desulfovibrio_piger 2.82504825508 0.0016375315212
+Bacteria.Proteobacteria.Betaproteobacteria.Burkholderiales.Burkholderiales_noname.Burkholderiales_noname 3.15608154377 -
+Bacteria.Actinobacteria.Actinobacteria.Bifidobacteriales.Bifidobacteriaceae.Bifidobacterium.Bifidobacterium_catenulatum 2.42901781215 -
+Bacteria.Candidatus_Saccharibacteria.Candidatus_Saccharibacteria_noname 0.179005983218 -
+Bacteria.Proteobacteria.Gammaproteobacteria.Enterobacteriales.Enterobacteriaceae.Providencia 0.490228135 -
+Archaea.Euryarchaeota.Methanobacteria.Methanobacteriales 3.52537506316 MetaHIT 3.22231932651 2.37509692531e-05
+Bacteria.Actinobacteria.Actinobacteria.Coriobacteriales.Coriobacteriaceae.Eggerthella.Eggerthella_sp_1_3_56FAA 1.01825486573 -
+Bacteria.Firmicutes.Negativicutes.Selenomonadales.Acidaminococcaceae.Phascolarctobacterium 3.86194875774 MetaHIT 3.46138704097 0.000442957618486
+Bacteria.Bacteroidetes.Bacteroidia.Bacteroidales.Porphyromonadaceae.Coprobacter.Coprobacter_fastidiosus 2.61748325074 2.44740958868e-05
+Bacteria.Bacteroidetes.Bacteroidia.Bacteroidales.Bacteroidaceae.Bacteroides 5.70641157728 HMP 5.23759140087 2.65577079381e-25
+Bacteria.Firmicutes.Clostridia.Clostridiales.Clostridiales_Family_XI_Incertae_Sedis.Anaerococcus.Anaerococcus_prevotii 0.0 -
+Bacteria.Proteobacteria.Gammaproteobacteria.Pasteurellales.Pasteurellaceae.Pasteurella 0.189623570699 -
+Bacteria.Bacteroidetes.Bacteroidia.Bacteroidales.Porphyromonadaceae.Porphyromonas.Porphyromonas_somerae 1.46438660305 -
+Bacteria.Proteobacteria.Betaproteobacteria.Burkholderiales.Comamonadaceae.Polaromonas 0.765148399801 -
+Bacteria.Firmicutes.Clostridia.Clostridiales.Peptostreptococcaceae.Peptostreptococcaceae_noname.Clostridium_difficile 0.0 -
+Bacteria.Bacteroidetes.Bacteroidia.Bacteroidales.Bacteroidaceae.Bacteroides.Bacteroides_sp_1_1_6 2.46497402445 -
+Bacteria.Firmicutes.Clostridia.Clostridiales.Lachnospiraceae.Catonella.Catonella_morbi 0.0 -
+Bacteria.Proteobacteria.Epsilonproteobacteria.Campylobacterales.Campylobacteraceae.Campylobacter 1.68871423725 0.0298843013525
+Bacteria.Firmicutes.Bacilli.Lactobacillales.Lactobacillaceae.Lactobacillus.Lactobacillus_jensenii 0.0 -
+Bacteria.Bacteroidetes 5.87166750411 HMP 5.28157685184 4.20639869932e-25
+Bacteria.Firmicutes.Erysipelotrichia.Erysipelotrichales.Erysipelotrichaceae.Erysipelotrichaceae_noname.Erysipelotrichaceae_bacterium_3_1_53 0.209569145686 -
+Viruses.Viruses_noname.Viruses_noname.Nidovirales.Coronaviridae.Betacoronavirus 0.0 -
+Bacteria.Chlamydiae.Chlamydiia.Chlamydiales.Chlamydiaceae.Chlamydophila.Chlamydophila_unclassified 0.0 -
+Bacteria.Firmicutes.Clostridia.Clostridiales.Oscillospiraceae.Oscillibacter.Oscillibacter_valericigenes 0.0 -
+Viruses.Viruses_noname.Viruses_noname.Caudovirales.Siphoviridae.Siphoviridae_noname.Lactobacillus_phage_Lc_Nu 0.0 -
+Bacteria.Firmicutes.Bacilli.Lactobacillales.Lactobacillaceae.Lactobacillus.Lactobacillus_iners 0.738141520821 -
+Bacteria.Bacteroidetes.Bacteroidia.Bacteroidales.Prevotellaceae.Prevotella.Prevotella_buccalis 1.19289957431 -
+Bacteria.Firmicutes.Bacilli.Lactobacillales.Leuconostocaceae.Leuconostoc.Leuconostoc_unclassified 0.455844210527 -
+Bacteria.Bacteroidetes.Flavobacteriia.Flavobacteriales.Flavobacteriaceae 2.164560128 9.77374156167e-14
+Bacteria.Proteobacteria.Epsilonproteobacteria.Campylobacterales.Helicobacteraceae.Helicobacter.Helicobacter_pylori 0.164481237659 -
+Viruses.Viruses_noname.Viruses_noname.Caudovirales.Siphoviridae.C2likevirus 2.62260905629 -
+Bacteria.Firmicutes.Negativicutes.Selenomonadales.Veillonellaceae.Dialister.Dialister_micraerophilus 0.0 -
+Viruses.Viruses_noname.Viruses_noname.Caudovirales.Myoviridae.PhiCD119likevirus.PhiCD119likevirus_unclassified 0.0 -
+Bacteria.Actinobacteria.Actinobacteria.Actinomycetales.Corynebacteriaceae 0.0 -
+Bacteria.Proteobacteria.Epsilonproteobacteria.Campylobacterales.Campylobacteraceae 1.68871423725 0.0298843013525
+Bacteria.Proteobacteria.Gammaproteobacteria.Enterobacteriales.Enterobacteriaceae.Enterobacter.Enterobacter_aerogenes 0.354224887595 -
+Bacteria.Firmicutes.Clostridia.Clostridiales.Clostridiales_noname.Pseudoflavonifractor 2.24500140378 1.81898208147e-13
+Bacteria.Bacteroidetes.Bacteroidia.Bacteroidales.Bacteroidaceae.Bacteroides.Bacteroides_fragilis 4.12925624352 -
+Bacteria.Bacteroidetes.Bacteroidia.Bacteroidales.Bacteroidales_noname.Bacteroidales_noname 3.72279980098 0.0419201507157
+Bacteria.Firmicutes.Clostridia.Clostridiales.Peptostreptococcaceae.Peptostreptococcaceae_noname.Clostridium_bartlettii 2.47692819356 0.00225657697331
+Bacteria.Proteobacteria.Gammaproteobacteria.Enterobacteriales.Enterobacteriaceae.Klebsiella.Klebsiella_unclassified 0.770554502284 -
+Bacteria.Firmicutes.Clostridia.Clostridiales.Clostridiaceae.Clostridium.Clostridium_citroniae 1.82938175128 0.0248994016791
+Bacteria.Deinococcus_Thermus.Deinococci 2.27354372855 4.35362749418e-29
+Bacteria.Bacteroidetes.Bacteroidia.Bacteroidales.Rikenellaceae.Alistipes.Alistipes_shahii 4.08889072601 -
+Bacteria.Bacteroidetes.Sphingobacteriia.Sphingobacteriales.Sphingobacteriaceae.Sphingobacterium 0.349738535962 MetaHIT 3.15261615169 0.00335428910734
+Bacteria.Spirochaetes.Spirochaetia 1.64634432136 -
+Viruses.Viruses_noname.Viruses_noname.Caudovirales.Siphoviridae 3.3160188773 0.0199980780282
+Bacteria.Proteobacteria.Gammaproteobacteria.Pasteurellales.Pasteurellaceae.Actinobacillus.Actinobacillus_unclassified 1.18477743881 -
+Bacteria.Bacteroidetes.Sphingobacteriia.Sphingobacteriales.Sphingobacteriaceae.Pedobacter.Pedobacter_unclassified 2.06362520946 4.43333963816e-13
+Bacteria.Firmicutes.Clostridia.Clostridiales.Clostridiaceae.Clostridium.Clostridium_bolteae 3.10007067373 -
+Bacteria.Bacteroidetes.Bacteroidetes_noname.Bacteroidetes_noname.Bacteroidetes_noname 0.0 -
+Bacteria.Firmicutes.Bacilli.Lactobacillales.Carnobacteriaceae 1.21237595819 -
+Bacteria.Proteobacteria.Gammaproteobacteria.Enterobacteriales 3.90008969368 -
+Bacteria.Firmicutes.Bacilli.Bacillales.Staphylococcaceae.Staphylococcus.Staphylococcus_saprophyticus 0.0 -
+Bacteria.Synergistetes.Synergistia.Synergistales.Synergistaceae 2.57133463097 -
+Bacteria.Bacteroidetes.Bacteroidia.Bacteroidales.Bacteroidaceae.Bacteroides.Bacteroides_fluxus 0.0 -
+Bacteria.Bacteroidetes.Bacteroidia.Bacteroidales.Bacteroidaceae.Bacteroides.Bacteroides_ovatus 4.92433223035 HMP 4.57488813413 1.93312851795e-13
+Bacteria.Actinobacteria.Actinobacteria.Bifidobacteriales.Bifidobacteriaceae.Scardovia 0.436692601452 0.0351403068985
+Viruses.Viruses_noname.Viruses_noname.Viruses_noname.Retroviridae.Gammaretrovirus.Woolly_monkey_sarcoma_virus 0.716256311854 -
+Bacteria.Proteobacteria.Gammaproteobacteria.Enterobacteriales.Enterobacteriaceae.Citrobacter.Citrobacter_freundii 0.780798920837 -
+Bacteria.Firmicutes.Erysipelotrichia.Erysipelotrichales.Erysipelotrichaceae.Catenibacterium.Catenibacterium_mitsuokai 2.97971434493 -
+Bacteria.Firmicutes.Erysipelotrichia 3.63467366361 MetaHIT 3.08509440974 9.82038079913e-05
+Bacteria.Proteobacteria.Alphaproteobacteria.Rhizobiales 1.26467475808 0.0027220538131
+Bacteria.Actinobacteria.Actinobacteria.Coriobacteriales.Coriobacteriaceae.Slackia 1.15438400732 -
+Bacteria.Firmicutes.Bacilli.Lactobacillales.Streptococcaceae.Streptococcus.Streptococcus_salivarius 3.03257562306 4.29145002285e-09
+Bacteria.Tenericutes.Mollicutes.Entomoplasmatales.Spiroplasmataceae.Spiroplasma.Spiroplasma_unclassified 0.0 -
+Bacteria.Proteobacteria.Deltaproteobacteria.Desulfovibrionales 3.53294871718 MetaHIT 3.16077739224 5.80955203023e-10
+Bacteria.Proteobacteria.Deltaproteobacteria.Desulfovibrionales.Desulfovibrionaceae.Desulfovibrio.Desulfovibrio_desulfuricans 2.50911967758 1.5551707123e-09
+Viruses.Viruses_noname.Viruses_noname.Nidovirales.Coronaviridae.Betacoronavirus.Murine_coronavirus 0.0 -
+Eukaryota.Ascomycota.Eurotiomycetes.Eurotiales 0.0 -
+Bacteria.Actinobacteria.Actinobacteria.Bifidobacteriales.Bifidobacteriaceae.Bifidobacterium.Bifidobacterium_dentium 1.09571515551 0.00665018521435
+Bacteria.Proteobacteria.Betaproteobacteria.Burkholderiales.Oxalobacteraceae 2.31129354036 0.0022060468336
+Bacteria.Bacteroidetes.Flavobacteriia.Flavobacteriales.Flavobacteriaceae.Cellulophaga.Cellulophaga_unclassified 2.1583868623 9.96323735481e-14
+Bacteria.Proteobacteria.Epsilonproteobacteria 1.70151207731 0.0209130105172
+Bacteria.Chlorobi.Chlorobia 0.735227809265 0.000670338618477
+Bacteria.Bacteroidetes.Bacteroidia.Bacteroidales.Bacteroidaceae.Bacteroides.Bacteroides_sp_1_1_30 3.14412760024 -
+Bacteria.Deinococcus_Thermus.Deinococci.Deinococcales.Deinococcaceae.Deinococcus 2.27354372855 4.35362749418e-29
+Bacteria.Proteobacteria.Gammaproteobacteria.Pasteurellales.Pasteurellaceae.Aggregatibacter.Aggregatibacter_segnis 0.578048498496 -
+Bacteria.Actinobacteria.Actinobacteria.Actinomycetales.Micrococcaceae.Rothia.Rothia_dentocariosa 0.0 -
+Bacteria.Proteobacteria.Betaproteobacteria.Burkholderiales.Burkholderiaceae 1.82253129487 1.07781533244e-09
+Bacteria.Chlamydiae.Chlamydiia 0.0 -
+Bacteria.Proteobacteria.Gammaproteobacteria.Pasteurellales.Pasteurellaceae.Actinobacillus 1.18477743881 -
+Bacteria.Candidatus_Saccharibacteria.Candidatus_Saccharibacteria_noname.Candidatus_Saccharibacteria_noname.Candidatus_Saccharibacteria_noname.Candidatus_Saccharibacteria_noname.candidate_division_TM7_single_cell_isolate_TM7c 0.0 -
+Bacteria.Firmicutes.Bacilli.Lactobacillales.Streptococcaceae.Lactococcus.Lactococcus_raffinolactis 0.0 -
+Bacteria.Firmicutes.Bacilli.Lactobacillales.Leuconostocaceae 2.78770586607 0.00534543203291
+Viruses.Viruses_noname.Viruses_noname.Viruses_noname.Orthomyxoviridae.Influenzavirus_A 0.0 -
+Bacteria.Firmicutes.Clostridia.Clostridiales.Lachnospiraceae.Anaerostipes.Anaerostipes_hadrus 2.83218235519 7.26868447615e-10
+Bacteria.Bacteroidetes.Bacteroidia.Bacteroidales.Bacteroidaceae.Bacteroides.Bacteroides_dorei 4.54383161128 -
+Bacteria.Firmicutes.Negativicutes.Selenomonadales.Veillonellaceae.Megamonas.Megamonas_rupellensis 1.21556719646 -
+Bacteria.Actinobacteria.Actinobacteria.Actinomycetales.Actinomycetaceae.Varibaculum 0.0 -
+Bacteria.Acidobacteria.Acidobacteriia.Acidobacteriales.Acidobacteriaceae.Granulicella 1.81983629728 9.53859316605e-16
+Bacteria.Firmicutes.Erysipelotrichia.Erysipelotrichales.Erysipelotrichaceae.Turicibacter 2.2269502182 -
+Viruses.Viruses_noname.Viruses_noname.Viruses_noname.Retroviridae.Retroviridae_noname 1.62329106107 1.17349604671e-05
+Bacteria.Firmicutes.Clostridia.Clostridiales.Ruminococcaceae.Anaerotruncus.Anaerotruncus_unclassified 3.40513930618 MetaHIT 3.10365435735 5.62511776177e-24
+Bacteria.Firmicutes.Bacilli.Lactobacillales.Carnobacteriaceae.Granulicatella.Granulicatella_elegans 0.0600180867606 -
+Bacteria.Proteobacteria.Gammaproteobacteria.Pasteurellales.Pasteurellaceae.Aggregatibacter.Aggregatibacter_unclassified 1.0300801893 0.000670338618477
+Bacteria.Proteobacteria.Gammaproteobacteria.Xanthomonadales 1.23550293447 2.4451552887e-05
+Bacteria.Actinobacteria.Actinobacteria.Actinomycetales.Actinomycetaceae.Mobiluncus.Mobiluncus_curtisii 0.0 -
+Bacteria.Firmicutes.Bacilli.Lactobacillales.Enterococcaceae.Enterococcus.Enterococcus_gallinarum 0.0 -
+Bacteria.Actinobacteria.Actinobacteria.Bifidobacteriales.Bifidobacteriaceae.Gardnerella.Gardnerella_vaginalis 0.7823488671 -
+Bacteria.Bacteroidetes.Bacteroidia.Bacteroidales.Porphyromonadaceae.Parabacteroides.Parabacteroides_sp_D13 2.48614126799 -
+Bacteria.Firmicutes.Erysipelotrichia.Erysipelotrichales.Erysipelotrichaceae 3.63467366361 MetaHIT 3.08509440974 9.82038079913e-05
+Bacteria.Firmicutes.Clostridia.Clostridiales.Clostridiales_noname 3.19764471784 0.00172029600324
+Archaea.Euryarchaeota.Methanobacteria.Methanobacteriales.Methanobacteriaceae.Methanobrevibacter.Methanobrevibacter_unclassified 2.69041535982 1.6242303935e-07
+Bacteria.Firmicutes.Clostridia.Clostridiales.Ruminococcaceae.Ruminococcaceae_noname.Ruminococcaceae_bacterium_D16 2.23293453613 2.06076696035e-14
+Bacteria.Proteobacteria.Gammaproteobacteria.Xanthomonadales.Sinobacteraceae.Sinobacteraceae_unclassified 1.23550293447 2.4451552887e-05
+Bacteria.Bacteroidetes.Bacteroidia.Bacteroidales.Prevotellaceae.Prevotella.Prevotella_timonensis 1.24897827201 -
+Bacteria.Proteobacteria.Alphaproteobacteria.Rhizobiales.Bradyrhizobiaceae.Afipia 0.537230036789 -
+Bacteria.Proteobacteria.Alphaproteobacteria.Sphingomonadales.Sphingomonadaceae.Sphingomonas 0.0 -
+Viruses.Viruses_noname.Viruses_noname.Viruses_noname.Viruses_noname.Viruses_noname 1.4992982146 0.000670338618477
+Bacteria.Fusobacteria.Fusobacteriia.Fusobacteriales.Fusobacteriaceae 2.58685429186 -
+Bacteria.Bacteroidetes.Bacteroidia.Bacteroidales.Rikenellaceae 4.92543665685 HMP 4.00697904731 0.0160039761437
+Bacteria.Proteobacteria.Betaproteobacteria.Burkholderiales.Sutterellaceae.Parasutterella 2.92127334193 -
+Bacteria.Bacteroidetes.Flavobacteriia.Flavobacteriales.Flavobacteriaceae.Riemerella 0.0 -
+Bacteria.Firmicutes.Clostridia.Clostridiales.Lachnospiraceae.Lachnospiraceae_noname.Lachnospiraceae_bacterium_2_1_46FAA 0.657358554637 -
+Bacteria.Bacteroidetes.Bacteroidia.Bacteroidales.Bacteroidaceae.Bacteroides.Bacteroides_salanitronis 2.91487076669 0.00335428910734
+Bacteria.Firmicutes.Erysipelotrichia.Erysipelotrichales.Erysipelotrichaceae.Erysipelotrichaceae_noname.Clostridium_spiroforme 2.60402781698 0.00475724134356
+Bacteria.Proteobacteria.Gammaproteobacteria.Pseudomonadales.Pseudomonadaceae.Pseudomonas 1.37052616744 0.00162437498592
+Bacteria.Firmicutes.Clostridia.Clostridiales.Lachnospiraceae.Blautia.Ruminococcus_gnavus 3.3257556871 2.68725540312e-10
+Bacteria.Proteobacteria.Deltaproteobacteria.Desulfovibrionales.Desulfovibrionaceae.Bilophila.Bilophila_wadsworthia 2.54345721606 3.8382316772e-08
+Eukaryota.Ascomycota.Saccharomycetes.Saccharomycetales.Saccharomycetales_noname 0.0 -
+Bacteria.Fusobacteria.Fusobacteriia.Fusobacteriales.Fusobacteriaceae.Fusobacterium.Fusobacterium_mortiferum 2.54475059715 -
+Bacteria.Firmicutes.Bacilli.Lactobacillales.Streptococcaceae.Streptococcus.Streptococcus_intermedius 0.0 -
+Bacteria.Proteobacteria.Betaproteobacteria.Neisseriales.Neisseriaceae 1.07195634156 -
+Bacteria.Fusobacteria.Fusobacteriia.Fusobacteriales.Leptotrichiaceae.Leptotrichiaceae_unclassified 0.598646830113 -
+Viruses.Viruses_noname.Viruses_noname.Caudovirales.Podoviridae.P22likevirus 1.38818012795 -
+Bacteria.Firmicutes.Bacilli.Lactobacillales.Lactobacillaceae.Lactobacillus.Lactobacillus_salivarius 1.677514783 -
+Bacteria.Actinobacteria.Actinobacteria.Bifidobacteriales.Bifidobacteriaceae.Bifidobacterium.Bifidobacterium_longum 3.53548208576 MetaHIT 3.11501058334 1.78283307748e-06
+Bacteria.Firmicutes.Clostridia.Clostridiales.Lachnospiraceae.Lachnospiraceae_noname.Lachnospiraceae_bacterium_5_1_57FAA 0.812102718586 -
+Bacteria.Candidatus_Saccharibacteria.Candidatus_Saccharibacteria_noname.Candidatus_Saccharibacteria_noname.Candidatus_Saccharibacteria_noname.Candidatus_Saccharibacteria_noname_unclassified 0.0313064286675 -
+Bacteria.Firmicutes.Clostridia.Clostridiales.Clostridiales_Family_XI_Incertae_Sedis.Clostridiales_Family_XI_Incertae_Sedis_noname 0.0 -
+Bacteria.Firmicutes.Clostridia.Clostridiales.Clostridiaceae.Clostridium.Clostridium_hylemonae 0.0 -
+Bacteria.Actinobacteria.Actinobacteria.Actinomycetales.Actinomycetaceae.Varibaculum.Varibaculum_cambriense 0.0 -
+Bacteria.Actinobacteria.Actinobacteria.Coriobacteriales.Coriobacteriaceae.Atopobium.Atopobium_rimae 0.114954515702 -
+Bacteria.Firmicutes.Clostridia.Clostridiales.Lachnospiraceae.Oribacterium 0.00739427595607 -
+Bacteria.Firmicutes.Erysipelotrichia.Erysipelotrichales.Erysipelotrichaceae.Coprobacillus 2.33371106656 -
+Bacteria.Actinobacteria.Actinobacteria.Bifidobacteriales.Bifidobacteriaceae 4.05530271663 MetaHIT 3.65227518447 4.49674238249e-09
+Viruses.Viruses_noname.Viruses_noname.Caudovirales.Siphoviridae.Siphoviridae_noname.Lactobacillus_phage_PL_1 0.0 -
+Bacteria.Firmicutes.Clostridia.Clostridiales.Clostridiales_noname.Clostridiales_noname.Clostridiales_bacterium_1_7_47FAA 1.89094575839 -
+Bacteria.Firmicutes.Bacilli.Lactobacillales.Streptococcaceae.Streptococcus 3.39777959769 MetaHIT 3.035481379 0.000519042144834
+Bacteria.Bacteroidetes.Bacteroidia.Bacteroidales.Prevotellaceae.Prevotella.Prevotella_bergensis 0.0 -
+Eukaryota.Ascomycota.Saccharomycetes.Saccharomycetales.Saccharomycetaceae.Naumovozyma 0.350717797362 MetaHIT 3.25512999126 0.00335428910734
+Bacteria.Bacteroidetes.Bacteroidia.Bacteroidales.Prevotellaceae.Prevotella.Prevotella_oralis 0.0 -
+Bacteria.Bacteroidetes.Bacteroidia.Bacteroidales.Porphyromonadaceae.Butyricimonas 2.00874717844 7.69645063136e-05
+Bacteria.Chlorobi.Chlorobia.Chlorobiales.Chlorobiaceae.Chlorobium.Chlorobium_phaeobacteroides 0.735227809265 0.000670338618477
+Bacteria.Firmicutes.Clostridia.Clostridiales.Lachnospiraceae.Lachnospiraceae_noname.Lachnospiraceae_bacterium_1_4_56FAA 1.60697645325 0.00263773891851
+Bacteria.Actinobacteria.Actinobacteria.Actinomycetales.Brevibacteriaceae.Brevibacterium.Brevibacterium_unclassified 0.839357409135 MetaHIT 3.15795275944 0.00753961701125
+Bacteria.Actinobacteria.Actinobacteria.Actinomycetales.Actinomycetales_noname.Tropheryma 0.31802115202 0.0393019864501
+Bacteria.Firmicutes.Bacilli.Lactobacillales.Streptococcaceae.Streptococcus.Streptococcus_cristatus 0.0 -
+Bacteria.Bacteroidetes.Bacteroidia.Bacteroidales.Porphyromonadaceae.Barnesiella.Barnesiella_intestinihominis 4.27421343713 HMP 3.30128419163 0.00082168329233
+Viruses.Viruses_noname.Viruses_noname.Viruses_noname.Geminiviridae.Mastrevirus.Wheat_dwarf_virus 1.47146951426 0.000133922718974
+Bacteria.Firmicutes.Clostridia.Clostridiales.Eubacteriaceae.Eubacterium.Eubacterium_limosum 0.290434993508 -
+Viruses.Viruses_noname.Viruses_noname.Caudovirales.Podoviridae.Epsilon15likevirus 0.0 -
+Viruses.Viruses_noname.Viruses_noname.Viruses_noname.Potyviridae.Potyvirus.Dasheen_mosaic_virus 1.22874245913 3.3122847922e-10
+Bacteria.Firmicutes.Bacilli.Lactobacillales.Streptococcaceae.Streptococcus.Streptococcus_mitis_oralis_pneumoniae 1.79941989257 7.37149838017e-05
+Bacteria.Firmicutes.Bacilli.Lactobacillales.Leuconostocaceae.Weissella.Weissella_confusa 2.65206360011 -
+Bacteria.Firmicutes.Bacilli.Lactobacillales.Streptococcaceae.Lactococcus.Lactococcus_lactis 1.97197294275 0.0132176293971
+Bacteria.Actinobacteria.Actinobacteria.Bifidobacteriales.Bifidobacteriaceae.Bifidobacterium.Bifidobacterium_animalis 1.91565028572 -
+Bacteria.Bacteroidetes.Bacteroidia.Bacteroidales.Porphyromonadaceae.Dysgonomonas.Dysgonomonas_unclassified 0.0 -
+Bacteria.Firmicutes.Clostridia.Clostridiales.Ruminococcaceae.Ruminococcus.Ruminococcus_callidus 2.76592356978 -
+Bacteria.Proteobacteria.Betaproteobacteria.Burkholderiales.Oxalobacteraceae.Oxalobacter 2.3101566993 0.00464058959143
+Bacteria.Firmicutes.Bacilli.Lactobacillales.Leuconostocaceae.Weissella.Weissella_unclassified 2.15926025092 0.00753961701125
+Bacteria.Proteobacteria.Betaproteobacteria.Neisseriales.Neisseriaceae.Chromobacterium 1.03943413674 0.00753961701125
+Bacteria.Proteobacteria.Gammaproteobacteria.Pseudomonadales 1.99275878423 0.00150196618482
+Bacteria.Firmicutes.Bacilli.Bacillales.Bacillales_noname.Gemella 0.644647428229 -
+Bacteria.Firmicutes.Clostridia.Clostridiales.Lachnospiraceae.Lachnospiraceae_noname.Lachnospiraceae_bacterium_3_1_46FAA 3.38472928516 -
+Bacteria.Proteobacteria.Betaproteobacteria.Burkholderiales.Burkholderiaceae.Burkholderia.Burkholderia_unclassified 1.79915250385 1.45594463342e-08
+Bacteria.Actinobacteria.Actinobacteria.Coriobacteriales.Coriobacteriaceae.Gordonibacter.Gordonibacter_pamelaeae 2.23482137852 -
+Bacteria.Spirochaetes.Spirochaetia.Spirochaetales.Spirochaetaceae 0.0 -
+Bacteria.Firmicutes.Clostridia.Clostridiales.Oscillospiraceae.Oscillibacter.Oscillibacter_unclassified 3.61025548341 MetaHIT 3.02033895046 6.90752584013e-05
+Bacteria.Firmicutes.Clostridia.Clostridiales.Lachnospiraceae.Coprococcus 4.24722106036 MetaHIT 3.82486798871 6.80501292398e-11
+Bacteria.Actinobacteria.Actinobacteria.Actinomycetales 1.82396795962 -
+Bacteria.Firmicutes.Clostridia.Clostridiales.Clostridiales_Family_XI_Incertae_Sedis.Anaerococcus.Anaerococcus_lactolyticus 0.0 -
+Viruses.Viruses_noname.Viruses_noname.Caudovirales.Siphoviridae.Siphoviridae_noname.Lactococcus_phage_ul36 1.15114268052 -
+Archaea.Euryarchaeota.Methanococci 1.26269072977 2.65110751199e-05
+Bacteria.Synergistetes.Synergistia.Synergistales.Synergistaceae.Synergistes 2.56788737627 -
+Bacteria.Firmicutes.Clostridia.Clostridiales.Lachnospiraceae.Dorea 3.88409387841 MetaHIT 3.39070313877 6.39040512029e-10
+Viruses.Viruses_noname.Viruses_noname.Caudovirales.Siphoviridae.C2likevirus.Lactococcus_phage_bIL67 2.0680358159 -
+Bacteria.Bacteroidetes.Bacteroidia.Bacteroidales.Bacteroidaceae.Bacteroides.Bacteroides_oleiciplenus 0.784898130719 -
+Bacteria.Bacteroidetes.Bacteroidia.Bacteroidales.Bacteroidaceae.Bacteroides.Bacteroides_massiliensis 4.60229906087 -
+Eukaryota.Ascomycota.Eurotiomycetes.Eurotiales.Aspergillaceae.Aspergillaceae_unclassified 0.0 -
+Bacteria.Proteobacteria.Epsilonproteobacteria.Campylobacterales.Helicobacteraceae.Helicobacter 0.164481237659 -
+Bacteria.Proteobacteria.Alphaproteobacteria.Rhizobiales.Bradyrhizobiaceae.Afipia.Afipia_broomeae 0.0411085539856 -
+Bacteria.Bacteroidetes.Bacteroidia.Bacteroidales.Prevotellaceae.Paraprevotella.Paraprevotella_xylaniphila 3.49841150822 MetaHIT 3.12024404155 0.000425958703305
+Bacteria.Bacteroidetes.Bacteroidia.Bacteroidales.Rikenellaceae.Alistipes.Alistipes_senegalensis 2.85708017923 0.000140632036079
+Bacteria.Firmicutes.Bacilli.Lactobacillales.Carnobacteriaceae.Granulicatella 1.21237595819 -
+Viruses.Viruses_noname.Viruses_noname.Caudovirales.Siphoviridae.Siphoviridae_noname.Propionibacterium_phage_P100_A 0.269109605919 -
+Bacteria.Proteobacteria.Betaproteobacteria.Burkholderiales.Burkholderiaceae.Burkholderia 1.79915250385 1.45594463342e-08
+Bacteria.Firmicutes.Clostridia.Clostridiales.Ruminococcaceae.Ruminococcus.Ruminococcus_lactaris 3.6302177297 MetaHIT 3.14644501941 6.46222943104e-07
+Bacteria.Proteobacteria.Gammaproteobacteria.Enterobacteriales.Enterobacteriaceae.Raoultella 0.0 -
+Bacteria.Fusobacteria.Fusobacteriia.Fusobacteriales.Fusobacteriaceae.Fusobacterium.Fusobacterium_necrophorum 0.0 -
+Bacteria.Spirochaetes 1.64634432136 -
+Bacteria.Proteobacteria.Betaproteobacteria.Burkholderiales.Comamonadaceae 1.20660783883 1.718953802e-07
+Eukaryota.Ascomycota.Saccharomycetes.Saccharomycetales.Saccharomycetaceae.Saccharomyces.Saccharomyces_cerevisiae 0.953022254349 4.31042940631e-07
+Bacteria.Firmicutes.Clostridia.Clostridiales.Clostridiales_Family_XI_Incertae_Sedis.Peptoniphilus.Peptoniphilus_lacrimalis 0.365245505258 -
+Bacteria.Actinobacteria.Actinobacteria.Bifidobacteriales.Bifidobacteriaceae.Bifidobacterium 4.05503501514 MetaHIT 3.65231622023 6.03758421618e-09
+Bacteria.Proteobacteria.Epsilonproteobacteria.Campylobacterales.Helicobacteraceae 0.164481237659 -
+Bacteria.Bacteroidetes.Bacteroidia.Bacteroidales.Marinilabiliaceae 0.0 -
+Bacteria.Proteobacteria.Gammaproteobacteria.Pasteurellales.Pasteurellaceae.Haemophilus.Haemophilus_parainfluenzae 3.14325427357 -
+Bacteria.Firmicutes.Negativicutes.Selenomonadales.Veillonellaceae.Megamonas 2.45460005233 -
+Bacteria.Aquificae.Aquificae.Aquificales.Desulfurobacteriaceae 0.218943758973 -
+Bacteria.Bacteroidetes.Flavobacteriia.Flavobacteriales.Flavobacteriaceae.Cellulophaga 2.1583868623 9.96323735481e-14
+Bacteria.Bacteroidetes.Bacteroidia.Bacteroidales.Bacteroidaceae.Bacteroides.Bacteroides_intestinalis 3.67961608187 -
+Viruses.Viruses_noname.Viruses_noname.Viruses_noname.Retroviridae.Retroviridae_noname.Avian_endogenous_retrovirus_EAV_HP 0.421337978005 -
+Bacteria.Proteobacteria.Gammaproteobacteria.Aeromonadales.Succinivibrionaceae.Succinatimonas 1.88235204258 0.00753961701125
+Bacteria.Proteobacteria.Alphaproteobacteria.Caulobacterales.Caulobacteraceae.Caulobacter 0.0 -
+Bacteria.Bacteroidetes.Bacteroidia.Bacteroidales.Porphyromonadaceae.Parabacteroides.Parabacteroides_goldsteinii 2.76002169293 -
+Bacteria.Bacteroidetes.Bacteroidia.Bacteroidales.Rikenellaceae.Alistipes.Alistipes_sp_AP11 3.24431785651 -
+Viruses.Viruses_noname.Viruses_noname.Viruses_noname.Circoviridae.Gyrovirus.Chicken_anemia_virus 0.917171241493 -
+Bacteria.Firmicutes.Negativicutes.Selenomonadales.Veillonellaceae.Dialister.Dialister_succinatiphilus 3.13943604663 1.25580031008e-06
+Bacteria.Proteobacteria.Gammaproteobacteria.Enterobacteriales.Enterobacteriaceae.Proteus.Proteus_penneri 0.219473386456 -
+Bacteria.Proteobacteria.Gammaproteobacteria.Chromatiales.Ectothiorhodospiraceae.Spiribacter 0.429572832624 -
+Bacteria.Bacteroidetes.Bacteroidia.Bacteroidales.Bacteroidaceae.Bacteroides.Bacteroides_salyersiae 3.51977031559 -
+Bacteria.Firmicutes.Erysipelotrichia.Erysipelotrichales.Erysipelotrichaceae.Solobacterium 0.963210104643 -
+Bacteria.Proteobacteria.Betaproteobacteria.Burkholderiales.Burkholderiaceae.Lautropia.Lautropia_mirabilis 0.0706907307645 -
+Bacteria.Proteobacteria.Gammaproteobacteria.Oceanospirillales.Halomonadaceae 0.0 -
+Bacteria.Actinobacteria.Actinobacteria.Bifidobacteriales.Bifidobacteriaceae.Bifidobacterium.Bifidobacterium_angulatum 1.61654446179 -
+Bacteria.Firmicutes.Clostridia.Clostridiales.Ruminococcaceae 5.27312325351 MetaHIT 4.70503804248 2.60705887634e-10
+Bacteria.Bacteroidetes.Bacteroidia.Bacteroidales.Prevotellaceae.Prevotella.Prevotella_oris 0.605228841712 -
+Bacteria.Actinobacteria.Actinobacteria.Coriobacteriales.Coriobacteriaceae.Adlercreutzia.Adlercreutzia_equolifaciens 2.82846523493 0.0015524586863
+Viruses.Viruses_noname.Viruses_noname.Caudovirales.Siphoviridae.Siphoviridae_noname.Lactococcus_phage_jm2 2.86090822846 0.00335428910734
+Bacteria.Bacteroidetes.Bacteroidia.Bacteroidales.Bacteroidaceae.Bacteroides.Bacteroides_stercoris 4.69217028809 HMP 4.33308790044 7.52727492882e-06
+Bacteria.Firmicutes.Bacilli.Lactobacillales.Lactobacillaceae.Lactobacillus 3.30541412791 0.000146440360391
+Bacteria.Actinobacteria.Actinobacteria.Coriobacteriales.Coriobacteriaceae.Eggerthella.Eggerthella_unclassified 2.06720615542 -
+Bacteria.Firmicutes.Negativicutes.Selenomonadales.Veillonellaceae.Megasphaera.Megasphaera_micronuciformis 1.28284534482 -
+Viruses.Viruses_noname.Viruses_noname.Caudovirales.Siphoviridae.Siphoviridae_noname.Streptococcus_phage_ALQ13_2 1.23389049067 -
+Bacteria.Firmicutes.Clostridia.Clostridiales.Peptostreptococcaceae 2.7974640984 2.75278855128e-07
+Bacteria.Firmicutes.Bacilli.Bacillales.Bacillales_noname.Gemella.Gemella_sanguinis 0.103975898987 -
+Bacteria.Firmicutes.Clostridia.Clostridiales.Clostridiaceae.Clostridiaceae_noname.Clostridiaceae_bacterium_JC118 1.86238023163 0.000978701988827
+Bacteria.Verrucomicrobia 4.0546495379 -
+Eukaryota.Ascomycota 1.22082102584 1.27154008273e-08
+Bacteria.Tenericutes.Mollicutes.Acholeplasmatales 0.0 -
+Bacteria.Proteobacteria.Gammaproteobacteria.Enterobacteriales.Enterobacteriaceae.Candidatus_Moranella.Candidatus_Moranella_endobia 0.0 -
+Eukaryota.Ascomycota.Saccharomycetes 1.20783286295 3.04550724598e-08
+Bacteria.Fusobacteria.Fusobacteriia.Fusobacteriales.Fusobacteriaceae.Fusobacterium.Fusobacterium_ulcerans 1.35745495597 -
+Bacteria.Firmicutes.Clostridia.Clostridiales.Lachnospiraceae.Roseburia.Roseburia_intestinalis 4.09102967478 -
+Viruses.Viruses_noname.Viruses_noname.Viruses_noname.Adenoviridae.Mastadenovirus 2.05495334402 6.15148251338e-09
+Bacteria.Firmicutes.Clostridia.Clostridiales.Lachnospiraceae.Butyrivibrio.Butyrivibrio_unclassified 2.6937029713 1.12152878223e-18
+Bacteria.Actinobacteria.Actinobacteria.Coriobacteriales.Coriobacteriaceae.Coriobacteriaceae_noname 2.10269006954 0.00106909347748
+Bacteria.Bacteroidetes.Bacteroidia.Bacteroidales.Bacteroidaceae.Bacteroides.Bacteroides_caccae 4.5680998729 HMP 4.12172603357 0.00136525335061
+Bacteria.Firmicutes.Clostridia.Clostridiales.Lachnospiraceae.Marvinbryantia.Marvinbryantia_formatexigens 0.0216354156802 -
+Eukaryota.Ascomycota.Saccharomycetes.Saccharomycetales.Saccharomycetaceae.Saccharomyces 0.953022254349 4.31042940631e-07
+Bacteria.Firmicutes.Clostridia.Clostridiales.Lachnospiraceae.Coprococcus.Coprococcus_sp_ART55_1 4.00978536225 MetaHIT 3.60808199421 0.000780615434675
+Bacteria.Proteobacteria.Gammaproteobacteria.Enterobacteriales.Enterobacteriaceae.Enterobacteriaceae_noname.Enterobacteriaceae_bacterium_9_2_54FAA 0.0 -
+Bacteria.Proteobacteria.Betaproteobacteria.Neisseriales.Neisseriaceae.Neisseria 0.0 -
+Bacteria.Actinobacteria.Actinobacteria.Actinomycetales.Actinomycetales_noname 0.31802115202 MetaHIT 3.18523735106 0.0393019864501
+Bacteria.Firmicutes.Bacilli.Lactobacillales.Lactobacillaceae.Lactobacillus.Lactobacillus_animalis 0.0 -
+Bacteria.Firmicutes.Negativicutes.Selenomonadales.Acidaminococcaceae.Acidaminococcaceae_unclassified 2.5508519334 3.19120318838e-10
+Bacteria.Verrucomicrobia.Verrucomicrobiae.Verrucomicrobiales.Verrucomicrobiaceae 4.0546495379 -
+Bacteria.Proteobacteria.Betaproteobacteria.Neisseriales.Neisseriaceae.Chromobacterium.Chromobacterium_unclassified 1.03943413674 0.00753961701125
+Bacteria.Proteobacteria 4.31675383979 MetaHIT 3.56293810874 0.000952823879658
+Bacteria.Bacteroidetes.Bacteroidia.Bacteroidales.Bacteroidaceae.Bacteroides.Bacteroides_vulgatus 4.79010773463 HMP 4.31812737253 6.45835712709e-06
+Bacteria.Bacteroidetes.Bacteroidia.Bacteroidales.Bacteroidaceae.Bacteroides.Bacteroides_nordii 2.5426490267 -
+Bacteria.Firmicutes.Clostridia.Clostridiales.Eubacteriaceae.Anaerofustis.Anaerofustis_stercorihominis 0.605793204705 HMP 3.12729371345 0.0237387429618
+Bacteria.Bacteroidetes.Bacteroidia.Bacteroidales.Bacteroidaceae 5.70641157728 HMP 5.23759140087 2.65577079381e-25
+Bacteria.Firmicutes.Clostridia.Clostridiales.Peptostreptococcaceae.Peptostreptococcus.Peptostreptococcus_stomatis 0.680051471112 -
+Bacteria.Firmicutes.Bacilli.Bacillales.Bacillales_noname.Gemella.Gemella_morbillorum 0.272959611122 -
+Bacteria.Firmicutes.Bacilli.Lactobacillales.Carnobacteriaceae.Granulicatella.Granulicatella_unclassified 1.15839295849 -
+Bacteria.Firmicutes.Erysipelotrichia.Erysipelotrichales.Erysipelotrichaceae.Coprobacillus.Coprobacillus_sp_D6 1.55631464276 -
+Bacteria.Firmicutes.Clostridia.Clostridiales.Clostridiaceae.Clostridiaceae_noname 1.86238023163 0.000978701988827
+Viruses.Viruses_noname.Viruses_noname.Viruses_noname.Adenoviridae.Mastadenovirus.Human_adenovirus_D 0.631525756199 5.17332259128e-06
+Bacteria.Proteobacteria.Alphaproteobacteria.Rhizobiales.Bradyrhizobiaceae 0.568708091573 -
+Bacteria.Acidobacteria.Acidobacteriia.Acidobacteriales 1.83195376059 1.31015343009e-16
+Bacteria.Proteobacteria.Betaproteobacteria.Burkholderiales.Alcaligenaceae 0.169015021337 -
+Bacteria.Firmicutes.Clostridia.Clostridiales.Lachnospiraceae.Anaerostipes.Anaerostipes_caccae 0.0 -
+Bacteria.Bacteroidetes.Bacteroidia.Bacteroidales.Rikenellaceae.Alistipes.Alistipes_putredinis 4.68088336294 HMP 3.93143068889 0.0208995278737
+Bacteria.Bacteroidetes.Bacteroidia.Bacteroidales.Prevotellaceae.Prevotella.Prevotella_copri 4.81763707513 -
+Bacteria.Bacteroidetes.Bacteroidia.Bacteroidales.Prevotellaceae.Prevotella.Prevotella_multisaccharivorax 0.0 -
+Bacteria.Proteobacteria.Gammaproteobacteria.Enterobacteriales.Enterobacteriaceae.Enterobacter.Enterobacter_cancerogenus 0.657770296067 -
+Bacteria.Bacteroidetes.Bacteroidia.Bacteroidales.Rikenellaceae.Alistipes.Alistipes_indistinctus 3.06792781917 -
+Bacteria.Firmicutes.Erysipelotrichia.Erysipelotrichales.Erysipelotrichaceae.Holdemania.Holdemania_sp_AP2 1.34949415585 -
+Bacteria.Tenericutes.Mollicutes.Mycoplasmatales.Mycoplasmataceae 0.598924277475 -
+Viruses.Viruses_noname.Viruses_noname.Viruses_noname.Togaviridae.Alphavirus 0.0 -
+Bacteria.Proteobacteria.Gammaproteobacteria.Pasteurellales.Pasteurellaceae.Haemophilus 3.14453080944 -
+Bacteria.Proteobacteria.Betaproteobacteria.Burkholderiales.Sutterellaceae.Parasutterella.Parasutterella_excrementihominis 2.92127334193 -
+Bacteria.Bacteroidetes.Bacteroidetes_noname.Bacteroidetes_noname.Bacteroidetes_noname.Bacteroidetes_noname.Bacteroidetes_bacterium_oral_taxon_272 0.0 -
+Bacteria.Actinobacteria.Actinobacteria.Bifidobacteriales.Bifidobacteriaceae.Scardovia.Scardovia_wiggsiae 0.0 -
+Bacteria.Bacteroidetes.Bacteroidetes_noname.Bacteroidetes_noname.Bacteroidetes_noname.Bacteroidetes_noname 0.0 -
+Viruses.Viruses_noname.Viruses_noname.Nidovirales 0.0 -
+Bacteria.Firmicutes.Clostridia.Clostridiales.Clostridiales_Family_XI_Incertae_Sedis.Clostridiales_Family_XI_Incertae_Sedis_noname.Clostridiales_bacterium_BV3C26 0.0 -
+Bacteria.Firmicutes.Clostridia 5.5996985302 MetaHIT 5.01000918986 7.34410188106e-11
+Bacteria.Actinobacteria.Actinobacteria.Coriobacteriales.Coriobacteriaceae.Coriobacteriaceae_noname.Coriobacteriaceae_bacterium_phI 2.10269006954 0.00106909347748
+Bacteria.Proteobacteria.Gammaproteobacteria.Enterobacteriales.Enterobacteriaceae.Yersinia.Yersinia_unclassified 0.0 MetaHIT 3.5610007631 0.0393019864501
+Bacteria.Bacteroidetes.Bacteroidia.Bacteroidales 5.87166403271 HMP 5.28185623127 3.96193321158e-25
+Viruses.Viruses_noname.Viruses_noname.Caudovirales.Myoviridae.P2likeviruses 0.240979989188 -
+Viruses.Viruses_noname.Viruses_noname.Caudovirales.Siphoviridae.Siphoviridae_noname.Lactococcus_phage_P680 2.48075148835 0.000299836845276
+Bacteria.Bacteroidetes.Bacteroidia.Bacteroidales.Rikenellaceae.Alistipes.Alistipes_unclassified 3.69523298777 MetaHIT 3.35283313704 0.00194652585795
+Archaea.Euryarchaeota.Methanobacteria.Methanobacteriales.Methanobacteriaceae.Methanosphaera.Methanosphaera_stadtmanae 1.42896174455 0.0161479053958
+Bacteria.Proteobacteria.Betaproteobacteria.Burkholderiales.Burkholderiales_noname.Burkholderiales_noname.Burkholderiales_bacterium_1_1_47 3.15608154377 -
+Viruses.Viruses_noname.Viruses_noname.Caudovirales.Siphoviridae.Siphoviridae_noname.Lactococcus_phage_bIL285 1.10530184009 -
+Bacteria.Proteobacteria.Betaproteobacteria.Burkholderiales.Alcaligenaceae.Bordetella 0.169015021337 -
+Bacteria.Firmicutes.Clostridia.Clostridiales.Ruminococcaceae.Faecalibacterium.Faecalibacterium_prausnitzii 4.75439738268 MetaHIT 4.18635345017 1.30338927546e-09
+Bacteria.Tenericutes.Mollicutes.Acholeplasmatales.Acholeplasmataceae 0.0 -
+Bacteria.Firmicutes.Bacilli.Lactobacillales.Streptococcaceae.Streptococcus.Streptococcus_tigurinus 0.0304893221479 -
+Bacteria.Bacteroidetes.Sphingobacteriia.Sphingobacteriales.Sphingobacteriaceae 2.07193033385 2.47589575774e-14
+Bacteria.Firmicutes.Bacilli.Lactobacillales.Lactobacillaceae.Lactobacillus.Lactobacillus_fructivorans 0.0 -
+Bacteria.Firmicutes.Clostridia.Clostridiales.Clostridiaceae.Clostridium.Clostridium_sp_L2_50 3.72369144504 MetaHIT 3.10211575047 0.00351594851619
+Bacteria.Firmicutes.Clostridia.Clostridiales.Lachnospiraceae.Roseburia.Roseburia_unclassified 3.26762060773 -
+Bacteria.Firmicutes.Clostridia.Clostridiales.Lachnospiraceae.Oribacterium.Oribacterium_sinus 0.00739427595607 -
+Bacteria.Firmicutes.Clostridia.Clostridiales.Eubacteriaceae.Eubacterium.Eubacterium_ramulus 2.99286757636 0.00135055405182
+Bacteria.Deinococcus_Thermus 2.27354372855 4.35362749418e-29
+Bacteria.Firmicutes.Negativicutes.Selenomonadales.Acidaminococcaceae 4.00873716942 MetaHIT 3.558855819 3.86918818505e-11
+Bacteria.Actinobacteria.Actinobacteria.Actinomycetales.Corynebacteriaceae.Corynebacterium.Corynebacterium_aurimucosum 0.0 -
+Bacteria.Firmicutes.Clostridia.Clostridiales.Lachnospiraceae.Roseburia 4.42469525608 MetaHIT 3.84276012114 0.000112873940024
+Bacteria.Firmicutes.Clostridia.Clostridiales.Clostridiaceae.Clostridium.Clostridium_perfringens 0.50680666297 -
+Bacteria.Actinobacteria.Actinobacteria.Actinomycetales.Actinomycetaceae.Actinomyces 0.927660649411 -
+Bacteria.Proteobacteria.Betaproteobacteria.Gallionellales.Gallionellaceae 2.18292452053 4.31042940631e-07
+Bacteria.Fusobacteria.Fusobacteriia.Fusobacteriales.Leptotrichiaceae 0.612034238114 -
+Bacteria.Firmicutes.Clostridia.Clostridiales.Lachnospiraceae.Lachnospiraceae_noname.Lachnospiraceae_bacterium_5_1_63FAA 2.69012176333 1.95447867161e-08
+Bacteria.Proteobacteria.Betaproteobacteria.Burkholderiales.Burkholderiaceae.Cupriavidus.Cupriavidus_unclassified 0.362870734223 MetaHIT 3.05540810122 0.0393019864501
+Bacteria.Proteobacteria.Deltaproteobacteria.Desulfovibrionales.Desulfovibrionaceae.Bilophila.Bilophila_unclassified 3.31610955311 2.73610316202e-05
+Viruses.Viruses_noname.Viruses_noname.Viruses_noname.Togaviridae.Alphavirus.Venezuelan_equine_encephalitis_virus 0.0 -
+Bacteria.Firmicutes.Clostridia.Clostridiales.Clostridiaceae.Clostridium.Clostridium_asparagiforme 1.84749164076 -
+Bacteria.Firmicutes.Negativicutes.Selenomonadales.Veillonellaceae.Mitsuokella.Mitsuokella_multacida 2.88050872419 0.00234357989658
+Bacteria.Proteobacteria.Alphaproteobacteria 1.31280115788 0.000844704079352
+Bacteria.Actinobacteria.Actinobacteria.Coriobacteriales.Coriobacteriaceae.Collinsella 3.48152195822 2.82897211493e-06
+Bacteria.Actinobacteria.Actinobacteria.Bifidobacteriales.Bifidobacteriaceae.Bifidobacterium.Bifidobacterium_breve 1.30697709 -
+Viruses.Viruses_noname.Viruses_noname.Caudovirales.Siphoviridae.Lambdalikevirus 1.08535185231 -
+Bacteria.Firmicutes.Clostridia.Clostridiales.Lachnospiraceae.Coprococcus.Coprococcus_catus 3.15346254548 2.31707321194e-13
+Bacteria.Firmicutes.Clostridia.Clostridiales.Lachnospiraceae.Roseburia.Roseburia_hominis 3.54080822011 MetaHIT 3.0210061774 9.76386322289e-06
+Bacteria.Proteobacteria.Betaproteobacteria.Neisseriales.Neisseriaceae.Kingella.Kingella_unclassified 0.0 -
+Bacteria.Firmicutes.Bacilli.Lactobacillales.Lactobacillaceae.Lactobacillus.Lactobacillus_gastricus 0.0 -
+Bacteria.Synergistetes.Synergistia.Synergistales.Synergistaceae.Pyramidobacter.Pyramidobacter_piscolens 0.431201226195 -
+Bacteria.Firmicutes.Negativicutes.Selenomonadales.Veillonellaceae.Veillonella.Veillonella_unclassified 2.97547869146 -
+Bacteria.Proteobacteria.Betaproteobacteria 3.9832884386 -
+Bacteria.Spirochaetes.Spirochaetia.Spirochaetales.Brachyspiraceae.Brachyspira 1.64141402746 -
+Eukaryota.Ascomycota.Saccharomycetes.Saccharomycetales.Saccharomycetales_noname.Candida 0.0 -
+Bacteria.Firmicutes.Clostridia.Clostridiales.Lachnospiraceae.Butyrivibrio 4.5350137534 MetaHIT 4.11265355922 3.0087672585e-26
+Bacteria.Proteobacteria.Alphaproteobacteria.Caulobacterales.Caulobacteraceae 0.333559212452 MetaHIT 3.4055340857 0.0393019864501
+Bacteria.Firmicutes.Erysipelotrichia.Erysipelotrichales.Erysipelotrichaceae.Erysipelotrichaceae_noname.Eubacterium_biforme 3.39229591329 MetaHIT 3.0516087859 1.4828301387e-06
+Bacteria.Actinobacteria.Actinobacteria.Bifidobacteriales.Bifidobacteriaceae.Bifidobacterium.Bifidobacterium_bifidum 2.42662790498 0.0288998664303
+Bacteria.Bacteroidetes.Bacteroidia.Bacteroidales.Bacteroidaceae.Bacteroides.Bacteroides_thetaiotaomicron 4.34757192425 HMP 3.9450298065 0.00012033660404
+Archaea 3.52774078942 MetaHIT 3.22229277303 2.37509692531e-05
+Bacteria.Deinococcus_Thermus.Deinococci.Deinococcales.Deinococcaceae 2.27354372855 4.35362749418e-29
+Bacteria.Bacteroidetes.Bacteroidia.Bacteroidales.Porphyromonadaceae.Coprobacter 2.61748325074 2.44740958868e-05
+Bacteria.Firmicutes.Clostridia.Clostridiales.Clostridiales_Family_XI_Incertae_Sedis.Peptoniphilus.Peptoniphilus_harei 0.0 -
+Bacteria.Firmicutes.Clostridia.Clostridiales.Clostridiales_Family_XI_Incertae_Sedis.Parvimonas.Parvimonas_micra 0.729213849602 -
+Bacteria.Firmicutes.Clostridia.Clostridiales.Clostridiales_noname.Flavonifractor.Flavonifractor_plautii 2.35110499307 -
+Bacteria.Bacteroidetes.Bacteroidia.Bacteroidales.Prevotellaceae.Alloprevotella 1.38434074263 0.000488226068956
+Bacteria.Fusobacteria.Fusobacteriia.Fusobacteriales.Leptotrichiaceae.Leptotrichia.Leptotrichia_unclassified 0.0 -
+Bacteria.Firmicutes 5.64777798493 MetaHIT 5.05762090728 1.49449846968e-11
+Bacteria.Firmicutes.Clostridia.Clostridiales.Eubacteriaceae.Eubacterium.Eubacterium_sp_3_1_31 2.53011305371 5.21761760356e-09
+Bacteria.Actinobacteria.Actinobacteria.Bifidobacteriales.Bifidobacteriaceae.Alloscardovia.Alloscardovia_omnicolens 0.0 -
+Bacteria.Actinobacteria.Actinobacteria.Coriobacteriales.Coriobacteriaceae.Slackia.Slackia_piriformis 1.15438400732 -
+Bacteria.Firmicutes.Clostridia.Clostridiales.Oscillospiraceae 3.69234004597 MetaHIT 3.11432587593 0.000151042572789
+Bacteria.Firmicutes.Clostridia.Clostridiales.Lachnospiraceae.Blautia 4.25922868724 MetaHIT 3.52032448757 2.33523630436e-07
+Bacteria.Firmicutes.Clostridia.Clostridiales.Lachnospiraceae.Roseburia.Roseburia_inulinivorans 3.95089768268 MetaHIT 3.340591613 0.0102434816648
+Bacteria.Proteobacteria.Alphaproteobacteria.Rhizobiales.Bradyrhizobiaceae.Afipia.Afipia_unclassified 0.37046915645 -
+Bacteria.Firmicutes.Negativicutes.Selenomonadales.Veillonellaceae.Dialister 4.33561216742 -
+Bacteria.Firmicutes.Bacilli.Lactobacillales.Lactobacillaceae.Lactobacillus.Lactobacillus_crispatus 0.188614917376 -
+Bacteria.Firmicutes.Clostridia.Clostridiales.Clostridiales_Family_XI_Incertae_Sedis.Anaerococcus.Anaerococcus_vaginalis 0.0 -
+Bacteria.Firmicutes.Clostridia.Clostridiales.Eubacteriaceae.Eubacterium.Eubacterium_hallii 3.6027907633 MetaHIT 3.2346524746 9.23043654333e-15
+Bacteria.Spirochaetes.Spirochaetia.Spirochaetales.Brachyspiraceae.Brachyspira.Brachyspira_unclassified 1.64141402746 -
+Bacteria.Proteobacteria.Gammaproteobacteria.Alteromonadales.Pseudoalteromonadaceae.Pseudoalteromonadaceae_unclassified 0.807548737367 -
+Bacteria.Firmicutes.Clostridia.Clostridiales.Lachnospiraceae 5.04753825792 MetaHIT 4.53260157665 4.69994607341e-10
+Bacteria.Bacteroidetes.Bacteroidia.Bacteroidales.Porphyromonadaceae.Parabacteroides 4.83253968578 HMP 4.27098784243 4.77495679558e-08
+Bacteria.Proteobacteria.Gammaproteobacteria.Alteromonadales 0.807548737367 -
+Bacteria.Bacteroidetes.Bacteroidia.Bacteroidales.Porphyromonadaceae.Dysgonomonas 0.0 -
+Bacteria.Firmicutes.Negativicutes 4.56824359495 MetaHIT 3.91815223946 0.0015435879065
+Eukaryota.Ascomycota.Saccharomycetes.Saccharomycetales.Saccharomycetaceae.Naumovozyma.Naumovozyma_unclassified 0.350717797362 MetaHIT 3.34951951407 0.00335428910734
+Bacteria.Proteobacteria.Gammaproteobacteria.Xanthomonadales.Sinobacteraceae 1.23550293447 2.4451552887e-05
+Bacteria.Bacteroidetes.Bacteroidia.Bacteroidales.Bacteroidaceae.Bacteroides.Bacteroides_clarus 3.13633582665 -
+Bacteria.Firmicutes.Bacilli.Lactobacillales.Streptococcaceae.Streptococcus.Streptococcus_australis 1.63431438935 -
+Bacteria.Proteobacteria.Gammaproteobacteria.Pasteurellales 3.15418412357 -
+Bacteria.Firmicutes.Negativicutes.Selenomonadales.Acidaminococcaceae.Phascolarctobacterium.Phascolarctobacterium_succinatutens 3.86194875774 MetaHIT 3.46668862029 0.000442957618486
+Bacteria.Aquificae.Aquificae 0.218943758973 -
+Bacteria.Chlamydiae.Chlamydiia.Chlamydiales.Chlamydiaceae 0.0 -
+Bacteria.Firmicutes.Clostridia.Halanaerobiales 1.02314849428 0.00149836161228
+Viruses.Viruses_noname.Viruses_noname.Viruses_noname.Papillomaviridae.Alphapapillomavirus 1.2078871788 -
+Bacteria.Bacteroidetes.Flavobacteriia 2.164560128 9.77374156167e-14
+Bacteria.Proteobacteria.Gammaproteobacteria.Pasteurellales.Pasteurellaceae.Pasteurella.Pasteurella_unclassified 0.189623570699 -
+Bacteria.Deinococcus_Thermus.Deinococci.Deinococcales.Deinococcaceae.Deinococcus.Deinococcus_unclassified 2.27354372855 4.35362749418e-29
+Bacteria.Firmicutes.Erysipelotrichia.Erysipelotrichales 3.63467366361 MetaHIT 3.08509440974 9.82038079913e-05
+Bacteria.Bacteroidetes.Bacteroidia.Bacteroidales.Bacteroidaceae.Bacteroides.Bacteroides_uniformis 4.85035603421 HMP 4.31969490601 2.53945541248e-06
+Bacteria.Firmicutes.Clostridia.Clostridiales.Clostridiales_Family_XIII_Incertae_Sedis.Clostridiales_Family_XIII_Incertae_Sedis_noname.Eubacterium_infirmum 0.686224627887 0.00702404765416
+Bacteria.Actinobacteria.Actinobacteria.Actinomycetales.Actinomycetaceae 0.927660649411 -
+Bacteria.Firmicutes.Bacilli.Bacillales.Staphylococcaceae.Staphylococcus 0.0 -
+Bacteria.Aquificae.Aquificae.Aquificales 0.218943758973 -
+Bacteria.Actinobacteria.Actinobacteria.Bifidobacteriales 4.05530271663 MetaHIT 3.65227518447 4.49674238249e-09
+Bacteria.Firmicutes.Clostridia.Clostridiales.Clostridiales_Family_XI_Incertae_Sedis 1.38214439915 0.0181098576269
+Bacteria.Actinobacteria.Actinobacteria.Coriobacteriales.Coriobacteriaceae.Atopobium 0.722700366625 -
+Bacteria.Firmicutes.Clostridia.Clostridiales.Lachnospiraceae.Dorea.Dorea_unclassified 2.06004887032 -
+Bacteria.Proteobacteria.Gammaproteobacteria.Pseudomonadales.Moraxellaceae.Acinetobacter 1.87434127294 -
+Bacteria.Proteobacteria.Deltaproteobacteria.Desulfovibrionales.Desulfovibrionaceae.Desulfovibrio 2.99622944823 1.62813248825e-11
+Bacteria.Firmicutes.Negativicutes.Selenomonadales.Veillonellaceae 4.42814058543 MetaHIT 3.68178609327 0.0133498321481
+Bacteria.Firmicutes.Erysipelotrichia.Erysipelotrichales.Erysipelotrichaceae.Coprobacillus.Coprobacillus_unclassified 1.94353448503 -
+Bacteria.Actinobacteria.Actinobacteria.Bifidobacteriales.Bifidobacteriaceae.Gardnerella 0.7823488671 -
+Bacteria.Proteobacteria.Gammaproteobacteria.Aeromonadales.Succinivibrionaceae.Succinatimonas.Succinatimonas_hippei 1.88235204258 0.00753961701125
+Bacteria.Firmicutes.Bacilli.Lactobacillales.Lactobacillaceae.Lactobacillus.Lactobacillus_sanfranciscensis 0.0 -
+Bacteria.Firmicutes.Clostridia.Clostridiales.Eubacteriaceae.Eubacterium 4.91855554433 MetaHIT 4.1363159784 0.000308605880108
+Bacteria.Bacteroidetes.Sphingobacteriia.Sphingobacteriales.Sphingobacteriaceae.Pedobacter 2.06362520946 4.43333963816e-13
+Bacteria.Actinobacteria.Actinobacteria.Coriobacteriales.Coriobacteriaceae.Olsenella.Olsenella_unclassified 1.83225078412 3.47665895139e-29
+Bacteria.Proteobacteria.Gammaproteobacteria.Oceanospirillales.Halomonadaceae.Halomonas.Halomonas_unclassified 0.0 -
+Bacteria.Firmicutes.Clostridia.Clostridiales.Clostridiales_Family_XIII_Incertae_Sedis.Clostridiales_Family_XIII_Incertae_Sedis_unclassified 0.997870180012 -
+Bacteria.Proteobacteria.Gammaproteobacteria.Enterobacteriales.Enterobacteriaceae.Enterobacter 1.78065910412 -
+Viruses.Viruses_noname.Viruses_noname.Caudovirales.Myoviridae.PhiCD119likevirus 0.0 -
+Bacteria.Proteobacteria.Deltaproteobacteria 3.53294871718 MetaHIT 3.16077739224 5.80955203023e-10
+Bacteria.Firmicutes.Bacilli.Lactobacillales.Streptococcaceae.Streptococcus.Streptococcus_constellatus 0.0 -
+Eukaryota.Ascomycota.Saccharomycetes.Saccharomycetales.Saccharomycetales_noname.Candida.Candida_tropicalis 0.0 -
+Bacteria.Proteobacteria.Gammaproteobacteria.Oceanospirillales.Hahellaceae 0.0 -
+Bacteria.Bacteroidetes.Bacteroidia.Bacteroidales.Prevotellaceae.Alloprevotella.Alloprevotella_unclassified 1.38434074263 0.000488226068956
+Bacteria.Firmicutes.Erysipelotrichia.Erysipelotrichales.Erysipelotrichaceae.Coprobacillus.Coprobacillus_sp_29_1 2.13667495278 -
+Bacteria.Firmicutes.Clostridia.Clostridiales.Clostridiales_Family_XI_Incertae_Sedis.Anaerococcus.Anaerococcus_obesiensis 0.0 -
+Bacteria.Actinobacteria.Actinobacteria.Coriobacteriales 3.62888316838 MetaHIT 3.17761346291 6.7747022094e-09
+Bacteria.Firmicutes.Bacilli.Lactobacillales.Lactobacillaceae.Lactobacillus.Lactobacillus_rhamnosus 0.0 -
+Bacteria.Synergistetes.Synergistia.Synergistales.Synergistaceae.Pyramidobacter 0.431201226195 -
+Eukaryota.Ascomycota.Saccharomycetes.Saccharomycetales.Saccharomycetaceae.Saccharomycetaceae_unclassified 0.692161196847 MetaHIT 3.49705355848 0.00149836161228
+Bacteria.Firmicutes.Bacilli.Lactobacillales.Streptococcaceae.Streptococcus.Streptococcus_anginosus 1.85905941244 -
+Bacteria.Candidatus_Saccharibacteria.Candidatus_Saccharibacteria_noname.Candidatus_Saccharibacteria_noname 0.179005983218 -
+Bacteria.Proteobacteria.Gammaproteobacteria.Pasteurellales.Pasteurellaceae.Aggregatibacter 1.16142850579 0.00329091026373
+Viruses.Viruses_noname.Viruses_noname.Viruses_noname 2.58846072149 3.2289869112e-17
+Bacteria.Proteobacteria.Betaproteobacteria.Burkholderiales.Sutterellaceae.Sutterella.Sutterella_wadsworthensis 3.84045514787 -
+Bacteria.Bacteroidetes.Bacteroidia.Bacteroidales.Bacteroidaceae.Bacteroides.Bacteroides_xylanisolvens 4.0855775592 HMP 3.74319995601 0.000248388848105
+Bacteria.Firmicutes.Clostridia.Clostridiales.Clostridiaceae 3.93673500255 -
+Bacteria.Bacteroidetes.Bacteroidia.Bacteroidales.Bacteroidaceae.Bacteroides.Bacteroides_gallinarum 2.3734491769 -
+Bacteria.Firmicutes.Negativicutes.Selenomonadales.Veillonellaceae.Megamonas.Megamonas_funiformis 1.72225156798 -
+Bacteria.Proteobacteria.Gammaproteobacteria.Enterobacteriales.Enterobacteriaceae.Buchnera.Buchnera_aphidicola 0.0 -
+Bacteria.Proteobacteria.Betaproteobacteria.Neisseriales.Neisseriaceae.Neisseria.Neisseria_subflava 0.0 -
+Bacteria.Firmicutes.Negativicutes.Selenomonadales.Veillonellaceae.Mitsuokella 3.30123393669 7.1459843253e-35
+Bacteria.Firmicutes.Clostridia.Clostridiales.Clostridiaceae.Clostridium.Clostridium_nexile 2.75489865549 -
+Bacteria.Firmicutes.Erysipelotrichia.Erysipelotrichales.Erysipelotrichaceae.Erysipelotrichaceae_noname.Erysipelotrichaceae_bacterium_6_1_45 1.66380257577 0.00190544522131
+Bacteria.Firmicutes.Clostridia.Clostridiales.Ruminococcaceae.Ruminococcus.Ruminococcus_albus 2.16604119535 0.00172774698654
+Bacteria.Bacteroidetes.Bacteroidia.Bacteroidales.Rikenellaceae.Alistipes.Alistipes_sp_HGB5 3.28917205615 -
+Bacteria.Firmicutes.Bacilli.Bacillales.Staphylococcaceae 0.0 -
+Bacteria.Bacteroidetes.Bacteroidia.Bacteroidales.Porphyromonadaceae.Barnesiella 4.27421343713 HMP 3.30465890097 0.00082168329233
+Bacteria.Firmicutes.Clostridia.Clostridiales.Lachnospiraceae.Lachnospiraceae_noname.Lachnospiraceae_bacterium_4_1_37FAA 0.409711165578 -
+Bacteria.Bacteroidetes.Bacteroidia.Bacteroidales.Bacteroidales_noname.Bacteroidales_noname.Bacteroidales_bacterium_ph8 3.72279980098 0.0419201507157
+Bacteria.Actinobacteria.Actinobacteria.Actinomycetales.Actinomycetaceae.Actinomyces.Actinomyces_graevenitzii 0.0802765804866 -
+Eukaryota 1.22082102584 1.27154008273e-08
+Bacteria.Firmicutes.Clostridia.Clostridiales.Peptostreptococcaceae.Peptostreptococcus 0.855989979593 0.0133946028044
+Bacteria.Firmicutes.Erysipelotrichia.Erysipelotrichales.Erysipelotrichaceae.Holdemania 2.6077636135 1.45318792698e-05
+Viruses.Viruses_noname.Viruses_noname.Viruses_noname.Potyviridae 1.22874245913 3.3122847922e-10
+Bacteria.Actinobacteria.Actinobacteria.Bifidobacteriales.Bifidobacteriaceae.Bifidobacterium.Bifidobacterium_adolescentis 3.82824751383 MetaHIT 3.4366084831 1.51092145053e-06
+Bacteria.Proteobacteria.Gammaproteobacteria.Enterobacteriales.Enterobacteriaceae.Enterobacteriaceae_noname 0.0 -
+Bacteria.Proteobacteria.Gammaproteobacteria.Enterobacteriales.Enterobacteriaceae.Klebsiella 2.45725169521 -
+Bacteria.Proteobacteria.Gammaproteobacteria.Enterobacteriales.Enterobacteriaceae.Proteus 0.34540343708 -
+Bacteria.Firmicutes.Bacilli.Lactobacillales.Aerococcaceae.Abiotrophia 0.0 -
+Bacteria.Proteobacteria.Gammaproteobacteria 3.94911216029 -
+Bacteria.Actinobacteria.Actinobacteria 4.1953333016 MetaHIT 3.77961882842 9.93245547217e-11
+Bacteria.Firmicutes.Bacilli.Lactobacillales.Streptococcaceae.Streptococcus.Streptococcus_gordonii 0.839801700204 -
+Bacteria.Proteobacteria.Betaproteobacteria.Burkholderiales.Sutterellaceae.Sutterella 3.84045514787 -
+Viruses.Viruses_noname.Viruses_noname.Caudovirales.Siphoviridae.Siphoviridae_noname.Streptococcus_phage_TP_778L 0.771328356865 -
+Bacteria.Firmicutes.Bacilli.Lactobacillales.Lactobacillaceae.Lactobacillus.Lactobacillus_mucosae 0.674332215648 -
+Bacteria.Firmicutes.Clostridia.Clostridiales.Lachnospiraceae.Lachnospiraceae_noname 3.8148176387 MetaHIT 3.16281499349 0.000145339008193
+Bacteria.Proteobacteria.Gammaproteobacteria.Enterobacteriales.Enterobacteriaceae.Enterobacter.Enterobacter_cloacae 1.72249266027 -
+Viruses.Viruses_noname.Viruses_noname.Caudovirales 3.32131906926 0.0364434332736
+Bacteria.Chlorobi.Chlorobia.Chlorobiales.Chlorobiaceae 0.735227809265 0.000670338618477
+Bacteria.Actinobacteria.Actinobacteria.Actinomycetales.Propionibacteriaceae.Propionibacterium.Propionibacterium_acnes 0.818548662056 0.0011700421212
+Viruses.Viruses_noname.Viruses_noname.Caudovirales.Siphoviridae.Siphoviridae_noname.Lactococcus_phage_phi7 2.50107587241 0.00753961701125
+Viruses.Viruses_noname.Viruses_noname.Viruses_noname.Retroviridae.Gammaretrovirus.Porcine_type_C_oncovirus 0.136944653062 -
+Bacteria.Spirochaetes.Spirochaetia.Spirochaetales.Spirochaetaceae.Sphaerochaeta 0.0 -
+Bacteria.Tenericutes.Mollicutes.Mycoplasmatales.Mycoplasmataceae.Mycoplasma.Mycoplasma_hominis 0.598924277475 -
+Bacteria.Proteobacteria.Epsilonproteobacteria.Campylobacterales.Campylobacteraceae.Campylobacter.Campylobacter_concisus 0.0 -
+Bacteria.Proteobacteria.Gammaproteobacteria.Enterobacteriales.Enterobacteriaceae.Citrobacter 1.01811352511 -
+Viruses.Viruses_noname 3.39503290096 MetaHIT 3.02737891052 1.67930843129e-08
+Bacteria.Firmicutes.Clostridia.Clostridiales.Clostridiaceae.Clostridium.Clostridium_symbiosum 2.0114807284 -
+Bacteria.Bacteroidetes.Bacteroidia.Bacteroidales.Bacteroidaceae.Bacteroides.Bacteroides_eggerthii 3.971918083 HMP 3.29808497978 0.00408540986717
+Bacteria.Firmicutes.Clostridia.Clostridiales.Clostridiales_Family_XI_Incertae_Sedis.Finegoldia 0.0 -
+Bacteria.Verrucomicrobia.Verrucomicrobiae.Verrucomicrobiales.Verrucomicrobiaceae.Akkermansia 4.0546495379 -
+Bacteria.Synergistetes.Synergistia.Synergistales.Synergistaceae.Fretibacterium 0.0 -
+Bacteria.Proteobacteria.Gammaproteobacteria.Enterobacteriales.Enterobacteriaceae.Raoultella.Raoultella_ornithinolytica 0.0 -
+Bacteria.Proteobacteria.Betaproteobacteria.Burkholderiales.Alcaligenaceae.Bordetella.Bordetella_unclassified 0.169015021337 -
+Bacteria.Actinobacteria.Actinobacteria.Bifidobacteriales.Bifidobacteriaceae.Alloscardovia 0.0 -
+Bacteria.Proteobacteria.Alphaproteobacteria.Caulobacterales.Caulobacteraceae.Asticcacaulis 0.0860720754998 -
+Archaea.Euryarchaeota.Methanococci.Methanococcales 1.26269072977 2.65110751199e-05
+Bacteria.Firmicutes.Erysipelotrichia.Erysipelotrichales.Erysipelotrichaceae.Erysipelotrichaceae_noname.Erysipelotrichaceae_bacterium_21_3 1.56709768945 0.00509760763955
+Bacteria.Firmicutes.Clostridia.Clostridiales.Clostridiaceae.Butyricicoccus 0.34639249922 MetaHIT 3.34013341988 0.0050913470325
+Bacteria.Firmicutes.Erysipelotrichia.Erysipelotrichales.Erysipelotrichaceae.Holdemania.Holdemania_unclassified 1.81872561733 -
+Bacteria.Synergistetes.Synergistia.Synergistales 2.57133463097 -
+Bacteria.Bacteroidetes.Bacteroidia.Bacteroidales.Prevotellaceae.Prevotella.Prevotella_bivia 1.11117060921 0.045203063499
+Bacteria.Proteobacteria.Alphaproteobacteria.Caulobacterales.Caulobacteraceae.Asticcacaulis.Asticcacaulis_unclassified 0.0860720754998 -
+Bacteria.Firmicutes.Bacilli.Lactobacillales.Lactobacillaceae.Lactobacillus.Lactobacillus_acidophilus 0.242661873278 -
+Bacteria.Fusobacteria.Fusobacteriia 2.59143226521 -
+Bacteria.Fusobacteria.Fusobacteriia.Fusobacteriales.Leptotrichiaceae.Leptotrichia.Leptotrichia_wadei 0.0 -
+Bacteria.Firmicutes.Bacilli.Lactobacillales.Lactobacillaceae.Lactobacillus.Lactobacillus_gasseri 0.0 -
+Bacteria.Firmicutes.Bacilli.Lactobacillales.Streptococcaceae.Streptococcus.Streptococcus_mutans 1.08412472336 0.0156077744512
+Bacteria.Proteobacteria.Gammaproteobacteria.Pasteurellales.Pasteurellaceae.Haemophilus.Haemophilus_pittmaniae 1.60925650259 -
+Bacteria.Proteobacteria.Gammaproteobacteria.Chromatiales 0.429572832624 -
+Bacteria.Proteobacteria.Gammaproteobacteria.Enterobacteriales.Enterobacteriaceae 3.90008969368 -
+Bacteria.Tenericutes.Mollicutes.Mycoplasmatales.Mycoplasmataceae.Mycoplasma 0.598924277475 -
+Bacteria.Firmicutes.Clostridia.Clostridiales.Clostridiaceae.Clostridium.Clostridium_sp_ATCC_BAA_442 2.12541104832 -
+Bacteria.Bacteroidetes.Bacteroidia.Bacteroidales.Porphyromonadaceae.Porphyromonas.Porphyromonas_bennonis 0.994022654535 -
+Viruses.Viruses_noname.Viruses_noname.Viruses_noname.Geminiviridae.Mastrevirus 1.47146951426 0.000133922718974
+Bacteria.Firmicutes.Clostridia.Clostridiales.Clostridiaceae.Clostridium.Clostridium_leptum 2.97220183905 -
+Bacteria.Tenericutes.Mollicutes.Acholeplasmatales.Acholeplasmataceae.Candidatus_Phytoplasma.Candidatus_Phytoplasma_unclassified 0.0 -
+Viruses.Viruses_noname.Viruses_noname 3.39503290096 MetaHIT 3.0304432349 1.67930843129e-08
+Bacteria.Firmicutes.Bacilli.Lactobacillales.Lactobacillaceae.Lactobacillus.Lactobacillus_sakei 0.772632817411 0.00335428910734
+Bacteria.Firmicutes.Clostridia.Clostridiales.Ruminococcaceae.Ruminococcus.Ruminococcus_bromii 4.27663990698 -
+Bacteria.Firmicutes.Clostridia.Clostridiales.Clostridiales_Family_XI_Incertae_Sedis.Anaerococcus 0.277106047832 -
+Bacteria.Actinobacteria.Actinobacteria.Actinomycetales.Actinomycetaceae.Actinomyces.Actinomyces_odontolyticus 0.853231018582 -
+Bacteria.Bacteroidetes.Bacteroidia.Bacteroidales.Bacteroidales_noname 3.72279980098 0.0419201507157
+Bacteria.Proteobacteria.Gammaproteobacteria.Enterobacteriales.Enterobacteriaceae.Pantoea 1.89389620642 0.00743986021952
+Bacteria.Firmicutes.Bacilli.Bacillales.Bacillales_noname 0.644647428229 -
+Bacteria.Firmicutes.Clostridia.Clostridiales.Clostridiaceae.Clostridium.Clostridium_hathewayi 2.63886728149 0.000911213276685
+Bacteria.Firmicutes.Clostridia.Clostridiales.Lachnospiraceae.Lachnospiraceae_noname.Lachnospiraceae_bacterium_8_1_57FAA 3.02041569717 0.0177428964645
+Bacteria.Actinobacteria.Actinobacteria.Actinomycetales.Propionibacteriaceae.Propionibacterium.Propionibacterium_freudenreichii 1.03382974761 0.0156077744512
+Bacteria.Firmicutes.Negativicutes.Selenomonadales.Acidaminococcaceae.Acidaminococcus.Acidaminococcus_unclassified 3.35087228313 -
+Bacteria.Acidobacteria 1.83195376059 1.31015343009e-16
+Bacteria.Tenericutes.Mollicutes 0.598924277475 -
+Viruses.Viruses_noname.Viruses_noname.Viruses_noname.Viruses_noname.Viruses_noname.Emilia_yellow_vein_virus_associated_DNA_beta 0.766367774778 -
+Bacteria.Proteobacteria.Betaproteobacteria.Burkholderiales.Burkholderiales_noname.Thiomonas 0.0 -
+Bacteria.Proteobacteria.Gammaproteobacteria.Pseudomonadales.Moraxellaceae 1.87434127294 -
+Bacteria.Proteobacteria.Betaproteobacteria.Burkholderiales.Burkholderiaceae.Cupriavidus 0.362870734223 0.0393019864501
+Bacteria.Proteobacteria.Alphaproteobacteria.Sphingomonadales.Sphingomonadaceae 0.0 -
+Bacteria.Bacteroidetes.Bacteroidia.Bacteroidales.Prevotellaceae.Prevotella.Prevotella_stercorea 3.25407081535 -
+Bacteria.Bacteroidetes.Bacteroidia.Bacteroidales.Porphyromonadaceae.Porphyromonas 1.89552588608 0.00498036306729
+Bacteria.Bacteroidetes.Bacteroidia.Bacteroidales.Porphyromonadaceae.Porphyromonas.Porphyromonas_asaccharolytica 1.54256572697 0.00611513637514
+Bacteria.Firmicutes.Clostridia.Clostridiales.Lachnospiraceae.Lachnospiraceae_noname.Lachnospiraceae_bacterium_7_1_58FAA 2.96134341647 7.89487039451e-06
+Bacteria.Firmicutes.Bacilli.Lactobacillales.Enterococcaceae.Enterococcus.Enterococcus_faecalis 1.32920027151 -
+Bacteria.Chlamydiae 0.0 -
+Bacteria.Proteobacteria.Betaproteobacteria.Burkholderiales.Sutterellaceae.Sutterellaceae_unclassified 2.93792953038 1.59245558996e-05
+Bacteria.Firmicutes.Negativicutes.Selenomonadales.Veillonellaceae.Veillonella.Veillonella_dispar 1.8676103186 -
+Bacteria.Firmicutes.Clostridia.Clostridiales.Lachnospiraceae.Coprococcus.Coprococcus_eutactus 3.05386890295 1.1296188763e-05
+Bacteria.Bacteroidetes.Bacteroidia.Bacteroidales.Bacteroidaceae.Bacteroides.Bacteroides_faecis 3.86326469064 -
+Viruses.Viruses_noname.Viruses_noname.Viruses_noname.Orthomyxoviridae 0.0 -
+Bacteria.Firmicutes.Clostridia.Clostridiales.Eubacteriaceae.Eubacterium.Eubacterium_siraeum 4.33738510987 MetaHIT 3.82803523149 2.55158248e-05
+Bacteria.Firmicutes.Bacilli.Lactobacillales.Lactobacillaceae.Lactobacillus.Lactobacillus_amylovorus 2.82107793704 -
+Bacteria.Firmicutes.Bacilli.Bacillales.Alicyclobacillaceae.Alicyclobacillus 0.0935631722076 -
+Bacteria.Bacteroidetes.Flavobacteriia.Flavobacteriales.Flavobacteriaceae.Capnocytophaga 0.11663457382 -
+Bacteria.Firmicutes.Erysipelotrichia.Erysipelotrichales.Erysipelotrichaceae.Erysipelotrichaceae_noname 3.44501055341 0.0114623486144
+Bacteria.Proteobacteria.Gammaproteobacteria.Enterobacteriales.Enterobacteriaceae.Candidatus_Moranella 0.0 -
+Bacteria.Fusobacteria.Fusobacteriia.Fusobacteriales 2.59143226521 -
+Bacteria.Spirochaetes.Spirochaetia.Spirochaetales.Spirochaetaceae.Sphaerochaeta.Sphaerochaeta_unclassified 0.0 -
+Bacteria.Actinobacteria.Actinobacteria.Coriobacteriales.Coriobacteriaceae.Collinsella.Collinsella_stercoris 1.38439596192 -
+Bacteria.Firmicutes.Bacilli.Bacillales.Staphylococcaceae.Staphylococcus.Staphylococcus_warneri 0.0 -
+Bacteria.Firmicutes.Bacilli.Lactobacillales.Aerococcaceae 0.0 -
+Viruses.Viruses_noname.Viruses_noname.Viruses_noname.Viruses_noname.Viruses_noname.Malvastrum_leaf_curl_Philippines_betasatellite 0.730684417513 -
+Bacteria.Firmicutes.Clostridia.Clostridiales.Ruminococcaceae.Ruminococcaceae_noname 2.23293453613 2.06076696035e-14
+Bacteria.Actinobacteria.Actinobacteria.Actinomycetales.Dermatophilaceae 1.085495992 0.00149836161228
+Bacteria.Proteobacteria.Gammaproteobacteria.Enterobacteriales.Enterobacteriaceae.Proteus.Proteus_unclassified 0.0 -
+Viruses.Viruses_noname.Viruses_noname.Caudovirales.Myoviridae.Mulikevirus 0.0 -
+Bacteria.Proteobacteria.Alphaproteobacteria.Sphingomonadales.Sphingomonadaceae.Sphingomonas.Sphingomonas_echinoides 0.0 -
+Bacteria.Firmicutes.Bacilli.Lactobacillales.Aerococcaceae.Abiotrophia.Abiotrophia_defectiva 0.0 -
+Bacteria.Bacteroidetes.Bacteroidetes_noname 0.0 -
+Bacteria.Proteobacteria.Gammaproteobacteria.Pasteurellales.Pasteurellaceae 3.15418412357 -
+Bacteria.Aquificae 0.218943758973 -
+Bacteria.Proteobacteria.Gammaproteobacteria.Pseudomonadales.Pseudomonadaceae.Pseudomonas.Pseudomonas_aeruginosa 0.10885192368 MetaHIT 3.35271507134 0.0393019864501
+Bacteria.Tenericutes.Mollicutes.Entomoplasmatales.Spiroplasmataceae 0.0 -
+Bacteria.Bacteroidetes.Bacteroidia.Bacteroidales.Prevotellaceae.Prevotella.Prevotella_melaninogenica 0.0 -
+Bacteria.Bacteroidetes.Bacteroidia.Bacteroidales.Porphyromonadaceae.Parabacteroides.Parabacteroides_merdae 4.57368204792 HMP 4.14171419919 0.000264669353492
+Bacteria.Proteobacteria.Alphaproteobacteria.Rhizobiales.Bradyrhizobiaceae.Rhodopseudomonas 0.0 -
+Bacteria.Firmicutes.Clostridia.Clostridiales.Lachnospiraceae.Dorea.Dorea_longicatena 3.74326350826 MetaHIT 3.34949114866 2.99411328333e-11
+Viruses.Viruses_noname.Viruses_noname.Caudovirales.Siphoviridae.C2likevirus.C2likevirus_unclassified 2.60815956752 -
+Eukaryota.Ascomycota.Saccharomycetes.Saccharomycetales 1.20783286295 3.04550724598e-08
+Viruses.Viruses_noname.Viruses_noname.Viruses_noname.Viruses_noname.Viruses_noname.Tomato_yellow_leaf_curl_Vietnam_virus_satellite_DNA_beta 0.816140870435 -
+Bacteria.Proteobacteria.Alphaproteobacteria.Caulobacterales 0.333559212452 MetaHIT 3.52561498021 0.0393019864501
+Bacteria.Proteobacteria.Betaproteobacteria.Gallionellales.Gallionellaceae.Gallionellaceae_unclassified 2.18292452053 4.31042940631e-07
+Bacteria.Bacteroidetes.Bacteroidia.Bacteroidales.Porphyromonadaceae.Odoribacter 4.09607178472 -
+Bacteria.Firmicutes.Bacilli.Lactobacillales.Streptococcaceae.Streptococcus.Streptococcus_thermophilus 2.45186083918 -
+Viruses.Viruses_noname.Viruses_noname.Viruses_noname.Microviridae.Microvirus 2.08508506672 -
+Bacteria.Actinobacteria.Actinobacteria.Actinomycetales.Propionibacteriaceae.Propionibacteriaceae_unclassified 0.995729861858 0.000551352546711
+Bacteria.Proteobacteria.Gammaproteobacteria.Enterobacteriales.Enterobacteriaceae.Klebsiella.Klebsiella_pneumoniae 2.44038743752 -
+Viruses.Viruses_noname.Viruses_noname.Viruses_noname.Viruses_noname 1.4992982146 0.000670338618477
+Bacteria.Proteobacteria.Gammaproteobacteria.Pasteurellales.Pasteurellaceae.Haemophilus.Haemophilus_sputorum 0.424980576028 -
+Bacteria.Firmicutes.Clostridia.Clostridiales.Clostridiaceae.Clostridium.Clostridium_sp_D5 1.07243925188 -
+Bacteria.Actinobacteria.Actinobacteria.Actinomycetales.Micrococcaceae 1.38026607603 6.01558493814e-05
+Bacteria.Bacteroidetes.Bacteroidia.Bacteroidales.Bacteroidaceae.Bacteroides.Bacteroides_finegoldii 4.15100391588 -
+Viruses.Viruses_noname.Viruses_noname.Viruses_noname.Microviridae 2.08508506672 -
+Bacteria.Proteobacteria.Betaproteobacteria.Burkholderiales.Comamonadaceae.Comamonas.Comamonas_unclassified 1.20660783883 2.79685578674e-08
+Bacteria.Firmicutes.Clostridia.Clostridiales.Ruminococcaceae.Faecalibacterium 4.75439738268 MetaHIT 4.18635345017 1.30338927546e-09
+Viruses.Viruses_noname.Viruses_noname.Viruses_noname.Orthomyxoviridae.Influenzavirus_A.Influenza_A_virus 0.0 -
+Bacteria.Bacteroidetes.Bacteroidia.Bacteroidales.Bacteroidaceae.Bacteroides.Bacteroides_coprocola 3.72330674925 HMP 3.28499436896 0.00812000697735
+Bacteria.Firmicutes.Clostridia.Clostridiales.Lachnospiraceae.Blautia.Ruminococcus_obeum 3.48941539336 MetaHIT 3.05155861802 2.0316081518e-11
+Bacteria.Proteobacteria.Epsilonproteobacteria.Campylobacterales 1.70151207731 0.0209130105172
+Bacteria.Proteobacteria.Gammaproteobacteria.Oceanospirillales.Halomonadaceae.Halomonas 0.0 -
+Bacteria.Firmicutes.Clostridia.Clostridiales.Lachnospiraceae.Lachnospiraceae_noname.Lachnospiraceae_bacterium_1_1_57FAA 3.15871116183 -
+Bacteria.Proteobacteria.Betaproteobacteria.Burkholderiales.Oxalobacteraceae.Oxalobacter.Oxalobacter_formigenes 2.3101566993 0.00464058959143
+Bacteria.Firmicutes.Bacilli.Lactobacillales.Lactobacillaceae.Pediococcus 1.69482669865 -
+Bacteria.Firmicutes.Bacilli 3.72078662475 MetaHIT 3.37310399354 5.85313458662e-05
+Viruses.Viruses_noname.Viruses_noname.Viruses_noname.Togaviridae 0.0 -
+Bacteria.Tenericutes.Mollicutes.Entomoplasmatales.Spiroplasmataceae.Spiroplasma 0.0 -
+Bacteria.Firmicutes.Erysipelotrichia.Erysipelotrichales.Erysipelotrichaceae.Erysipelotrichaceae_noname.Erysipelotrichaceae_bacterium_5_2_54FAA 1.47272488837 0.00366876878641
+Bacteria.Firmicutes.Clostridia.Clostridiales.Oscillospiraceae.Oscillibacter.Oscillibacter_sp_KLE_1745 2.71515297859 -
+Bacteria.Firmicutes.Bacilli.Lactobacillales.Lactobacillaceae.Pediococcus.Pediococcus_acidilactici 0.0 -
+Bacteria.Firmicutes.Clostridia.Clostridiales.Ruminococcaceae.Ruminococcus.Ruminococcus_champanellensis 2.88001225987 0.00459884293047
+Bacteria.Actinobacteria.Actinobacteria.Actinomycetales.Brevibacteriaceae.Brevibacterium 0.895902257773 MetaHIT 3.37691471853 0.00335428910734
+Bacteria.Firmicutes.Erysipelotrichia.Erysipelotrichales.Erysipelotrichaceae.Turicibacter.Turicibacter_unclassified 1.83452590569 -
+Bacteria.Proteobacteria.Alphaproteobacteria.Sphingomonadales 0.0 -
+Bacteria.Firmicutes.Clostridia.Clostridiales.Lachnospiraceae.Lachnospiraceae_noname.Lachnospiraceae_bacterium_2_1_58FAA 2.46365241713 0.000317685393148
+Bacteria.Firmicutes.Clostridia.Clostridiales.Lachnospiraceae.Lachnospiraceae_noname.Lachnospiraceae_bacterium_6_1_63FAA 0.729541106822 -
+Bacteria.Firmicutes.Negativicutes.Selenomonadales.Veillonellaceae.Veillonella.Veillonella_ratti 0.0 -
+Bacteria.Bacteroidetes.Bacteroidia.Bacteroidales.Prevotellaceae 4.89921812482 MetaHIT 4.13855458369 0.0118427535259
+Bacteria.Tenericutes 0.598924277475 -
+Bacteria.Bacteroidetes.Bacteroidia.Bacteroidales.Porphyromonadaceae.Odoribacter.Odoribacter_unclassified 2.43875963849 -
+Bacteria.Firmicutes.Clostridia.Clostridiales.Peptostreptococcaceae.Peptostreptococcaceae_noname.Peptostreptococcaceae_noname_unclassified 2.50548160377 2.51864494883e-06
+Bacteria.Firmicutes.Negativicutes.Selenomonadales.Veillonellaceae.Megasphaera.Megasphaera_elsdenii 1.95073356669 -
+Bacteria.Actinobacteria.Actinobacteria.Coriobacteriales.Coriobacteriaceae.Adlercreutzia 2.82846523493 0.0015524586863
+Viruses.Viruses_noname.Viruses_noname.Caudovirales.Siphoviridae.Siphoviridae_noname.Lactococcus_phage_936_sensu_lato 2.3721753029 0.00753961701125
+Bacteria.Synergistetes.Synergistia 2.57133463097 -
+Archaea.Euryarchaeota.Methanobacteria.Methanobacteriales.Methanobacteriaceae.Methanobrevibacter.Methanobrevibacter_smithii 3.45496613059 MetaHIT 3.15464581419 1.64629678016e-05
+Bacteria.Proteobacteria.Epsilonproteobacteria.Campylobacterales.Campylobacteraceae.Campylobacter.Campylobacter_hominis 1.67575856641 -
+Bacteria.Tenericutes.Mollicutes.Acholeplasmatales.Acholeplasmataceae.Candidatus_Phytoplasma 0.0 -
+Bacteria.Proteobacteria.Betaproteobacteria.Burkholderiales.Comamonadaceae.Comamonas 1.20660783883 2.79685578674e-08
+Bacteria.Actinobacteria.Actinobacteria.Coriobacteriales.Coriobacteriaceae.Collinsella.Collinsella_aerofaciens 3.47541523784 1.09733126643e-05
+Bacteria.Bacteroidetes.Bacteroidia.Bacteroidales.Rikenellaceae.Alistipes.Alistipes_onderdonkii 4.12204847138 -
+Bacteria.Firmicutes.Clostridia.Halanaerobiales.Halobacteroidaceae 1.02314849428 MetaHIT 3.04891315464 0.00149836161228
+Bacteria.Proteobacteria.Gammaproteobacteria.Oceanospirillales 0.116969806937 -
+Bacteria.Bacteroidetes.Bacteroidia.Bacteroidales.Bacteroidaceae.Bacteroides.Bacteroides_sp_4_3_47FAA 3.49196378554 -
+Bacteria.Firmicutes.Clostridia.Clostridiales.Lachnospiraceae.Lachnospiraceae_noname.Lachnospiraceae_bacterium_9_1_43BFAA 0.930398402081 -
+Bacteria.Firmicutes.Clostridia.Clostridiales 5.59968701694 MetaHIT 5.00998703839 7.34410188106e-11
+Bacteria.Proteobacteria.Betaproteobacteria.Burkholderiales.Comamonadaceae.Polaromonas.Polaromonas_unclassified 0.765148399801 -
+Bacteria.Candidatus_Saccharibacteria.Candidatus_Saccharibacteria_noname.Candidatus_Saccharibacteria_noname.Candidatus_Saccharibacteria_noname.Candidatus_Saccharibacteria_noname 0.0 -
+Bacteria.Firmicutes.Negativicutes.Selenomonadales.Veillonellaceae.Veillonella.Veillonella_parvula 2.93242120115 -
+Bacteria.Firmicutes.Bacilli.Lactobacillales.Enterococcaceae.Enterococcus.Enterococcus_faecium 1.67879339817 -
+Bacteria.Firmicutes.Clostridia.Clostridiales.Clostridiales_Family_XI_Incertae_Sedis.Parvimonas 1.32064970024 -
+Bacteria.Proteobacteria.Epsilonproteobacteria.Campylobacterales.Campylobacteraceae.Campylobacter.Campylobacter_ureolyticus 0.142092229313 HMP 3.27751067854 0.0366940048492
+Viruses.Viruses_noname.Viruses_noname.Viruses_noname.Geminiviridae 1.47146951426 0.000133922718974
+Bacteria.Proteobacteria.Gammaproteobacteria.Enterobacteriales.Enterobacteriaceae.Enterobacter.Enterobacter_hormaechei 0.0 -
+Bacteria.Proteobacteria.Gammaproteobacteria.Enterobacteriales.Enterobacteriaceae.Klebsiella.Klebsiella_oxytoca 0.700633802148 -
+Bacteria.Firmicutes.Clostridia.Clostridiales.Lachnospiraceae.Blautia.Blautia_producta 0.344123575223 -
+Bacteria.Firmicutes.Bacilli.Lactobacillales.Streptococcaceae.Lactococcus 1.97197294275 0.0132176293971
+Bacteria.Actinobacteria.Actinobacteria.Actinomycetales.Micrococcaceae.Rothia.Rothia_unclassified 0.481630786442 -
+Bacteria.Verrucomicrobia.Verrucomicrobiae.Verrucomicrobiales.Verrucomicrobiaceae.Akkermansia.Akkermansia_muciniphila 4.0546495379 -
+Bacteria.Proteobacteria.Betaproteobacteria.Burkholderiales.Burkholderiaceae.Lautropia 0.0706907307645 -
+Bacteria.Firmicutes.Bacilli.Lactobacillales.Lactobacillaceae.Lactobacillus.Lactobacillus_casei_paracasei 0.882886560375 -
+Bacteria.Firmicutes.Negativicutes.Selenomonadales.Veillonellaceae.Veillonella.Veillonella_sp_3_1_44 1.28243213629 -
+Archaea.Euryarchaeota.Methanobacteria 3.52537506316 MetaHIT 3.21770601398 2.37509692531e-05
+Bacteria.Proteobacteria.Betaproteobacteria.Burkholderiales.Burkholderiales_noname.Thiomonas.Thiomonas_unclassified 0.0 -
+Bacteria.Firmicutes.Negativicutes.Selenomonadales.Acidaminococcaceae.Acidaminococcus.Acidaminococcus_intestini 2.00593409311 -
+Bacteria.Firmicutes.Negativicutes.Selenomonadales 4.56824359495 MetaHIT 3.91815223946 0.0015435879065
+Bacteria.Fusobacteria.Fusobacteriia.Fusobacteriales.Leptotrichiaceae.Leptotrichia 0.0 -
+Bacteria.Firmicutes.Erysipelotrichia.Erysipelotrichales.Erysipelotrichaceae.Erysipelotrichaceae_noname.Clostridium_innocuum 0.600024354551 -
+Bacteria.Actinobacteria.Actinobacteria.Coriobacteriales.Coriobacteriaceae.Atopobium.Atopobium_parvulum 0.136944667528 -
+Bacteria.Bacteroidetes.Bacteroidia.Bacteroidales.Prevotellaceae.Prevotella.Prevotella_disiens 1.8242335592 -
+Bacteria.Firmicutes.Clostridia.Clostridiales.Eubacteriaceae.Eubacterium.Eubacterium_ventriosum 3.2459507531 -
+Bacteria.Bacteroidetes.Bacteroidia.Bacteroidales.Porphyromonadaceae.Odoribacter.Odoribacter_splanchnicus 4.04141168674 -
+Bacteria.Firmicutes.Clostridia.Clostridiales.Clostridiaceae.Clostridium.Clostridium_sp_KLE_1755 1.46351703687 -
+Bacteria.Chlorobi.Chlorobia.Chlorobiales.Chlorobiaceae.Chlorobium 0.735227809265 0.000670338618477
+Bacteria.Candidatus_Saccharibacteria.Candidatus_Saccharibacteria_noname.Candidatus_Saccharibacteria_noname.Candidatus_Saccharibacteria_noname 0.179005983218 -
+Bacteria.Firmicutes.Negativicutes.Selenomonadales.Veillonellaceae.Megasphaera 3.10116467026 0.000100015529344
+Bacteria.Firmicutes.Negativicutes.Selenomonadales.Veillonellaceae.Mitsuokella.Mitsuokella_unclassified 3.09393682919 2.31855911734e-35
+Bacteria.Firmicutes.Clostridia.Clostridiales.Clostridiales_Family_XI_Incertae_Sedis.Peptoniphilus.Peptoniphilus_duerdenii 0.0 -
+Bacteria.Firmicutes.Clostridia.Clostridiales.Ruminococcaceae.Subdoligranulum.Subdoligranulum_unclassified 4.99054663815 MetaHIT 4.47774468936 1.67747217649e-09
+Bacteria.Acidobacteria.Acidobacteriia.Acidobacteriales.Acidobacteriaceae.Granulicella.Granulicella_unclassified 1.81983629728 9.53859316605e-16
+Bacteria.Firmicutes.Clostridia.Clostridiales.Clostridiales_Family_XI_Incertae_Sedis.Finegoldia.Finegoldia_magna 0.0 -
+Viruses.Viruses_noname.Viruses_noname.Caudovirales.Myoviridae 0.318483726529 -
+Bacteria.Proteobacteria.Gammaproteobacteria.Pseudomonadales.Pseudomonadaceae.Pseudomonas.Pseudomonas_unclassified 1.34607623394 0.0110159792995
+Viruses.Viruses_noname.Viruses_noname.Caudovirales.Myoviridae.P2likeviruses.Yersinia_phage_L_413C 0.240979989188 -
+Bacteria.Firmicutes.Bacilli.Lactobacillales.Lactobacillaceae.Lactobacillus.Lactobacillus_johnsonii 2.56455847241 -
+Viruses.Viruses_noname.Viruses_noname.Caudovirales.Myoviridae.Mulikevirus.Mulikevirus_unclassified 0.0 -
+Bacteria.Firmicutes.Bacilli.Lactobacillales.Streptococcaceae.Streptococcus.Streptococcus_sanguinis 1.51557950654 -
+Bacteria.Firmicutes.Bacilli.Bacillales.Alicyclobacillaceae.Alicyclobacillus.Alicyclobacillus_unclassified 0.0935631722076 -
+Bacteria.Firmicutes.Negativicutes.Selenomonadales.Veillonellaceae.Megamonas.Megamonas_hypermegale 1.63327457463 -
+Viruses.Viruses_noname.Viruses_noname.Caudovirales.Podoviridae.P22likevirus.Salmonella_phage_HK620 1.38818012795 -
+Bacteria.Aquificae.Aquificae.Aquificales.Desulfurobacteriaceae.Desulfurobacteriaceae_unclassified 0.218943758973 -
+Viruses.Viruses_noname.Viruses_noname.Viruses_noname.Retroviridae.Gammaretrovirus.Abelson_murine_leukemia_virus 0.158788735088 -
+Bacteria.Proteobacteria.Alphaproteobacteria.Rhizobiales.Bartonellaceae.Bartonella.Bartonella_unclassified 1.26467475808 0.000133922718974
+Bacteria.Firmicutes.Clostridia.Clostridiales.Lachnospiraceae.Blautia.Ruminococcus_torques 4.13628207983 MetaHIT 3.43156206618 2.84413002705e-08
+Bacteria.Bacteroidetes.Sphingobacteriia.Sphingobacteriales 2.07193033385 2.47589575774e-14
+Bacteria.Firmicutes.Clostridia.Clostridiales.Lachnospiraceae.Catonella 0.0 -
+Bacteria.Actinobacteria.Actinobacteria.Coriobacteriales.Coriobacteriaceae.Eggerthella.Eggerthella_lenta 1.57428854901 -
+Bacteria.Bacteroidetes.Bacteroidia.Bacteroidales.Rikenellaceae.Alistipes.Alistipes_sp_JC136 1.33633013024 -
+Bacteria.Firmicutes.Erysipelotrichia.Erysipelotrichales.Erysipelotrichaceae.Erysipelotrichaceae_noname.Eubacterium_cylindroides 2.23471153639 0.000528853325658
+Bacteria.Actinobacteria.Actinobacteria.Bifidobacteriales.Bifidobacteriaceae.Bifidobacterium.Bifidobacterium_pseudocatenulatum 2.69361415068 -
+Bacteria.Firmicutes.Bacilli.Lactobacillales.Leuconostocaceae.Weissella.Weissella_cibaria 1.12726845458 MetaHIT 3.22988842334 0.0393019864501
+Viruses.Viruses_noname.Viruses_noname.Nidovirales.Coronaviridae 0.0 -
+Bacteria.Firmicutes.Bacilli.Lactobacillales.Streptococcaceae.Streptococcus.Streptococcus_parasanguinis 2.90531006189 0.0220483659564
+Bacteria.Bacteroidetes.Bacteroidia.Bacteroidales.Prevotellaceae.Prevotella.Prevotella_amnii 0.0 -
+Bacteria.Firmicutes.Bacilli.Lactobacillales.Lactobacillaceae.Pediococcus.Pediococcus_pentosaceus 1.63719650249 -
+Bacteria.Fusobacteria.Fusobacteriia.Fusobacteriales.Fusobacteriaceae.Fusobacterium.Fusobacterium_nucleatum 0.706019099101 -
+Bacteria.Bacteroidetes.Bacteroidia.Bacteroidales.Bacteroidaceae.Bacteroides.Bacteroides_cellulosilyticus 4.30926439473 -
+Bacteria.Actinobacteria.Actinobacteria.Coriobacteriales.Coriobacteriaceae.Eggerthella 2.21665896774 -
+Bacteria.Firmicutes.Bacilli.Lactobacillales.Leuconostocaceae.Weissella 2.78284093128 0.00753961701125
+Bacteria.Firmicutes.Clostridia.Clostridiales.Eubacteriaceae.Eubacterium.Eubacterium_brachy 0.0 -
+Bacteria.Firmicutes.Clostridia.Clostridiales.Lachnospiraceae.Coprococcus.Coprococcus_comes 3.68891790803 MetaHIT 3.24461424355 1.18521563604e-11
+Bacteria.Bacteroidetes.Flavobacteriia.Flavobacteriales 2.164560128 9.77374156167e-14
+Bacteria.Actinobacteria.Actinobacteria.Actinomycetales.Propionibacteriaceae.Propionibacterium 1.03382974761 -
+Bacteria.Bacteroidetes.Bacteroidia.Bacteroidales.Bacteroidaceae.Bacteroides.Bacteroides_plebeius 3.93923027657 MetaHIT 3.39108553874 0.00137914098658
+Bacteria.Firmicutes.Clostridia.Clostridiales.Ruminococcaceae.Ruminococcus.Ruminococcus_flavefaciens 1.91577279156 6.18166169867e-19
+Viruses.Viruses_noname.Viruses_noname.Viruses_noname.Viruses_noname.Viruses_noname.Honeysuckle_yellow_vein_betasatellite 0.616830812785 -
+Bacteria.Firmicutes.Bacilli.Bacillales 0.795353275635 0.0423552163646
+Bacteria.Firmicutes.Bacilli.Lactobacillales.Lactobacillaceae.Lactobacillus.Lactobacillus_plantarum 0.0 -
+Viruses.Viruses_noname.Viruses_noname.Viruses_noname.Papillomaviridae 1.2078871788 -
+Bacteria.Firmicutes.Bacilli.Lactobacillales.Aerococcaceae.Aerococcus 0.0 -
+Bacteria.Actinobacteria.Actinobacteria.Actinomycetales.Actinomycetales_noname.Tropheryma.Tropheryma_whipplei 0.31802115202 MetaHIT 3.36213893146 0.0393019864501
+Bacteria.Synergistetes.Synergistia.Synergistales.Synergistaceae.Fretibacterium.Fretibacterium_fastidiosum 0.0 -
+Bacteria.Bacteroidetes.Bacteroidetes_noname.Bacteroidetes_noname 0.0 -
+Bacteria.Proteobacteria.Gammaproteobacteria.Pseudomonadales.Pseudomonadaceae 1.37052616744 0.00162437498592
+Bacteria.Firmicutes.Bacilli.Lactobacillales.Carnobacteriaceae.Granulicatella.Granulicatella_adiacens 0.280136712518 -
+Viruses.Viruses_noname.Viruses_noname.Caudovirales.Siphoviridae.Lambdalikevirus.Enterobacteria_phage_HK633 1.08535185231 -
+Bacteria.Bacteroidetes.Bacteroidia.Bacteroidales.Porphyromonadaceae.Butyricimonas.Butyricimonas_synergistica 2.00874717844 7.69645063136e-05
+Bacteria.Proteobacteria.Gammaproteobacteria.Enterobacteriales.Enterobacteriaceae.Shigella 0.0 -
+Bacteria.Firmicutes.Clostridia.Clostridiales.Oscillospiraceae.Oscillibacter.Oscillibacter_sp_KLE_1728 2.51712787537 -
+Archaea.Euryarchaeota.Methanococci.Methanococcales.Methanocaldococcaceae.Methanocaldococcus.Methanocaldococcus_unclassified 0.186208349918 -
+Bacteria.Firmicutes.Clostridia.Clostridiales.Ruminococcaceae.Anaerotruncus.Anaerotruncus_colihominis 1.99073786775 -
+Bacteria.Actinobacteria.Actinobacteria.Bifidobacteriales.Bifidobacteriaceae.Scardovia.Scardovia_unclassified 0.345007182963 -
+Bacteria.Proteobacteria.Deltaproteobacteria.Desulfovibrionales.Desulfovibrionaceae.Bilophila 3.38384599619 MetaHIT 3.00630993797 1.57163804565e-05
+Bacteria.Proteobacteria.Gammaproteobacteria.Enterobacteriales.Enterobacteriaceae.Escherichia 3.89515418432 -
+Bacteria.Proteobacteria.Betaproteobacteria.Burkholderiales.Sutterellaceae 3.90570442726 -
+Bacteria.Actinobacteria.Actinobacteria.Actinomycetales.Propionibacteriaceae 1.21892069105 0.00410321516979
+Bacteria.Firmicutes.Clostridia.Clostridiales.Ruminococcaceae.Subdoligranulum.Subdoligranulum_variabile 2.123627293 5.95393531171e-30
+Bacteria.Firmicutes.Clostridia.Clostridiales.Ruminococcaceae.Ruminococcus.Ruminococcus_sp_5_1_39BFAA 3.67279899563 MetaHIT 3.14212216271 0.0107959373701
+Bacteria.Proteobacteria.Betaproteobacteria.Gallionellales 2.18292452053 4.31042940631e-07
+Bacteria.Chlorobi 0.735227809265 0.000670338618477
+Bacteria.Bacteroidetes.Bacteroidia 5.87166403271 HMP 5.28185623127 3.96193321158e-25
+Bacteria.Actinobacteria.Actinobacteria.Actinomycetales.Brevibacteriaceae.Brevibacterium.Brevibacterium_linens 0.0 -
+Viruses.Viruses_noname.Viruses_noname.Viruses_noname.Adenoviridae.Mastadenovirus.Human_adenovirus_B 2.038254775 2.27053175613e-06
+Bacteria.Actinobacteria.Actinobacteria.Coriobacteriales.Coriobacteriaceae.Collinsella.Collinsella_unclassified 1.51834109045 0.00233493968267
+Bacteria.Firmicutes.Bacilli.Lactobacillales.Streptococcaceae.Streptococcus.Streptococcus_vestibularis 2.15757886128 0.0036352308285
+Viruses.Viruses_noname.Viruses_noname.Viruses_noname.Adenoviridae 2.05495334402 6.15148251338e-09
+Viruses.Viruses_noname.Viruses_noname.Viruses_noname.Circoviridae 0.917171241493 -
+Bacteria.Proteobacteria.Betaproteobacteria.Burkholderiales.Oxalobacteraceae.Candidatus_Zinderia.Candidatus_Zinderia_insecticola 0.0 MetaHIT 4.00386873819 0.00753961701125
+Bacteria.Bacteroidetes.Bacteroidia.Bacteroidales.Prevotellaceae.Prevotella 4.8297080361 -
+Viruses.Viruses_noname.Viruses_noname.Viruses_noname.Viruses_noname.Viruses_noname.Alternanthera_yellow_vein_betasatellite 0.985276731026 MetaHIT 3.31886889296 0.0393019864501
+Bacteria.Firmicutes.Negativicutes.Selenomonadales.Veillonellaceae.Veillonella.Veillonella_atypica 2.24774023169 -
+Bacteria.Firmicutes.Clostridia.Clostridiales.Ruminococcaceae.Subdoligranulum.Subdoligranulum_sp_4_3_54A2FAA 2.98921606347 -
+Bacteria.Firmicutes.Bacilli.Lactobacillales.Streptococcaceae.Streptococcus.Streptococcus_infantis 1.33388925292 0.00519730713115
+Bacteria.Proteobacteria.Betaproteobacteria.Neisseriales 1.07195634156 -
+Bacteria.Firmicutes.Clostridia.Clostridiales.Clostridiaceae.Clostridium.Clostridium_celatum 1.13244081807 MetaHIT 3.18993454544 0.0345347402618
+Bacteria.Firmicutes.Clostridia.Clostridiales.Ruminococcaceae.Subdoligranulum 4.99335443872 MetaHIT 4.47554711813 2.56071972083e-09
+Bacteria.Firmicutes.Bacilli.Bacillales.Bacillales_noname.Gemella.Gemella_unclassified 0.406798151415 MetaHIT 3.05127471068 0.0295272340141
+Bacteria.Proteobacteria.Gammaproteobacteria.Chromatiales.Ectothiorhodospiraceae 0.429572832624 -
+Bacteria.Firmicutes.Bacilli.Lactobacillales.Lactobacillaceae.Lactobacillus.Lactobacillus_curvatus 0.0 MetaHIT 4.31626549418 0.0393019864501
+Bacteria.Bacteroidetes.Bacteroidia.Bacteroidales.Porphyromonadaceae.Parabacteroides.Parabacteroides_johnsonii 3.32951108577 0.033294652801
+Bacteria.Firmicutes.Clostridia.Clostridiales.Clostridiaceae.Clostridium.Clostridium_methylpentosum 0.578383575267 -
+Bacteria.Deinococcus_Thermus.Deinococci.Deinococcales 2.27354372855 4.35362749418e-29
+Bacteria.Fusobacteria.Fusobacteriia.Fusobacteriales.Fusobacteriaceae.Fusobacterium 2.58685429186 -
+Bacteria.Firmicutes.Bacilli.Lactobacillales.Aerococcaceae.Aerococcus.Aerococcus_viridans 0.0 -
+Bacteria.Proteobacteria.Epsilonproteobacteria.Campylobacterales.Campylobacteraceae.Campylobacter.Campylobacter_curvus 0.0 -
+Bacteria.Proteobacteria.Betaproteobacteria.Burkholderiales.Burkholderiales_noname 3.15626668497 -
+Bacteria.Synergistetes.Synergistia.Synergistales.Synergistaceae.Synergistes.Synergistes_sp_3_1_syn1 2.56788737627 -
+Bacteria.Firmicutes.Clostridia.Clostridiales.Ruminococcaceae.Ruminococcus 4.46914658968 MetaHIT 3.6240370433 0.00511521778839
+Bacteria.Firmicutes.Bacilli.Lactobacillales 3.72027084029 MetaHIT 3.37276013998 7.39603576811e-05
+Bacteria.Proteobacteria.Gammaproteobacteria.Enterobacteriales.Enterobacteriaceae.Buchnera 0.0 -
+Bacteria.Firmicutes.Bacilli.Bacillales.Alicyclobacillaceae 0.0935631722076 -
+Bacteria.Firmicutes.Clostridia.Clostridiales.Clostridiales_noname.Clostridiales_noname.Bacteroides_pectinophilus 3.05046841905 0.000871853351824
+Bacteria.Firmicutes.Erysipelotrichia.Erysipelotrichales.Erysipelotrichaceae.Erysipelotrichaceae_noname.Erysipelotrichaceae_bacterium_2_2_44A 0.992690169679 -
+Bacteria.Actinobacteria.Actinobacteria.Actinomycetales.Micrococcaceae.Rothia.Rothia_mucilaginosa 1.32163399719 3.00934715247e-05
+Eukaryota.Ascomycota.Eurotiomycetes 0.0 -
+Bacteria.Actinobacteria.Actinobacteria.Coriobacteriales.Coriobacteriaceae.Gordonibacter 2.23482137852 -
+Archaea.Euryarchaeota.Methanobacteria.Methanobacteriales.Methanobacteriaceae 3.52537506316 MetaHIT 3.21456360055 2.37509692531e-05
+Bacteria.Proteobacteria.Gammaproteobacteria.Pasteurellales.Pasteurellaceae.Haemophilus.Haemophilus_haemolyticus 0.0 -
+Bacteria.Proteobacteria.Gammaproteobacteria.Pasteurellales.Pasteurellaceae.Haemophilus.Haemophilus_paraphrohaemolyticus 0.0 -
+Bacteria.Firmicutes.Erysipelotrichia.Erysipelotrichales.Erysipelotrichaceae.Holdemania.Holdemania_filiformis 2.51685708684 1.09874974715e-05
+Bacteria.Acidobacteria.Acidobacteriia.Acidobacteriales.Acidobacteriaceae.Acidobacteriaceae_unclassified 0.271536518265 MetaHIT 3.37531956313 0.0393019864501
+Bacteria.Proteobacteria.Gammaproteobacteria.Enterobacteriales.Enterobacteriaceae.Pantoea.Pantoea_unclassified 1.89389620642 0.00743986021952
+unclassified 5.15049284108 MetaHIT 4.82399875744 5.10535973862e-06
+Bacteria.Bacteroidetes.Flavobacteriia.Flavobacteriales.Flavobacteriaceae.Riemerella.Riemerella_unclassified 0.0 -
+Bacteria.Firmicutes.Clostridia.Clostridiales.Clostridiaceae.Clostridium.Clostridium_scindens 1.15705055502 4.22446256914e-08
+Viruses 3.39503290096 MetaHIT 3.02857862663 1.67930843129e-08
+Bacteria.Actinobacteria.Actinobacteria.Actinomycetales.Brevibacteriaceae 0.895902257773 0.00335428910734
+Bacteria.Firmicutes.Clostridia.Clostridiales.Clostridiaceae.Butyricicoccus.Butyricicoccus_pullicaecorum 0.34639249922 MetaHIT 3.25403022378 0.0050913470325
+Bacteria.Firmicutes.Bacilli.Lactobacillales.Lactobacillaceae.Lactobacillus.Lactobacillus_fermentum 2.08433069141 -
+Bacteria.Firmicutes.Bacilli.Lactobacillales.Lactobacillaceae 3.31593177484 MetaHIT 3.00017672234 0.000146440360391
+Bacteria.Proteobacteria.Deltaproteobacteria.Desulfovibrionales.Desulfovibrionaceae 3.53294871718 MetaHIT 3.16077739224 5.80955203023e-10
+Bacteria.Firmicutes.Bacilli.Lactobacillales.Leuconostocaceae.Leuconostoc.Leuconostoc_mesenteroides 0.561510904291 -
+Bacteria.Proteobacteria.Gammaproteobacteria.Pseudomonadales.Moraxellaceae.Acinetobacter.Acinetobacter_lwoffii 1.87434127294 -
+Bacteria.Firmicutes.Bacilli.Lactobacillales.Lactobacillaceae.Lactobacillus.Lactobacillus_helveticus 0.0 -
+Bacteria.Proteobacteria.Betaproteobacteria.Burkholderiales.Oxalobacteraceae.Candidatus_Zinderia 0.0 MetaHIT 3.45863823869 0.00753961701125
+Bacteria.Bacteroidetes.Bacteroidia.Bacteroidales.Rikenellaceae.Alistipes 4.92543665685 HMP 4.00697904731 0.0160039761437
+Bacteria.Tenericutes.Mollicutes.Entomoplasmatales 0.0 -
+Bacteria.Bacteroidetes.Bacteroidia.Bacteroidales.Porphyromonadaceae.Parabacteroides.Parabacteroides_sp_20_3 2.82844440761 -
+Archaea.Euryarchaeota.Methanobacteria.Methanobacteriales.Methanobacteriaceae.Methanosphaera 1.42896174455 0.0161479053958
+Bacteria.Firmicutes.Erysipelotrichia.Erysipelotrichales.Erysipelotrichaceae.Turicibacter.Turicibacter_sanguinis 2.00138191743 -
+Archaea.Euryarchaeota.Methanococci.Methanococcales.Methanocaldococcaceae.Methanocaldococcaceae_unclassified 1.22465598371 2.65110751199e-05
+Bacteria.Firmicutes.Bacilli.Lactobacillales.Lactobacillaceae.Lactobacillus.Lactobacillus_ultunensis 0.0 -
+Bacteria.Chlamydiae.Chlamydiia.Chlamydiales 0.0 -
+Bacteria.Verrucomicrobia.Verrucomicrobiae 4.0546495379 -
+Bacteria.Bacteroidetes.Bacteroidia.Bacteroidales.Porphyromonadaceae.Odoribacter.Odoribacter_laneus 3.16883650131 -
+Bacteria.Fusobacteria 2.59143226521 -
+Bacteria.Firmicutes.Clostridia.Clostridiales.Clostridiales_Family_XI_Incertae_Sedis.Peptoniphilus 0.383453712215 -
+Bacteria.Bacteroidetes.Bacteroidia.Bacteroidales.Porphyromonadaceae.Parabacteroides.Parabacteroides_unclassified 4.04503829351 MetaHIT 3.45064707995 4.29179582739e-07
+Bacteria.Firmicutes.Negativicutes.Selenomonadales.Veillonellaceae.Dialister.Dialister_invisus 4.30704865074 -
+Bacteria.Proteobacteria.Gammaproteobacteria.Enterobacteriales.Enterobacteriaceae.Citrobacter.Citrobacter_unclassified 0.642386224738 -
+Viruses.Viruses_noname.Viruses_noname.Viruses_noname.Retroviridae 1.69912788968 1.09144929131e-05
+Viruses.Viruses_noname.Viruses_noname.Viruses_noname.Microviridae.Microvirus.Enterobacteria_phage_phiX174_sensu_lato 2.08508506672 -
+Bacteria.Firmicutes.Clostridia.Clostridiales.Clostridiales_noname.Flavonifractor 2.35110499307 -
+Bacteria.Firmicutes.Negativicutes.Selenomonadales.Veillonellaceae.Veillonella 3.2026465325 -
+Bacteria.Firmicutes.Bacilli.Lactobacillales.Streptococcaceae.Streptococcus.Streptococcus_infantarius 0.0 -
+Bacteria.Bacteroidetes.Bacteroidia.Bacteroidales.Bacteroidaceae.Bacteroides.Bacteroides_coprophilus 3.41595792348 MetaHIT 3.0852713382 6.2658895852e-05
+Bacteria.Firmicutes.Clostridia.Clostridiales.Clostridiaceae.Clostridium.Clostridium_clostridioforme 1.76410061142 -
+Bacteria.Proteobacteria.Gammaproteobacteria.Aeromonadales.Succinivibrionaceae 1.88235204258 0.00753961701125
+Bacteria.Bacteroidetes.Flavobacteriia.Flavobacteriales.Flavobacteriaceae.Capnocytophaga.Capnocytophaga_unclassified 0.11663457382 -
+Bacteria.Firmicutes.Clostridia.Clostridiales.Peptostreptococcaceae.Peptostreptococcus.Peptostreptococcus_unclassified 0.378563062451 MetaHIT 3.21917347935 0.0216862523221
+Bacteria.Actinobacteria.Actinobacteria.Coriobacteriales.Coriobacteriaceae.Olsenella 1.83225078412 3.47665895139e-29
+Viruses.Viruses_noname.Viruses_noname.Viruses_noname.Potyviridae.Potyvirus 1.22874245913 3.3122847922e-10
+Viruses.Viruses_noname.Viruses_noname.Caudovirales.Siphoviridae.Siphoviridae_noname.Bacteroides_phage_B124_14 1.44875315168 -
+Bacteria.Bacteroidetes.Bacteroidia.Bacteroidales.Porphyromonadaceae.Parabacteroides.Parabacteroides_distasonis 4.33415814689 -
+Bacteria.Synergistetes 2.57133463097 -
+Viruses.Viruses_noname.Viruses_noname.Caudovirales.Siphoviridae.Siphoviridae_noname.Streptococcus_phage_Sfi21 1.29207698085 -
+Bacteria.Firmicutes.Negativicutes.Selenomonadales.Acidaminococcaceae.Acidaminococcus.Acidaminococcus_fermentans 2.35443829472 0.00149836161228
+Bacteria.Tenericutes.Mollicutes.Mycoplasmatales 0.598924277475 -
+Bacteria.Firmicutes.Clostridia.Clostridiales.Clostridiaceae.Clostridium 3.93451568774 -
+Bacteria.Firmicutes.Clostridia.Clostridiales.Clostridiales_Family_XIII_Incertae_Sedis 1.17047277361 0.0378836784739
+Bacteria.Bacteroidetes.Bacteroidia.Bacteroidales.Prevotellaceae.Prevotella.Prevotella_buccae 0.558247832046 MetaHIT 3.08825875555 0.0393019864501
+Bacteria.Firmicutes.Clostridia.Clostridiales.Lachnospiraceae.Butyrivibrio.Butyrivibrio_crossotus 4.52870968579 MetaHIT 4.10003834567 6.44648613104e-08
+Bacteria.Actinobacteria.Actinobacteria.Coriobacteriales.Coriobacteriaceae.Collinsella.Collinsella_tanakaei 1.08353355359 -
+Bacteria.Proteobacteria.Alphaproteobacteria.Rhizobiales.Bradyrhizobiaceae.Rhodopseudomonas.Rhodopseudomonas_palustris 0.0 -
+Viruses.Viruses_noname.Viruses_noname.Viruses_noname.Circoviridae.Gyrovirus 0.917171241493 -
+Viruses.Viruses_noname.Viruses_noname.Caudovirales.Podoviridae 1.39986588743 -
+Bacteria.Firmicutes.Bacilli.Lactobacillales.Leuconostocaceae.Leuconostoc.Leuconostoc_lactis 0.0 -
+Bacteria.Firmicutes.Bacilli.Lactobacillales.Lactobacillaceae.Lactobacillus.Lactobacillus_delbrueckii 0.803981009884 -
+Viruses.Viruses_noname.Viruses_noname.Caudovirales.Podoviridae.Epsilon15likevirus.Epsilon15likevirus_unclassified 0.0 -
+Bacteria.Candidatus_Saccharibacteria 0.179005983218 -
+Bacteria.Actinobacteria.Actinobacteria.Actinomycetales.Corynebacteriaceae.Corynebacterium 0.0 -
+Bacteria.Firmicutes.Clostridia.Clostridiales.Peptostreptococcaceae.Peptostreptococcaceae_noname 2.79246597635 6.76534150874e-07
+Bacteria.Bacteroidetes.Bacteroidia.Bacteroidales.Bacteroidaceae.Bacteroides.Bacteroides_sp_1_1_14 2.10906696215 -
+Bacteria.Bacteroidetes.Bacteroidia.Bacteroidales.Prevotellaceae.Paraprevotella.Paraprevotella_clara 3.53496312824 0.00290009958607
+Bacteria.Firmicutes.Bacilli.Lactobacillales.Enterococcaceae.Enterococcus 1.84049872704 -
+Viruses.Viruses_noname.Viruses_noname.Viruses_noname.Retroviridae.Gammaretrovirus 0.903856965539 -
+Bacteria.Actinobacteria.Actinobacteria.Coriobacteriales.Coriobacteriaceae.Collinsella.Collinsella_intestinalis 1.74150867622 -
+Bacteria.Actinobacteria.Actinobacteria.Actinomycetales.Micrococcaceae.Rothia 1.38026607603 6.01558493814e-05
+Bacteria.Firmicutes.Clostridia.Clostridiales.Lachnospiraceae.Anaerostipes.Anaerostipes_unclassified 0.603619398683 0.0380403225961
+Bacteria.Firmicutes.Clostridia.Clostridiales.Clostridiales_noname.Pseudoflavonifractor.Pseudoflavonifractor_capillosus 2.24500140378 1.81898208147e-13
+Bacteria.Proteobacteria.Gammaproteobacteria.Oceanospirillales.Hahellaceae.Hahellaceae_unclassified 0.0 -
+Bacteria.Firmicutes.Clostridia.Clostridiales.Lachnospiraceae.Dorea.Dorea_formicigenerans 3.30231496544 0.00135322158375
+Archaea.Euryarchaeota 3.52774078942 MetaHIT 3.217365929 2.37509692531e-05
+Bacteria.Spirochaetes.Spirochaetia.Spirochaetales 1.64634432136 -
+Bacteria.Proteobacteria.Betaproteobacteria.Neisseriales.Neisseriaceae.Neisseria.Neisseria_unclassified 0.0 -
+Bacteria.Firmicutes.Clostridia.Clostridiales.Clostridiales_Family_XI_Incertae_Sedis.Parvimonas.Parvimonas_unclassified 1.19208284539 -
+Bacteria.Firmicutes.Negativicutes.Selenomonadales.Acidaminococcaceae.Acidaminococcus 3.41006298704 -
+Bacteria.Firmicutes.Clostridia.Halanaerobiales.Halobacteroidaceae.Halobacteroidaceae_unclassified 1.02314849428 MetaHIT 3.28630055651 0.00149836161228
+Bacteria.Proteobacteria.Gammaproteobacteria.Enterobacteriales.Enterobacteriaceae.Enterobacter.Enterobacter_mori 0.0 -
+Bacteria.Firmicutes.Bacilli.Lactobacillales.Enterococcaceae 1.84049872704 -
+Archaea.Euryarchaeota.Methanococci.Methanococcales.Methanocaldococcaceae.Methanocaldococcus 0.186208349918 -
+Bacteria.Firmicutes.Erysipelotrichia.Erysipelotrichales.Erysipelotrichaceae.Erysipelotrichaceae_noname.Clostridium_ramosum 1.50538296525 0.021542528853
+Bacteria.Proteobacteria.Gammaproteobacteria.Enterobacteriales.Enterobacteriaceae.Providencia.Providencia_unclassified 0.490228135 -
+Bacteria.Bacteroidetes.Bacteroidia.Bacteroidales.Prevotellaceae.Paraprevotella.Paraprevotella_unclassified 3.7096711851 MetaHIT 3.04147219723 0.00192994291576
+Bacteria.Bacteroidetes.Bacteroidia.Bacteroidales.Porphyromonadaceae.Porphyromonas.Porphyromonas_uenonis 0.676265846718 -
+Bacteria.Firmicutes.Negativicutes.Selenomonadales.Veillonellaceae.Megasphaera.Megasphaera_unclassified 3.06738086852 1.23885183765e-05
+Bacteria.Firmicutes.Bacilli.Lactobacillales.Leuconostocaceae.Leuconostoc 0.83463258318 -
+Bacteria.Actinobacteria.Actinobacteria.Actinomycetales.Actinomycetaceae.Mobiluncus 0.0 -
+Viruses.Viruses_noname.Viruses_noname.Caudovirales.Siphoviridae.Siphoviridae_noname 3.22789449965 0.000689191768763
+Bacteria.Verrucomicrobia.Verrucomicrobiae.Verrucomicrobiales 4.0546495379 -
+Eukaryota.Ascomycota.Eurotiomycetes.Eurotiales.Aspergillaceae 0.0 -
+Bacteria.Firmicutes.Bacilli.Lactobacillales.Lactobacillaceae.Pediococcus.Pediococcus_unclassified 0.789195983527 -
+Bacteria.Firmicutes.Clostridia.Clostridiales.Eubacteriaceae.Eubacterium.Eubacterium_eligens 4.21919397628 MetaHIT 3.76215690556 0.000592988945897
+Bacteria.Firmicutes.Negativicutes.Selenomonadales.Acidaminococcaceae.Acidaminococcus.Acidaminococcus_sp_D21 1.71840011838 -
+Bacteria.Actinobacteria.Actinobacteria.Coriobacteriales.Coriobacteriaceae.Atopobium.Atopobium_vaginae 0.416152766517 -
+Bacteria.Actinobacteria.Actinobacteria.Actinomycetales.Dermatophilaceae.Dermatophilaceae_unclassified 1.085495992 0.00149836161228
+Archaea.Euryarchaeota.Methanobacteria.Methanobacteriales.Methanobacteriaceae.Methanobrevibacter 3.52388251127 MetaHIT 3.2177166482 7.86198447577e-06
+Bacteria.Chlorobi.Chlorobia.Chlorobiales 0.735227809265 0.000670338618477
+Bacteria.Proteobacteria.Gammaproteobacteria.Chromatiales.Ectothiorhodospiraceae.Spiribacter.Spiribacter_unclassified 0.429572832624 -
+Bacteria.Spirochaetes.Spirochaetia.Spirochaetales.Brachyspiraceae 1.64141402746 -
+Bacteria.Proteobacteria.Alphaproteobacteria.Rhizobiales.Bartonellaceae 1.26467475808 0.000133922718974
+Viruses.Viruses_noname.Viruses_noname.Caudovirales.Podoviridae.P22likevirus.P22likevirus_unclassified 0.0 -
+Bacteria.Acidobacteria.Acidobacteriia.Acidobacteriales.Acidobacteriaceae 1.83195376059 1.31015343009e-16
+Bacteria.Firmicutes.Clostridia.Clostridiales.Lachnospiraceae.Lachnospiraceae_noname.Lachnospiraceae_bacterium_3_1_57FAA_CT1 2.1615683499 -
+Bacteria.Firmicutes.Bacilli.Bacillales.Bacillales_noname.Gemella.Gemella_haemolysans 0.0 -
+Bacteria.Firmicutes.Erysipelotrichia.Erysipelotrichales.Erysipelotrichaceae.Catenibacterium 2.97971434493 -
+Bacteria.Firmicutes.Erysipelotrichia.Erysipelotrichales.Erysipelotrichaceae.Solobacterium.Solobacterium_moorei 0.963210104643 -
+Bacteria.Fusobacteria.Fusobacteriia.Fusobacteriales.Fusobacteriaceae.Fusobacterium.Fusobacterium_gonidiaformans 1.45972741906 -
+Bacteria.Firmicutes.Clostridia.Clostridiales.Peptostreptococcaceae.Peptostreptococcaceae_noname.Clostridium_hiranonis 0.393164731883 -
+Bacteria.Proteobacteria.Betaproteobacteria.Burkholderiales 3.98326548177 -
+Bacteria.Firmicutes.Clostridia.Clostridiales.Lachnospiraceae.Blautia.Blautia_hydrogenotrophica 1.67711438031 0.00110748211467
+Bacteria.Bacteroidetes.Bacteroidia.Bacteroidales.Marinilabiliaceae.Marinilabiliaceae_unclassified 0.0 -
+Bacteria.Firmicutes.Clostridia.Clostridiales.Ruminococcaceae.Anaerotruncus 3.42155091764 MetaHIT 3.10829501643 1.42182436455e-20
+Viruses.Viruses_noname.Viruses_noname.Viruses_noname.Retroviridae.Retroviridae_noname.Human_endogenous_retrovirus_K 1.59511749235 2.65110751199e-05
+Bacteria.Chlamydiae.Chlamydiia.Chlamydiales.Chlamydiaceae.Chlamydophila 0.0 -
+Bacteria.Firmicutes.Clostridia.Clostridiales.Oscillospiraceae.Oscillibacter 3.69234004597 MetaHIT 3.11432587593 0.000151042572789
+Bacteria.Firmicutes.Negativicutes.Selenomonadales.Veillonellaceae.Megamonas.Megamonas_unclassified 2.28263678127 -
+Bacteria.Proteobacteria.Gammaproteobacteria.Enterobacteriales.Enterobacteriaceae.Yersinia 0.0 MetaHIT 3.35753009127 0.0393019864501
+Archaea.Euryarchaeota.Methanococci.Methanococcales.Methanocaldococcaceae 1.26269072977 2.65110751199e-05
+Bacteria.Actinobacteria.Actinobacteria.Actinomycetales.Actinomycetaceae.Actinomyces.Actinomyces_viscosus 0.0 -
+Bacteria.Firmicutes.Clostridia.Clostridiales.Lachnospiraceae.Marvinbryantia 0.0216354156802 -
+Bacteria.Proteobacteria.Gammaproteobacteria.Enterobacteriales.Enterobacteriaceae.Escherichia.Escherichia_coli 3.89273179724 -
+Viruses.Viruses_noname.Viruses_noname.Viruses_noname.Papillomaviridae.Alphapapillomavirus.Alphapapillomavirus_10 1.2078871788 -
+Bacteria.Bacteroidetes.Bacteroidia.Bacteroidales.Prevotellaceae.Paraprevotella 4.06829180667 MetaHIT 3.39911802632 0.00149112460594
+Bacteria.Acidobacteria.Acidobacteriia 1.83195376059 1.31015343009e-16
+Bacteria.Proteobacteria.Gammaproteobacteria.Aeromonadales 1.88235204258 0.00753961701125
+Bacteria.Bacteroidetes.Bacteroidia.Bacteroidales.Rikenellaceae.Alistipes.Alistipes_finegoldii 3.68080216446 0.0262592797952
+Bacteria.Firmicutes.Clostridia.Clostridiales.Clostridiales_noname.Clostridiales_noname 3.07955140619 -
+Bacteria.Firmicutes.Clostridia.Clostridiales.Clostridiales_Family_XIII_Incertae_Sedis.Clostridiales_Family_XIII_Incertae_Sedis_noname 0.686224627887 0.00702404765416
+Bacteria.Bacteroidetes.Sphingobacteriia 2.07193033385 2.47589575774e-14
+Bacteria.Proteobacteria.Gammaproteobacteria.Enterobacteriales.Enterobacteriaceae.Shigella.Shigella_flexneri 0.0 -
+Bacteria.Proteobacteria.Alphaproteobacteria.Caulobacterales.Caulobacteraceae.Caulobacter.Caulobacter_unclassified 0.0 -
+Bacteria.Bacteroidetes.Bacteroidia.Bacteroidales.Porphyromonadaceae 4.99939100696 HMP 4.33474254679 1.45105732829e-06
+Bacteria.Fusobacteria.Fusobacteriia.Fusobacteriales.Fusobacteriaceae.Fusobacterium.Fusobacterium_periodonticum 0.0 -
+Bacteria.Proteobacteria.Gammaproteobacteria.Alteromonadales.Pseudoalteromonadaceae 0.807548737367 -
+Bacteria.Actinobacteria 4.1953333016 MetaHIT 3.77961882842 9.93245547217e-11
+Viruses.Viruses_noname.Viruses_noname.Caudovirales.Siphoviridae.Siphoviridae_noname.Leuconostoc_phage_phiLN04 1.78713832149 -
+Bacteria.Firmicutes.Clostridia.Clostridiales.Lachnospiraceae.Blautia.Blautia_hansenii 0.0 -
+Bacteria.Firmicutes.Erysipelotrichia.Erysipelotrichales.Erysipelotrichaceae.Erysipelotrichaceae_noname.Eubacterium_dolichum 2.07791661988 0.000434657656033
+Bacteria.Bacteroidetes.Bacteroidia.Bacteroidales.Bacteroidaceae.Bacteroides.Bacteroides_sp_2_1_22 3.99381381987 HMP 3.6672392833 0.000444255039269
+Bacteria 5.99648115286 HMP 4.81570178626 2.1727890156e-21
diff --git a/examples/hmp_metahit/metahit.txt b/examples/hmp_metahit/metahit.txt
new file mode 100644
index 0000000..b6d6ce6
--- /dev/null
+++ b/examples/hmp_metahit/metahit.txt
@@ -0,0 +1,264 @@
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diff --git a/examples/hmp_metahit_functional/PIPELINE.sh b/examples/hmp_metahit_functional/PIPELINE.sh
new file mode 100755
index 0000000..be86748
--- /dev/null
+++ b/examples/hmp_metahit_functional/PIPELINE.sh
@@ -0,0 +1,88 @@
+# !/bin/bash
+
+########################################################################################################################
+# The following lines of code contains all the steps for downloading the HMP and MetaHIT data, process it through #
+# MetaPhlAn2, perform the functional analysis using HUMAnN, merging the functional profiles by means of an ad-hoc #
+# python script provided inside the hmp_metahit_functional folder, process the merged dataset with LEfSe for #
+# biomarkers discovery, exploit the export2graphlan framework for generating the tree and the annotation file for #
+# GraPhlAn, and finally draw the image using GraPhlAn. #
+# For time reasons, we provide the two intermediate files: the merge of the two datasets (HMP & MetaHIT) and the #
+# results of LEfSE. #
+# If the user wants to test the complete pipeline, it is enough to uncommet all the commented part. #
+########################################################################################################################
+
+# # remove the generated files, if any
+# echo "Removing files"
+# rm -f merge.txt stool/* merge-good.txt merge-good-1.txt merge-good-2.txt merge-good-3.txt merge.txt merge.txt.in \
+# merge.txt.out tree.txt annot.txt outtree.txt outimg.png
+
+# # set MetaPhlAn2 directory
+# mpa_dir=`$HOME/metaphlan2`
+
+# # download samples
+# echo "Downloading HMP stool samples"
+# mkdir stool
+# cd stool/
+# for i in SRS011239 SRS013215 SRS013476 SRS014459 SRS015065 SRS056259 SRS058770 SRS062427 SRS063985 SRS015854 SRS016203 \
+# SRS016335 SRS017307 SRS017701 SRS018656 SRS019161 SRS019968 SRS020233 SRS020328 SRS022609 SRS023583 SRS024265 \
+# SRS047044 SRS052697 SRS053214 SRS015190 SRS015217 SRS015578 SRS015663 SRS016056 SRS016989 SRS017191 SRS017433 \
+# SRS018351 SRS018427 SRS018984 SRS019582 SRS019601 SRS022071 SRS022137 SRS024009 SRS024132 SRS024549 SRS024625 \
+# SRS043001 SRS045004 SRS045713 SRS050422 SRS050925 SRS051031 SRS011405 SRS011529 SRS011586 SRS012902 SRS014923 \
+# SRS055982 SRS011084 SRS011134 SRS011452 SRS013951 SRS014613 SRS014979 SRS054956 SRS057717 SRS058723 SRS064557 \
+# SRS064645 SRS065504 SRS015264 SRS015782 SRS015960 SRS016495 SRS016517 SRS017103 SRS018313 SRS018575 SRS019267 \
+# SRS019787 SRS019910 SRS020869 SRS021484 SRS023176 SRS023526 SRS023971 SRS024331 SRS024435 SRS048870 SRS049900 \
+# SRS049959 SRS049995 SRS050299 SRS050752 SRS052027 SRS011302 SRS012273 SRS013158 SRS014313 SRS015133 SRS053335 \
+# SRS054590 SRS063040 SRS077730 SRS078176 SRS015369 SRS015890 SRS016018 SRS016095 SRS016753 SRS016954 SRS017521 \
+# SRS017821 SRS018133 SRS019030 SRS019685 SRS022713 SRS023829 SRS024388 SRS042628 SRS047014 SRS048164 SRS049712 \
+# SRS051882 SRS011061 SRS011271 SRS013521 SRS013687 SRS013800 SRS014235 SRS014287 SRS014683 SRS053398 SRS056519 \
+# SRS057478 SRS064276 SRS075398 SRS015431 SRS015794 SRS016267 SRS016585 SRS017247 SRS018817 SRS019068 SRS019381 \
+# SRS019397 SRS021948 SRS022524 SRS023346 SRS023914 SRS024075 SRS042284 SRS043411 SRS043701 SRS045645 SRS049164; do
+
+# wget ftp://public-ftp.hmpdacc.org/Illumina/stool/${i}.tar.bz2 # download
+# tar jxf -d ${i}.tar.bz2 # decompress
+# cat ${i}/* > ${i}.fastq
+# metaphlan2.py ${i}.fastq --mpa_pkl ${mpa_dir}/db_v20/mpa_v20_m200.pkl --bowtie2db ${mpa_dir}/db_v20/mpa_v20_m200 \
+# --input_type fastq > ${i}.profile
+# done
+
+# echo "Downloading MetaHIT healthy stool samples"
+# for i in `cat ../metahit_download.txt`; do
+# s=`echo ${i} | cut -f1`
+# u=`echo ${i} | cut -f2`
+
+# for j in `echo ${u} | tr ';' '\n'`; do
+# f=`echo ${j} | cut -f6 -d'/'`
+# ff=`echo ${f} | cut -f1-2 -d'.'`
+
+# wget ftp://${j} # download
+# gunzip ${f} # decompress
+# cat ${ff} >> ../${s}.fastq # cat forward and reverse
+# done
+
+# metaphlan2.py ../${s}.fastq --mpa_pkl ${mpa_dir}/db_v20/mpa_v20_m200.pkl --bowtie2db ${mpa_dir}/db_v20/mpa_v20_m200 \
+# --input_type fastq > ../${s}.profile
+# done
+# cd ../
+
+# # HUMAnN
+# # execute scons in the stool/ folder
+
+# # merge HUMAnN output files
+# echo "Merging HUMAnN files"
+# ./merge-humann.py hmp.txt 17 metahit.txt 10 metahit_map.txt merge.txt
+
+# # execute LEfSe
+# echo "Running LEfSe"
+# format_input.py merge.txt merge.txt.in -c 1 -o 1000000
+# run_lefse.py -l 3.0 merge.txt.in merge.txt.out
+
+# convert it!
+echo "Converting to GraPhlAn"
+export2graphlan.py -i merge.txt -o merge.txt.out -t tree.txt -a annot.txt --title "Functional pathways" \
+--abundance_threshold 45.5 --external_annotations 3 --ftop 125 --internal_levels --max_clade_size 600 --min_clade_size 40 \
+--background_clades "Metabolism.Metabolism_of_Cofactors_and_Vitamins, Metabolism.Carbohydrate_Metabolism, Metabolism.Amino_Acid_Metabolism, Metabolism.Metabolism_of_Terpenoids_and_Polyketides, Metabolism.Metabolism_of_Other_Amino_Acids, Genetic_Information_Processing.Replication_and_Repair, Environmental_Information_Processing.Membrane_Transport" \
+--background_colors "(150.; 100.; 100.), (55.; 100.; 100.), (280.; 80.; 88.)"
+
+echo "Running Graphlan"
+graphlan_annotate.py --annot annot.txt tree.txt outtree.txt # attach annotation to the tree
+graphlan.py --dpi 300 --size 7.0 outtree.txt image2.svg # generate the beautiful image
diff --git a/examples/hmp_metahit_functional/hmp.txt b/examples/hmp_metahit_functional/hmp.txt
new file mode 100644
index 0000000..4378278
--- /dev/null
+++ b/examples/hmp_metahit_functional/hmp.txt
@@ -0,0 +1,315 @@
+NAME SRS011061_vs_KEGG_v54-mpt-nul-nul-nul-nul-nul SRS011090_vs_KEGG_v54-mpt-nul-nul-nul-nul-nul SRS011098_vs_KEGG_v54-mpt-nul-nul-nul-nul-nul SRS011126_vs_KEGG_v54-mpt-nul-nul-nul-nul-nul SRS011132_vs_KEGG_v54-mpt-nul-nul-nul-nul-nul SRS011134_vs_KEGG_v54-mpt-nul-nul-nul-nul-nul SRS011140_vs_KEGG_v54-mpt-nul-nul-nul-nul-nul SRS011144_vs_KEGG_v54-mpt-nul-nul-nul-nul-nul SRS011152_vs_KEGG_v54-mpt-nul-nul-nul-nul-nul SRS011239_vs_KEGG_v54-mpt-nul-nul-nul-nul-nul SRS011243_vs_KEGG_v54-mpt-n [...]
+RANDSID 158458797 158458797 158458797 158479027 158479027 158499257 158499257 158499257 158499257 158742018 158742018 158742018 158742018 158742018 158742018 158802708 158944319 158944319 158944319 158944319 158944319 158984779 159247771 159146620 159166850 159247771 159733294 158337416 158337416 158337416 158337416 158337416 158337416 158398106 159571453 159369152 159369152 159369152 159591683 159591683 159591683 159591683 159591683 159207311 159207311 159207311 159227541 159227541 1592 [...]
+START Q1_2009 Q1_2009 Q1_2009 Q1_2009 Q1_2009 Q1_2009 Q1_2009 Q1_2009 Q1_2009 Q1_2009 Q1_2009 Q1_2009 Q1_2009 Q1_2009 Q1_2009 Q1_2009 Q1_2009 Q1_2009 Q1_2009 Q1_2009 Q1_2009 Q1_2009 Q2_2009 Q1_2009 Q2_2009 Q2_2009 Q2_2009 Q1_2009 Q1_2009 Q1_2009 Q1_2009 Q1_2009 Q1_2009 Q1_2009 Q2_2009 Q2_2009 Q2_2009 Q2_2009 Q2_2009 Q2_2009 Q2_2009 Q2_2009 Q2_2009 Q2_2009 Q2_2009 Q2_2009 Q2_2009 Q2_2009 Q2_2009 Q2_2009 Q2_2009 Q2_2009 Q2_2009 Q2_2009 Q2_2009 Q2_2009 Q2_2009 Q2_2009 Q1_2009 Q1_2009 Q1_200 [...]
+SITE Houston Houston Houston Houston Houston Houston Houston Houston Houston Houston Houston Houston Houston Houston Houston Houston Houston Houston Houston Houston Houston Houston Houston Houston Houston Houston Houston Houston Houston Houston Houston Houston Houston Houston Houston Houston Houston Houston Houston Houston Houston Houston Houston Houston Houston Houston Houston Houston Houston Houston Houston Houston Houston Houston Houston Houston Houston Houston St. Louis St. Louis St. [...]
+GENDER female female female male male male male male male female female female female female female male female female female female female female female male male female female female female female female female female male male male male male male male male male male male male male female female female male male male male male male male male male male male male male male male male male male male male male male female female male male male female female female female female female femal [...]
+VISNO 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 2 2 2 2 2 2 2 2 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 2 2 2 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 [...]
+STSite Stool Buccal_mucosa Supragingival_plaque Supragingival_plaque Anterior_nares Stool Tongue_dorsum Buccal_mucosa Supragingival_plaque Stool Tongue_dorsum Buccal_mucosa Supragingival_plaque Anterior_nares Posterior_fornix Stool Stool Tongue_dorsum Buccal_mucosa Supragingival_plaque Posterior_fornix Anterior_nares Stool Stool Stool Posterior_fornix Stool Stool Tongue_dorsum Buccal_mucosa Supragingival_plaque Anterior_nares Posterior_fornix Anterior_nares Anterior_nares Stool Tongue_do [...]
+StudyDay_Processed 27 29 29 28 28 27 29 29 29 7 7 7 7 7 7 6 8 8 8 12 12 3 2 7 1 2 1 14 14 14 14 14 14 20 1 3 3 3 1 1 1 1 1 1 1 1 1 1 1 8 1 1 1 1 1 1 1 1 1 2 2 2 2 2 2 2 2 2 2 2 2 2 2 8 0 12 2 3 3 3 3 3 3 3 3 3 3 3 3 3 1 1 1 1 1 3 3 3 3 3 3 3 3 3 7 7 7 7 7 5 6 6 6 6 6 39 39 39 39 39 39 39 39 39 39 39 6 1 1 1 1 6 6 6 6 2 2 2 2 2 2 2 2 2 2 2 1 1 1 1 1 1 1 1 1 1 2 2 2 2 2 5 5 5 5 5 85 85 85 85 85 41 9 9 9 9 2 2 2 2 9 9 9 9 9 6 6 6 6 6 6 6 6 6 6 7 7 7 7 7 7 2 2 2 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 [...]
+Current_site 95BIS 95BIS 95BIS 95BIS 95BIS 95BIS 95BIS 95BIS 95BIS 95BIS 95BIS 95BIS 95BIS 95BIS 95BIS 94WAS 95BIS 95BIS 95BIS 95BIS 95BIS 95BIS 94WAS 94WAS 94WAS 94WAS 94WAS 95BIS 95BIS 95BIS 95BIS 95BIS 95BIS 95BIS 95BIS 95BIS 95BIS 95BIS 95BIS 95BIS 95BIS 95BIS 95BIS 95BIS 95BIS 95BIS 93BAS 93BAS 93BAS 95BIS 95BIS 95BIS 95BIS 95BIS 95BIS 95BIS 95BIS 95BIS 94WAS 94WAS 94WAS 94WAS 94WAS 94WAS 94WAS 94WAS 94WAS 94WAS 94WAS 94WAS 94WAS 94WAS 94WAS 94WAS 94WAS 94WAS 94WAS 94WAS 94WAS 94WAS [...]
+Parent_Specimen 700014555 700014737 700014749 700014791 700014797 700014832 700014911 700014913 700014917 700015179 700015197 700015203 700015215 700015233 700015242 700015245 700015394 700015428 700015434 700015550 700015577 700015756 700015979 700016136 700016608 700033042 700033130 700013715 700013721 700013723 700013727 700013733 700013736 700014445 700015784 700015857 700015863 700015869 700015940 700015946 700015958 700015964 700015976 700016456 700016462 700016464 700016542 700016 [...]
+Run ID 61NLYAAXX 61JGYAAXX 61G9GAAXX 61G97AAXX 61GT9AAXX 61JGUAAXX 61G8MAAXX 61HJPAAXX 61GT9AAXX 61JHCAAXX 61JDGAAXX 61JCUAAXX 61JEWAAXX 61JGUAAXX 61JBRAAXX 61PNF 61JBRAAXX 61JC8AAXX 61G9GAAXX 61JDGAAXX 61KYVAAXX 61JCUAAXX 61PNF 61WER 61PNF 620H4 61M9L 61JFTAAXX 61JFTAAXX 61GWBAAXX 61GWBAAXX 61JFTAAXX 61GWBAAXX 61KYJAAXX 61JHCAAXX 61JCRAAXX 61JDMAAXX 61JD0AAXX 61JEYAAXX 61GT5AAXX 61JD6AAXX 61U73AAXX 61JFDAAXX 61JENAAXX 61JDHAAXX 61JDRAAXX 61VYM 61VYR 61VYR 61KTPAAXX 61NNNAAXX 61JDDAAXX 6 [...]
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+Number of Quality Bases 5159843791 6387064158 4829329518 5872200289 6436282718 6210952530 5427874072 5316591003 6065119796 6633196152 5080384909 5857844769 5936281948 6536545743 6556053199 6480024746 6814095108 6231032139 5300868222 4489708853 3621291754 5594306732 6487625140 2749895648 6605008593 5460421834 6359569738 5870477010 6144262720 6303308434 5739917840 5783482683 6105238473 6167227706 6020124811 6149969613 5441662007 5955139967 5835181698 6153689510 5580780832 4037373623 594449 [...]
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+Metabolism.Metabolism_of_Cofactors_and_Vitamins.Pantothenate_and_CoA_biosynthesis_ko00770 0.013886215 0.0160551646 0.0169299146 0.0147651697 0.0148635911 0.013739 0.016442733 0.0162273459 0.0158787227 0.0135505862 0.0167816523 0.0159605866 0.0154147854 0.0132403304 0.0102272228 0.0143180583 0.0148021738 0.016873178 0.0157825376 0.0160959378 0.0105065733 0.0161377416 0.013754455 0.0128546546 0.0139948088 0.0083751122 0.0131224381 0.0134666583 0.0160605942 0.0149277611 0.0153351033 0.01354 [...]
+Cellular_Processes.Cell_Motility.Flagellar_assembly_ko02040 0.0010351728 0.0004244376 0.0005892747 0.0040549453 0.0002719782 0.002974456 0.0010706316 0.0017681673 0.0016009227 0.0008295532 0.0003928334 0.0004361232 0.0027091996 0.0001504743 2.95611990522e-05 0.0038433889 0.0009358379 0.0016320664 0.0003717701 0.0019076497 7.61760886185e-05 0.000454116 0.0014939442 0.0008433418 0.0020373557 1.33088583697e-05 0.0013252132 0.0015381586 0.0015009337 0.0005967092 0.0022364854 0.0003320604 8.4 [...]
+Organismal_Systems.Endocrine_System.GnRH_signaling_pathway_ko04912 1.52525088304e-05 8.79544894248e-06 7.35413049294e-05 5.87544270814e-05 6.55590056897e-05 2.86933495931e-05 1.76683178673e-05 2.39702920195e-05 4.13864503065e-05 1.19786793863e-05 9.32158148214e-06 9.18203013776e-06 6.58733308116e-05 0.0002049695 3.41474800071e-06 2.8726937835e-05 3.44000813783e-05 1.242578795e-05 7.36203504335e-06 4.05587684351e-05 2.38692531379e-05 9.27192597134e-05 1.06098522963e-05 9.04321789884e-06 2 [...]
+Metabolism.Amino_Acid_Metabolism.Valine_leucine_and_isoleucine_degradation_ko00280 0.0043708798 0.0030309902 0.005327453 0.0047704127 0.0058645666 0.0036757769 0.0034888797 0.0031437414 0.0044056924 0.003983415 0.0031109134 0.0033319824 0.0046221336 0.0073187823 0.0026154308 0.0029201358 0.0031430959 0.0039566683 0.0030616331 0.0035669232 0.0018363038 0.0058907808 0.0039932749 0.0045687311 0.0031890163 0.0024669722 0.0034284821 0.0037637694 0.0039393512 0.0033754268 0.0046230564 0.006992 [...]
+Environmental_Information_Processing.Signal_Transduction.mTOR_signaling_pathway_ko04150 3.48283643658e-05 6.17377871298e-06 6.97868287113e-05 6.56079463321e-05 9.68141774161e-05 4.16154674011e-05 1.92274041984e-05 6.74523427255e-05 3.63717179895e-05 2.99681786973e-05 1.09897243192e-05 9.50289626467e-06 7.53340574189e-05 0.0001724222 4.86984836858e-06 2.80506754894e-05 6.67334520926e-05 1.4993347942e-05 6.11513859729e-06 3.58730126707e-05 1.29014276296e-08 4.3921116174e-05 2.71563320148e- [...]
+Organismal_Systems.Endocrine_System.Adipocytokine_signaling_pathway_ko04920 0.0020454526 0.0003092208 0.0023898371 0.0019035642 0.0021751527 0.0016540186 0.0010181042 0.0009355396 0.0015668074 0.0018227068 0.0014565783 0.0004250678 0.0019452619 0.0023967721 0.0003586089 0.0017336462 0.00110635 0.001124717 0.0003805369 0.0016237753 2.62860166218e-06 0.001617881 0.0023516625 0.0020746565 0.0018752279 9.92845349446e-05 0.0016861065 0.0016663474 0.001257678 0.0004847932 0.0017200551 0.001823 [...]
+Metabolism.Lipid_Metabolism.Primary_bile_acid_biosynthesis_ko00120 0.0023368764 2.80815069172e-05 2.81845353576e-05 6.70089510163e-05 0.0001049539 0.0030351415 2.34777145518e-05 6.15738780102e-05 3.29697232442e-05 0.0027211157 1.77733189375e-05 1.39152877988e-05 6.51452612029e-05 0.0002428361 0.0008051226 0.0015798687 0.0029472613 4.29352867547e-05 7.75253530578e-06 2.69283059443e-05 0.0028395619 8.05440433346e-05 0.0035519032 0.0034610138 0.0017920531 0.0001602246 0.0028813132 0.0022461 [...]
+Organismal_Systems.Digestive_System.Carbohydrate_digestion_and_absorption_ko04973 0.0005328219 0.0031755947 0.0010399024 0.000883622 0.0007365824 0.0010404922 0.0011608048 0.0017134737 0.0012066556 0.0005910551 0.0005891423 0.002749477 0.0010382016 0.0009754641 0.0003351172 0.0007185585 0.0003609374 0.0008321227 0.0028054191 0.0009324792 9.43719120111e-05 0.0016956696 0.0003979198 0.0003520028 0.0005812089 0.0002917573 0.0010497824 0.000890487 0.0007301816 0.0029119422 0.0009439245 0.000 [...]
+Human_Diseases.Infectious_Diseases.Hepatitis_C_ko05160 2.74203065561e-05 8.809095734e-06 4.24659628469e-05 4.77378832956e-05 7.57799492343e-05 3.15206644169e-05 1.184625896e-05 1.99226190398e-05 3.41034462849e-05 1.79951765271e-05 6.16262899526e-06 5.96290249574e-06 4.26165953428e-05 0.0001470597 1.56536954089e-05 2.12194831143e-05 3.94142086765e-05 1.27290957446e-05 2.19314440558e-06 2.87127228175e-05 1.95931377303e-06 1.99534848637e-05 2.7233154087e-05 2.60087703193e-05 2.76328419436e- [...]
+Human_Diseases.Cardiovascular_Diseases.Dilated_cardiomyopathy_DCM__ko05414 7.44948972852e-06 4.8068080724e-06 5.24984846295e-05 4.66822527729e-05 2.34152529986e-05 1.3505387264e-05 1.77362262982e-05 1.16512338842e-05 2.91779237389e-05 7.56578138528e-06 1.01639749004e-05 3.7394041012e-06 3.46545698616e-05 4.98570900387e-05 1.54452020451e-06 9.8944990733e-06 1.5732696462e-05 1.15036301633e-05 2.18236271453e-06 2.49133707181e-05 6.51198088778e-06 2.02785451452e-05 4.97515209467e-06 1.028757 [...]
+Metabolism.Xenobiotics_Biodegradation_and_Metabolism.Caprolactam_degradation_ko00930 0.0005204644 0.0026557868 0.0014092103 0.0019125627 0.0034291764 0.0005899513 0.0017687139 0.0018898098 0.0017744047 0.0003923625 0.0009964532 0.0025184675 0.0018448742 0.0040607186 0.0017739669 0.0004433356 0.0005833816 0.001518 0.0024654583 0.0013443099 0.0003134809 0.0033445814 0.0003217396 0.0004455835 0.0004487328 0.0023493564 0.0005498348 0.0007972094 0.0013132868 0.0023916234 0.0016571595 0.003526 [...]
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diff --git a/examples/hmp_metahit_functional/merge-humann.py b/examples/hmp_metahit_functional/merge-humann.py
new file mode 100755
index 0000000..d92d191
--- /dev/null
+++ b/examples/hmp_metahit_functional/merge-humann.py
@@ -0,0 +1,163 @@
+#!/usr/bin/env python
+
+from sys import argv
+
+
+if __name__ == "__main__":
+
+ try:
+ argv[1]
+ argv[2]
+ argv[3]
+ argv[4]
+ argv[5]
+ argv[6]
+ except:
+ print "Usage error!"
+ print "$ python merge_humann.py <in_hmp> <skip_rows_hmp> <in_metahit> <skip_rows_metahit> <metahit_map> <out_file>"
+ exit(1)
+
+ infile1 = str(argv[1])
+ infile2 = str(argv[3])
+ metahit_map = str(argv[5])
+ outfile = str(argv[6])
+
+ skip1 = int(argv[2])
+ skip2 = int(argv[4])
+
+ dataset1 = 'HMP'
+ dataset2 = 'MetaHIT'
+
+ file1 = []
+ file2 = []
+ donel = []
+ hmp_bodysites = []
+ metahit_ids = []
+
+ # read the first file, save it into a list skipping the given rows
+ i = 0
+ with open(infile1, 'r') as f:
+ for l in f:
+ if i < skip1:
+ if l.startswith('STSite'):
+ hmp_bodysites = l.strip().split()[1:]
+
+ i += 1
+ else:
+ file1.append(l.strip().split())
+
+ # filter the HMP dataset at Stool bodysite
+ i = 0
+ stool_list = []
+ hmp = []
+
+ for b in hmp_bodysites:
+ if b == 'Stool':
+ stool_list.append(i)
+
+ i += 1
+
+ for l in file1:
+ lst = []
+
+ for i in stool_list:
+ lst.append(l[i])
+
+ hmp.append(lst)
+
+ # read the second file, save it into a list skipping the given rows
+ i = 0
+ with open(infile2,'r') as f:
+ for l in f:
+ if i < skip2:
+ if l.startswith('ID'):
+ metahit_ids = l.strip().split()[1:]
+
+ i += 1
+ else:
+ file2.append(l.strip().split())
+
+ # get just the healty MetaHIT samples
+ hlist = ['ERS006486', 'ERS006487', 'ERS006488', 'ERS006489', 'ERS006490', 'ERS006491', 'ERS006493', 'ERS006494',
+ 'ERS006495', 'ERS006496', 'ERS006497', 'ERS006498', 'ERS006499', 'ERS006500', 'ERS006501', 'ERS006503', 'ERS006504',
+ 'ERS006505', 'ERS006506', 'ERS006507', 'ERS006508', 'ERS006511', 'ERS006513', 'ERS006514', 'ERS006516', 'ERS006517',
+ 'ERS006519', 'ERS006525', 'ERS006527', 'ERS006528', 'ERS006529', 'ERS006530', 'ERS006531', 'ERS006532', 'ERS006533',
+ 'ERS006534', 'ERS006535', 'ERS006536', 'ERS006537', 'ERS006538', 'ERS006540', 'ERS006541', 'ERS006542', 'ERS006544',
+ 'ERS006547', 'ERS006548', 'ERS006549', 'ERS006550', 'ERS006551', 'ERS006552', 'ERS006553', 'ERS006554', 'ERS006555',
+ 'ERS006556', 'ERS006557', 'ERS006558', 'ERS006560', 'ERS006561', 'ERS006562', 'ERS006564', 'ERS006565', 'ERS006568',
+ 'ERS006569', 'ERS006570', 'ERS006571', 'ERS006573', 'ERS006578', 'ERS006579', 'ERS006580', 'ERS006581', 'ERS006584',
+ 'ERS006585', 'ERS006586', 'ERS006588', 'ERS006589', 'ERS006590', 'ERS006592', 'ERS006593', 'ERS006596', 'ERS006597',
+ 'ERS006600', 'ERS006601', 'ERS006604', 'ERS006607', 'ERS006608', 'ERS006566', 'ERS006559', 'ERS006574', 'ERS006526',
+ 'ERS006539', 'ERS006599', 'ERS006602', 'ERS006524', 'ERS006587', 'ERS006545', 'ERS006575', 'ERS006510', 'ERS006594',
+ 'ERS006492']
+ healthy = []
+
+ # read mapping metahit input file
+ with open(metahit_map, 'r') as f:
+ for row in f:
+ ers_id, real = row.strip().split()
+
+ # keep only healthy
+ if ers_id in hlist:
+ healthy.append(real)
+
+ # remove from the MetaHIT samples the non-healthy ones
+ i = 0
+ filter_list = []
+ metahit = []
+
+ for j in metahit_ids:
+ for h in healthy:
+ if h in j:
+ filter_list.append(i)
+
+ i += 1
+
+ for l in file2:
+ lst = [l[0]]
+
+ for i in filter_list:
+ lst.append(l[i])
+
+ metahit.append(lst)
+
+ # write the output file
+ with open(outfile, 'w') as f:
+ # write the dataset information
+ f.write(''.join(['\t'.join(['dataset', '\t'.join([dataset1 for i in range(len(hmp[0]) - 1)]),
+ '\t'.join([dataset2 for i in range(len(metahit[0]) - 1)])]),
+ '\n']))
+
+ # at the end of this for the output file will contains all the hmp, together with the ones shared with metahit
+ for l1 in hmp:
+ m1 = l1[0].replace('.', '|')
+ done = False
+
+ for l2 in metahit:
+ m2 = l2[0].replace('.', '|')
+
+ if m1 == m2: # both dataset has the same row
+ taxa = m1[:m1.rfind('_')]
+ f.write(''.join(['\t'.join([taxa, '\t'.join([i for i in l1[1:]]),
+ '\t'.join([i for i in l2[1:]])]),
+ '\n']))
+ donel.append(m1)
+ done = True
+ break
+
+ if not done: # the second dataset misses the row
+ taxa = m1[:m1.rfind('_')]
+ f.write(''.join(['\t'.join([taxa, '\t'.join([str(i) for i in l1[1:]]),
+ '\t'.join(['0.0' for i in range(len(metahit[0]) - 1)])]),
+ '\n']))
+ donel.append(m1)
+
+ # look for the ignored rows in metahit
+ for l2 in metahit:
+ m2 = l2[0].replace('.', '|')
+
+ if m2 not in donel: # the first dataset misses the row
+ taxa = m2[:m2.rfind('_')]
+ f.write(''.join(['\t'.join([taxa, '\t'.join(['0.0' for i in range(len(hmp[0]) - 1)]),
+ '\t'.join([str(i) for i in l2[1:]])]),
+ '\n']))
diff --git a/examples/hmp_metahit_functional/merge.txt b/examples/hmp_metahit_functional/merge.txt
new file mode 100644
index 0000000..23ebb4d
--- /dev/null
+++ b/examples/hmp_metahit_functional/merge.txt
@@ -0,0 +1,302 @@
+dataset HMP HMP HMP HMP HMP HMP HMP HMP HMP HMP HMP HMP HMP HMP HMP HMP HMP HMP HMP HMP HMP HMP HMP HMP HMP HMP HMP HMP HMP HMP HMP HMP HMP HMP HMP HMP HMP HMP HMP HMP HMP HMP HMP HMP HMP HMP HMP HMP HMP HMP HMP HMP HMP HMP HMP HMP HMP HMP HMP HMP HMP HMP HMP HMP HMP HMP HMP HMP HMP HMP HMP HMP HMP HMP HMP HMP HMP HMP HMP HMP HMP HMP HMP HMP HMP HMP HMP HMP HMP HMP HMP HMP HMP HMP HMP HMP HMP HMP HMP HMP HMP HMP HMP HMP HMP HMP HMP HMP HMP HMP HMP HMP HMP HMP HMP HMP HMP HMP HMP HMP HMP [...]
+Human_Diseases|Immune_System_Diseases|Primary_immunodeficiency 0.0015944327 0.0013832385 0.0031482006 0.0014995355 0.0013162229 0.0012663533 0.0011099486 0.0032158726 0.0017882644 0.0011344414 0.0014055392 0.0013022471 0.0014846185 0.0013546653 0.0016190215 0.0011412954 0.0017410844 0.001238586 0.0013143465 0.001407052 0.0009655909 0.001115498 0.0010307377 0.0017924918 0.0023513154 0.0027124443 0.0012429471 0.002296408 0.0013857748 0.0014692001 0.0015126964 0.0016250997 0.0011263254 0.00 [...]
+Metabolism|Lipid_Metabolism|Glycerophospholipid_metabolism 0.0054295023 0.0066394964 0.006382436 0.004327423 0.0056927403 0.0043999989 0.0040550879 0.0060665918 0.0043668177 0.0052933495 0.004668634 0.0063373545 0.0052824972 0.0054888922 0.0055654711 0.0063698348 0.0054139191 0.0043175775 0.0042720975 0.0059895994 0.0047434711 0.0051541944 0.004689969 0.0055791764 0.0070927628 0.0068464821 0.0057964682 0.007731784 0.0055008124 0.0054930277 0.0060731164 0.0064072671 0.0052874891 0.0063809 [...]
+Metabolism|Energy_Metabolism|Methane_metabolism 0.0039831496 0.0044837672 0.0065501985 0.0043713846 0.0039124361 0.004694083 0.0045595213 0.0068392058 0.0053157868 0.0039996337 0.0036434021 0.0039749118 0.0036825789 0.0045232143 0.0045386684 0.0031912639 0.0046286673 0.004988475 0.0050628738 0.0042555354 0.0039348454 0.0033240283 0.0051714853 0.0040570081 0.0057466017 0.0061694156 0.0044575539 0.0056063488 0.0039725162 0.0042588283 0.0041303643 0.0048033585 0.002911576 0.0041334092 0.003 [...]
+Metabolism|Carbohydrate_Metabolism|Inositol_phosphate_metabolism 0.0045194118 0.0025525341 0.0017717182 0.0022834932 0.0029642583 0.002299529 0.0021319311 0.0016947121 0.0020016665 0.0037142351 0.0041266135 0.0021427116 0.0044137948 0.0023055754 0.0029162729 0.0019045133 0.0023113044 0.0018052224 0.0019213601 0.0027641645 0.0040939488 0.0049421221 0.0023186609 0.0037727559 0.0016440848 0.0012456549 0.0020510501 0.0020708895 0.0032043162 0.0027688833 0.0029393225 0.0028902417 0.0054751472 [...]
+Metabolism|Glycan_Biosynthesis_and_Metabolism|Glycosylphosphatidylinositol_GPI_anchor_biosynthesis 0.0001709556 4.73697613904e-05 2.11147289015e-05 1.09405822946e-05 1.9664487313e-05 2.87259021307e-05 2.89538200558e-05 8.27908311796e-06 3.43754747811e-05 0.0001726743 0.0001839255 2.17853509971e-05 0.0002490514 5.4859398875e-05 3.70437313618e-05 3.54963217184e-06 1.72995285483e-05 2.81074035521e-05 1.37028634295e-05 6.37853886995e-05 0.000363493 0.00193005 2.3288660754e-05 0.0001232663 5. [...]
+Human_Diseases|Infectious_Diseases|Bacterial_invasion_of_epithelial_cells 0.0001211115 0.0001540798 3.71022584687e-06 1.64159280294e-05 4.83804013803e-05 2.36228108172e-05 6.47213675624e-05 1.01263603808e-05 3.02675413281e-05 0.0001064748 0.0001623238 7.33613133388e-06 0.0002582799 0.0001961461 0.0003120736 6.87447173627e-06 9.07299889035e-05 5.61655728749e-05 2.52009401011e-05 0.0001940039 0.0003899352 0.0016426383 5.82328375129e-05 0.0004625559 8.91306096797e-06 1.6698570375e-06 0.0002 [...]
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diff --git a/examples/hmp_metahit_functional/merge.txt.out b/examples/hmp_metahit_functional/merge.txt.out
new file mode 100644
index 0000000..38dfbeb
--- /dev/null
+++ b/examples/hmp_metahit_functional/merge.txt.out
@@ -0,0 +1,344 @@
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+Human_Diseases.Neurodegenerative_Diseases.Huntington_s_disease 2.81844674013 1.62552789764e-38
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+Metabolism.Xenobiotics_Biodegradation_and_Metabolism.Metabolism_of_xenobiotics_by_cytochrome_P450 3.34471027859 HMP 3.03904303698 2.54976201155e-41
+Metabolism.Glycan_Biosynthesis_and_Metabolism.Various_types_of_N_glycan_biosynthesis 1.98120927262 2.76506574666e-26
+Metabolism.Energy_Metabolism.Nitrogen_metabolism 3.76725297777 0.0031320123541
+Human_Diseases.Infectious_Diseases.Chagas_disease_American_trypanosomiasis_ 2.27121114204 9.91494639924e-27
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+Metabolism.Amino_Acid_Metabolism.Lysine_degradation 3.40101039063 1.94735452371e-07
+Environmental_Information_Processing.Signal_Transduction.Phosphatidylinositol_signaling_system 3.34423026436 HMP 3.04450249521 4.81099475604e-42
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+Organismal_Systems.Excretory_System.Proximal_tubule_bicarbonate_reclamation 3.35661300208 HMP 3.05901132265 2.29737920769e-40
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+Metabolism.Metabolism_of_Cofactors_and_Vitamins.Lipoic_acid_metabolism 4.13695603114 HMP 3.36887578458 3.47661808613e-14
+Metabolism.Glycan_Biosynthesis_and_Metabolism.Lipopolysaccharide_biosynthesis 4.06729155963 MetaHIT 3.31526924309 5.30393210647e-08
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+Organismal_Systems.Environmental_Adaptation.Circadian_rhythm_mammal 2.04167446992 4.90895297207e-28
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+Human_Diseases.Neurodegenerative_Diseases.Prion_diseases 2.38019128454 2.50019543343e-11
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+Metabolism.Glycan_Biosynthesis_and_Metabolism.N_Glycan_biosynthesis 3.33844792037 7.93042210812e-36
+Metabolism.Metabolism_of_Terpenoids_and_Polyketides.Biosynthesis_of_12_14_and_16_membered_macrolides 1.19309112649 0.011873952385
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+Genetic_Information_Processing.Folding_Sorting_and_Degradation.Sulfur_relay_system 4.24100717631 MetaHIT 3.56105623304 2.85653273757e-38
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+Metabolism 5.88457007878 HMP 3.8906659544 1.52849777619e-10
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+Organismal_Systems.Endocrine_System.Insulin_signaling_pathway 2.98801841028 4.11160862501e-26
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+Environmental_Information_Processing.Membrane_Transport.ABC_transporters 3.89484632404 2.57029154988e-14
+Human_Diseases.Cancers.Prostate_cancer 2.48787444223 4.81099475604e-42
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+Human_Diseases.Cancers.Renal_cell_carcinoma 2.83838515056 4.81099475604e-42
+Organismal_Systems.Development.Dorso_ventral_axis_formation 2.08105718617 3.85796887794e-14
+Genetic_Information_Processing 5.26100143093 MetaHIT 4.35198909602 2.96113131501e-34
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+Environmental_Information_Processing.Signal_Transduction.MAPK_signaling_pathway 1.89881272578 1.46824867718e-29
+Environmental_Information_Processing.Signal_Transduction.Two_component_system 3.84340552133 MetaHIT 3.31340878183 5.42505669802e-39
+Metabolism.Amino_Acid_Metabolism.Valine_leucine_and_isoleucine_biosynthesis 4.39218895042 HMP 3.33414012771 9.38577929973e-15
+Human_Diseases.Metabolic_Diseases 3.64154657242 HMP 3.3409365057 1.73428971511e-41
+Organismal_Systems.Nervous_System.Neurotrophin_signaling_pathway 2.00709677884 1.43430303526e-37
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+Metabolism.Carbohydrate_Metabolism.Citrate_cycle_TCA_cycle_ 4.06560516851 HMP 3.03113487194 6.28293990042e-15
+Environmental_Information_Processing.Signal_Transduction.MAPK_signaling_pathway_yeast 3.01054451962 2.69035495007e-19
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+Organismal_Systems 4.22290929513 HMP 3.88712460488 5.42505669802e-39
+Environmental_Information_Processing.Signaling_Molecules_and_Interaction.Cytokine_cytokine_receptor_interaction 1.26971049621 4.81099475604e-42
+Human_Diseases.Cancers.Thyroid_cancer 1.88456832894 1.50396690651e-41
+Human_Diseases.Infectious_Diseases.Pathogenic_Escherichia_coli_infection 2.53279620292 1.62734785895e-12
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+Genetic_Information_Processing.Folding_Sorting_and_Degradation 4.67720312981 MetaHIT 3.8648562206 8.17777204861e-39
+Genetic_Information_Processing.Transcription.RNA_polymerase 3.94014224165 1.30501295476e-16
+Metabolism.Xenobiotics_Biodegradation_and_Metabolism.Drug_metabolism_cytochrome_P450 3.38558755326 HMP 3.08014205978 4.81099475604e-42
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+Metabolism.Glycan_Biosynthesis_and_Metabolism.Glycosphingolipid_biosynthesis_globo_series 3.60209534704 HMP 3.30681504647 2.01998533328e-38
+Organismal_Systems.Sensory_System.Olfactory_transduction 2.29306300531 4.14320084047e-29
+Organismal_Systems.Immune_System.Fc_epsilon_RI_signaling_pathway 1.90927909493 4.81099475604e-42
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+Metabolism.Xenobiotics_Biodegradation_and_Metabolism.Ethylbenzene_degradation 3.72060795715 HMP 3.41849679261 6.04002103639e-42
+Human_Diseases.Infectious_Diseases.Bacterial_invasion_of_epithelial_cells 2.30420958142 1.91038027645e-28
+Human_Diseases.Immune_System_Diseases.Rheumatoid_arthritis 0.103209246763 -
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+Metabolism.Metabolism_of_Terpenoids_and_Polyketides.Geraniol_degradation 3.42367143249 8.86743095259e-26
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+Metabolism.Lipid_Metabolism.Ether_lipid_metabolism 2.77159217883 2.21815943421e-07
+Metabolism.Lipid_Metabolism.Primary_bile_acid_biosynthesis 2.92076641011 6.91717318191e-36
+Metabolism.Xenobiotics_Biodegradation_and_Metabolism 4.80464603217 HMP 4.3303791167 5.42505669802e-39
+Human_Diseases.Metabolic_Diseases.Type_II_diabetes_mellitus 3.18175342831 4.81099475604e-42
+Metabolism.Metabolism_of_Terpenoids_and_Polyketides.Carotenoid_biosynthesis 2.43471260349 4.59702898456e-08
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+Organismal_Systems.Immune_System.B_cell_receptor_signaling_pathway 1.91383697468 1.57116446237e-37
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+Metabolism.Biosynthesis_of_Other_Secondary_Metabolites.Flavone_and_flavonol_biosynthesis 2.66899716189 4.35345984486e-40
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+Human_Diseases 4.23301737417 HMP 3.88713477341 5.42505669802e-39
+Metabolism.Carbohydrate_Metabolism.Starch_and_sucrose_metabolism 4.10423558974 MetaHIT 3.2017784458 9.56744107417e-24
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+Human_Diseases.Neurodegenerative_Diseases.Parkinson_s_disease 2.66893029739 1.66274063009e-36
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+Human_Diseases.Cardiovascular_Diseases.Hypertrophic_cardiomyopathy_HCM_ 1.47213963043 2.54851060112e-24
+Metabolism.Xenobiotics_Biodegradation_and_Metabolism.Fluorobenzoate_degradation 2.26998905091 2.23658484516e-39
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+Human_Diseases.Infectious_Diseases.Vibrio_cholerae_pathogenic_cycle 3.17346211924 6.51402512404e-36
+Metabolism.Metabolism_of_Other_Amino_Acids.D_Alanine_metabolism 4.40255351302 HMP 3.51071367099 1.09717946562e-07
+Human_Diseases.Cancers.Small_cell_lung_cancer 1.69016308734 4.81099475604e-42
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+Genetic_Information_Processing.Folding_Sorting_and_Degradation.Proteasome 2.71501965226 8.45561756717e-12
+Human_Diseases.Infectious_Diseases.African_trypanosomiasis 2.49170633365 1.60784648364e-39
+Metabolism.Metabolism_of_Cofactors_and_Vitamins.Nicotinate_and_nicotinamide_metabolism 4.17096880963 MetaHIT 3.44746078218 6.01175895203e-39
+Organismal_Systems.Sensory_System.Phototransduction_fly 2.0164311543 2.08061048891e-34
+Human_Diseases.Cancers.Glioma 1.97190867599 1.50396690651e-41
+Genetic_Information_Processing.Folding_Sorting_and_Degradation.SNARE_interactions_in_vesicular_transport 2.06603549646 1.05401432781e-35
+Organismal_Systems.Immune_System.NOD_like_receptor_signaling_pathway 2.58204276261 1.0904638636e-39
+Human_Diseases.Cancers.Chronic_myeloid_leukemia 1.86762173174 4.81099475604e-42
+Human_Diseases.Immune_System_Diseases.Systemic_lupus_erythematosus 2.36336721833 1.11258682159e-36
+Metabolism.Xenobiotics_Biodegradation_and_Metabolism.Chloroalkane_and_chloroalkene_degradation 3.69441390736 -
+Metabolism.Biosynthesis_of_Other_Secondary_Metabolites.Caffeine_metabolism 0.920740000352 3.81321399615e-34
diff --git a/examples/hmp_metahit_functional/metahit.txt b/examples/hmp_metahit_functional/metahit.txt
new file mode 100644
index 0000000..e86793e
--- /dev/null
+++ b/examples/hmp_metahit_functional/metahit.txt
@@ -0,0 +1,268 @@
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+cohort cohort Denmark Denmark Denmark Denmark Denmark Denmark Denmark Denmark Denmark Denmark Denmark Denmark Denmark Denmark Denmark Denmark Denmark Denmark Denmark Denmark Denmark Denmark Denmark Denmark Denmark Denmark Denmark Denmark Denmark Denmark Denmark Denmark Denmark Denmark Denmark Denmark Denmark Denmark Denmark Denmark Denmark Denmark Denmark Denmark Denmark Denmark Denmark Denmark Denmark Denmark Denmark Denmark Denmark Denmark Denmark Denmark Denmark Denmark Denmark Denmar [...]
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diff --git a/examples/hmp_metahit_functional/metahit_download.txt b/examples/hmp_metahit_functional/metahit_download.txt
new file mode 100644
index 0000000..b6d6ce6
--- /dev/null
+++ b/examples/hmp_metahit_functional/metahit_download.txt
@@ -0,0 +1,264 @@
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diff --git a/examples/hmp_metahit_functional/metahit_map.txt b/examples/hmp_metahit_functional/metahit_map.txt
new file mode 100644
index 0000000..7629f1a
--- /dev/null
+++ b/examples/hmp_metahit_functional/metahit_map.txt
@@ -0,0 +1,124 @@
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diff --git a/examples/internal_labels/annot_0.txt b/examples/internal_labels/annot_0.txt
new file mode 100644
index 0000000..4fbe09f
--- /dev/null
+++ b/examples/internal_labels/annot_0.txt
@@ -0,0 +1,22 @@
+
+#this is the first annotation text file and it shows the main characteristics of our tree. ALL OF THEESE OPTIONS ARE GLOBAL EVENTHOUGH YOU DON'T SPECIFY WHOM ARE REFERRED TO!
+
+#clade_separation is used to specify the distace between the clades
+clade_separation 0.7
+
+#branch_thickness is used to set the thickness of branch
+branch_thickness 1.50
+
+# this is the position of the branch
+branch_bracket_depth 0.8
+
+
+#to specify the size of the clade
+clade_marker_size 40
+
+#you can choose the colour of the clade's edge line
+clade_marker_edge_color #555555
+clade_marker_edge_width 0.5
+
+#the width of the branch bracket
+branch_bracket_width 0.5
diff --git a/examples/internal_labels/annot_1.txt b/examples/internal_labels/annot_1.txt
new file mode 100644
index 0000000..8ef8de3
--- /dev/null
+++ b/examples/internal_labels/annot_1.txt
@@ -0,0 +1,99 @@
+
+# clade_marker_laber is used to give to a clade its own number. (Theese are specific options because are referred to the plot of the tree)
+p__Archaea_noname.c__Archaea_noname clade_marker_label 1
+p__Crenarchaeota.c__Crenarchaeota_noname clade_marker_label 1
+p__Crenarchaeota.c__Thermoprotei clade_marker_label 57
+p__Euryarchaeota.c__Archaeoglobi clade_marker_label 4
+p__Euryarchaeota.c__Euryarchaeota_noname clade_marker_label 3
+p__Euryarchaeota.c__Halobacteria clade_marker_label 89
+p__Euryarchaeota.c__Methanobacteria clade_marker_label 13
+p__Euryarchaeota.c__Methanococci clade_marker_label 18
+p__Euryarchaeota.c__Methanomicrobia clade_marker_label 28
+p__Euryarchaeota.c__Methanopyri clade_marker_label 1
+p__Euryarchaeota.c__Nanohaloarchaea clade_marker_label 1
+p__Euryarchaeota.c__Thermococci clade_marker_label 17
+p__Euryarchaeota.c__Thermoplasmata clade_marker_label 4
+p__Korarchaeota.c__Korarchaeota_noname clade_marker_label 1
+p__Nanoarchaeota.c__Nanoarchaeota_noname clade_marker_label 1
+p__Thaumarchaeota.c__Thaumarchaeota_noname clade_marker_label 11
+p__Archaea_noname.c__Archaea_noname.o__Archaea_noname.f__Archaea_noname clade_marker_label 1
+p__Crenarchaeota.c__Crenarchaeota_noname.o__Crenarchaeota_noname.f__Crenarchaeota_noname clade_marker_label 1
+p__Crenarchaeota.c__Thermoprotei.o__Acidilobales.f__Acidilobaceae clade_marker_label 1
+p__Crenarchaeota.c__Thermoprotei.o__Acidilobales.f__Caldisphaeraceae clade_marker_label 1
+p__Crenarchaeota.c__Thermoprotei.o__Desulfurococcales.f__Desulfurococcaceae clade_marker_label 10
+p__Crenarchaeota.c__Thermoprotei.o__Desulfurococcales.f__Pyrodictiaceae clade_marker_label 2
+p__Crenarchaeota.c__Thermoprotei.o__Fervidicoccales.f__Fervidicoccaceae clade_marker_label 1
+p__Crenarchaeota.c__Thermoprotei.o__Sulfolobales.f__Sulfolobaceae clade_marker_label 30
+p__Crenarchaeota.c__Thermoprotei.o__Thermoproteales.f__Thermofilaceae clade_marker_label 1
+p__Crenarchaeota.c__Thermoprotei.o__Thermoproteales.f__Thermoproteaceae clade_marker_label 11
+p__Euryarchaeota.c__Archaeoglobi.o__Archaeoglobales.f__Archaeoglobaceae clade_marker_label 4
+p__Euryarchaeota.c__Euryarchaeota_noname.o__Euryarchaeota_noname.f__Euryarchaeota_noname clade_marker_label 3
+p__Euryarchaeota.c__Halobacteria.o__Halobacteriales.f__Halobacteriaceae clade_marker_label 89
+p__Euryarchaeota.c__Methanobacteria.o__Methanobacteriales.f__Methanobacteriaceae clade_marker_label 12
+p__Euryarchaeota.c__Methanobacteria.o__Methanobacteriales.f__Methanothermaceae clade_marker_label 1
+p__Euryarchaeota.c__Methanococci.o__Methanococcales.f__Methanocaldococcaceae clade_marker_label 8
+p__Euryarchaeota.c__Methanococci.o__Methanococcales.f__Methanococcaceae clade_marker_label 10
+p__Euryarchaeota.c__Methanomicrobia.o__Methanocellales.f__Methanocellaceae clade_marker_label 3
+p__Euryarchaeota.c__Methanomicrobia.o__Methanomicrobiales.f__Methanocorpusculaceae clade_marker_label 1
+p__Euryarchaeota.c__Methanomicrobia.o__Methanomicrobiales.f__Methanomicrobiaceae clade_marker_label 5
+p__Euryarchaeota.c__Methanomicrobia.o__Methanomicrobiales.f__Methanoregulaceae clade_marker_label 4
+p__Euryarchaeota.c__Methanomicrobia.o__Methanomicrobiales.f__Methanospirillaceae clade_marker_label 1
+p__Euryarchaeota.c__Methanomicrobia.o__Methanomicrobia_noname.f__Methanomicrobia_noname clade_marker_label 1
+p__Euryarchaeota.c__Methanomicrobia.o__Methanosarcinales.f__Methanosaetaceae clade_marker_label 3
+p__Euryarchaeota.c__Methanomicrobia.o__Methanosarcinales.f__Methanosarcinaceae clade_marker_label 10
+p__Euryarchaeota.c__Methanopyri.o__Methanopyrales.f__Methanopyraceae clade_marker_label 1
+p__Euryarchaeota.c__Nanohaloarchaea.o__Nanohaloarchaea_noname.f__Nanohaloarchaea_noname clade_marker_label 1
+p__Euryarchaeota.c__Thermococci.o__Thermococcales.f__Thermococcaceae clade_marker_label 17
+p__Euryarchaeota.c__Thermoplasmata.o__Thermoplasmatales.f__Ferroplasmaceae clade_marker_label 1
+p__Euryarchaeota.c__Thermoplasmata.o__Thermoplasmatales.f__Picrophilaceae clade_marker_label 1
+p__Euryarchaeota.c__Thermoplasmata.o__Thermoplasmatales.f__Thermoplasmataceae clade_marker_label 2
+p__Korarchaeota.c__Korarchaeota_noname.o__Korarchaeota_noname.f__Korarchaeota_noname clade_marker_label 1
+p__Nanoarchaeota.c__Nanoarchaeota_noname.o__Nanoarchaeota_noname.f__Nanoarchaeota_noname clade_marker_label 1
+p__Thaumarchaeota.c__Thaumarchaeota_noname.o__Cenarchaeales.f__Cenarchaeaceae clade_marker_label 1
+p__Thaumarchaeota.c__Thaumarchaeota_noname.o__Nitrosopumilales.f__Nitrosopumilaceae clade_marker_label 9
+p__Thaumarchaeota.c__Thaumarchaeota_noname.o__Nitrososphaerales.f__Nitrososphaeraceae clade_marker_label 1
+p__Archaea_noname.c__Archaea_noname.o__Archaea_noname clade_marker_label 1
+p__Crenarchaeota.c__Crenarchaeota_noname.o__Crenarchaeota_noname clade_marker_label 1
+p__Crenarchaeota.c__Thermoprotei.o__Acidilobales clade_marker_label 2
+p__Crenarchaeota.c__Thermoprotei.o__Desulfurococcales clade_marker_label 12
+p__Crenarchaeota.c__Thermoprotei.o__Fervidicoccales clade_marker_label 1
+p__Crenarchaeota.c__Thermoprotei.o__Sulfolobales clade_marker_label 30
+p__Crenarchaeota.c__Thermoprotei.o__Thermoproteales clade_marker_label 12
+p__Euryarchaeota.c__Archaeoglobi.o__Archaeoglobales clade_marker_label 4
+p__Euryarchaeota.c__Euryarchaeota_noname.o__Euryarchaeota_noname clade_marker_label 3
+p__Euryarchaeota.c__Halobacteria.o__Halobacteriales clade_marker_label 89
+p__Euryarchaeota.c__Methanobacteria.o__Methanobacteriales clade_marker_label 13
+p__Euryarchaeota.c__Methanococci.o__Methanococcales clade_marker_label 18
+p__Euryarchaeota.c__Methanomicrobia.o__Methanocellales clade_marker_label 3
+p__Euryarchaeota.c__Methanomicrobia.o__Methanomicrobiales clade_marker_label 11
+p__Euryarchaeota.c__Methanomicrobia.o__Methanomicrobia_noname clade_marker_label 1
+p__Euryarchaeota.c__Methanomicrobia.o__Methanosarcinales clade_marker_label 13
+p__Euryarchaeota.c__Methanopyri.o__Methanopyrales clade_marker_label 1
+p__Euryarchaeota.c__Nanohaloarchaea.o__Nanohaloarchaea_noname clade_marker_label 1
+p__Euryarchaeota.c__Thermococci.o__Thermococcales clade_marker_label 17
+p__Euryarchaeota.c__Thermoplasmata.o__Thermoplasmatales clade_marker_label 4
+p__Korarchaeota.c__Korarchaeota_noname.o__Korarchaeota_noname clade_marker_label 1
+p__Nanoarchaeota.c__Nanoarchaeota_noname.o__Nanoarchaeota_noname clade_marker_label 1
+p__Thaumarchaeota.c__Thaumarchaeota_noname.o__Cenarchaeales clade_marker_label 1
+p__Thaumarchaeota.c__Thaumarchaeota_noname.o__Nitrosopumilales clade_marker_label 9
+p__Thaumarchaeota.c__Thaumarchaeota_noname.o__Nitrososphaerales clade_marker_label 1
+
+#to change the size (clade_marker_size) and the colour (clade_marker_font_color) of the clade and its number
+p__Archaea_noname clade_marker_label 1
+p__Crenarchaeota clade_marker_label 58
+p__Euryarchaeota clade_marker_label 178
+p__Euryarchaeota clade_marker_size 350
+p__Korarchaeota clade_marker_label 1
+p__Nanoarchaeota clade_marker_label 1
+p__Thaumarchaeota clade_marker_label 11
+clade_marker_size 200
+clade_marker_font_size 9
+clade_marker_font_color white
+clade_marker_color black
+clade_marker_edge_color #000000
+
+
+
+
+
+
diff --git a/examples/internal_labels/annot_2.txt b/examples/internal_labels/annot_2.txt
new file mode 100644
index 0000000..2864be9
--- /dev/null
+++ b/examples/internal_labels/annot_2.txt
@@ -0,0 +1,36 @@
+#to set the the thickness of the border of the clade
+clade_marker_edge_width 0.5
+
+#to annotate a label (here we annote to each phylum its name)
+p__Euryarchaeota annotation Euryarchaeota
+p__Crenarchaeota annotation Crenarchaeota
+p__Korarchaeota annotation Korarchaeota
+p__Nanoarchaeota annotation Nanoarchaeota
+p__Thaumarchaeota annotation Thaumarchaeota
+p__Archaea_noname annotation Archaea noname
+
+#a general option for the size of the label
+annotation_font_size 5
+p__Euryarchaeota annotation_font_size 10
+p__Crenarchaeota annotation_font_size 10
+p__Korarchaeota annotation_font_size 7
+p__Nanoarchaeota annotation_font_size 7
+p__Thaumarchaeota annotation_font_size 8
+p__Archaea_noname annotation_font_size 7
+
+#to set the background's colour for each phylum
+p__Euryarchaeota annotation_background_color INDIGO
+p__Crenarchaeota annotation_background_color BLUE
+p__Korarchaeota annotation_background_color ROYALBLUE
+p__Nanoarchaeota annotation_background_color DODGERBLUE
+p__Thaumarchaeota annotation_background_color TEAL
+p__Archaea_noname annotation_background_color LIGHTSEAGREEN
+
+# to set the color for the clades of each phylum
+p__Euryarchaeota clade_marker_color INDIGO
+p__Crenarchaeota clade_marker_color BLUE
+p__Korarchaeota clade_marker_color ROYALBLUE
+p__Nanoarchaeota clade_marker_color DODGERBLUE
+p__Thaumarchaeota clade_marker_color TEAL
+p__Archaea_noname clade_marker_color LIGHTSEAGREEN
+
diff --git a/examples/internal_labels/annot_3.txt b/examples/internal_labels/annot_3.txt
new file mode 100644
index 0000000..d1ec171
--- /dev/null
+++ b/examples/internal_labels/annot_3.txt
@@ -0,0 +1,239 @@
+#to change the rotation of the plot's tree
+total_plotted_degrees 320
+start_rotation 270
+
+#to change the thickness of the edge line that divides one ring to another
+ring_internal_separator_thickness 1 0.6
+ring_external_separator_thickness 1 0.6
+ring_internal_separator_thickness 2 0.6
+ring_internal_separator_thickness 3 0.6
+ring_internal_separator_thickness 4 0.6
+ring_internal_separator_thickness 5 0.6
+
+#to set the height and the width of each ring
+ring_width 1 0.5
+ring_width 2 0.6
+ring_width 3 0.7
+ring_width 4 0.8
+ring_width 5 0.1
+ring_height 1 0.75
+ring_height 2 0.75
+ring_height 3 0.75
+ring_height 4 0.75
+ring_height 5 0.75
+
+#we put a label to specify what the ring rapresents
+ring_label 1 16S rRNA Count
+ring_label 2 tRNA Count
+ring_label 3 GC%
+ring_label 4 CDS Count
+ring_label 5 Genome Size (Base pairs)
+
+#to set the colour of the ring
+ring_color 1 green
+ring_color 2 blue
+ring_color 3 orange
+ring_color 4 red
+ring_color 5 grey
+
+#ring_alpha is used to set the intensity of the colour (i.e. 0.0 invisible and 1.0 visible).
+p__Crenarchaeota.c__Thermoprotei.o__Acidilobales.f__Acidilobaceae ring_alpha 1 0.25
+p__Crenarchaeota.c__Thermoprotei.o__Acidilobales.f__Caldisphaeraceae ring_alpha 1 0.25
+p__Crenarchaeota.c__Thermoprotei.o__Desulfurococcales.f__Desulfurococcaceae ring_alpha 1 0.25
+p__Crenarchaeota.c__Thermoprotei.o__Desulfurococcales.f__Pyrodictiaceae ring_alpha 1 0.25
+p__Crenarchaeota.c__Thermoprotei.o__Fervidicoccales.f__Fervidicoccaceae ring_alpha 1 0.25
+p__Crenarchaeota.c__Thermoprotei.o__Sulfolobales.f__Sulfolobaceae ring_alpha 1 0.25
+p__Crenarchaeota.c__Thermoprotei.o__Sulfolobales.f__Sulfolobales_noname ring_alpha 1 0.25
+p__Crenarchaeota.c__Thermoprotei.o__Thermoproteales.f__Thermofilaceae ring_alpha 1 0.25
+p__Crenarchaeota.c__Thermoprotei.o__Thermoproteales.f__Thermoproteaceae ring_alpha 1 0.25
+p__Euryarchaeota.c__Archaeoglobi.o__Archaeoglobales.f__Archaeoglobaceae ring_alpha 1 0.25
+p__Euryarchaeota.c__Thermoplasmata.o__Thermoplasmatales.f__Ferroplasmaceae ring_alpha 1 0.25
+p__Euryarchaeota.c__Halobacteria.o__Halobacteriales.f__Halobacteriaceae ring_alpha 1 0.4734042553
+p__Euryarchaeota.c__Methanobacteria.o__Methanobacteriales.f__Methanobacteriaceae ring_alpha 1 0.4545454545
+p__Euryarchaeota.c__Methanobacteria.o__Methanobacteriales.f__Methanothermaceae ring_alpha 1 0.5
+p__Euryarchaeota.c__Methanococci.o__Methanococcales.f__Methanococcaceae ring_alpha 1 0.65
+p__Euryarchaeota.c__Methanococci.o__Methanococcales.f__Methanocaldococcaceae ring_alpha 1 0.5
+p__Euryarchaeota.c__Methanomicrobia.o__Methanocellales.f__Methanocellaceae ring_alpha 1 0.5833333333
+p__Euryarchaeota.c__Methanomicrobia.o__Methanomicrobiales.f__Methanocorpusculaceae ring_alpha 1 0.5
+p__Euryarchaeota.c__Methanomicrobia.o__Methanomicrobiales.f__Methanomicrobiaceae ring_alpha 1 0.375
+p__Euryarchaeota.c__Methanomicrobia.o__Methanomicrobiales.f__Methanoregulaceae ring_alpha 1 0.375
+p__Euryarchaeota.c__Methanomicrobia.o__Methanosarcinales.f__Methanosaetaceae ring_alpha 1 0.4166666667
+p__Euryarchaeota.c__Methanomicrobia.o__Methanosarcinales.f__Methanosarcinaceae ring_alpha 1 0.7
+p__Euryarchaeota.c__Methanomicrobia.o__Methanomicrobiales.f__Methanospirillaceae ring_alpha 1 1
+p__Euryarchaeota.c__Methanomicrobia.o__Methanomicrobia_noname.f__Methanomicrobia_noname ring_alpha 1 0.25
+p__Euryarchaeota.c__Methanopyri.o__Methanopyrales.f__Methanopyraceae ring_alpha 1 0.25
+p__Euryarchaeota.c__Thermococci.o__Thermococcales.f__Thermococcaceae ring_alpha 1 0.25
+p__Euryarchaeota.c__Thermoplasmata.o__Thermoplasmatales.f__Picrophilaceae ring_alpha 1 0.25
+p__Euryarchaeota.c__Thermoplasmata.o__Thermoplasmatales.f__Thermoplasmataceae ring_alpha 1 0.25
+p__Euryarchaeota.c__Euryarchaeota_noname.o__Euryarchaeota_noname.f__Euryarchaeota_noname ring_alpha 1 0.25
+p__Euryarchaeota.c__Halobacteria.o__Halobacteria_noname.f__Halobacteria_noname ring_alpha 1 0.25
+p__Euryarchaeota.c__Halobacteria.o__Halobacteriales.f__Halobacteria_noname ring_alpha 1 0.375
+p__Euryarchaeota.c__Euryarchaeota_noname.o__Euryarchaeota_noname.f__Halobacteria_noname ring_alpha 1 0.25
+p__Nanoarchaeota.c__Nanoarchaeota_noname.o__Nanoarchaeota_noname.f__Nanoarchaeota_noname ring_alpha 1 1
+p__Korarchaeota.c__Korarchaeota_noname.o__Korarchaeota_noname.f__Korarchaeota_noname ring_alpha 1 0.25
+p__Thaumarchaeota.c__Thaumarchaeota_noname.o__Cenarchaeales.f__Cenarchaeaceae ring_alpha 1 0.25
+p__Thaumarchaeota.c__Thaumarchaeota_noname.o__Nitrosopumilales.f__Nitrosopumilaceae ring_alpha 1 0.2857142857
+p__Thaumarchaeota.c__Thaumarchaeota_noname.o__Nitrososphaerales.f__Nitrososphaeraceae ring_alpha 1 0.25
+p__Thaumarchaeota.c__Thaumarchaeota_noname.o__Thaumarchaeota_noname.f__Thaumarchaeota_noname ring_alpha 1 0.25
+
+p__Crenarchaeota.c__Thermoprotei.o__Acidilobales.f__Acidilobaceae ring_alpha 2 0.7627118644
+p__Crenarchaeota.c__Thermoprotei.o__Acidilobales.f__Caldisphaeraceae ring_alpha 2 1
+p__Crenarchaeota.c__Thermoprotei.o__Desulfurococcales.f__Desulfurococcaceae ring_alpha 2 0.8474576271
+p__Crenarchaeota.c__Thermoprotei.o__Desulfurococcales.f__Pyrodictiaceae ring_alpha 2 0.7796610169
+p__Crenarchaeota.c__Thermoprotei.o__Fervidicoccales.f__Fervidicoccaceae ring_alpha 2 0.7118644068
+p__Crenarchaeota.c__Thermoprotei.o__Sulfolobales.f__Sulfolobaceae ring_alpha 2 0.7796610169
+p__Crenarchaeota.c__Thermoprotei.o__Sulfolobales.f__Sulfolobales_noname ring_alpha 2 0.76271186
+p__Crenarchaeota.c__Thermoprotei.o__Thermoproteales.f__Thermofilaceae ring_alpha 2 0.66101695
+p__Crenarchaeota.c__Thermoprotei.o__Thermoproteales.f__Thermoproteaceae ring_alpha 2 0.7005649718
+p__Crenarchaeota.c__Crenarchaeota_noname.o__Crenarchaeota_noname.f__Crenarchaeota_noname ring_alpha 2 0.5494350282
+p__Euryarchaeota.c__Archaeoglobi.o__Archaeoglobales.f__Archaeoglobaceae ring_alpha 2 0.7966101695
+p__Euryarchaeota.c__Thermoplasmata.o__Thermoplasmatales.f__Ferroplasmaceae ring_alpha 2 0.74576271
+p__Euryarchaeota.c__Halobacteria.o__Halobacteriales.f__Halobacteriaceae ring_alpha 2 0.8279841327
+p__Euryarchaeota.c__Methanobacteria.o__Methanobacteriales.f__Methanobacteriaceae ring_alpha 2 0.7118644068
+p__Euryarchaeota.c__Methanobacteria.o__Methanobacteriales.f__Methanothermaceae ring_alpha 2 0.69491525
+p__Euryarchaeota.c__Methanococci.o__Methanococcales.f__Methanococcaceae ring_alpha 2 0.6186440678
+p__Euryarchaeota.c__Methanococci.o__Methanococcales.f__Methanocaldococcaceae ring_alpha 2 0.6165254237
+p__Euryarchaeota.c__Methanomicrobia.o__Methanocellales.f__Methanocellaceae ring_alpha 2 0.8305084746
+p__Euryarchaeota.c__Methanomicrobia.o__Methanomicrobiales.f__Methanocorpusculaceae ring_alpha 2 0.8559322034
+p__Euryarchaeota.c__Methanomicrobia.o__Methanomicrobiales.f__Methanomicrobiaceae ring_alpha 2 0.8192090395
+p__Euryarchaeota.c__Methanomicrobia.o__Methanomicrobiales.f__Methanoregulaceae ring_alpha 2 0.8389830508
+p__Euryarchaeota.c__Methanomicrobia.o__Methanosarcinales.f__Methanosaetaceae ring_alpha 2 0.7288135593
+p__Euryarchaeota.c__Methanomicrobia.o__Methanosarcinales.f__Methanosarcinaceae ring_alpha 2 0.9118644068
+p__Euryarchaeota.c__Methanomicrobia.o__Methanomicrobiales.f__Methanospirillaceae ring_alpha 2 0.86440678
+p__Euryarchaeota.c__Methanomicrobia.o__Methanomicrobia_noname.f__Methanomicrobia_noname ring_alpha 2 0.71186441
+p__Euryarchaeota.c__Methanopyri.o__Methanopyrales.f__Methanopyraceae ring_alpha 2 0.59322034
+p__Euryarchaeota.c__Thermococci.o__Thermococcales.f__Thermococcaceae ring_alpha 2 0.8493408663
+p__Euryarchaeota.c__Thermoplasmata.o__Thermoplasmatales.f__Picrophilaceae ring_alpha 2 0.74576271
+p__Euryarchaeota.c__Thermoplasmata.o__Thermoplasmatales.f__Thermoplasmataceae ring_alpha 2 0.77966102
+p__Euryarchaeota.c__Euryarchaeota_noname.o__Euryarchaeota_noname.f__Euryarchaeota_noname ring_alpha 2 0.7966101695
+p__Euryarchaeota.c__Halobacteria.o__Halobacteria_noname.f__Halobacteria_noname ring_alpha 2 0.6440677966
+p__Euryarchaeota.c__Halobacteria.o__Halobacteriales.f__Halobacteria_noname ring_alpha 2 0.7711864407
+p__Euryarchaeota.c__Euryarchaeota_noname.o__Euryarchaeota_noname.f__Halobacteria_noname ring_alpha 2 0.69491525
+p__Nanoarchaeota.c__Nanoarchaeota_noname.o__Nanoarchaeota_noname.f__Nanoarchaeota_noname ring_alpha 2 0.6694915254
+p__Korarchaeota.c__Korarchaeota_noname.o__Korarchaeota_noname.f__Korarchaeota_noname ring_alpha 2 0.77966102
+p__Thaumarchaeota.c__Thaumarchaeota_noname.o__Cenarchaeales.f__Cenarchaeaceae ring_alpha 2 0.76271186
+p__Thaumarchaeota.c__Thaumarchaeota_noname.o__Nitrosopumilales.f__Nitrosopumilaceae ring_alpha 2 0.6876513317
+p__Thaumarchaeota.c__Thaumarchaeota_noname.o__Nitrososphaerales.f__Nitrososphaeraceae ring_alpha 2 0.57627119
+p__Thaumarchaeota.c__Thaumarchaeota_noname.o__Thaumarchaeota_noname.f__Thaumarchaeota_noname ring_alpha 2 0.5028248588
+
+p__Crenarchaeota.c__Thermoprotei.o__Acidilobales.f__Acidilobaceae ring_alpha 3 0.57
+p__Crenarchaeota.c__Thermoprotei.o__Acidilobales.f__Caldisphaeraceae ring_alpha 3 0.3
+p__Crenarchaeota.c__Thermoprotei.o__Desulfurococcales.f__Desulfurococcaceae ring_alpha 3 0.4716666667
+p__Crenarchaeota.c__Thermoprotei.o__Desulfurococcales.f__Pyrodictiaceae ring_alpha 3 0.545
+p__Crenarchaeota.c__Thermoprotei.o__Fervidicoccales.f__Fervidicoccaceae ring_alpha 3 0.37
+p__Crenarchaeota.c__Thermoprotei.o__Sulfolobales.f__Sulfolobaceae ring_alpha 3 0.372
+p__Crenarchaeota.c__Thermoprotei.o__Sulfolobales.f__Sulfolobales_noname ring_alpha 3 0.52
+p__Crenarchaeota.c__Thermoprotei.o__Thermoproteales.f__Thermofilaceae ring_alpha 3 0.58
+p__Crenarchaeota.c__Thermoprotei.o__Thermoproteales.f__Thermoproteaceae ring_alpha 3 0.525
+p__Crenarchaeota.c__Crenarchaeota_noname.o__Crenarchaeota_noname.f__Crenarchaeota_noname ring_alpha 3 0.58
+p__Euryarchaeota.c__Archaeoglobi.o__Archaeoglobales.f__Archaeoglobaceae ring_alpha 3 0.46
+p__Euryarchaeota.c__Thermoplasmata.o__Thermoplasmatales.f__Ferroplasmaceae ring_alpha 3 0.37
+p__Euryarchaeota.c__Halobacteria.o__Halobacteriales.f__Halobacteriaceae ring_alpha 3 0.6163829787
+p__Euryarchaeota.c__Methanobacteria.o__Methanobacteriales.f__Methanobacteriaceae ring_alpha 3 0.3654545455
+p__Euryarchaeota.c__Methanobacteria.o__Methanobacteriales.f__Methanothermaceae ring_alpha 3 0.32
+p__Euryarchaeota.c__Methanococci.o__Methanococcales.f__Methanococcaceae ring_alpha 3 0.317
+p__Euryarchaeota.c__Methanococci.o__Methanococcales.f__Methanocaldococcaceae ring_alpha 3 0.3175
+p__Euryarchaeota.c__Methanomicrobia.o__Methanocellales.f__Methanocellaceae ring_alpha 3 0.5433333333
+p__Euryarchaeota.c__Methanomicrobia.o__Methanomicrobiales.f__Methanocorpusculaceae ring_alpha 3 0.505
+p__Euryarchaeota.c__Methanomicrobia.o__Methanomicrobiales.f__Methanomicrobiaceae ring_alpha 3 0.53
+p__Euryarchaeota.c__Methanomicrobia.o__Methanomicrobiales.f__Methanoregulaceae ring_alpha 3 0.555
+p__Euryarchaeota.c__Methanomicrobia.o__Methanosarcinales.f__Methanosaetaceae ring_alpha 3 0.5533333333
+p__Euryarchaeota.c__Methanomicrobia.o__Methanosarcinales.f__Methanosarcinaceae ring_alpha 3 0.4127272727
+p__Euryarchaeota.c__Methanomicrobia.o__Methanomicrobiales.f__Methanospirillaceae ring_alpha 3 0.45
+p__Euryarchaeota.c__Methanomicrobia.o__Methanomicrobia_noname.f__Methanomicrobia_noname ring_alpha 3 0.6
+p__Euryarchaeota.c__Methanopyri.o__Methanopyrales.f__Methanopyraceae ring_alpha 3 0.61
+p__Euryarchaeota.c__Thermococci.o__Thermococcales.f__Thermococcaceae ring_alpha 3 0.4738888889
+p__Euryarchaeota.c__Thermoplasmata.o__Thermoplasmatales.f__Picrophilaceae ring_alpha 3 0.36
+p__Euryarchaeota.c__Thermoplasmata.o__Thermoplasmatales.f__Thermoplasmataceae ring_alpha 3 0.4
+p__Euryarchaeota.c__Euryarchaeota_noname.o__Euryarchaeota_noname.f__Euryarchaeota_noname ring_alpha 3 0.415
+p__Euryarchaeota.c__Halobacteria.o__Halobacteria_noname.f__Halobacteria_noname ring_alpha 3 0.56
+p__Euryarchaeota.c__Halobacteria.o__Halobacteriales.f__Halobacteria_noname ring_alpha 3 0.615
+p__Euryarchaeota.c__Euryarchaeota_noname.o__Euryarchaeota_noname.f__Halobacteria_noname ring_alpha 3 0.52
+p__Nanoarchaeota.c__Nanoarchaeota_noname.o__Nanoarchaeota_noname.f__Nanoarchaeota_noname ring_alpha 3 0.28
+p__Korarchaeota.c__Korarchaeota_noname.o__Korarchaeota_noname.f__Korarchaeota_noname ring_alpha 3 0.49
+p__Thaumarchaeota.c__Thaumarchaeota_noname.o__Cenarchaeales.f__Cenarchaeaceae ring_alpha 3 0.57
+p__Thaumarchaeota.c__Thaumarchaeota_noname.o__Nitrosopumilales.f__Nitrosopumilaceae ring_alpha 3 0.3328571429
+p__Thaumarchaeota.c__Thaumarchaeota_noname.o__Nitrososphaerales.f__Nitrososphaeraceae ring_alpha 3 0.48
+p__Thaumarchaeota.c__Thaumarchaeota_noname.o__Thaumarchaeota_noname.f__Thaumarchaeota_noname ring_alpha 3 0.4466666667
+
+p__Crenarchaeota.c__Thermoprotei.o__Acidilobales.f__Acidilobaceae ring_alpha 4 0.40557359
+p__Crenarchaeota.c__Thermoprotei.o__Acidilobales.f__Caldisphaeraceae ring_alpha 4 0.41341991
+p__Crenarchaeota.c__Thermoprotei.o__Desulfurococcales.f__Desulfurococcaceae ring_alpha 4 0.73333333333
+p__Crenarchaeota.c__Thermoprotei.o__Desulfurococcales.f__Pyrodictiaceae ring_alpha 4 0.43722944
+p__Crenarchaeota.c__Thermoprotei.o__Fervidicoccales.f__Fervidicoccaceae ring_alpha 4 0.3771645
+p__Crenarchaeota.c__Thermoprotei.o__Sulfolobales.f__Sulfolobaceae ring_alpha 4 0.7450054692
+p__Crenarchaeota.c__Thermoprotei.o__Sulfolobales.f__Sulfolobales_noname ring_alpha 4 0.45779221
+p__Crenarchaeota.c__Thermoprotei.o__Thermoproteales.f__Thermofilaceae ring_alpha 4 0.50892857
+p__Crenarchaeota.c__Thermoprotei.o__Thermoproteales.f__Thermoproteaceae ring_alpha 4 0.6297332566
+p__Crenarchaeota.c__Crenarchaeota_noname.o__Crenarchaeota_noname.f__Crenarchaeota_noname ring_alpha 4 0.1461139896
+p__Euryarchaeota.c__Archaeoglobi.o__Archaeoglobales.f__Archaeoglobaceae ring_alpha 4 0.6275866436
+p__Euryarchaeota.c__Thermoplasmata.o__Thermoplasmatales.f__Ferroplasmaceae ring_alpha 4 0.4586039
+p__Euryarchaeota.c__Halobacteria.o__Halobacteriales.f__Halobacteriaceae ring_alpha 4 1
+p__Euryarchaeota.c__Methanobacteria.o__Methanobacteriales.f__Methanobacteriaceae ring_alpha 4 0.5528471241
+p__Euryarchaeota.c__Methanobacteria.o__Methanobacteriales.f__Methanothermaceae ring_alpha 4 0.35254329
+p__Euryarchaeota.c__Methanococci.o__Methanococcales.f__Methanococcaceae ring_alpha 4 0.4683765112
+p__Euryarchaeota.c__Methanococci.o__Methanococcales.f__Methanocaldococcaceae ring_alpha 4 0.46445308
+p__Euryarchaeota.c__Methanomicrobia.o__Methanocellales.f__Methanocellaceae ring_alpha 4 0.7788236423
+p__Euryarchaeota.c__Methanomicrobia.o__Methanomicrobiales.f__Methanocorpusculaceae ring_alpha 4 0.4747351756
+p__Euryarchaeota.c__Methanomicrobia.o__Methanomicrobiales.f__Methanomicrobiaceae ring_alpha 4 0.7345610248
+p__Euryarchaeota.c__Methanomicrobia.o__Methanomicrobiales.f__Methanoregulaceae ring_alpha 4 0.6888327576
+p__Euryarchaeota.c__Methanomicrobia.o__Methanosarcinales.f__Methanosaetaceae ring_alpha 4 0.6269372481
+p__Euryarchaeota.c__Methanomicrobia.o__Methanosarcinales.f__Methanosarcinaceae ring_alpha 4 0.7991082326
+p__Euryarchaeota.c__Methanomicrobia.o__Methanomicrobiales.f__Methanospirillaceae ring_alpha 4 0.87635281
+p__Euryarchaeota.c__Methanomicrobia.o__Methanomicrobia_noname.f__Methanomicrobia_noname ring_alpha 4 0.71022727
+p__Euryarchaeota.c__Methanopyri.o__Methanopyrales.f__Methanopyraceae ring_alpha 4 0.4672619
+p__Euryarchaeota.c__Thermococci.o__Thermococcales.f__Thermococcaceae ring_alpha 4 0.5769398068
+p__Euryarchaeota.c__Thermoplasmata.o__Thermoplasmatales.f__Picrophilaceae ring_alpha 4 0.419671848
+p__Euryarchaeota.c__Thermoplasmata.o__Thermoplasmatales.f__Thermoplasmataceae ring_alpha 4 0.4223776626
+p__Euryarchaeota.c__Euryarchaeota_noname.o__Euryarchaeota_noname.f__Euryarchaeota_noname ring_alpha 4 0.4168307427
+p__Euryarchaeota.c__Halobacteria.o__Halobacteria_noname.f__Halobacteria_noname ring_alpha 4 0.4179130685
+p__Euryarchaeota.c__Halobacteria.o__Halobacteriales.f__Halobacteria_noname ring_alpha 4 0.8812838227
+p__Euryarchaeota.c__Euryarchaeota_noname.o__Euryarchaeota_noname.f__Halobacteria_noname ring_alpha 4 0.4819055843
+p__Nanoarchaeota.c__Nanoarchaeota_noname.o__Nanoarchaeota_noname.f__Nanoarchaeota_noname ring_alpha 4 0.65
+p__Korarchaeota.c__Korarchaeota_noname.o__Korarchaeota_noname.f__Korarchaeota_noname ring_alpha 4 0.4361773172
+p__Thaumarchaeota.c__Thaumarchaeota_noname.o__Cenarchaeales.f__Cenarchaeaceae ring_alpha 4 0.5457628094
+p__Thaumarchaeota.c__Thaumarchaeota_noname.o__Nitrosopumilales.f__Nitrosopumilaceae ring_alpha 4 0.5534937084
+p__Thaumarchaeota.c__Thaumarchaeota_noname.o__Nitrososphaerales.f__Nitrososphaeraceae ring_alpha 4 0.9638111687
+p__Thaumarchaeota.c__Thaumarchaeota_noname.o__Thaumarchaeota_noname.f__Thaumarchaeota_noname ring_alpha 4 0.3087334485
+
+#to change the height of the circular segment. (Instead of using ring_alhpa we could use ring_height)
+p__Crenarchaeota.c__Thermoprotei.o__Acidilobales.f__Acidilobaceae ring_height 5 1.2306582645
+p__Crenarchaeota.c__Thermoprotei.o__Acidilobales.f__Caldisphaeraceae ring_height 5 1.2721006365
+p__Crenarchaeota.c__Thermoprotei.o__Desulfurococcales.f__Desulfurococcaceae ring_height 5 1.1812271223
+p__Crenarchaeota.c__Thermoprotei.o__Desulfurococcales.f__Pyrodictiaceae ring_height 5 1.4434598655
+p__Crenarchaeota.c__Thermoprotei.o__Fervidicoccales.f__Fervidicoccaceae ring_height 5 1.0848932553
+p__Crenarchaeota.c__Thermoprotei.o__Sulfolobales.f__Sulfolobaceae ring_height 5 2.0933181261
+p__Crenarchaeota.c__Thermoprotei.o__Sulfolobales.f__Sulfolobales_noname ring_height 5 1.238889501
+p__Crenarchaeota.c__Thermoprotei.o__Thermoproteales.f__Thermofilaceae ring_height 5 1.4913044931
+p__Crenarchaeota.c__Thermoprotei.o__Thermoproteales.f__Thermoproteaceae ring_height 5 1.7405903157
+p__Crenarchaeota.c__Crenarchaeota_noname.o__Crenarchaeota_noname.f__Crenarchaeota_noname ring_height 5 0.3971727459
+p__Euryarchaeota.c__Archaeoglobi.o__Archaeoglobales.f__Archaeoglobaceae ring_height 5 1.6704778455
+p__Euryarchaeota.c__Thermoplasmata.o__Thermoplasmatales.f__Ferroplasmaceae ring_height 5 1.5341054427
+p__Euryarchaeota.c__Halobacteria.o__Halobacteriales.f__Halobacteriaceae ring_height 5 3
+p__Euryarchaeota.c__Methanobacteria.o__Methanobacteriales.f__Methanobacteriaceae ring_height 5 1.7640486555
+p__Euryarchaeota.c__Methanobacteria.o__Methanobacteriales.f__Methanothermaceae ring_height 5 1.022503953
+p__Euryarchaeota.c__Methanococci.o__Methanococcales.f__Methanococcaceae ring_height 5 1.4230595733
+p__Euryarchaeota.c__Methanococci.o__Methanococcales.f__Methanocaldococcaceae ring_height 5 1.3527083034
+p__Euryarchaeota.c__Methanomicrobia.o__Methanocellales.f__Methanocellaceae ring_height 5 2.3344696302
+p__Euryarchaeota.c__Methanomicrobia.o__Methanomicrobiales.f__Methanocorpusculaceae ring_height 5 1.4440001715
+p__Euryarchaeota.c__Methanomicrobia.o__Methanomicrobiales.f__Methanomicrobiaceae ring_height 5 2.2610276991
+p__Euryarchaeota.c__Methanomicrobia.o__Methanomicrobiales.f__Methanoregulaceae ring_height 5 2.1257737791
+p__Euryarchaeota.c__Methanomicrobia.o__Methanosarcinales.f__Methanosaetaceae ring_height 5 2.0496949437
+p__Euryarchaeota.c__Methanomicrobia.o__Methanosarcinales.f__Methanosarcinaceae ring_height 5 2.6967928881
+p__Euryarchaeota.c__Methanomicrobia.o__Methanomicrobiales.f__Methanospirillaceae ring_height 5 2.9151340641
+p__Euryarchaeota.c__Methanomicrobia.o__Methanomicrobia_noname.f__Methanomicrobia_noname ring_height 5 2.1548364009
+p__Euryarchaeota.c__Methanopyri.o__Methanopyrales.f__Methanopyraceae ring_height 5 1.3939145487
+p__Euryarchaeota.c__Thermococci.o__Thermococcales.f__Thermococcaceae ring_height 5 1.6115280981
+p__Euryarchaeota.c__Thermoplasmata.o__Thermoplasmatales.f__Picrophilaceae ring_height 5 1.27131855
+p__Euryarchaeota.c__Thermoplasmata.o__Thermoplasmatales.f__Thermoplasmataceae ring_height 5 1.3033166697
+p__Euryarchaeota.c__Euryarchaeota_noname.o__Euryarchaeota_noname.f__Euryarchaeota_noname ring_height 5 1.2022704084
+p__Euryarchaeota.c__Halobacteria.o__Halobacteria_noname.f__Halobacteria_noname ring_height 5 1.0045245936
+p__Euryarchaeota.c__Halobacteria.o__Halobacteriales.f__Halobacteria_noname ring_height 5 2.5966594725
+p__Euryarchaeota.c__Euryarchaeota_noname.o__Euryarchaeota_noname.f__Halobacteria_noname ring_height 5 1.6975114005
+p__Nanoarchaeota.c__Nanoarchaeota_noname.o__Nanoarchaeota_noname.f__Nanoarchaeota_noname ring_height 5 0.4460094147
+p__Korarchaeota.c__Korarchaeota_noname.o__Korarchaeota_noname.f__Korarchaeota_noname ring_height 5 1.3082123187
+p__Thaumarchaeota.c__Thaumarchaeota_noname.o__Cenarchaeales.f__Cenarchaeaceae ring_height 5 1.6818449946
+p__Thaumarchaeota.c__Thaumarchaeota_noname.o__Nitrosopumilales.f__Nitrosopumilaceae ring_height 5 1.3810843086
+p__Thaumarchaeota.c__Thaumarchaeota_noname.o__Nitrososphaerales.f__Nitrososphaeraceae ring_height 5 2.3304177465
+p__Thaumarchaeota.c__Thaumarchaeota_noname.o__Thaumarchaeota_noname.f__Thaumarchaeota_noname ring_height 5 0.8434721604
+
diff --git a/examples/internal_labels/archaea.txt b/examples/internal_labels/archaea.txt
new file mode 100644
index 0000000..2072a52
--- /dev/null
+++ b/examples/internal_labels/archaea.txt
@@ -0,0 +1,86 @@
+p__Archaea_noname
+p__Crenarchaeota
+p__Euryarchaeota
+p__Korarchaeota
+p__Nanoarchaeota
+p__Thaumarchaeota
+p__Archaea_noname.c__Archaea_noname
+p__Crenarchaeota.c__Crenarchaeota_noname
+p__Crenarchaeota.c__Thermoprotei
+p__Euryarchaeota.c__Archaeoglobi
+p__Euryarchaeota.c__Euryarchaeota_noname
+p__Euryarchaeota.c__Halobacteria
+p__Euryarchaeota.c__Methanobacteria
+p__Euryarchaeota.c__Methanococci
+p__Euryarchaeota.c__Methanomicrobia
+p__Euryarchaeota.c__Methanopyri
+p__Euryarchaeota.c__Nanohaloarchaea
+p__Euryarchaeota.c__Thermococci
+p__Euryarchaeota.c__Thermoplasmata
+p__Korarchaeota.c__Korarchaeota_noname
+p__Nanoarchaeota.c__Nanoarchaeota_noname
+p__Thaumarchaeota.c__Thaumarchaeota_noname
+p__Archaea_noname.c__Archaea_noname.o__Archaea_noname
+p__Crenarchaeota.c__Crenarchaeota_noname.o__Crenarchaeota_noname
+p__Crenarchaeota.c__Thermoprotei.o__Acidilobales
+p__Crenarchaeota.c__Thermoprotei.o__Desulfurococcales
+p__Crenarchaeota.c__Thermoprotei.o__Fervidicoccales
+p__Crenarchaeota.c__Thermoprotei.o__Sulfolobales
+p__Crenarchaeota.c__Thermoprotei.o__Thermoproteales
+p__Euryarchaeota.c__Archaeoglobi.o__Archaeoglobales
+p__Euryarchaeota.c__Euryarchaeota_noname.o__Euryarchaeota_noname
+p__Euryarchaeota.c__Halobacteria.o__Halobacteriales
+p__Euryarchaeota.c__Methanobacteria.o__Methanobacteriales
+p__Euryarchaeota.c__Methanococci.o__Methanococcales
+p__Euryarchaeota.c__Methanomicrobia.o__Methanocellales
+p__Euryarchaeota.c__Methanomicrobia.o__Methanomicrobiales
+p__Euryarchaeota.c__Methanomicrobia.o__Methanomicrobia_noname
+p__Euryarchaeota.c__Methanomicrobia.o__Methanosarcinales
+p__Euryarchaeota.c__Methanopyri.o__Methanopyrales
+p__Euryarchaeota.c__Nanohaloarchaea.o__Nanohaloarchaea_noname
+p__Euryarchaeota.c__Thermococci.o__Thermococcales
+p__Euryarchaeota.c__Thermoplasmata.o__Thermoplasmatales
+p__Korarchaeota.c__Korarchaeota_noname.o__Korarchaeota_noname
+p__Nanoarchaeota.c__Nanoarchaeota_noname.o__Nanoarchaeota_noname
+p__Thaumarchaeota.c__Thaumarchaeota_noname.o__Cenarchaeales
+p__Thaumarchaeota.c__Thaumarchaeota_noname.o__Nitrosopumilales
+p__Thaumarchaeota.c__Thaumarchaeota_noname.o__Nitrososphaerales
+p__Archaea_noname.c__Archaea_noname.o__Archaea_noname.f__Archaea_noname
+p__Crenarchaeota.c__Crenarchaeota_noname.o__Crenarchaeota_noname.f__Crenarchaeota_noname
+p__Crenarchaeota.c__Thermoprotei.o__Acidilobales.f__Acidilobaceae
+p__Crenarchaeota.c__Thermoprotei.o__Acidilobales.f__Caldisphaeraceae
+p__Crenarchaeota.c__Thermoprotei.o__Desulfurococcales.f__Desulfurococcaceae
+p__Crenarchaeota.c__Thermoprotei.o__Desulfurococcales.f__Pyrodictiaceae
+p__Crenarchaeota.c__Thermoprotei.o__Fervidicoccales.f__Fervidicoccaceae
+p__Crenarchaeota.c__Thermoprotei.o__Sulfolobales.f__Sulfolobaceae
+p__Crenarchaeota.c__Thermoprotei.o__Sulfolobales.f__Sulfolobales_noname
+p__Crenarchaeota.c__Thermoprotei.o__Thermoproteales.f__Thermofilaceae
+p__Crenarchaeota.c__Thermoprotei.o__Thermoproteales.f__Thermoproteaceae
+p__Euryarchaeota.c__Archaeoglobi.o__Archaeoglobales.f__Archaeoglobaceae
+p__Euryarchaeota.c__Euryarchaeota_noname.o__Euryarchaeota_noname.f__Euryarchaeota_noname
+p__Euryarchaeota.c__Halobacteria.o__Halobacteriales.f__Halobacteriaceae
+p__Euryarchaeota.c__Halobacteria.o__Halobacteria_noname.f__Halobacteria_noname
+p__Euryarchaeota.c__Methanobacteria.o__Methanobacteriales.f__Methanobacteriaceae
+p__Euryarchaeota.c__Methanobacteria.o__Methanobacteriales.f__Methanothermaceae
+p__Euryarchaeota.c__Methanococci.o__Methanococcales.f__Methanocaldococcaceae
+p__Euryarchaeota.c__Methanococci.o__Methanococcales.f__Methanococcaceae
+p__Euryarchaeota.c__Methanomicrobia.o__Methanocellales.f__Methanocellaceae
+p__Euryarchaeota.c__Methanomicrobia.o__Methanomicrobiales.f__Methanocorpusculaceae
+p__Euryarchaeota.c__Methanomicrobia.o__Methanomicrobiales.f__Methanomicrobiaceae
+p__Euryarchaeota.c__Methanomicrobia.o__Methanomicrobiales.f__Methanoregulaceae
+p__Euryarchaeota.c__Methanomicrobia.o__Methanomicrobiales.f__Methanospirillaceae
+p__Euryarchaeota.c__Methanomicrobia.o__Methanomicrobia_noname.f__Methanomicrobia_noname
+p__Euryarchaeota.c__Methanomicrobia.o__Methanosarcinales.f__Methanosaetaceae
+p__Euryarchaeota.c__Methanomicrobia.o__Methanosarcinales.f__Methanosarcinaceae
+p__Euryarchaeota.c__Methanopyri.o__Methanopyrales.f__Methanopyraceae
+p__Euryarchaeota.c__Nanohaloarchaea.o__Nanohaloarchaea_noname.f__Nanohaloarchaea_noname
+p__Euryarchaeota.c__Thermococci.o__Thermococcales.f__Thermococcaceae
+p__Euryarchaeota.c__Thermoplasmata.o__Thermoplasmatales.f__Ferroplasmaceae
+p__Euryarchaeota.c__Thermoplasmata.o__Thermoplasmatales.f__Picrophilaceae
+p__Euryarchaeota.c__Thermoplasmata.o__Thermoplasmatales.f__Thermoplasmataceae
+p__Korarchaeota.c__Korarchaeota_noname.o__Korarchaeota_noname.f__Korarchaeota_noname
+p__Nanoarchaeota.c__Nanoarchaeota_noname.o__Nanoarchaeota_noname.f__Nanoarchaeota_noname
+p__Thaumarchaeota.c__Thaumarchaeota_noname.o__Cenarchaeales.f__Cenarchaeaceae
+p__Thaumarchaeota.c__Thaumarchaeota_noname.o__Nitrosopumilales.f__Nitrosopumilaceae
+p__Thaumarchaeota.c__Thaumarchaeota_noname.o__Nitrososphaerales.f__Nitrososphaeraceae
+p__Thaumarchaeota.c__Thaumarchaeota_noname.o__Thaumarchaeota_noname.f__Thaumarchaeota_noname
diff --git a/examples/internal_labels/readme.txt b/examples/internal_labels/readme.txt
new file mode 100644
index 0000000..a7cf6db
--- /dev/null
+++ b/examples/internal_labels/readme.txt
@@ -0,0 +1,27 @@
+This is a quick guide that helps you to use graphlan and it is referred only to the folder "newops".
+If you need more hepl, you can open each file .txt or .sh. You can find a comment for each step line (#comment) that specifies what you are going to do with the option written below.
+
+GraPhlAn is a software tool for producing high-quality circular representations of taxonomic and phylogenetic trees.
+If want to understand how to use this sofware you should open the files in this order:
+ archaea.txt
+ step0.sh
+ annot_0.txt
+ step1.sh
+ annot_1.txt
+ step2.sh
+ annot_2.txt
+ step3.sh
+ annot_3.txt
+ step4.sh
+
+The two main script are:
+ 1- graphlan.py
+ 2- graphlan_annotate.py
+The first one is used to generate the output image in two different formats (png/svg). The second one is used to tie the annotation file to the input tree. This two options are contained in the "script#.sh".
+
+"annot_#.txt" is an annotation file in which you can set the options you want to give your tree.
+"step#.sh" is a sript that ties an annotation file to the input tree to create an output image.
+
+
+
+
diff --git a/examples/internal_labels/step0.sh b/examples/internal_labels/step0.sh
new file mode 100755
index 0000000..74080e0
--- /dev/null
+++ b/examples/internal_labels/step0.sh
@@ -0,0 +1,3 @@
+#"graphlan.py is a script used to execute the plot of the tree and create the images. We can change dpi(resolution) and the size
+graphlan.py archaea.txt step_0.png --dpi 200 --size 10.5
+graphlan.py archaea.txt step_0.svg --dpi 200 --size 10.5
diff --git a/examples/internal_labels/step1.sh b/examples/internal_labels/step1.sh
new file mode 100755
index 0000000..a59b256
--- /dev/null
+++ b/examples/internal_labels/step1.sh
@@ -0,0 +1,4 @@
+# graphlan_annotate.py put the annotation file (annot_0.txt) and the plot of the tree (archaea.txt) together, to create "guide.xml". This new file contains both .txt files. Than we launch the images (look at step0.sh).
+graphlan_annotate.py --annot annot_0.txt archaea.txt guide_1.xml
+graphlan.py guide_1.xml step1.png --dpi 300 --size 10.5
+graphlan.py guide_1.xml step1.svg --dpi 300 --size 10.5
diff --git a/examples/internal_labels/step2.sh b/examples/internal_labels/step2.sh
new file mode 100755
index 0000000..fb0cc10
--- /dev/null
+++ b/examples/internal_labels/step2.sh
@@ -0,0 +1,4 @@
+#look at step1.sh
+graphlan_annotate.py --annot annot_1.txt guide_1.xml guide_2.xml
+graphlan.py guide_2.xml step2.png --dpi 400 --size 11.0
+graphlan.py guide_2.xml step2.svg --dpi 400 --size 11.0
diff --git a/examples/internal_labels/step3.sh b/examples/internal_labels/step3.sh
new file mode 100755
index 0000000..bf013c9
--- /dev/null
+++ b/examples/internal_labels/step3.sh
@@ -0,0 +1,4 @@
+#look at step1.sh
+graphlan_annotate.py --annot annot_2.txt guide_2.xml guide_3.xml
+graphlan.py guide_3.xml step3.png --dpi 300 --size 10.5
+graphlan.py guide_3.xml step3.svg --dpi 300 --size 10.5
diff --git a/examples/internal_labels/step4.sh b/examples/internal_labels/step4.sh
new file mode 100755
index 0000000..196a6e0
--- /dev/null
+++ b/examples/internal_labels/step4.sh
@@ -0,0 +1,4 @@
+#look at step1.sh
+graphlan_annotate.py --annot annot_3.txt guide_3.xml guide_4.xml
+graphlan.py guide_4.xml step4.png --dpi 200 --size 10.5
+graphlan.py guide_4.xml step4.svg --dpi 200 --size 10.5
diff --git a/examples/kegg/annot.txt b/examples/kegg/annot.txt
new file mode 100644
index 0000000..cbe453c
--- /dev/null
+++ b/examples/kegg/annot.txt
@@ -0,0 +1,20167 @@
+total_plotted_degrees 350
+start_rotation 91
+branch_bracket_depth 0.0
+branch_bracket_width 0.0
+clade_marker_size .6
+annotation_background_separation -.075
+annotation_background_offset -0.03
+branch_thickness 0.65
+clade_marker_edge_width 0.35
+annotation_font_size 8
+annotation_background_width 0.04
+annotation_legend_font_size 9
+class_legend_font_size 9
+title_font_size 12
+Spirochaetes annotation Spirochaetes
+Spirochaetes clade_marker_color #B0171F
+Spirochaetes clade_marker_size 45
+Cyanobacteria annotation Cyanobacteria
+Cyanobacteria clade_marker_color #006400
+Cyanobacteria clade_marker_size 45
+Chlamydiae annotation Chlamydiae
+Chlamydiae clade_marker_color #FEC80A
+Chlamydiae clade_marker_size 45
+Aquificae annotation Aquificae
+Aquificae clade_marker_color #EE6A50
+Aquificae clade_marker_size 45
+Thermi annotation Thermi
+Thermi clade_marker_color #7B68EE
+Thermi clade_marker_size 45
+Bacteroidetes annotation Bacteroidetes
+Bacteroidetes clade_marker_color #87CEFA
+Bacteroidetes clade_marker_size 45
+Chloroflexi annotation Chloroflexi
+Chloroflexi clade_marker_color #8DEEEE
+Chloroflexi clade_marker_size 45
+Actinobacteria annotation Actinobacteria
+Actinobacteria clade_marker_color #9ACD32
+Actinobacteria clade_marker_size 45
+Chlorobi annotation Chlorobi
+Chlorobi clade_marker_color #D15FEE
+Chlorobi clade_marker_size 45
+Thermotogae annotation Thermotogae
+Thermotogae clade_marker_color #00CD00
+Thermotogae clade_marker_size 45
+Firmicutes annotation Firmicutes
+Firmicutes clade_marker_color #808080
+Firmicutes clade_marker_size 45
+Proteobacteria annotation Proteobacteria
+Proteobacteria clade_marker_color #B0171F
+Proteobacteria clade_marker_size 45
+Tenericutes annotation Tenericutes
+Tenericutes clade_marker_color #191970
+Tenericutes clade_marker_size 45
+Euryarchaeota annotation Euryarchaeota
+Euryarchaeota clade_marker_color #800080
+Euryarchaeota clade_marker_size 45
+Crenarchaeota annotation Crenarchaeota
+Crenarchaeota clade_marker_color #800000
+Crenarchaeota clade_marker_size 45
+pto clade_marker_size 10
+pto clade_marker_color #800080
+sco clade_marker_size 10
+sco clade_marker_color #9ACD32
+req clade_marker_size 10
+req clade_marker_color #9ACD32
+bvu clade_marker_size 10
+bvu clade_marker_color #87CEFA
+pth clade_marker_size 10
+pth clade_marker_color #808080
+osp clade_marker_size 10
+osp clade_marker_color #87CEFA
+lmf clade_marker_size 10
+lmf clade_marker_color #808080
+sca clade_marker_size 10
+sca clade_marker_color #808080
+scb clade_marker_size 10
+scb clade_marker_color #9ACD32
+bva clade_marker_size 10
+bva clade_marker_color #B0171F
+llo clade_marker_size 10
+llo clade_marker_color #B0171F
+nwa clade_marker_size 10
+nwa clade_marker_color #B0171F
+rop clade_marker_size 10
+rop clade_marker_color #9ACD32
+vco clade_marker_size 10
+vco clade_marker_color #B0171F
+ngk clade_marker_size 10
+ngk clade_marker_color #B0171F
+blm clade_marker_size 10
+blm clade_marker_color #9ACD32
+ots clade_marker_size 10
+ots clade_marker_color #B0171F
+zmn clade_marker_size 10
+zmn clade_marker_color #B0171F
+zmo clade_marker_size 10
+zmo clade_marker_color #B0171F
+lki clade_marker_size 10
+lki clade_marker_color #808080
+nse clade_marker_size 10
+nse clade_marker_color #B0171F
+vex clade_marker_size 10
+vex clade_marker_color #B0171F
+bqu clade_marker_size 10
+bqu clade_marker_color #B0171F
+nwi clade_marker_size 10
+nwi clade_marker_color #B0171F
+tai clade_marker_size 10
+tai clade_marker_color k
+mpe clade_marker_size 10
+mpe clade_marker_color #191970
+lre clade_marker_size 10
+lre clade_marker_color #808080
+lrf clade_marker_size 10
+lrf clade_marker_color #808080
+mpn clade_marker_size 10
+mpn clade_marker_color #191970
+mpo clade_marker_size 10
+mpo clade_marker_color #B0171F
+ftf clade_marker_size 10
+ftf clade_marker_color #B0171F
+mpu clade_marker_size 10
+mpu clade_marker_color #191970
+tpa clade_marker_size 10
+tpa clade_marker_color #B0171F
+fal clade_marker_size 10
+fal clade_marker_color #9ACD32
+fth clade_marker_size 10
+fth clade_marker_color #B0171F
+sme clade_marker_size 10
+sme clade_marker_color #B0171F
+hya clade_marker_size 10
+hya clade_marker_color #EE6A50
+din clade_marker_size 10
+din clade_marker_color k
+hci clade_marker_size 10
+hci clade_marker_color #B0171F
+cmi clade_marker_size 10
+cmi clade_marker_color #9ACD32
+tra clade_marker_size 10
+tra clade_marker_color #7B68EE
+smc clade_marker_size 10
+smc clade_marker_color #808080
+dia clade_marker_size 10
+dia clade_marker_color #B0171F
+gur clade_marker_size 10
+gur clade_marker_color #B0171F
+wsu clade_marker_size 10
+wsu clade_marker_color #B0171F
+min clade_marker_size 10
+min clade_marker_color k
+trq clade_marker_size 10
+trq clade_marker_color #00CD00
+cmu clade_marker_size 10
+cmu clade_marker_color #FFC125
+bxe clade_marker_size 10
+bxe clade_marker_color #B0171F
+pmt clade_marker_size 10
+pmt clade_marker_color #006400
+pmu clade_marker_size 10
+pmu clade_marker_color #B0171F
+cfl clade_marker_size 10
+cfl clade_marker_color #9ACD32
+tel clade_marker_size 10
+tel clade_marker_color #006400
+pmr clade_marker_size 10
+pmr clade_marker_color #B0171F
+rec clade_marker_size 10
+rec clade_marker_color #B0171F
+cfe clade_marker_size 10
+cfe clade_marker_color #FFC125
+pmx clade_marker_size 10
+pmx clade_marker_color #EE6A50
+pmy clade_marker_size 10
+pmy clade_marker_color #B0171F
+pmz clade_marker_size 10
+pmz clade_marker_color #87CEFA
+plt clade_marker_size 10
+plt clade_marker_color #D15FEE
+pma clade_marker_size 10
+pma clade_marker_color #006400
+pml clade_marker_size 10
+pml clade_marker_color #191970
+mmy clade_marker_size 10
+mmy clade_marker_color #191970
+pmn clade_marker_size 10
+pmn clade_marker_color #006400
+pmh clade_marker_size 10
+pmh clade_marker_color #006400
+lla clade_marker_size 10
+lla clade_marker_color #808080
+tdn clade_marker_size 10
+tdn clade_marker_color #B0171F
+mmc clade_marker_size 10
+mmc clade_marker_color #9ACD32
+aba clade_marker_size 10
+aba clade_marker_color k
+abc clade_marker_size 10
+abc clade_marker_color #B0171F
+asu clade_marker_size 10
+asu clade_marker_color #B0171F
+xop clade_marker_size 10
+xop clade_marker_color #B0171F
+abi clade_marker_size 10
+abi clade_marker_color #800080
+tcx clade_marker_size 10
+tcx clade_marker_color #B0171F
+sbu clade_marker_size 10
+sbu clade_marker_color #B0171F
+hde clade_marker_size 10
+hde clade_marker_color #B0171F
+abn clade_marker_size 10
+abn clade_marker_color #B0171F
+abo clade_marker_size 10
+abo clade_marker_color #B0171F
+bdu clade_marker_size 10
+bdu clade_marker_color #B0171F
+rle clade_marker_size 10
+rle clade_marker_color #B0171F
+ran clade_marker_size 10
+ran clade_marker_color #87CEFA
+abu clade_marker_size 10
+abu clade_marker_color #B0171F
+cao clade_marker_size 10
+cao clade_marker_color #87CEFA
+net clade_marker_size 10
+net clade_marker_color #B0171F
+neu clade_marker_size 10
+neu clade_marker_color #B0171F
+rlg clade_marker_size 10
+rlg clade_marker_color #B0171F
+sbm clade_marker_size 10
+sbm clade_marker_color #B0171F
+neq clade_marker_size 10
+neq clade_marker_color k
+mea clade_marker_size 10
+mea clade_marker_color #B0171F
+xfn clade_marker_size 10
+xfn clade_marker_color #B0171F
+sav clade_marker_size 10
+sav clade_marker_color #808080
+mel clade_marker_size 10
+mel clade_marker_color #800080
+mlu clade_marker_size 10
+mlu clade_marker_color #9ACD32
+mei clade_marker_size 10
+mei clade_marker_color #B0171F
+meh clade_marker_size 10
+meh clade_marker_color #B0171F
+mmp clade_marker_size 10
+mmp clade_marker_color #800080
+mev clade_marker_size 10
+mev clade_marker_color #800080
+mep clade_marker_size 10
+mep clade_marker_color #B0171F
+mes clade_marker_size 10
+mes clade_marker_color #B0171F
+mmr clade_marker_size 10
+mmr clade_marker_color #B0171F
+caa clade_marker_size 10
+caa clade_marker_color k
+ctt clade_marker_size 10
+ctt clade_marker_color #B0171F
+asc clade_marker_size 10
+asc clade_marker_color #800000
+hbo clade_marker_size 10
+hbo clade_marker_color #800080
+ctr clade_marker_size 10
+ctr clade_marker_color #FFC125
+cts clade_marker_size 10
+cts clade_marker_color #D15FEE
+sjp clade_marker_size 10
+sjp clade_marker_color #B0171F
+mmo clade_marker_size 10
+mmo clade_marker_color #191970
+bov clade_marker_size 10
+bov clade_marker_color #B0171F
+rde clade_marker_size 10
+rde clade_marker_color #B0171F
+cte clade_marker_size 10
+cte clade_marker_color #D15FEE
+vmo clade_marker_size 10
+vmo clade_marker_color #800000
+cta clade_marker_size 10
+cta clade_marker_color #FFC125
+ctc clade_marker_size 10
+ctc clade_marker_color #808080
+dra clade_marker_size 10
+dra clade_marker_color #7B68EE
+mmi clade_marker_size 10
+mmi clade_marker_color #9ACD32
+sew clade_marker_size 10
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+rdn clade_marker_size 10
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+cti clade_marker_size 10
+cti clade_marker_color #B0171F
+ctj clade_marker_size 10
+ctj clade_marker_color #FFC125
+sgy clade_marker_size 10
+sgy clade_marker_color #808080
+xcb clade_marker_size 10
+xcb clade_marker_color #B0171F
+ipa clade_marker_size 10
+ipa clade_marker_color k
+tau clade_marker_size 10
+tau clade_marker_color #B0171F
+apr clade_marker_size 10
+apr clade_marker_color #808080
+aps clade_marker_size 10
+aps clade_marker_color #87CEFA
+ecp clade_marker_size 10
+ecp clade_marker_color #B0171F
+ipo clade_marker_size 10
+ipo clade_marker_color k
+shc clade_marker_size 10
+shc clade_marker_color #800000
+brm clade_marker_size 10
+brm clade_marker_color #B0171F
+apn clade_marker_size 10
+apn clade_marker_color #9ACD32
+sgl clade_marker_size 10
+sgl clade_marker_color #B0171F
+sgo clade_marker_size 10
+sgo clade_marker_color #808080
+brh clade_marker_size 10
+brh clade_marker_color #B0171F
+apb clade_marker_size 10
+apb clade_marker_color #B0171F
+nde clade_marker_size 10
+nde clade_marker_color k
+bre clade_marker_size 10
+bre clade_marker_color #B0171F
+apa clade_marker_size 10
+apa clade_marker_color #B0171F
+bra clade_marker_size 10
+bra clade_marker_color #B0171F
+ape clade_marker_size 10
+ape clade_marker_color #800000
+cha clade_marker_size 10
+cha clade_marker_color #B0171F
+chd clade_marker_size 10
+chd clade_marker_color #808080
+msy clade_marker_size 10
+msy clade_marker_color #191970
+mrb clade_marker_size 10
+mrb clade_marker_color #7B68EE
+dno clade_marker_size 10
+dno clade_marker_color #B0171F
+mst clade_marker_size 10
+mst clade_marker_color #800080
+chl clade_marker_size 10
+chl clade_marker_color #8DEEEE
+msp clade_marker_size 10
+msp clade_marker_color #9ACD32
+tws clade_marker_size 10
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+msk clade_marker_size 10
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+chu clade_marker_size 10
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+msi clade_marker_size 10
+msi clade_marker_color #800080
+pmm clade_marker_size 10
+pmm clade_marker_color #006400
+chy clade_marker_size 10
+chy clade_marker_color #808080
+ayw clade_marker_size 10
+ayw clade_marker_color #191970
+mmb clade_marker_size 10
+mmb clade_marker_color #B0171F
+spr clade_marker_size 10
+spr clade_marker_color #808080
+ooe clade_marker_size 10
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+vpr clade_marker_size 10
+vpr clade_marker_color #808080
+pfl clade_marker_size 10
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+pfo clade_marker_size 10
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+vpe clade_marker_size 10
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+pfs clade_marker_size 10
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+pfr clade_marker_size 10
+pfr clade_marker_color #9ACD32
+pfu clade_marker_size 10
+pfu clade_marker_color #800080
+eru clade_marker_size 10
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+erw clade_marker_size 10
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+car clade_marker_size 10
+car clade_marker_color #9ACD32
+fba clade_marker_size 10
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+det clade_marker_size 10
+det clade_marker_color #8DEEEE
+swo clade_marker_size 10
+swo clade_marker_color #808080
+cat clade_marker_size 10
+cat clade_marker_color #87CEFA
+deh clade_marker_size 10
+deh clade_marker_color #8DEEEE
+ere clade_marker_size 10
+ere clade_marker_color #808080
+erg clade_marker_size 10
+erg clade_marker_color #B0171F
+cac clade_marker_size 10
+cac clade_marker_color #808080
+cab clade_marker_size 10
+cab clade_marker_color #FFC125
+deb clade_marker_size 10
+deb clade_marker_color #8DEEEE
+deg clade_marker_size 10
+deg clade_marker_color #8DEEEE
+spx clade_marker_size 10
+spx clade_marker_color #808080
+spy clade_marker_size 10
+spy clade_marker_color #808080
+spz clade_marker_size 10
+spz clade_marker_color #808080
+xca clade_marker_size 10
+xca clade_marker_color #B0171F
+spn clade_marker_size 10
+spn clade_marker_color #808080
+spp clade_marker_size 10
+spp clade_marker_color #808080
+bgl clade_marker_size 10
+bgl clade_marker_color #B0171F
+sps clade_marker_size 10
+sps clade_marker_color #808080
+spt clade_marker_size 10
+spt clade_marker_color #B0171F
+sah clade_marker_size 10
+sah clade_marker_color #808080
+sph clade_marker_size 10
+sph clade_marker_color #808080
+spi clade_marker_size 10
+spi clade_marker_color #808080
+spj clade_marker_size 10
+spj clade_marker_color #808080
+spk clade_marker_size 10
+spk clade_marker_color #808080
+xcv clade_marker_size 10
+xcv clade_marker_color #B0171F
+spm clade_marker_size 10
+spm clade_marker_color #808080
+hhe clade_marker_size 10
+hhe clade_marker_color #B0171F
+tac clade_marker_size 10
+tac clade_marker_color #800080
+tal clade_marker_size 10
+tal clade_marker_color #EE6A50
+spa clade_marker_size 10
+spa clade_marker_color #808080
+nth clade_marker_size 10
+nth clade_marker_color #808080
+spc clade_marker_size 10
+spc clade_marker_color #B0171F
+spb clade_marker_size 10
+spb clade_marker_color #808080
+spf clade_marker_size 10
+spf clade_marker_color #808080
+spg clade_marker_size 10
+spg clade_marker_color #808080
+afl clade_marker_size 10
+afl clade_marker_color #808080
+enc clade_marker_size 10
+enc clade_marker_color #B0171F
+sit clade_marker_size 10
+sit clade_marker_color #B0171F
+cse clade_marker_size 10
+cse clade_marker_color #B0171F
+afe clade_marker_size 10
+afe clade_marker_color #B0171F
+siy clade_marker_size 10
+siy clade_marker_color #800000
+bcq clade_marker_size 10
+bcq clade_marker_color #808080
+csa clade_marker_size 10
+csa clade_marker_color #B0171F
+krh clade_marker_size 10
+krh clade_marker_color #9ACD32
+csc clade_marker_size 10
+csc clade_marker_color #808080
+spe clade_marker_size 10
+spe clade_marker_color #B0171F
+pmi clade_marker_size 10
+pmi clade_marker_color #006400
+sia clade_marker_size 10
+sia clade_marker_color #800000
+ent clade_marker_size 10
+ent clade_marker_color #B0171F
+gct clade_marker_size 10
+gct clade_marker_color #808080
+fps clade_marker_size 10
+fps clade_marker_color #87CEFA
+sid clade_marker_size 10
+sid clade_marker_color #800000
+cst clade_marker_size 10
+cst clade_marker_color #808080
+afw clade_marker_size 10
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+saf clade_marker_color #EE6A50
+mtt clade_marker_size 10
+mtt clade_marker_color #87CEFA
+mtu clade_marker_size 10
+mtu clade_marker_color #9ACD32
+bcd clade_marker_size 10
+bcd clade_marker_color #B0171F
+dmr clade_marker_size 10
+dmr clade_marker_color #7B68EE
+dmu clade_marker_size 10
+dmu clade_marker_color #800000
+cpa clade_marker_size 10
+cpa clade_marker_color #FFC125
+mtb clade_marker_size 10
+mtb clade_marker_color #9ACD32
+mtc clade_marker_size 10
+mtc clade_marker_color #9ACD32
+mta clade_marker_size 10
+mta clade_marker_color #808080
+mtf clade_marker_size 10
+mtf clade_marker_color #9ACD32
+cpb clade_marker_size 10
+cpb clade_marker_color #D15FEE
+cbc clade_marker_size 10
+cbc clade_marker_color #B0171F
+rva clade_marker_size 10
+rva clade_marker_color #B0171F
+cpc clade_marker_size 10
+cpc clade_marker_color #D15FEE
+cbf clade_marker_size 10
+cbf clade_marker_color #808080
+cbg clade_marker_size 10
+cbg clade_marker_color #B0171F
+cbd clade_marker_size 10
+cbd clade_marker_color #B0171F
+cbe clade_marker_size 10
+cbe clade_marker_color #808080
+cbk clade_marker_size 10
+cbk clade_marker_color #808080
+cbh clade_marker_size 10
+cbh clade_marker_color #808080
+cbi clade_marker_size 10
+cbi clade_marker_color #808080
+cbo clade_marker_size 10
+cbo clade_marker_color #808080
+bca clade_marker_size 10
+bca clade_marker_color #808080
+cbt clade_marker_size 10
+cbt clade_marker_color #808080
+cbu clade_marker_size 10
+cbu clade_marker_color #B0171F
+cby clade_marker_size 10
+cby clade_marker_color #808080
+hpy clade_marker_size 10
+hpy clade_marker_color #B0171F
+mci clade_marker_size 10
+mci clade_marker_color #B0171F
+hps clade_marker_size 10
+hps clade_marker_color #B0171F
+oan clade_marker_size 10
+oan clade_marker_color #B0171F
+hpp clade_marker_size 10
+hpp clade_marker_color #B0171F
+nam clade_marker_size 10
+nam clade_marker_color #B0171F
+nar clade_marker_size 10
+nar clade_marker_color #B0171F
+hpj clade_marker_size 10
+hpj clade_marker_color #B0171F
+tin clade_marker_size 10
+tin clade_marker_color #B0171F
+tpt clade_marker_size 10
+tpt clade_marker_color #00CD00
+hpl clade_marker_size 10
+hpl clade_marker_color #B0171F
+naz clade_marker_size 10
+naz clade_marker_color #006400
+hpb clade_marker_size 10
+hpb clade_marker_color #B0171F
+hpa clade_marker_size 10
+hpa clade_marker_color #B0171F
+hpg clade_marker_size 10
+hpg clade_marker_color #B0171F
+bcy clade_marker_size 10
+bcy clade_marker_color #808080
+tam clade_marker_size 10
+tam clade_marker_color #EE6A50
+lga clade_marker_size 10
+lga clade_marker_color #808080
+vcj clade_marker_size 10
+vcj clade_marker_color #B0171F
+tpp clade_marker_size 10
+tpp clade_marker_color #B0171F
+hwa clade_marker_size 10
+hwa clade_marker_color #800080
+kvu clade_marker_size 10
+kvu clade_marker_color #B0171F
+bcv clade_marker_size 10
+bcv clade_marker_color #9ACD32
+bcl clade_marker_size 10
+bcl clade_marker_color #808080
+cpi clade_marker_size 10
+cpi clade_marker_color #87CEFA
+cpj clade_marker_size 10
+cpj clade_marker_color #FFC125
+bco clade_marker_size 10
+bco clade_marker_color #808080
+hne clade_marker_size 10
+hne clade_marker_color #B0171F
+bci clade_marker_size 10
+bci clade_marker_color #B0171F
+cpn clade_marker_size 10
+cpn clade_marker_color #FFC125
+cpo clade_marker_size 10
+cpo clade_marker_color #808080
+eok clade_marker_size 10
+eok clade_marker_color #B0171F
+eoj clade_marker_size 10
+eoj clade_marker_color #B0171F
+eoi clade_marker_size 10
+eoi clade_marker_color #B0171F
+eoh clade_marker_size 10
+eoh clade_marker_color #B0171F
+cpe clade_marker_size 10
+cpe clade_marker_color #808080
+cpf clade_marker_size 10
+cpf clade_marker_color #808080
+agr clade_marker_size 10
+agr clade_marker_color #B0171F
+rxy clade_marker_size 10
+rxy clade_marker_color #9ACD32
+vch clade_marker_size 10
+vch clade_marker_color #B0171F
+xbo clade_marker_size 10
+xbo clade_marker_color #B0171F
+wvi clade_marker_size 10
+wvi clade_marker_color #87CEFA
+bcx clade_marker_size 10
+bcx clade_marker_color #808080
+fsu clade_marker_size 10
+fsu clade_marker_color k
+bcz clade_marker_size 10
+bcz clade_marker_color #808080
+dvu clade_marker_size 10
+dvu clade_marker_color #B0171F
+vpa clade_marker_size 10
+vpa clade_marker_color #B0171F
+cpr clade_marker_size 10
+cpr clade_marker_color #808080
+cps clade_marker_size 10
+cps clade_marker_color #B0171F
+cpt clade_marker_size 10
+cpt clade_marker_color #FFC125
+cpu clade_marker_size 10
+cpu clade_marker_color #9ACD32
+Streptococcus annotation *:Streptococcus
+Streptococcus annotation_background_color #808080
+Bacillus annotation Bacillus
+Bacillus annotation_background_color #808080
+Mycoplasma annotation *:Mycoplasma
+Mycoplasma annotation_background_color #191970
+Staphylococcus annotation *:Staphylococcus
+Staphylococcus annotation_background_color #808080
+Lactobacillus annotation *:Lactobacillus
+Lactobacillus annotation_background_color #808080
+Escherichia annotation *:Escherichia
+Escherichia annotation_background_color #C40F0F
+Clostridium annotation Clostridium
+Clostridium annotation_background_color #808080
+Burkholderia annotation *:Burkholderia
+Burkholderia annotation_background_color #C40F0F
+Pseudomonas annotation *:Pseudomonas
+Pseudomonas annotation_background_color #C40F0F
+Salmonella annotation *:Salmonella
+Salmonella annotation_background_color #C40F0F
+Mycobacterium annotation *:Mycobacterium
+Mycobacterium annotation_background_color #9ACD32
+Helicobacter annotation *:Helicobacter
+Helicobacter annotation_background_color #C40F0F
+Bifidobacterium annotation *:Bifidobacterium
+Bifidobacterium annotation_background_color #9ACD32
+Yersinia annotation *:Yersinia
+Yersinia annotation_background_color #C40F0F
+Vibrio annotation *:Vibrio
+Vibrio annotation_background_color #C40F0F
+Sulfolobus annotation Sulfolobus
+Sulfolobus annotation_background_color #800000
+Enterobacter annotation *:Enterobacter
+Enterobacter annotation_background_color #C40F0F
+Enterococcus annotation *:Enterococcus
+Enterococcus annotation_background_color #808080
+Bacteroides annotation Bacteroides
+Bacteroides annotation_background_color #87CEFA
+Shewanella annotation *:Shewanella
+Shewanella annotation_background_color #C40F0F
+Rickettsia annotation Rickettsia
+Rickettsia annotation_background_color #C40F0F
+Corynebacterium annotation *:Corynebacterium
+Corynebacterium annotation_background_color #9ACD32
+Campylobacter annotation *:Campylobacter
+Campylobacter annotation_background_color #C40F0F
+Xanthomonas annotation *:Xanthomonas
+Xanthomonas annotation_background_color #C40F0F
+Synechococcus annotation Synechococcus
+Synechococcus annotation_background_color #006400
+Haemophilus annotation *:Haemophilus
+Haemophilus annotation_background_color #C40F0F
+Chlamydophila annotation Chlamydophila
+Chlamydophila annotation_background_color #FEC80A
+Brucella annotation Brucella
+Brucella annotation_background_color #C40F0F
+title ATP synthesis & Fatty acid metabolism
+ring_internal_separator_thickness 1 0.3
+ring_height 1 0.08
+pto ring_color 1 #339933
+vmo ring_color 1 #339933
+bvu ring_color 1 #339933
+osp ring_color 1 #339933
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+mfs ring_color 1 #339933
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+mfv ring_color 1 #339933
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+tsc ring_color 1 #339933
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+ring_height 2 0.08
+pto ring_color 2 #339933
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+ring_height 3 0.08
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+msi ring_color 3 #339933
+eha ring_color 3 #339933
+ral ring_color 3 #339933
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diff --git a/examples/kegg/ppa_kegg_raxml.names.nn.nwk b/examples/kegg/ppa_kegg_raxml.names.nn.nwk
new file mode 100644
index 0000000..c901381
--- /dev/null
+++ b/examples/kegg/ppa_kegg_raxml.names.nn.nwk
@@ -0,0 +1,6873 @@
+<phy:phyloxml xmlns:phy="http://www.phyloxml.org">
+ <phy:phylogeny rooted="true">
+ <phy:clade>
+ <phy:branch_length>0.0</phy:branch_length>
+ <phy:clade>
+ <phy:branch_length>0.374947178318</phy:branch_length>
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+ <phy:clade>
+ <phy:branch_length>0.0623621924103</phy:branch_length>
+ <phy:clade>
+ <phy:branch_length>0.133221939331</phy:branch_length>
+ <phy:clade>
+ <phy:branch_length>0.0914120894181</phy:branch_length>
+ <phy:clade>
+ <phy:branch_length>0.0561429742786</phy:branch_length>
+ <phy:clade>
+ <phy:branch_length>0.0683441241422</phy:branch_length>
+ <phy:clade>
+ <phy:branch_length>0.134304172279</phy:branch_length>
+ <phy:clade>
+ <phy:branch_length>0.348631306029</phy:branch_length>
+ <phy:clade>
+ <phy:branch_length>0.277623496975</phy:branch_length>
+ <phy:clade>
+ <phy:branch_length>0.103199342778</phy:branch_length>
+ <phy:clade>
+ <phy:branch_length>0.356949308307</phy:branch_length>
+ <phy:clade>
+ <phy:branch_length>0.0767037544104</phy:branch_length>
+ <phy:clade>
+ <phy:branch_length>0.0774044028198</phy:branch_length>
+ <phy:clade>
+ <phy:branch_length>0.0952506981977</phy:branch_length>
+ <phy:clade>
+ <phy:branch_length>0.107768665924</phy:branch_length>
+ <phy:clade>
+ <phy:name>Staphylococcus</phy:name>
+ <phy:branch_length>0.67722864614</phy:branch_length>
+ <phy:clade>
+ <phy:branch_length>0.0762475152155</phy:branch_length>
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+ <phy:branch_length>0.159557681146</phy:branch_length>
+ <phy:clade>
+ <phy:name>sab</phy:name>
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+ <phy:name>sam</phy:name>
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+ <phy:name>sac</phy:name>
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+ <phy:name>Enterococcus</phy:name>
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+ <phy:name>iho</phy:name>
+ <phy:branch_length>0.994724557685</phy:branch_length>
+ </phy:clade>
+ <phy:clade>
+ <phy:branch_length>0.202497600041</phy:branch_length>
+ <phy:clade>
+ <phy:name>asc</phy:name>
+ <phy:branch_length>0.656712994516</phy:branch_length>
+ </phy:clade>
+ <phy:clade>
+ <phy:name>ape</phy:name>
+ <phy:branch_length>0.773607611052</phy:branch_length>
+ </phy:clade>
+ </phy:clade>
+ </phy:clade>
+ <phy:clade>
+ <phy:branch_length>0.563788559976</phy:branch_length>
+ <phy:clade>
+ <phy:name>shc</phy:name>
+ <phy:branch_length>0.38725905749</phy:branch_length>
+ </phy:clade>
+ <phy:clade>
+ <phy:branch_length>0.20526303781</phy:branch_length>
+ <phy:clade>
+ <phy:name>dmu</phy:name>
+ <phy:branch_length>0.393123696425</phy:branch_length>
+ </phy:clade>
+ <phy:clade>
+ <phy:name>tag</phy:name>
+ <phy:branch_length>0.402250313479</phy:branch_length>
+ </phy:clade>
+ </phy:clade>
+ </phy:clade>
+ </phy:clade>
+ <phy:clade>
+ <phy:branch_length>0.615018896979</phy:branch_length>
+ <phy:clade>
+ <phy:name>Sulfolobus</phy:name>
+ <phy:branch_length>0.0750785973146</phy:branch_length>
+ <phy:clade>
+ <phy:branch_length>0.11111353196</phy:branch_length>
+ <phy:clade>
+ <phy:name>sai</phy:name>
+ <phy:branch_length>0.374496859878</phy:branch_length>
+ </phy:clade>
+ <phy:clade>
+ <phy:name>sto</phy:name>
+ <phy:branch_length>0.263256547609</phy:branch_length>
+ </phy:clade>
+ </phy:clade>
+ <phy:clade>
+ <phy:branch_length>0.381503583991</phy:branch_length>
+ <phy:clade>
+ <phy:name>sso</phy:name>
+ <phy:branch_length>0.0502589500962</phy:branch_length>
+ </phy:clade>
+ <phy:clade>
+ <phy:branch_length>0.05040073778</phy:branch_length>
+ <phy:clade>
+ <phy:name>sis</phy:name>
+ <phy:branch_length>0.00521621088913</phy:branch_length>
+ </phy:clade>
+ <phy:clade>
+ <phy:branch_length>0.00151541351362</phy:branch_length>
+ <phy:clade>
+ <phy:branch_length>0.00864286242193</phy:branch_length>
+ <phy:clade>
+ <phy:name>siy</phy:name>
+ <phy:branch_length>0.00488412283647</phy:branch_length>
+ </phy:clade>
+ <phy:clade>
+ <phy:branch_length>0.00559515059922</phy:branch_length>
+ <phy:clade>
+ <phy:name>sid</phy:name>
+ <phy:branch_length>0.00135484487724</phy:branch_length>
+ </phy:clade>
+ <phy:clade>
+ <phy:branch_length>0.00262231027358</phy:branch_length>
+ <phy:clade>
+ <phy:name>sia</phy:name>
+ <phy:branch_length>0.000676133986658</phy:branch_length>
+ </phy:clade>
+ <phy:clade>
+ <phy:name>sim</phy:name>
+ <phy:branch_length>0.00327992240267</phy:branch_length>
+ </phy:clade>
+ </phy:clade>
+ </phy:clade>
+ </phy:clade>
+ <phy:clade>
+ <phy:name>sin</phy:name>
+ <phy:branch_length>0.0169848773593</phy:branch_length>
+ </phy:clade>
+ </phy:clade>
+ </phy:clade>
+ </phy:clade>
+ </phy:clade>
+ <phy:clade>
+ <phy:branch_length>0.0891740337131</phy:branch_length>
+ <phy:clade>
+ <phy:name>mse</phy:name>
+ <phy:branch_length>0.451373097804</phy:branch_length>
+ </phy:clade>
+ </phy:clade>
+ </phy:clade>
+ </phy:clade>
+ </phy:clade>
+ </phy:clade>
+ </phy:clade>
+ </phy:clade>
+ <phy:clade>
+ <phy:name>csy</phy:name>
+ <phy:branch_length>1.85577092252</phy:branch_length>
+ </phy:clade>
+ </phy:clade>
+ <phy:clade>
+ <phy:branch_length>0.204833809562</phy:branch_length>
+ <phy:clade>
+ <phy:branch_length>0.501507249477</phy:branch_length>
+ <phy:clade>
+ <phy:branch_length>0.103070127508</phy:branch_length>
+ <phy:clade>
+ <phy:name>mae</phy:name>
+ <phy:branch_length>0.403657252535</phy:branch_length>
+ </phy:clade>
+ <phy:clade>
+ <phy:branch_length>0.127907723667</phy:branch_length>
+ <phy:clade>
+ <phy:branch_length>0.162787924931</phy:branch_length>
+ <phy:clade>
+ <phy:branch_length>0.141993103162</phy:branch_length>
+ <phy:clade>
+ <phy:name>mmz</phy:name>
+ <phy:branch_length>0.0473351212992</phy:branch_length>
+ </phy:clade>
+ <phy:clade>
+ <phy:name>mmp</phy:name>
+ <phy:branch_length>0.0601082339369</phy:branch_length>
+ </phy:clade>
+ </phy:clade>
+ <phy:clade>
+ <phy:name>mvn</phy:name>
+ <phy:branch_length>0.234740504412</phy:branch_length>
+ </phy:clade>
+ </phy:clade>
+ <phy:clade>
+ <phy:name>mvo</phy:name>
+ <phy:branch_length>0.412887585524</phy:branch_length>
+ </phy:clade>
+ </phy:clade>
+ </phy:clade>
+ <phy:clade>
+ <phy:branch_length>0.0852486285184</phy:branch_length>
+ <phy:clade>
+ <phy:branch_length>0.158160275442</phy:branch_length>
+ <phy:clade>
+ <phy:name>mif</phy:name>
+ <phy:branch_length>0.347620003186</phy:branch_length>
+ </phy:clade>
+ <phy:clade>
+ <phy:branch_length>0.111066569656</phy:branch_length>
+ <phy:clade>
+ <phy:branch_length>0.036331181495</phy:branch_length>
+ <phy:clade>
+ <phy:name>mfs</phy:name>
+ <phy:branch_length>0.0524954084981</phy:branch_length>
+ </phy:clade>
+ <phy:clade>
+ <phy:name>mja</phy:name>
+ <phy:branch_length>0.0392493471423</phy:branch_length>
+ </phy:clade>
+ </phy:clade>
+ <phy:clade>
+ <phy:name>mvu</phy:name>
+ <phy:branch_length>0.127607859291</phy:branch_length>
+ </phy:clade>
+ </phy:clade>
+ </phy:clade>
+ </phy:clade>
+ </phy:clade>
+ <phy:clade>
+ <phy:branch_length>0.109780086317</phy:branch_length>
+ <phy:clade>
+ <phy:name>mka</phy:name>
+ <phy:branch_length>1.10200337292</phy:branch_length>
+ </phy:clade>
+ <phy:clade>
+ <phy:branch_length>0.310651853439</phy:branch_length>
+ <phy:clade>
+ <phy:name>mfv</phy:name>
+ <phy:branch_length>0.454330895863</phy:branch_length>
+ </phy:clade>
+ <phy:clade>
+ <phy:branch_length>0.150245430399</phy:branch_length>
+ <phy:clade>
+ <phy:name>mth</phy:name>
+ <phy:branch_length>0.496402065773</phy:branch_length>
+ </phy:clade>
+ <phy:clade>
+ <phy:branch_length>0.0979748157872</phy:branch_length>
+ <phy:clade>
+ <phy:branch_length>0.183046184036</phy:branch_length>
+ <phy:clade>
+ <phy:name>mel</phy:name>
+ <phy:branch_length>0.291514730251</phy:branch_length>
+ </phy:clade>
+ </phy:clade>
+ <phy:clade>
+ <phy:branch_length>0.182329893864</phy:branch_length>
+ <phy:clade>
+ <phy:name>msi</phy:name>
+ <phy:branch_length>0.608654256612</phy:branch_length>
+ </phy:clade>
+ <phy:clade>
+ <phy:name>mst</phy:name>
+ <phy:branch_length>0.627390915873</phy:branch_length>
+ </phy:clade>
+ </phy:clade>
+ </phy:clade>
+ </phy:clade>
+ </phy:clade>
+ </phy:clade>
+ </phy:clade>
+ </phy:clade>
+ <phy:clade>
+ <phy:branch_length>0.111719257269</phy:branch_length>
+ <phy:clade>
+ <phy:name>afu</phy:name>
+ <phy:branch_length>1.02193506319</phy:branch_length>
+ </phy:clade>
+ <phy:clade>
+ <phy:branch_length>0.0548782525181</phy:branch_length>
+ <phy:clade>
+ <phy:branch_length>0.0822068361369</phy:branch_length>
+ <phy:clade>
+ <phy:branch_length>0.621298705215</phy:branch_length>
+ <phy:clade>
+ <phy:name>mhu</phy:name>
+ <phy:branch_length>0.657057747638</phy:branch_length>
+ </phy:clade>
+ <phy:clade>
+ <phy:name>mbn</phy:name>
+ <phy:branch_length>0.590521537084</phy:branch_length>
+ </phy:clade>
+ </phy:clade>
+ <phy:clade>
+ <phy:branch_length>0.138234775102</phy:branch_length>
+ <phy:clade>
+ <phy:branch_length>0.376415750115</phy:branch_length>
+ <phy:clade>
+ <phy:branch_length>0.359764410107</phy:branch_length>
+ <phy:clade>
+ <phy:branch_length>0.0646221651413</phy:branch_length>
+ <phy:clade>
+ <phy:name>mac</phy:name>
+ <phy:branch_length>0.106363589555</phy:branch_length>
+ </phy:clade>
+ <phy:clade>
+ <phy:name>mma</phy:name>
+ <phy:branch_length>0.128092135327</phy:branch_length>
+ </phy:clade>
+ </phy:clade>
+ <phy:clade>
+ <phy:name>mba</phy:name>
+ <phy:branch_length>0.133438185764</phy:branch_length>
+ </phy:clade>
+ </phy:clade>
+ <phy:clade>
+ <phy:branch_length>0.16156910283</phy:branch_length>
+ <phy:clade>
+ <phy:name>mev</phy:name>
+ <phy:branch_length>0.428981387274</phy:branch_length>
+ </phy:clade>
+ <phy:clade>
+ <phy:branch_length>0.0897496761456</phy:branch_length>
+ <phy:clade>
+ <phy:name>mbu</phy:name>
+ <phy:branch_length>0.362104944355</phy:branch_length>
+ </phy:clade>
+ <phy:clade>
+ <phy:name>mmh</phy:name>
+ <phy:branch_length>0.408522762332</phy:branch_length>
+ </phy:clade>
+ </phy:clade>
+ </phy:clade>
+ </phy:clade>
+ <phy:clade>
+ <phy:name>rci</phy:name>
+ <phy:branch_length>0.882929949367</phy:branch_length>
+ </phy:clade>
+ </phy:clade>
+ </phy:clade>
+ <phy:clade>
+ <phy:branch_length>1.36584525205</phy:branch_length>
+ <phy:clade>
+ <phy:name>nph</phy:name>
+ <phy:branch_length>0.272643860087</phy:branch_length>
+ </phy:clade>
+ <phy:clade>
+ <phy:branch_length>0.0663799437647</phy:branch_length>
+ <phy:clade>
+ <phy:name>hal</phy:name>
+ <phy:branch_length>0.451537533411</phy:branch_length>
+ </phy:clade>
+ <phy:clade>
+ <phy:branch_length>0.0573595018625</phy:branch_length>
+ <phy:clade>
+ <phy:name>hje</phy:name>
+ <phy:branch_length>0.40387712562</phy:branch_length>
+ </phy:clade>
+ <phy:clade>
+ <phy:branch_length>0.0633888217</phy:branch_length>
+ <phy:clade>
+ <phy:branch_length>0.0627473742581</phy:branch_length>
+ <phy:clade>
+ <phy:name>nmg</phy:name>
+ <phy:branch_length>0.34939327656</phy:branch_length>
+ </phy:clade>
+ <phy:clade>
+ <phy:name>hma</phy:name>
+ <phy:branch_length>0.348837340082</phy:branch_length>
+ </phy:clade>
+ </phy:clade>
+ <phy:clade>
+ <phy:branch_length>0.0632850649618</phy:branch_length>
+ <phy:clade>
+ <phy:branch_length>0.0831844965823</phy:branch_length>
+ <phy:clade>
+ <phy:name>hwa</phy:name>
+ <phy:branch_length>0.377127351443</phy:branch_length>
+ </phy:clade>
+ <phy:clade>
+ <phy:branch_length>0.0830279495737</phy:branch_length>
+ <phy:clade>
+ <phy:name>hvo</phy:name>
+ <phy:branch_length>0.242052614116</phy:branch_length>
+ </phy:clade>
+ <phy:clade>
+ <phy:name>hbo</phy:name>
+ <phy:branch_length>0.176995825012</phy:branch_length>
+ </phy:clade>
+ </phy:clade>
+ </phy:clade>
+ <phy:clade>
+ <phy:name>hla</phy:name>
+ <phy:branch_length>0.363846427412</phy:branch_length>
+ </phy:clade>
+ </phy:clade>
+ </phy:clade>
+ </phy:clade>
+ </phy:clade>
+ </phy:clade>
+ </phy:clade>
+ </phy:clade>
+ </phy:clade>
+ </phy:clade>
+ </phy:phylogeny>
+</phy:phyloxml>
\ No newline at end of file
diff --git a/examples/kegg/run.sh b/examples/kegg/run.sh
new file mode 100755
index 0000000..85ec800
--- /dev/null
+++ b/examples/kegg/run.sh
@@ -0,0 +1,3 @@
+#!/bin/bash
+graphlan_annotate.py --annot annot.txt ppa_kegg_raxml.names.nn.nwk kegg.xml
+graphlan.py --dpi 300 kegg.xml kegg.png
diff --git a/examples/metaref_fams/mr1.a.txt b/examples/metaref_fams/mr1.a.txt
new file mode 100644
index 0000000..6e22f62
--- /dev/null
+++ b/examples/metaref_fams/mr1.a.txt
@@ -0,0 +1,138 @@
+branch_color_from_ancestor 0
+title A maximal core gene for clade Y
+title_font_size 11
+annotation_background_offset -0.26
+annotation_background_separation 0.1
+branch_bracket_width 0.5
+branch_bracket_depth 0.75
+c1 clade_marker_color #FF0000
+c1 clade_marker_size 35
+c1 class_label Genomes containing gene X
+c11 clade_marker_color #00FFFF
+c11 clade_marker_size 35
+c11 class_label Genomes containing gene X
+c2 clade_marker_color #0000FF
+c2 clade_marker_size 35
+c3 clade_marker_color #00FF00
+c3 clade_marker_size 35
+#class2 annotation_background_color #0000FF
+#class2 class_label Clades in which X is a core gene
+clade_marker_size 10
+branch_thickness 0.5
+Bacill.Bacillale class c3
+Bacill.Bacillale.Staphylococcaceae.Gemella class c1
+Bacill.Bacillale.Staphylococcaceae class c1
+Bacill.Bacillale.Staphylococcaceae.Jeotgalicoccus class c1
+Bacill.Bacillale.Staphylococcaceae.Macrococcus class c1
+Bacill.Bacillale.Staphylococcaceae.Staphylococcus class c1
+Bacill.Bacillale.Staphylococcaceae.unclassified class c1
+Bacill.Bacillale.Staphylococcaceae.Macrococcus class c1
+Bacill.Bacillale.unclassified.AA class c1
+Bacill.Bacillale.unclassified class c1
+Bacill.Bacillale.Thermoactinomycetaceae.Planifilum class c1
+Bacill.Bacillale.Thermoactinomycetaceae.Thermoactinomyces class c1
+Bacill.Bacillale.Thermoactinomycetaceae.unclassified class c1
+Bacill.Bacillale.Thermoactinomycetaceae class c1
+Bacilli.Lactobacillales.Aerococcaceae.Eremococcus class c11
+Bacilli.Lactobacillales.Carnobacteriaceae.Carnobacterium class c11
+Bacilli.Lactobacillales.Carnobacteriaceae.Desemzia class c11
+Clostridia.Clostridiales.Incertae_Sedis_XI.Finegoldia class c11
+Clostridia.Clostridiales.Incertae_Sedis_XI.Gallicola class c11
+Clostridia.Clostridiales.Incertae_Sedis_XI.Helcococcus class c11
+Clostridia.Clostridiales.Incertae_Sedis_XI.Peptoniphilus class c11
+Clostridi.Clostridiales.Ruminococcaceae.Papillibacter class c11
+Clostridi.Clostridiale.Veillonellaceae.Selenomonas class c11
+Clostridia.Thermoanaerobacterales.Thermoanaerobacteraceae.Thermoanaerobacterium class c11
+#Bacill.Bacillale.Staphylococcaceae class class2
+#Bacill.Bacillale.Thermoactinomycetaceae class class2
+#Bacill.Bacillale class class2
+Bacill.Bacillale annotation Y
+Bacill.Bacillale.Staphylococcaceae annotation Y1
+Bacill.Bacillale.Thermoactinomycetaceae annotation Y2
+Bacill.Bacillale.unclassified annotation Y3
+Bacilli.Lactobacillales.Aerococcaceae class c2
+Bacilli.Lactobacillales.Aerococcaceae.Aerococcus class c2
+Bacilli.Lactobacillales.Aerococcaceae.Eremococcus class c2
+Bacilli.Lactobacillales.Aerococcaceae.unclassified class c2
+Bacilli.Lactobacillales.Aerococcaceae.Abiotrophia class c2
+
+Bacill.Bacillale.Staphylococcaceae.Gemella ring_shape 1 v
+Bacill.Bacillale.Staphylococcaceae.Jeotgalicoccus ring_shape 1 v
+Bacill.Bacillale.Staphylococcaceae.Macrococcus ring_shape 1 v
+Bacill.Bacillale.Staphylococcaceae.Staphylococcus ring_shape 1 v
+Bacill.Bacillale.Staphylococcaceae.unclassified ring_shape 1 v
+Bacill.Bacillale.Staphylococcaceae.Macrococcus ring_shape 1 v
+Bacill.Bacillale.unclassified.AA ring_shape 1 v
+Bacill.Bacillale.Thermoactinomycetaceae.Planifilum ring_shape 1 v
+Bacill.Bacillale.Thermoactinomycetaceae.Thermoactinomyces ring_shape 1 v
+Bacill.Bacillale.Thermoactinomycetaceae.unclassified ring_shape 1 v
+Bacilli.Lactobacillales.Aerococcaceae.Eremococcus ring_shape 1 v
+Bacilli.Lactobacillales.Carnobacteriaceae.Carnobacterium ring_shape 1 v
+Bacilli.Lactobacillales.Carnobacteriaceae.Desemzia ring_shape 1 v
+Bacilli.Lactobacillales.Lactobacillaceae.Lactobacillus ring_shape 1 v
+Bacilli.Lactobacillales.Lactobacillaceae.Pediococcus ring_shape 1 v
+Clostridia.Clostridiales.Incertae_Sedis_XI.Finegoldia ring_shape 1 v
+Clostridia.Clostridiales.Incertae_Sedis_XI.Gallicola ring_shape 1 v
+Clostridia.Clostridiales.Incertae_Sedis_XI.Helcococcus ring_shape 1 v
+Clostridia.Clostridiales.Incertae_Sedis_XI.Peptoniphilus ring_shape 1 v
+Clostridi.Clostridiales.Ruminococcaceae.Papillibacter ring_shape 1 v
+Clostridi.Clostridiale.Veillonellaceae.Selenomonas ring_shape 1 v
+Clostridia.Thermoanaerobacterales.Thermoanaerobacteraceae.Thermoanaerobacterium ring_shape 1 v
+Bacilli.Lactobacillales.Aerococcaceae.Aerococcus ring_shape 1 v
+Bacilli.Lactobacillales.Aerococcaceae.Eremococcus ring_shape 1 v
+Bacilli.Lactobacillales.Aerococcaceae.unclassified ring_shape 1 v
+Bacilli.Lactobacillales.Aerococcaceae.Abiotrophia ring_shape 1 v
+
+Bacill.Bacillale.Staphylococcaceae.Gemella ring_width 1 0.6
+Bacill.Bacillale.Staphylococcaceae.Jeotgalicoccus ring_width 1 0.6
+Bacill.Bacillale.Staphylococcaceae.Macrococcus ring_width 1 0.6
+Bacill.Bacillale.Staphylococcaceae.Staphylococcus ring_width 1 0.6
+Bacill.Bacillale.Staphylococcaceae.unclassified ring_width 1 0.6
+Bacill.Bacillale.Staphylococcaceae.Macrococcus ring_width 1 0.6
+Bacill.Bacillale.unclassified.AA ring_width 1 0.6
+Bacill.Bacillale.Thermoactinomycetaceae.Planifilum ring_width 1 0.6
+Bacill.Bacillale.Thermoactinomycetaceae.Thermoactinomyces ring_width 1 0.6
+Bacill.Bacillale.Thermoactinomycetaceae.unclassified ring_width 1 0.6
+Bacilli.Lactobacillales.Aerococcaceae.Eremococcus ring_width 1 0.6
+Bacilli.Lactobacillales.Carnobacteriaceae.Carnobacterium ring_width 1 0.6
+Bacilli.Lactobacillales.Carnobacteriaceae.Desemzia ring_width 1 0.6
+Bacilli.Lactobacillales.Lactobacillaceae.Lactobacillus ring_width 1 0.6
+Bacilli.Lactobacillales.Lactobacillaceae.Pediococcus ring_width 1 0.6
+Clostridia.Clostridiales.Incertae_Sedis_XI.Finegoldia ring_width 1 0.6
+Clostridia.Clostridiales.Incertae_Sedis_XI.Gallicola ring_width 1 0.6
+Clostridia.Clostridiales.Incertae_Sedis_XI.Helcococcus ring_width 1 0.6
+Clostridia.Clostridiales.Incertae_Sedis_XI.Peptoniphilus ring_width 1 0.6
+Clostridi.Clostridiales.Ruminococcaceae.Papillibacter ring_width 1 0.6
+Clostridi.Clostridiale.Veillonellaceae.Selenomonas ring_width 1 0.6
+Clostridia.Thermoanaerobacterales.Thermoanaerobacteraceae.Thermoanaerobacterium ring_width 1 0.6
+Bacilli.Lactobacillales.Aerococcaceae.Aerococcus ring_width 1 0.6
+Bacilli.Lactobacillales.Aerococcaceae.Eremococcus ring_width 1 0.6
+Bacilli.Lactobacillales.Aerococcaceae.unclassified ring_width 1 0.6
+Bacilli.Lactobacillales.Aerococcaceae.Abiotrophia ring_width 1 0.6
+
+Bacill.Bacillale.Staphylococcaceae.Gemella ring_height 1 0.6
+Bacill.Bacillale.Staphylococcaceae.Jeotgalicoccus ring_height 1 0.6
+Bacill.Bacillale.Staphylococcaceae.Macrococcus ring_height 1 0.6
+Bacill.Bacillale.Staphylococcaceae.Staphylococcus ring_height 1 0.6
+Bacill.Bacillale.Staphylococcaceae.unclassified ring_height 1 0.6
+Bacill.Bacillale.Staphylococcaceae.Macrococcus ring_height 1 0.6
+Bacill.Bacillale.unclassified.AA ring_height 1 0.6
+Bacill.Bacillale.Thermoactinomycetaceae.Planifilum ring_height 1 0.6
+Bacill.Bacillale.Thermoactinomycetaceae.Thermoactinomyces ring_height 1 0.6
+Bacill.Bacillale.Thermoactinomycetaceae.unclassified ring_height 1 0.6
+Bacilli.Lactobacillales.Aerococcaceae.Eremococcus ring_height 1 0.6
+Bacilli.Lactobacillales.Carnobacteriaceae.Carnobacterium ring_height 1 0.6
+Bacilli.Lactobacillales.Carnobacteriaceae.Desemzia ring_height 1 0.6
+Bacilli.Lactobacillales.Lactobacillaceae.Lactobacillus ring_height 1 0.6
+Bacilli.Lactobacillales.Lactobacillaceae.Pediococcus ring_height 1 0.6
+Clostridia.Clostridiales.Incertae_Sedis_XI.Finegoldia ring_height 1 0.6
+Clostridia.Clostridiales.Incertae_Sedis_XI.Gallicola ring_height 1 0.6
+Clostridia.Clostridiales.Incertae_Sedis_XI.Helcococcus ring_height 1 0.6
+Clostridia.Clostridiales.Incertae_Sedis_XI.Peptoniphilus ring_height 1 0.6
+Clostridi.Clostridiales.Ruminococcaceae.Papillibacter ring_height 1 0.6
+Clostridi.Clostridiale.Veillonellaceae.Selenomonas ring_height 1 0.6
+Clostridia.Thermoanaerobacterales.Thermoanaerobacteraceae.Thermoanaerobacterium ring_height 1 0.6
+Bacilli.Lactobacillales.Aerococcaceae.Aerococcus ring_height 1 0.6
+Bacilli.Lactobacillales.Aerococcaceae.Eremococcus ring_height 1 0.6
+Bacilli.Lactobacillales.Aerococcaceae.unclassified ring_height 1 0.6
+Bacilli.Lactobacillales.Aerococcaceae.Abiotrophia ring_height 1 0.6
diff --git a/examples/metaref_fams/mr1.txt b/examples/metaref_fams/mr1.txt
new file mode 100644
index 0000000..a83b2aa
--- /dev/null
+++ b/examples/metaref_fams/mr1.txt
@@ -0,0 +1,94 @@
+Bacilli.Bacillales.Bacillaceae
+Bacilli.Bacillales.Bacillaceae.Anoxybacillus
+Bacilli.Bacillales.Bacillaceae.Bacillus
+Bacilli.Bacillales.Bacillaceae.Exiguobacterium
+Bacilli.Bacillales.Bacillaceae.Geobacillus
+Bacilli.Bacillales.Bacillaceae.Tumebacillus
+Bacilli.Bacillales.Bacillaceae.unclassified
+Bacilli.Bacillales.Bacillaceae.Ureibacillus
+Bacilli.Bacillales.Bacillales_incertae_sedis
+Bacilli.Bacillales.Bacillales_incertae_sedis.Rummeliibacillus
+Bacilli.Bacillales
+Bacill
+Bacill.Bacillales
+Bacill.Bacillales.Paenibacillaceae
+Bacill.Bacillales.Paenibacillaceae.Ammoniphilus
+Bacill.Bacillales.Paenibacillaceae.Brevibacillus
+Bacill.Bacillales.Paenibacillaceae.Thermicanus
+Bacill.Bacillales.Paenibacillaceae.unclassified
+Bacill.Bacillales.Planococcaceae
+Bacill.Bacillales.Planococcaceae.Kurthia
+Bacill.Bacillales.Planococcaceae.Planomicrobium
+Bacill.Bacillales.Planococcaceae.Sporosarcina
+Bacill.Bacillales.Planococcaceae.unclassified
+Bacill.Bacillale
+Bacill.Bacillale.Staphylococcaceae
+Bacill.Bacillale.Staphylococcaceae.Gemella
+Bacill.Bacillale.Staphylococcaceae.Jeotgalicoccus
+Bacill.Bacillale.Staphylococcaceae.Macrococcus
+Bacill.Bacillale.Staphylococcaceae.Staphylococcus
+Bacill.Bacillale.Staphylococcaceae.unclassified
+Bacill.Bacillale.Thermoactinomycetaceae
+Bacill.Bacillale.Thermoactinomycetaceae.Planifilum
+Bacill.Bacillale.Thermoactinomycetaceae.Thermoactinomyces
+Bacill.Bacillale.Thermoactinomycetaceae.unclassified
+Bacill.Bacillale.unclassified
+Bacill.Bacillale.unclassified.AA
+Bacilli
+Bacilli.Lactobacillales.Aerococcaceae
+Bacilli.Lactobacillales.Aerococcaceae.Abiotrophia
+Bacilli.Lactobacillales.Aerococcaceae.Aerococcus
+Bacilli.Lactobacillales.Aerococcaceae.Eremococcus
+Bacilli.Lactobacillales.Aerococcaceae.unclassified
+Bacilli.Lactobacillales.Carnobacteriaceae.Alkalibacterium
+Bacilli.Lactobacillales.Carnobacteriaceae.Carnobacterium
+Bacilli.Lactobacillales.Carnobacteriaceae.Desemzia
+Bacilli.Lactobacillales.Carnobacteriaceae.Dolosigranulum
+Bacilli.Lactobacillales.Carnobacteriaceae
+Bacilli.Lactobacillales.Carnobacteriaceae.Granulicatella
+Bacilli.Lactobacillales.Carnobacteriaceae.Marinilactibacillus
+Bacilli.Lactobacillales.Carnobacteriaceae.Trichococcus
+Bacilli.Lactobacillales.Carnobacteriaceae.unclassified
+Clostridia
+Clostridia.Clostridiales
+Clostridia.Clostridiales.Clostridiaceae
+Clostridia.Clostridiales.Clostridiaceae.Alkaliphilus
+Clostridia.Clostridiales.Clostridiaceae.Clostridium
+Clostridia.Clostridiales.Clostridiaceae.Oxobacter
+Clostridia.Clostridiales.Clostridiaceae.Sarcina
+Clostridia.Clostridiales.Clostridiaceae.unclassified
+Clostridia.Clostridiales.Incertae_Sedis_XI
+Clostridia.Clostridiales.Incertae_Sedis_XI.Anaerococcus
+Clostridia.Clostridiales.Incertae_Sedis_XI.Finegoldia
+Clostridia.Clostridiales.Incertae_Sedis_XI.Gallicola
+Clostridia.Clostridiales.Incertae_Sedis_XI.Helcococcus
+Clostridia.Clostridiales.Incertae_Sedis_XIII
+Clostridia.Clostridiales.Incertae_Sedis_XIII.Anaerovorax
+Clostridia.Clostridiales.Incertae_Sedis_XIII.Mogibacterium
+Clostridia.Clostridiales.Incertae_Sedis_XIII.unclassified
+Clostridia.Clostridiales.Incertae_Sedis_XI.Parvimonas
+Clostridia.Clostridiales.Incertae_Sedis_XI.Peptoniphilus
+Clostridia.Clostridiales.Incertae_Sedis_XI.unclassified
+Clostridia.Clostridiales.Incertae_Sedis_XIV.Blautia
+Clostridi
+Clostridi.Clostridiales
+Clostridi.Clostridiales.Ruminococcaceae
+Clostridi.Clostridiales.Ruminococcaceae.Hydrogenoanaerobacterium
+Clostridi.Clostridiales.Ruminococcaceae.Oscillibacter
+Clostridi.Clostridiales.Ruminococcaceae.Papillibacter
+Clostridi.Clostridiales.Ruminococcaceae.Subdoligranulum
+Clostridi.Clostridiales.Ruminococcaceae.unclassified
+Clostridi.Clostridiale.Veillonellaceae.Acidaminococcus
+Clostridi.Clostridiale.Veillonellaceae.Anaeroglobus
+Clostridi.Clostridiale.Veillonellaceae.Dialister
+Clostridi.Clostridiale.Veillonellaceae
+Clostridi.Clostridiale.Veillonellaceae.Megamonas
+Clostridi.Clostridiale.Veillonellaceae.Megasphaera
+Clostridi.Clostridiale.Veillonellaceae.Mitsuokella
+Clostridi.Clostridiale.Veillonellaceae.Selenomonas
+Clostridi.Clostridiale.Veillonellaceae.Succiniclasticum
+Clostridi.Clostridiale.Veillonellaceae.unclassified
+Clostridi.Clostridiale.Veillonellaceae.Veillonella
+Clostridia.Thermoanaerobacterales
+Clostridia.Thermoanaerobacterales.Thermoanaerobacteraceae
+Clostridia.Thermoanaerobacterales.Thermoanaerobacteraceae.Thermoanaerobacterium
diff --git a/examples/metaref_fams/mr2.a.txt b/examples/metaref_fams/mr2.a.txt
new file mode 100644
index 0000000..210dcaa
--- /dev/null
+++ b/examples/metaref_fams/mr2.a.txt
@@ -0,0 +1,72 @@
+branch_color_from_ancestor 0
+title A maximal core gene for clade Y
+title_font_size 11
+annotation_background_offset -0.26
+annotation_background_separation 0.1
+branch_bracket_width 0.5
+branch_bracket_depth 0.75
+c1 clade_marker_color #FF0000
+c1 clade_marker_size 35
+c1 class_label Genomes containing gene X
+c11 clade_marker_color #00FFFF
+c11 clade_marker_size 35
+c11 class_label Genomes containing gene X
+c2 clade_marker_color #009900
+c2 clade_marker_size 35
+c3 clade_marker_color #009900
+c3 clade_marker_size 35
+#class2 annotation_background_color #0000FF
+#class2 class_label Clades in which X is a core gene
+clade_marker_size 10
+branch_thickness 0.5
+Bacill.Bacillale class c3
+Bacill.Bacillale.Staphylococcaceae.Gemella class c1
+Bacill.Bacillale.Staphylococcaceae class c1
+Bacill.Bacillale.Staphylococcaceae.Jeotgalicoccus class c1
+Bacill.Bacillale.Staphylococcaceae.Macrococcus class c1
+Bacill.Bacillale.Staphylococcaceae.Staphylococcus class c1
+Bacill.Bacillale.Staphylococcaceae.unclassified class c1
+Bacill.Bacillale.Staphylococcaceae.Macrococcus class c1
+Bacill.Bacillale.unclassified.AA class c1
+Bacill.Bacillale.unclassified class c1
+Bacill.Bacillale.Thermoactinomycetaceae.Planifilum class c1
+Bacill.Bacillale.Thermoactinomycetaceae.Thermoactinomyces class c1
+Bacill.Bacillale.Thermoactinomycetaceae.unclassified class c1
+Bacill.Bacillale.Thermoactinomycetaceae class c1
+Bacill.Bacillale annotation Y
+Bacill.Bacillale.Staphylococcaceae annotation Y1
+Bacill.Bacillale.Thermoactinomycetaceae annotation Y2
+Bacill.Bacillale.unclassified annotation Y3
+
+Bacill.Bacillale.Staphylococcaceae.Gemella ring_shape 1 v
+Bacill.Bacillale.Staphylococcaceae.Jeotgalicoccus ring_shape 1 v
+Bacill.Bacillale.Staphylococcaceae.Macrococcus ring_shape 1 v
+Bacill.Bacillale.Staphylococcaceae.Staphylococcus ring_shape 1 v
+Bacill.Bacillale.Staphylococcaceae.unclassified ring_shape 1 v
+Bacill.Bacillale.Staphylococcaceae.Macrococcus ring_shape 1 v
+Bacill.Bacillale.unclassified.AA ring_shape 1 v
+Bacill.Bacillale.Thermoactinomycetaceae.Planifilum ring_shape 1 v
+Bacill.Bacillale.Thermoactinomycetaceae.Thermoactinomyces ring_shape 1 v
+Bacill.Bacillale.Thermoactinomycetaceae.unclassified ring_shape 1 v
+
+Bacill.Bacillale.Staphylococcaceae.Gemella ring_width 1 0.6
+Bacill.Bacillale.Staphylococcaceae.Jeotgalicoccus ring_width 1 0.6
+Bacill.Bacillale.Staphylococcaceae.Macrococcus ring_width 1 0.6
+Bacill.Bacillale.Staphylococcaceae.Staphylococcus ring_width 1 0.6
+Bacill.Bacillale.Staphylococcaceae.unclassified ring_width 1 0.6
+Bacill.Bacillale.Staphylococcaceae.Macrococcus ring_width 1 0.6
+Bacill.Bacillale.unclassified.AA ring_width 1 0.6
+Bacill.Bacillale.Thermoactinomycetaceae.Planifilum ring_width 1 0.6
+Bacill.Bacillale.Thermoactinomycetaceae.Thermoactinomyces ring_width 1 0.6
+Bacill.Bacillale.Thermoactinomycetaceae.unclassified ring_width 1 0.6
+
+Bacill.Bacillale.Staphylococcaceae.Gemella ring_height 1 0.6
+Bacill.Bacillale.Staphylococcaceae.Jeotgalicoccus ring_height 1 0.6
+Bacill.Bacillale.Staphylococcaceae.Macrococcus ring_height 1 0.6
+Bacill.Bacillale.Staphylococcaceae.Staphylococcus ring_height 1 0.6
+Bacill.Bacillale.Staphylococcaceae.unclassified ring_height 1 0.6
+Bacill.Bacillale.Staphylococcaceae.Macrococcus ring_height 1 0.6
+Bacill.Bacillale.unclassified.AA ring_height 1 0.6
+Bacill.Bacillale.Thermoactinomycetaceae.Planifilum ring_height 1 0.6
+Bacill.Bacillale.Thermoactinomycetaceae.Thermoactinomyces ring_height 1 0.6
+Bacill.Bacillale.Thermoactinomycetaceae.unclassified ring_height 1 0.6
diff --git a/examples/metaref_fams/run.sh b/examples/metaref_fams/run.sh
new file mode 100755
index 0000000..8511b12
--- /dev/null
+++ b/examples/metaref_fams/run.sh
@@ -0,0 +1,8 @@
+#!/bin/sh
+graphlan_annotate.py mr1.txt mr1.xml --annot mr1.a.txt
+graphlan.py mr1.xml mr1.png --dpi 150 --size 4 --pad 0.2
+graphlan.py mr1.xml mr1.svg --dpi 150 --size 4 --pad 0.2
+
+graphlan_annotate.py mr1.txt mr2.xml --annot mr2.a.txt
+graphlan.py mr2.xml mr2.png --dpi 150 --size 4 --pad 0.2
+graphlan.py mr2.xml mr2.svg --dpi 150 --size 4 --pad 0.2
diff --git a/examples/phylo_small/annot.txt b/examples/phylo_small/annot.txt
new file mode 100644
index 0000000..2c6c087
--- /dev/null
+++ b/examples/phylo_small/annot.txt
@@ -0,0 +1,948 @@
+#title Human Microbiome Project species tree
+#title_font_size 33
+annotation_background_alpha 0.1
+total_plotted_degrees 300
+start_rotation 270
+branch_bracket_width 0.0
+class_legend_font_size 24
+annotation_legend_font_size 24
+annotation_background_separation -0.03
+annotation_background_offset 0.0
+annotation_background_width 0.07
+branch_thickness 2.5
+ring_label_font_size 1 13
+ring_label_font_size 2 13
+ring_label_font_size 3 13
+ring_label_font_size 4 13
+ring_label_font_size 5 13
+ring_label_font_size 6 13
+ring_label_font_size 7 13
+ring_label_font_size 8 13
+clade_marker_size 20
+clade_marker_edge_width 0.8
+ring_internal_separator_thickness 1 0.5
+ring_separator_color 1 #888888
+ring_label 1 Stool (prevalence)
+ring_label_color 1 #0000FF
+ring_internal_separator_thickness 2 0.5
+ring_separator_color 2 #888888
+ring_label 2 Cheek (prevalence)
+ring_label_color 2 #FFA500
+ring_internal_separator_thickness 3 0.5
+ring_separator_color 3 #888888
+ring_label 3 Plaque (prevalence)
+ring_label_color 3 #FF0000
+ring_internal_separator_thickness 4 0.5
+ring_separator_color 4 #888888
+ring_label 4 Tongue (prevalence)
+ring_label_color 4 #800000
+ring_internal_separator_thickness 5 0.5
+ring_separator_color 5 #888888
+ring_label 5 Nose (prevalence)
+ring_label_color 5 #006400
+ring_internal_separator_thickness 6 0.5
+ring_separator_color 6 #888888
+ring_label 6 Vagina (prevalence)
+ring_label_color 6 #800080
+ring_internal_separator_thickness 7 0.5
+ring_separator_color 7 #888888
+ring_label 7 Skin (prevalence)
+ring_label_color 7 #696969
+ring_internal_separator_thickness 8 0.5
+ring_separator_color 8 #888888
+ring_label 8 Abundance when present
+ring_label_color 8 #696969
+Bacteroides annotation Bacteroides
+Bacteroides annotation_background_color k
+Bacteroides annotation_font_size 14
+Prevotella annotation Prevotella
+Prevotella annotation_background_color k
+Prevotella annotation_font_size 14
+t649989989 ring_color 8 #800000
+t649989989 ring_height 8 0.221198344
+t649989989 ring_width 8 0.7
+t649989988 ring_color 8 #FF0000
+t649989988 ring_height 8 0.035
+t649989988 ring_width 8 0.7
+t643886200 ring_color 8 #0000FF
+t643886200 ring_height 8 3.20445565
+t643886200 ring_width 8 0.7
+t647000295 ring_color 8 #800080
+t647000295 ring_height 8 0.07
+t647000295 ring_width 8 0.7
+t648276716 ring_color 8 #FF0000
+t648276716 ring_height 8 0.07
+t648276716 ring_width 8 0.7
+t645951840 ring_color 8 #FF0000
+t645951840 ring_height 8 0.0802612
+t645951840 ring_width 8 0.7
+t648276713 ring_color 8 #800000
+t648276713 ring_height 8 0.07
+t648276713 ring_width 8 0.7
+t649989986 ring_color 8 #FF0000
+t649989986 ring_height 8 0.07
+t649989986 ring_width 8 0.7
+t645951836 ring_color 8 #800000
+t645951836 ring_height 8 0.12
+t645951836 ring_width 8 0.7
+t648861012 ring_color 8 #FF0000
+t648861012 ring_height 8 0.16
+t648861012 ring_width 8 0.7
+t645951825 ring_color 8 #0000FF
+t645951825 ring_height 8 0.07
+t645951825 ring_width 8 0.7
+t647000292 ring_color 8 #0000FF
+t647000292 ring_height 8 0.07
+t647000292 ring_width 8 0.7
+t647000293 ring_color 8 #006400
+t647000293 ring_height 8 0.07
+t647000293 ring_width 8 0.7
+t648028051 ring_color 8 #800000
+t648028051 ring_height 8 1.506632
+t648028051 ring_width 8 0.7
+t648276715 ring_color 8 #800080
+t648276715 ring_height 8 0.07
+t648276715 ring_width 8 0.7
+t649989987 ring_color 8 #FF0000
+t649989987 ring_height 8 0.07
+t649989987 ring_width 8 0.7
+t648861012 clade_marker_color #87CEFA
+t649989988 clade_marker_color #87CEFA
+t649989989 clade_marker_color #87CEFA
+t649989986 clade_marker_color #87CEFA
+t649989987 clade_marker_color #87CEFA
+t647000292 clade_marker_color #87CEFA
+t647000293 clade_marker_color #87CEFA
+t647000295 clade_marker_color #87CEFA
+t645951825 clade_marker_color #87CEFA
+t648028051 clade_marker_color #87CEFA
+t645951836 clade_marker_color #87CEFA
+t648276713 clade_marker_color #87CEFA
+t648276716 clade_marker_color #87CEFA
+t648276715 clade_marker_color #87CEFA
+t645951840 clade_marker_color #87CEFA
+t643886200 clade_marker_color #87CEFA
+t649989989 clade_marker_size 300.0
+t649989988 clade_marker_size 100.0
+t643886200 clade_marker_size 60.268292683
+t647000295 clade_marker_size 68.9999999999
+t648276716 clade_marker_size 120.8695652174
+t645951840 clade_marker_size 245.857142857
+t648276713 clade_marker_size 68.2857142857
+t649989986 clade_marker_size 72.9565217391
+t645951836 clade_marker_size 290.714285714
+t648861012 clade_marker_size 290.714285714
+t645951825 clade_marker_size 40.0
+t647000292 clade_marker_size 68.2857142857
+t647000293 clade_marker_size 60.268292683
+t648028051 clade_marker_size 300.0
+t648276715 clade_marker_size 289.571428571
+t649989987 clade_marker_size 278.142857143
+t649989989 ring_color 1 #0000FF
+t649989989 ring_height 1 1.01
+t649989989 ring_alpha 1 0.0
+t649989989 ring_color 2 #FFA500
+t649989989 ring_height 2 1.01
+t649989989 ring_alpha 2 1.0
+t649989989 ring_color 3 #FF0000
+t649989989 ring_height 3 1.01
+t649989989 ring_alpha 3 1.0
+t649989989 ring_color 4 #800000
+t649989989 ring_height 4 1.01
+t649989989 ring_alpha 4 1.0
+t649989989 ring_color 5 #006400
+t649989989 ring_height 5 1.01
+t649989989 ring_alpha 5 0.0
+t649989989 ring_color 6 #800080
+t649989989 ring_height 6 1.01
+t649989989 ring_alpha 6 0.0
+t649989989 ring_color 7 #696969
+t649989989 ring_height 7 1.01
+t649989989 ring_alpha 7 1.0
+t649989988 ring_color 1 #0000FF
+t649989988 ring_height 1 1.01
+t649989988 ring_alpha 1 1.0
+t649989988 ring_color 2 #FFA500
+t649989988 ring_height 2 1.01
+t649989988 ring_alpha 2 1.0
+t649989988 ring_color 3 #FF0000
+t649989988 ring_height 3 1.01
+t649989988 ring_alpha 3 1.0
+t649989988 ring_color 4 #800000
+t649989988 ring_height 4 1.01
+t649989988 ring_alpha 4 1.0
+t649989988 ring_color 5 #006400
+t649989988 ring_height 5 1.01
+t649989988 ring_alpha 5 0.0
+t649989988 ring_color 6 #800080
+t649989988 ring_height 6 1.01
+t649989988 ring_alpha 6 0.0
+t649989988 ring_color 7 #696969
+t649989988 ring_height 7 1.01
+t649989988 ring_alpha 7 0.0
+t643886200 ring_color 1 #0000FF
+t643886200 ring_height 1 1.01
+t643886200 ring_alpha 1 1.0
+t643886200 ring_color 2 #FFA500
+t643886200 ring_height 2 1.01
+t643886200 ring_alpha 2 1.0
+t643886200 ring_color 3 #FF0000
+t643886200 ring_height 3 1.01
+t643886200 ring_alpha 3 1.0
+t643886200 ring_color 4 #800000
+t643886200 ring_height 4 1.01
+t643886200 ring_alpha 4 1.0
+t643886200 ring_color 5 #006400
+t643886200 ring_height 5 1.01
+t643886200 ring_alpha 5 1.0
+t643886200 ring_color 6 #800080
+t643886200 ring_height 6 1.01
+t643886200 ring_alpha 6 1.0
+t643886200 ring_color 7 #696969
+t643886200 ring_height 7 1.01
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+t647000295 ring_color 1 #0000FF
+t647000295 ring_height 1 1.01
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+t647000295 ring_alpha 2 0.0
+t647000295 ring_color 3 #FF0000
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+t647000295 ring_alpha 3 0.0
+t647000295 ring_color 4 #800000
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+t648276716 ring_height 5 1.01
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+t648276716 ring_height 6 1.01
+t648276716 ring_alpha 6 0.0
+t648276716 ring_color 7 #696969
+t648276716 ring_height 7 1.01
+t648276716 ring_alpha 7 0.0
+t645951840 ring_color 1 #0000FF
+t645951840 ring_height 1 1.01
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diff --git a/examples/phylo_small/phylo_small.xml b/examples/phylo_small/phylo_small.xml
new file mode 100644
index 0000000..ad30c84
--- /dev/null
+++ b/examples/phylo_small/phylo_small.xml
@@ -0,0 +1,274 @@
+<phy:phyloxml xmlns:phy="http://www.phyloxml.org">
+ <phy:phylogeny rooted="false">
+ <phy:clade>
+
+
+ <phy:clade>
+ <phy:name>Prevotella</phy:name>
+ <phy:branch_length>0.24393</phy:branch_length>
+ <phy:confidence type="unknown">1.0</phy:confidence>
+ <phy:clade>
+ <phy:name>t645951840</phy:name>
+ <phy:branch_length>0.63372</phy:branch_length>
+ </phy:clade>
+ <phy:clade>
+ <phy:branch_length>0.26393</phy:branch_length>
+ <phy:confidence type="unknown">1.0</phy:confidence>
+ <phy:clade>
+ <phy:name>t648276716</phy:name>
+ <phy:branch_length>0.30892</phy:branch_length>
+ </phy:clade>
+ <phy:clade>
+ <phy:branch_length>0.08817</phy:branch_length>
+ <phy:confidence type="unknown">1.0</phy:confidence>
+ <phy:clade>
+ <phy:branch_length>0.06497</phy:branch_length>
+ <phy:confidence type="unknown">1.0</phy:confidence>
+ <phy:clade>
+ <phy:branch_length>0.05732</phy:branch_length>
+ <phy:confidence type="unknown">0.98</phy:confidence>
+ <phy:clade>
+ <phy:name>t649989986</phy:name>
+ <phy:branch_length>0.19496</phy:branch_length>
+ </phy:clade>
+ <phy:clade>
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+ </phy:clade>
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+ <phy:confidence type="unknown">0.16</phy:confidence>
+ <phy:clade>
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+ <phy:confidence type="unknown">1.0</phy:confidence>
+ <phy:clade>
+ <phy:name>t648861012</phy:name>
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+ </phy:clade>
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+ </phy:clade>
+ </phy:clade>
+ <phy:clade>
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+ <phy:confidence type="unknown">0.99</phy:confidence>
+ <phy:clade>
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+ </phy:clade>
+ <phy:clade>
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+ <phy:confidence type="unknown">1.0</phy:confidence>
+ <phy:clade>
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+ <phy:confidence type="unknown">1.0</phy:confidence>
+ <phy:clade>
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+ <phy:confidence type="unknown">0.71</phy:confidence>
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+ </phy:clade>
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+ <phy:confidence type="unknown">0.99</phy:confidence>
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+ </phy:clade>
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+ <phy:confidence type="unknown">1.0</phy:confidence>
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+ </phy:clade>
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+ </phy:clade>
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+ </phy:clade>
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+ </phy:clade>
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+ </phy:clade>
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+ <phy:confidence type="unknown">1.0</phy:confidence>
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+ </phy:clade>
+ <phy:clade>
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+ <phy:confidence type="unknown">0.94</phy:confidence>
+ <phy:clade>
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+ </phy:clade>
+ <phy:clade>
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+ <phy:confidence type="unknown">0.2</phy:confidence>
+ <phy:clade>
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+ <phy:branch_length>0.16743</phy:branch_length>
+ </phy:clade>
+ <phy:clade>
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+ <phy:branch_length>0.09293</phy:branch_length>
+ </phy:clade>
+ </phy:clade>
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+ </phy:clade>
+ </phy:clade>
+ </phy:clade>
+ </phy:phylogeny>
+</phy:phyloxml>
diff --git a/examples/phylo_small/run.sh b/examples/phylo_small/run.sh
new file mode 100755
index 0000000..8598f81
--- /dev/null
+++ b/examples/phylo_small/run.sh
@@ -0,0 +1,3 @@
+#!/bin/sh
+graphlan_annotate.py phylo_small.xml phylo_small.annot.xml --annot annot.txt
+graphlan.py phylo_small.annot.xml phylo_small.png --dpi 150
diff --git a/examples/readme.txt b/examples/readme.txt
new file mode 100644
index 0000000..d04679f
--- /dev/null
+++ b/examples/readme.txt
@@ -0,0 +1,6 @@
+GraPhlAn examples are provided in subfolders. Each subfoder has a run.sh script
+that annotate the input tree with the annotation file and then generate the
+output image.
+
+The scripts assume that the GraPhlAn main folder is in the system path.
+
diff --git a/examples/saliva_microbiome/PIPELINE.sh b/examples/saliva_microbiome/PIPELINE.sh
new file mode 100755
index 0000000..440af95
--- /dev/null
+++ b/examples/saliva_microbiome/PIPELINE.sh
@@ -0,0 +1,14 @@
+# !/bin/bash
+
+# remove the generated files, if any
+echo "Removing files"
+rm -f annot.txt tree.txt outtree.txt outimg.png
+
+# convert it!
+echo "Converting to GraPhlAn"
+export2graphlan.py -i otu_table.biom -a annot.txt -t tree.txt --discard_otus --most_abundant 40 --annotations 2,3,4,5 \
+--external_annotations 6,7 --title "Saliva microbiome" --internal_levels --def_na 0 --max_clade_size 350
+
+echo "Running Graphlan"
+graphlan_annotate.py --annot annot.txt tree.txt outtree.txt # attach annotation to the tree
+graphlan.py --dpi 300 --size 7.0 outtree.txt outimg.png # generate the beautiful image
diff --git a/examples/saliva_microbiome/otu_table.biom b/examples/saliva_microbiome/otu_table.biom
new file mode 100644
index 0000000..6e61dfd
--- /dev/null
+++ b/examples/saliva_microbiome/otu_table.biom
@@ -0,0 +1 @@
+{"id": "None","format": "Biological Observation Matrix 1.0.0","format_url": "http://biom-format.org","type": "OTU table","generated_by": "QIIME 1.7.0","date": "2013-11-28T11:26:52.515873","matrix_type": "sparse","matrix_element_type": "int","shape": [4705, 14],"data": [[0,0,75],[0,1,8],[0,2,5],[0,3,3],[0,4,1],[0,5,1],[0,6,1],[0,7,2],[1,4,1],[1,5,1],[2,0,5],[2,1,2],[2,4,5],[2,5,3],[2,6,1],[2,7,3],[2,8,16],[2,9,2],[3,8,1],[3,10,1],[3,11,1],[4,10,1],[5,5,1],[5,7,1],[5,10,3],[5,11,4],[6,4,1] [...]
\ No newline at end of file
diff --git a/examples/simple/annot.txt b/examples/simple/annot.txt
new file mode 100644
index 0000000..3e11dff
--- /dev/null
+++ b/examples/simple/annot.txt
@@ -0,0 +1,58 @@
+branch_bracket_width 0.5
+branch_bracket_depth 0.75
+class1 clade_marker_color #FF0000
+class1 clade_marker_size 35
+class1 class_label Genomes containing gene X
+class2 clade_marker_color #0000FF
+class2 clade_marker_size 35
+class2 annotation_background_color #0000FF
+class2 class_label Clades in which X is a core gene
+clade_marker_size 10
+branch_thickness 0.5
+Bacill.Bacillale class class1
+Bacill.Bacillale.Staphylococcaceae.Gemella class class1
+Bacill.Bacillale.Staphylococcaceae.Jeotgalicoccus class class1
+Bacill.Bacillale.Staphylococcaceae.Macrococcus class class1
+Bacill.Bacillale.Staphylococcaceae.Nosocomiicoccus class class1
+Bacill.Bacillale.Staphylococcaceae.Salinicoccus class class1
+Bacill.Bacillale.Staphylococcaceae.Staphylococcus class class1
+Bacill.Bacillale.Staphylococcaceae.unclassified class class1
+Bacill.Bacillale.Staphylococcaceae.Macrococcus class class1
+Bacill.Bacillale.unclassified class class1
+Bacill.Bacillale.Thermoactinomycetaceae.Planifilum class class1
+Bacill.Bacillale.Thermoactinomycetaceae.Thermoactinomyces class class1
+Bacill.Bacillale.Thermoactinomycetaceae.unclassified class class1
+Bacilli.Lactobacillales.Aerococcaceae.Eremococcus class class1
+Bacilli.Lactobacillales.Aerococcaceae.Facklamia class class1
+Bacilli.Lactobacillales.Carnobacteriaceae.Alloiococcus class class1
+Bacilli.Lactobacillales.Carnobacteriaceae.Carnobacterium class class1
+Bacilli.Lactobacillales.Carnobacteriaceae.Desemzia class class1
+Bacilli.Lactobacillales.Lactobacillaceae.Lactobacillus class class1
+Bacilli.Lactobacillales.Lactobacillaceae.Pediococcus class class1
+Clostrid.Clostridiales.Lachnospiraceae.Dorea class class1
+Clostridia.Clostridiales.Incertae_Sedis_XI.Finegoldia class class1
+Clostridia.Clostridiales.Incertae_Sedis_XI.Gallicola class class1
+Clostridia.Clostridiales.Incertae_Sedis_XI.Helcococcus class class1
+Clostridia.Clostridiales.Incertae_Sedis_XI.Peptoniphilus class class1
+Clostridia.Clostridiales.Incertae_Sedis_XVIII.Symbiobacterium class class1
+Clostrid.Clostridiales.Lachnospiraceae.Butyrivibrio class class1
+Clostrid.Clostridiales.Lachnospiraceae.Coprococcus class class1
+Clostrid.Clostridiales.Lachnospiraceae.Oribacterium class class1
+Clostrid.Clostridiales.Lachnospiraceae.Parasporobacterium class class1
+Bacilli.Lactobacillales.Aerococcaceae.Globicatella class class1
+Clostridi.Clostridiales.Ruminococcaceae.Butyricicoccus class class1
+Clostridi.Clostridiales.Ruminococcaceae.Papillibacter class class1
+Clostridi.Clostridiale.Veillonellaceae.Selenomonas class class1
+Clostrid.Clostridiales.Peptostreptococcaceae.Filifactor class class1
+Clostridi.Clostridiale.Veillonellaceae.Sporomusa class class1
+Clostridia.Thermoanaerobacterales.Thermoanaerobacteraceae.Thermoanaerobacterium class class1
+Clostrid.Clostridiales.Peptostreptococcaceae.Sporacetigenium class class1
+Clostrid.Clostridiales.Lachnospiraceae.Roseburia class class1
+Clostrid.Clostridiales.Lachnospiraceae.Shuttleworthia class class1
+Bacill.Bacillale.Staphylococcaceae class class2
+Bacill.Bacillale.Thermoactinomycetaceae class class2
+Bacill.Bacillale class class2
+#Bacill.Bacillale annotation_background_color #0000FF
+Bacill.Bacillale annotation Y: X is a clade-specific core gene for clade X
+Bacill.Bacillale.Staphylococcaceae annotation Z: X is a core gene in clade Z
+Bacill.Bacillale.Thermoactinomycetaceae annotation K: X is a core gene in clade X
diff --git a/examples/simple/core_genes.txt b/examples/simple/core_genes.txt
new file mode 100644
index 0000000..1659952
--- /dev/null
+++ b/examples/simple/core_genes.txt
@@ -0,0 +1,192 @@
+Bacilli.Bacillales.Bacillaceae
+Bacilli.Bacillales.Bacillaceae.Anoxybacillus
+Bacilli.Bacillales.Bacillaceae.Bacillus
+Bacilli.Bacillales.Bacillaceae.Exiguobacterium
+Bacilli.Bacillales.Bacillaceae.Geobacillus
+Bacilli.Bacillales.Bacillaceae.Lysinibacillus
+Bacilli.Bacillales.Bacillaceae.Oceanobacillus
+Bacilli.Bacillales.Bacillaceae.Tumebacillus
+Bacilli.Bacillales.Bacillaceae.unclassified
+Bacilli.Bacillales.Bacillaceae.Ureibacillus
+Bacilli.Bacillales.Bacillales_incertae_sedis
+Bacilli.Bacillales.Bacillales_incertae_sedis.Rummeliibacillus
+Bacilli.Bacillales
+Bacill
+Bacill.Bacillales
+Bacill.Bacillales.Listeriaceae
+Bacill.Bacillales.Listeriaceae.Brochothrix
+Bacill.Bacillales.Listeriaceae.Listeria
+Bacill.Bacillales.Paenibacillaceae
+Bacill.Bacillales.Paenibacillaceae.Ammoniphilus
+Bacill.Bacillales.Paenibacillaceae.Brevibacillus
+Bacill.Bacillales.Paenibacillaceae.Cohnella
+Bacill.Bacillales.Paenibacillaceae.Paenibacillus
+Bacill.Bacillales.Paenibacillaceae.Thermicanus
+Bacill.Bacillales.Paenibacillaceae.Thermobacillus
+Bacill.Bacillales.Paenibacillaceae.unclassified
+Bacill.Bacillales.Planococcaceae
+Bacill.Bacillales.Planococcaceae.Kurthia
+Bacill.Bacillales.Planococcaceae.Planococcus
+Bacill.Bacillales.Planococcaceae.Planomicrobium
+Bacill.Bacillales.Planococcaceae.Sporosarcina
+Bacill.Bacillales.Planococcaceae.unclassified
+Bacill.Bacillales.Sporolactobacillaceae
+Bacill.Bacillales.Sporolactobacillaceae.Marinococcus
+Bacill.Bacillale
+Bacill.Bacillale.Staphylococcaceae
+Bacill.Bacillale.Staphylococcaceae.Gemella
+Bacill.Bacillale.Staphylococcaceae.Jeotgalicoccus
+Bacill.Bacillale.Staphylococcaceae.Macrococcus
+Bacill.Bacillale.Staphylococcaceae.Nosocomiicoccus
+Bacill.Bacillale.Staphylococcaceae.Salinicoccus
+Bacill.Bacillale.Staphylococcaceae.Staphylococcus
+Bacill.Bacillale.Staphylococcaceae.unclassified
+Bacill.Bacillale.Thermoactinomycetaceae
+Bacill.Bacillale.Thermoactinomycetaceae.Planifilum
+Bacill.Bacillale.Thermoactinomycetaceae.Thermoactinomyces
+Bacill.Bacillale.Thermoactinomycetaceae.unclassified
+Bacill.Bacillale.unclassified
+Bacilli
+Bacilli.Lactobacillales.Aerococcaceae
+Bacilli.Lactobacillales.Aerococcaceae.Abiotrophia
+Bacilli.Lactobacillales.Aerococcaceae.Aerococcus
+Bacilli.Lactobacillales.Aerococcaceae.Eremococcus
+Bacilli.Lactobacillales.Aerococcaceae.Facklamia
+Bacilli.Lactobacillales.Aerococcaceae.Globicatella
+Bacilli.Lactobacillales.Aerococcaceae.unclassified
+Bacilli.Lactobacillales.Carnobacteriaceae.Alkalibacterium
+Bacilli.Lactobacillales.Carnobacteriaceae.Alloiococcus
+Bacilli.Lactobacillales.Carnobacteriaceae.Atopostipes
+Bacilli.Lactobacillales.Carnobacteriaceae.Carnobacterium
+Bacilli.Lactobacillales.Carnobacteriaceae.Desemzia
+Bacilli.Lactobacillales.Carnobacteriaceae.Dolosigranulum
+Bacilli.Lactobacillales.Carnobacteriaceae
+Bacilli.Lactobacillales.Carnobacteriaceae.Granulicatella
+Bacilli.Lactobacillales.Carnobacteriaceae.Marinilactibacillus
+Bacilli.Lactobacillales.Carnobacteriaceae.Trichococcus
+Bacilli.Lactobacillales.Carnobacteriaceae.unclassified
+Bacilli.Lactobacillales.Enterococcaceae
+Bacilli.Lactobacillales.Enterococcaceae.Catellicoccus
+Bacilli.Lactobacillales.Enterococcaceae.Enterococcus
+Bacilli.Lactobacillales.Enterococcaceae.Tetragenococcus
+Bacilli.Lactobacillales.Enterococcaceae.unclassified
+Bacilli.Lactobacillales.Enterococcaceae.Vagococcus
+Bacilli.Lactobacillales
+Bacilli.Lactobacillales.Lactobacillaceae
+Bacilli.Lactobacillales.Lactobacillaceae.Lactobacillus
+Bacilli.Lactobacillales.Lactobacillaceae.Pediococcus
+Bacilli.Lactobacillales.Lactobacillaceae.unclassified
+Bacilli.Lactobacillales.Leuconostocaceae
+Bacilli.Lactobacillales.Leuconostocaceae.Leuconostoc
+Bacilli.Lactobacillales.Leuconostocaceae.Weissella
+Bacilli.Lactobacillales.Streptococcaceae
+Bacilli.Lactobacillales.Streptococcaceae.Lactococcus
+Bacilli.Lactobacillales.Streptococcaceae.Lactovum
+Bacilli.Lactobacillales.Streptococcaceae.Streptococcus
+Bacilli.Lactobacillales.Streptococcaceae.unclassified
+Clostridia
+Clostridia.Clostridiales
+Clostridia.Clostridiales.Clostridiaceae
+Clostridia.Clostridiales.Clostridiaceae.Alkaliphilus
+Clostridia.Clostridiales.Clostridiaceae.Anaerobacter
+Clostridia.Clostridiales.Clostridiaceae.Clostridium
+Clostridia.Clostridiales.Clostridiaceae.Oxobacter
+Clostridia.Clostridiales.Clostridiaceae.Sarcina
+Clostridia.Clostridiales.Clostridiaceae.unclassified
+Clostridia.Clostridiales.Eubacteriaceae
+Clostridia.Clostridiales.Eubacteriaceae.Anaerofustis
+Clostridia.Clostridiales.Eubacteriaceae.Eubacterium
+Clostridia.Clostridiales.Eubacteriaceae.Garciella
+Clostridia.Clostridiales.Eubacteriaceae.Pseudoramibacter
+Clostridia.Clostridiales.Gracilibacteraceae
+Clostridia.Clostridiales.Gracilibacteraceae.unclassified
+Clostridia.Clostridiales.Incertae_Sedis_XI
+Clostridia.Clostridiales.Incertae_Sedis_XI.Anaerococcus
+Clostridia.Clostridiales.Incertae_Sedis_XI.Finegoldia
+Clostridia.Clostridiales.Incertae_Sedis_XI.Gallicola
+Clostridia.Clostridiales.Incertae_Sedis_XI.Helcococcus
+Clostridia.Clostridiales.Incertae_Sedis_XIII
+Clostridia.Clostridiales.Incertae_Sedis_XIII.Anaerovorax
+Clostridia.Clostridiales.Incertae_Sedis_XIII.Mogibacterium
+Clostridia.Clostridiales.Incertae_Sedis_XIII.unclassified
+Clostridia.Clostridiales.Incertae_Sedis_XI.Parvimonas
+Clostridia.Clostridiales.Incertae_Sedis_XI.Peptoniphilus
+Clostridia.Clostridiales.Incertae_Sedis_XI.Sporanaerobacter
+Clostridia.Clostridiales.Incertae_Sedis_XI.Tissierella
+Clostridia.Clostridiales.Incertae_Sedis_XI.unclassified
+Clostridia.Clostridiales.Incertae_Sedis_XIV.Blautia
+Clostridia.Clostridiales.Incertae_Sedis_XIV
+Clostridia.Clostridiales.Incertae_Sedis_XIV.Howardella
+Clostridia.Clostridiales.Incertae_Sedis_XIV.Proteocatella
+Clostridia.Clostridiales.Incertae_Sedis_XVIII
+Clostridia.Clostridiales.Incertae_Sedis_XVIII.Symbiobacterium
+Clostrid
+Clostrid.Clostridiales
+Clostrid.Clostridiales.Lachnospiraceae
+Clostrid.Clostridiales.Lachnospiraceae.Acetitomaculum
+Clostrid.Clostridiales.Lachnospiraceae.Anaerosporobacter
+Clostrid.Clostridiales.Lachnospiraceae.Anaerostipes
+Clostrid.Clostridiales.Lachnospiraceae.Butyrivibrio
+Clostrid.Clostridiales.Lachnospiraceae.Catonella
+Clostrid.Clostridiales.Lachnospiraceae.Coprococcus
+Clostrid.Clostridiales.Lachnospiraceae.Dorea
+Clostrid.Clostridiales.Lachnospiraceae.Hespellia
+Clostrid.Clostridiales.Lachnospiraceae.Johnsonella
+Clostrid.Clostridiales.Lachnospiraceae.Lachnobacterium
+Clostrid.Clostridiales.Lachnospiraceae.Moryella
+Clostrid.Clostridiales.Lachnospiraceae.Oribacterium
+Clostrid.Clostridiales.Lachnospiraceae.Parasporobacterium
+Clostrid.Clostridiales.Lachnospiraceae.Pseudobutyrivibrio
+Clostrid.Clostridiales.Lachnospiraceae.Robinsoniella
+Clostrid.Clostridiales.Lachnospiraceae.Roseburia
+Clostrid.Clostridiales.Lachnospiraceae.Shuttleworthia
+Clostrid.Clostridiales.Lachnospiraceae.Syntrophococcus
+Clostrid.Clostridiales.Lachnospiraceae.unclassified
+Clostrid.Clostridiales.Peptococcaceae
+Clostrid.Clostridiales.Peptococcaceae.Dehalobacter
+Clostrid.Clostridiales.Peptococcaceae.Desulfonispora
+Clostrid.Clostridiales.Peptococcaceae.Peptococcus
+Clostrid.Clostridiales.Peptococcaceae.unclassified
+Clostrid.Clostridiales.Peptostreptococcaceae
+Clostrid.Clostridiales.Peptostreptococcaceae.Filifactor
+Clostrid.Clostridiales.Peptostreptococcaceae.Peptostreptococcus
+Clostrid.Clostridiales.Peptostreptococcaceae.Sporacetigenium
+Clostrid.Clostridiales.Peptostreptococcaceae.unclassified
+Clostridi
+Clostridi.Clostridiales
+Clostridi.Clostridiales.Ruminococcaceae.Acetanaerobacterium
+Clostridi.Clostridiales.Ruminococcaceae.Acetivibrio
+Clostridi.Clostridiales.Ruminococcaceae.Anaerofilum
+Clostridi.Clostridiales.Ruminococcaceae.Anaerotruncus
+Clostridi.Clostridiales.Ruminococcaceae.Butyricicoccus
+Clostridi.Clostridiales.Ruminococcaceae.Ethanoligenens
+Clostridi.Clostridiales.Ruminococcaceae.Faecalibacterium
+Clostridi.Clostridiales.Ruminococcaceae.Fastidiosipila
+Clostridi.Clostridiales.Ruminococcaceae
+Clostridi.Clostridiales.Ruminococcaceae.Hydrogenoanaerobacterium
+Clostridi.Clostridiales.Ruminococcaceae.Oscillibacter
+Clostridi.Clostridiales.Ruminococcaceae.Papillibacter
+Clostridi.Clostridiales.Ruminococcaceae.Ruminococcus
+Clostridi.Clostridiales.Ruminococcaceae.Sporobacter
+Clostridi.Clostridiales.Ruminococcaceae.Subdoligranulum
+Clostridi.Clostridiales.Ruminococcaceae.unclassified
+Clostridi.Clostridiale.unclassified
+Clostridi.Clostridiale.Veillonellaceae.Acidaminococcus
+Clostridi.Clostridiale.Veillonellaceae.Allisonella
+Clostridi.Clostridiale.Veillonellaceae.Anaeroglobus
+Clostridi.Clostridiale.Veillonellaceae.Centipeda
+Clostridi.Clostridiale.Veillonellaceae.Dialister
+Clostridi.Clostridiale.Veillonellaceae
+Clostridi.Clostridiale.Veillonellaceae.Megamonas
+Clostridi.Clostridiale.Veillonellaceae.Megasphaera
+Clostridi.Clostridiale.Veillonellaceae.Mitsuokella
+Clostridi.Clostridiale.Veillonellaceae.Phascolarctobacterium
+Clostridi.Clostridiale.Veillonellaceae.Schwartzia
+Clostridi.Clostridiale.Veillonellaceae.Selenomonas
+Clostridi.Clostridiale.Veillonellaceae.Sporomusa
+Clostridi.Clostridiale.Veillonellaceae.Succiniclasticum
+Clostridi.Clostridiale.Veillonellaceae.unclassified
+Clostridi.Clostridiale.Veillonellaceae.Veillonella
+Clostridia.Thermoanaerobacterales
+Clostridia.Thermoanaerobacterales.Thermoanaerobacteraceae
+Clostridia.Thermoanaerobacterales.Thermoanaerobacteraceae.Thermoanaerobacterium
diff --git a/examples/simple/run.sh b/examples/simple/run.sh
new file mode 100755
index 0000000..d84ea52
--- /dev/null
+++ b/examples/simple/run.sh
@@ -0,0 +1,3 @@
+#!/bin/sh
+graphlan_annotate.py core_genes.txt core_genes.annot.xml --annot annot.txt
+graphlan.py core_genes.annot.xml core_genes.png --dpi 150 --size 4 --pad 0.2
diff --git a/examples/vaginal_microbiota/PIPELINE.sh b/examples/vaginal_microbiota/PIPELINE.sh
new file mode 100755
index 0000000..b5c0d1e
--- /dev/null
+++ b/examples/vaginal_microbiota/PIPELINE.sh
@@ -0,0 +1,14 @@
+# !/bin/bash
+
+# remove the generated files, if any
+echo "Removing files"
+rm -f annot.txt tree.txt outtree.txt outimg.png outimg.svg
+
+# convert it!
+echo "Converting to GraPhlAn"
+export2graphlan.py -i stm_otu_table_with_taxonomy.biom -a annot.txt -t tree.txt --discard_otus --most_abundant 50 \
+--annotations 2,3,4,5,6 --external_annotations 7 --title "STM" --internal_levels --max_clade_size 300
+
+echo "Running GraPhlAn"
+graphlan_annotate.py --annot annot.txt tree.txt outtree.txt # attach annotation to the tree
+graphlan.py --dpi 300 --size 7.0 outtree.txt outimg.png # generate the beautiful image
diff --git a/examples/vaginal_microbiota/stm_otu_table_with_taxonomy.biom b/examples/vaginal_microbiota/stm_otu_table_with_taxonomy.biom
new file mode 100644
index 0000000..f2ceb26
--- /dev/null
+++ b/examples/vaginal_microbiota/stm_otu_table_with_taxonomy.biom
@@ -0,0 +1 @@
+{"id": "None","format": "Biological Observation Matrix 1.0.0","format_url": "http://biom-format.org","type": "OTU table","generated_by": "interpreter","date": "2013-05-06T16:19:15.951177","matrix_type": "sparse","matrix_element_type": "int","shape": [1501, 993],"data": [[0,0,2.0],[0,1,1.0],[1,2,1.0],[1,3,2.0],[1,4,2.0],[2,5,43.0],[3,0,4.0],[3,2,3.0],[3,3,2.0],[3,6,1.0],[3,7,1.0],[3,8,11.0],[3,9,6.0],[3,10,2.0],[3,11,1.0],[3,12,1.0],[3,13,3.0],[3,14,4.0],[3,15,4.0],[3,16,1.0],[3,17,4.0],[ [...]
\ No newline at end of file
diff --git a/graphlan.py b/graphlan.py
new file mode 100755
index 0000000..f285659
--- /dev/null
+++ b/graphlan.py
@@ -0,0 +1,70 @@
+#!/usr/bin/env python
+
+#------------------------------------------------------------------------------
+# NAME: graphlan.py
+# DESCRIPTION: GraPhlAn is a python program for creating images of circular
+# cladogram starting from a tree given in PhyloXML format. The
+# PhyloXML input tree can be formatted and annotated using the
+# graphlan_annotate.py script.
+#
+# Author: Nicola Segata
+# email: nsegata at hsph.harvard.edu
+#
+#
+#------------------------------------------------------------------------------
+
+__author__ = 'Nicola Segata (nsegata at hsph.harvard.edu)'
+__version__ = '0.9.7'
+__date__ = '21 July 2014'
+
+
+from sys import argv
+from argparse import ArgumentParser
+from src.graphlan_lib import CircTree as CTree
+
+
+def read_params(args):
+ parser = ArgumentParser(description= "GraPhlAn "+__version__+" ("+__date__+") "
+ "AUTHORS: "+__author__)
+ arg = parser.add_argument
+
+ arg('intree', type=str, default = None, metavar='input_tree',
+ help = "the input tree in PhyloXML format " )
+ arg('outimg', type=str, default = None, metavar='output_image',
+ help = "the output image, the format is guessed from the extension "
+ "unless --format is given. Available file formats are: png, "
+ "pdf, ps, eps, svg" )
+ arg('--format', choices=['png','pdf','ps','eps','svg'], default=None,
+ type = str, metavar=['output_image_format'],
+ help = "set the format of the output image (default none meaning that "
+ "the format is guessed from the output file extension)")
+ arg('--warnings', default=1, type=int,
+ help = "set whether warning messages should be reported or not (default 1)")
+ arg('--positions', default=0, type=int,
+ help = "set whether the absolute position of the points should be reported on "
+ "the standard output. The two cohordinates are r and theta")
+ arg('--dpi', default=72, type=int, metavar='image_dpi',
+ help = "the dpi of the output image for non vectorial formats")
+ arg('--size', default=7.0, type=float, metavar='image_size',
+ help = "the size of the output image (in inches, default 7.0)")
+ arg('--pad', default=0.5, type=float, metavar='pad_in',
+ help = "the distance between the most external graphical element and "
+ "the border of the image")
+ arg('--external_legends', default=False, action='store_true',
+ help = "specify whether the two external legends should be put in separate file or keep them "
+ "along with the image (default behavior)")
+ arg( '-v','--version', action='version', version="GraPhlAn version "+__version__+" ("+__date__+")",
+ help="Prints the current GraPhlAn version and exit" )
+ return vars(parser.parse_args())
+
+
+if __name__ == "__main__":
+ args = read_params( argv )
+ ctree = CTree( args['intree'], args['warnings'] )
+ ctree.positions = args['positions']
+ ctree.draw( args['outimg'],
+ out_format = args['format'],
+ out_dpi = args['dpi'],
+ out_size = args['size'],
+ out_pad = args['pad'],
+ external_legends = args['external_legends'])
diff --git a/graphlan_annotate.py b/graphlan_annotate.py
new file mode 100755
index 0000000..41bcda6
--- /dev/null
+++ b/graphlan_annotate.py
@@ -0,0 +1,57 @@
+#!/usr/bin/env python
+
+#------------------------------------------------------------------------------
+# NAME: graphlan_annotate.py
+# DESCRIPTION: TBA
+#
+# Author: Nicola Segata
+# email: nsegata at hsph.harvard.edu
+#
+#
+#------------------------------------------------------------------------------
+
+__author__ = 'Nicola Segata (nsegata at hsph.harvard.edu)'
+__version__ = '0.9'
+__date__ = '22 August 2012'
+
+
+from sys import argv
+from argparse import ArgumentParser
+from src.graphlan_lib import CircTree as CTree
+
+
+def read_params(args):
+ parser = ArgumentParser(
+ description="GraPhlAn annotate module "+__version__+" ("+__date__+") "
+ "AUTHORS: "+__author__)
+ arg = parser.add_argument
+
+ arg('intree', type=str, metavar='input_tree',
+ help = "the input tree in Newick, Nexus, PhyloXML or "
+ "plain text format" )
+ arg('outtree', type=str, metavar='output_tree', nargs='?',
+ default = None,
+ help = "the output tree in PhyloXML format containing the newly "
+ "added annotations. If not specified, the input tree file "
+ "will be overwritten")
+ arg('--annot', default=None, metavar="annotation_file", type=str,
+ help = "specify the annotation file" )
+ #arg('-c', type=str, metavar='clade_name', default=None,
+ # help = "For command line annotation specifies the clade to be "
+ # "annotated (\* means global setting)")
+ #arg('-p', type=str, metavar='property_name', default=None,
+ # help = "For command line annotation specifies the property to be "
+ # "annotated")
+ #arg('-v', type=str, metavar='property_name', default=None,
+ # help = "For command line annotation specifies the value to be "
+ # "annotated")
+ arg( '-v','--version', action='version', version="GraPhlAn version "+__version__+" ("+__date__+")",
+ help="Prints the current GraPhlAn version and exit" )
+ return vars(parser.parse_args())
+
+
+if __name__ == "__main__":
+ args = read_params( argv )
+ ctree = CTree( args['intree'] )
+ ctree.annotate( args['annot'], args['outtree'] if args['outtree'] else args['intree'] ) # ,
+ # c = args['c'], p = args['p'], v = args['v'])
diff --git a/license.txt b/license.txt
new file mode 100644
index 0000000..e5b7652
--- /dev/null
+++ b/license.txt
@@ -0,0 +1,7 @@
+Copyright (c) 2012, Nicola Segata and Curtis Huttenhower
+
+Permission is hereby granted, free of charge, to any person obtaining a copy of this software and associated documentation files (the "Software"), to deal in the Software without restriction, including without limitation the rights to use, copy, modify, merge, publish, distribute, sublicense, and/or sell copies of the Software, and to permit persons to whom the Software is furnished to do so, subject to the following conditions:
+
+The above copyright notice and this permission notice shall be included in all copies or substantial portions of the Software.
+
+THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE.
diff --git a/readme.txt b/readme.txt
new file mode 100644
index 0000000..ea26f56
--- /dev/null
+++ b/readme.txt
@@ -0,0 +1,468 @@
+GraPhlAn is a software tool for producing high-quality circular
+representations of taxonomic and phylogenetic trees. GraPhlAn focuses on
+concise, integrative, informative, and publication-ready representations of
+phylogenetically- and taxonomically-driven investigation.
+
+You can find below the instruction for installing and using the software.
+If you have any questions or comment please refer to the project home page at
+https://bitbucket.org/nsegata/graphlan
+or to the GraPhlAn google group:
+https://groups.google.com/d/forum/graphlan-users
+or email me at
+nsegata at hsph.harvard.edu
+
+
+==============================================================================
+ INSTALLATION
+..............................................................................
+
+GraPhlAn is available in bitbucket and should be obtained using Mercurial
+(http://mercurial.selenic.com/) at https://bitbucket.org/nsegata/graphlan/
+
+
+In a Unix environment, this means you have to type:
+$ hg clone ssh://hg@bitbucket.org/nsegata/graphlan
+or
+$ hg clone https://hg@bitbucket.org/nsegata/graphlan
+
+This will download the GraPhlAn repository locally in the "graphlan"
+subfolder. You then have to put this subfolder into the system path so that
+you can use GraPhlAn from any location in your system:
+$ export PATH=`pwd`/graphlan/:$PATH
+
+Adding the above line into the bash configuration file will make the path
+addition permanent.
+
+For Windows or MacOS systems a similar procedure should be followed. Is is also
+possible (but not recommended) to obtain the software using the download link
+available at https://bitbucket.org/nsegata/graphlan/src ("get source" on the
+top right corner).
+
+
+
+==============================================================================
+ PREREQUISITES
+..............................................................................
+
+You need to have the following programs and libraries installed:
+- python 2.7 or higher ( http://www.python.org/ )
+- the biopython python library 1.6 or higher ( http://biopython.org )
+- the matplotlib python library 1.1 or higher
+ ( http://matplotlib.sourceforge.net )
+
+
+
+==============================================================================
+ USAGE
+..............................................................................
+
+The GraPhlAn package consists in two main scripts:
+1- graphlan.py
+2- graphlan_annotate.py
+
+The first produces graphical output of an input tree in any of the three most
+popular format: Newick, PhyloXML, or text format. The second modifies any
+input tree (in any of the three standard format) adding additional
+information regarding structural or graphical aspects of the tree (like colors
+and style of the taxa, labels, shadows, heatmaps, ...); graphlan_annotate.py
+generates PhyloXML files that can be converted into images by graphlan.py.
+
+
+ ...........
+
+
+More specifically, here are all the options one can set for graphlan.py:
+
+usage: graphlan.py [-h] [--format ['output_image_format']]
+ [--warnings WARNINGS] [--positions POSITIONS]
+ [--dpi image_dpi] [--size image_size] [--pad pad_in]
+ [--external_legends] [-v]
+ input_tree output_image
+
+GraPhlAn 0.9.7 (21 July 2014) AUTHORS: Nicola Segata
+(nsegata at hsph.harvard.edu)
+
+positional arguments:
+ input_tree the input tree in PhyloXML format
+ output_image the output image, the format is guessed from the
+ extension unless --format is given. Available file
+ formats are: png, pdf, ps, eps, svg
+
+optional arguments:
+ -h, --help show this help message and exit
+ --format ['output_image_format']
+ set the format of the output image (default none
+ meaning that the format is guessed from the output
+ file extension)
+ --warnings WARNINGS set whether warning messages should be reported or not
+ (default 1)
+ --positions POSITIONS
+ set whether the absolute position of the points should
+ be reported on the standard output. The two
+ cohordinates are r and theta
+ --dpi image_dpi the dpi of the output image for non vectorial formats
+ --size image_size the size of the output image (in inches, default 7.0)
+ --pad pad_in the distance between the most external graphical
+ element and the border of the image
+ --external_legends specify whether the two external legends should be put
+ in separate file or keep them along with the image
+ (default behavior)
+ -v, --version Prints the current GraPhlAn version and exit
+
+ ...........
+
+
+Input tree files for graphlan.py can be generated, personalized, and annotated
+using the graphlan_annotate.py module. In addition to the tree topology and
+(possibly) branch lengths, graphlan_annotate.py reads an "annotation file"
+(--annot option) which specifies the graphical options for the tree. The
+syntax of the annotation file is described comprehensively below. Here is the
+command line invocation syntax.
+
+usage: graphlan_annotate.py [-h] [--annot annotation_file] [-v]
+ input_tree [output_tree]
+
+GraPhlAn annotate module 0.9 (22 August 2012) AUTHORS: Nicola Segata
+(nsegata at hsph.harvard.edu)
+
+positional arguments:
+ input_tree the input tree in Newick, Nexus, PhyloXML or plain
+ text format
+ output_tree the output tree in PhyloXML format containing the
+ newly added annotations. If not specified, the input
+ tree file will be overwritten
+
+optional arguments:
+ -h, --help show this help message and exit
+ --annot annotation_file
+ specify the annotation file
+ -v, --version Prints the current GraPhlAn version and exit
+
+
+
+
+==============================================================================
+ COMMAND AND SYNTAX OF THE ANNOTATION FILE
+..............................................................................
+
+The annotation file is a tab-delimited file listing the graphical options for
+clades. Usually each line has three fields: the name of the clade, the name of
+the option, and the value to assign to the option. Lines can however have two
+fields (typically for "global" option not referred to a specific clade) or
+four fields when the external rings (a sort of circular heatmap) is specified.
+
+Below we report and describe all available options and their syntax subdivided
+by option types.
+
+
+------------------------------------------------------------------------------
+ GLOBAL TREE OPTIONS:
+------------------------------------------------------------------------------
+
+Global structural and visual characteristics affecting the entire tree are
+specified in the annotation file with a two-column tab separated syntax with the
+following pattern:
+
+global_tree_option global_tree_option_value
+
+where global_tree_option can be any of the following:
+
+ignore_branch_len [def. 0 = False] : specify whether to display the tree with
+ fixed branch length (i.e. 0) or with the values specified in the input
+ tree. If the input tree is not containing branch length information, branch
+ lengths will not be showed regardless of this option
+
+total_plotted_degrees [def. 360] : the total circular portion used in plotting
+ the tree. 360 means that the tree uses the full rotational space. Small
+ trees are usually best displayed with a limited total_plotted_degrees value.
+
+start_rotation [def 0] : the default starting rotational position for the first
+ leaf of the tree
+
+clade_separation [def 0.0] : specify a fractional separation between clades
+ which is proportional to the branch distance between subtrees. It option can
+ be used to visually separate more clades that are reciprocally deep
+ branching.
+
+branch_bracket_depth [def 0.25] : the relative position of the branch bracket
+ which is the radial segment from which the child taxa branches originate.
+
+branch_bracket_width [def 1.0] : the width of the branch bracket relative to
+ the position of the most separated child roots
+
+branch_thickness [def 0.75] : the global thickness of the lines connecting taxa
+
+branch_color [def black] : the global thickness of the lines connecting taxa
+
+branch_color_from_ancestor [def 1] : whether to use the color of the closest
+ ancestor colored taxa for the downstream branches
+
+
+------------------------------------------------------------------------------
+ GLOBAL GRAPHICAL OPTIONS:
+------------------------------------------------------------------------------
+
+Global options affecting the graphical appearance of annotations, legends, and
+markers specified in the annotation file with a two-column tab separated syntax
+with the following pattern:
+
+global_graphical_option global_graphical_option_value
+
+where global_graphical_option can be any of the following:
+
+title : set the title of the output image
+
+title_font_size [def. 15] : set the font size used to display the title
+
+annotation_background_width [def. 0.1] : set the width of the annotation, you
+ can think of it as inserting a space before and after the label of the
+ annotation
+
+annotation_background_alpha [def. 0.2] : set the transparency level of the
+ background. Keep in mind that some annotations can overlap
+
+annotation_background_separation [def. 0.02] : set how much space keep between
+ leafs and the last labels
+
+annotation_background_offset [def. 0.02] : set the end of the circle that
+ contains the tree, where the exteran optional barplots start
+
+annotation_legend_font_size [def. 7] : set the font size used in the annotation
+ legend
+
+class_legend_font_size [def. 7] : set the font size used in the class legend
+
+class_legend_marker_size [def. 1.0] : the size of the markers in the legend
+
+internal_labels_rotation [def. None] : set the internal labels orientation. It
+ does not work well, already put in the known issues list
+
+------------------------------------------------------------------------------
+ GRAPHICAL TREE OPTIONS:
+------------------------------------------------------------------------------
+
+The graphical tree options are the most common way of personalizing the trees.
+They can be referred to specific clade, to set of clades, or to all clade. The
+syntax is the following:
+
+[clade_name{+|*|^}] graphical_tree_option graphical_tree_option_value
+
+If the clade name is omitted the option is applied to ALL clades. The clade
+can be specified with the full label comprising all names from the root of the
+tree or with the last level only (if last level names are not unique, multiple
+matching clades will be affected by the command). Optionally, at the end of the
+clade name, one of the following character can be added (see below for the
+meaning of these symbols): +, *, ^
+
+The "graphical_tree_option" can be:
+
+clade_marker_size [def. 20.0] : the size of the marker representing the root
+ of the clade inside the tree
+
+clade_marker_color [def. #FFFFFF, i.e. white] : the fill color of the marker
+ representing the root of the clade inside the tree
+
+clade_marker_shape [def. 'o', i.e. circle] : the shape of the clade marker.
+ See the Marker Shapes table below for the allowed options
+
+clade_marker_edge_width [def. 0.5] : the thickness of the border for clade
+ markers
+
+clade_marker_edge_color [def. #000000, i.e. black] : the color of the markers'
+ border
+
+clade_marker_label : specify a label to insert in the specified clade
+
+clade_marker_font_size [def. 7] : the size of the font color for the clade
+ marker label specified
+
+clade_marker_font_color [def 'k', i.e. black] : the font color of the clade
+ marker label specified
+
+When added after the name of a valid clade, the following three characters can
+be used to apply the same property to multiple parts of the clade' subtree
+
+* : the specified clade and all its descendants are affected by the property
++ : the specified clade and all its terminal nodes are affected
+^ : all (and only) the terminal nodes of the specified clade are affected
+
+------------------------------------------------------------------------------
+ ANNOTATION OPTIONS
+------------------------------------------------------------------------------
+
+[clade_name] annotation_option graphical_tree_option_value
+
+We call annotations the shadings highlighting clades and the corresponding
+subtree. Annotations can be colored, their alpha-channel can be globally
+regulated, and have a label associated with them. Specifically, the options
+available for annotations are:
+
+annotation [def. no annotation] : the label the be associated and displayed for
+ the annotation. This can assume several formats:
+ 1. str (a string not containing ':'): the string to be displayed entirely
+ (an only) on the shading
+ 2. key:str : the (supposedly short) key will be displayed on the
+ annotation shading, whereas the full key:string label will be reported
+ as external legend
+ 3. *:str : a key will be generated and used as the 2. "key:str" case
+ 4. * : the name of the clade (specifically the last taxonomic level only)
+ will be used as the 'str' in the 1. case above
+ 5. *:* : the combination of the 3. and 4. cases above
+
+annotation_font_size [def. 7] : the font size of the annotation label
+
+annotation_font_stretch [def. 0] : horizontal font compactness (0 is minimal)
+
+annotation_rotation [def. 0] : the rotation of the label. As default the rotation
+ is perpendicular to the radial position of the label. It can be changed to
+ 90 so that the labels are less likely to overlap
+
+annotation_background_color [def. grey] : the color of the annotation background
+
+annotation_background_edge_color [def annotation_background_color] : the color
+ of the edge for the annotation background. NOT IMPLEMENTED YET
+
+
+------------------------------------------------------------------------------
+ INTERNAL ANNOTATION OPTIONS
+------------------------------------------------------------------------------
+
+annotation_option annotation_r annotation_value
+
+Internal annotations are used to label the levels in a tree (e.g. specify the
+level of bacterial species in a taxonomic tree). annotation_r specifies the
+radial distance from the center (i.e. the number of levels). Currently,
+annotation_option can be:
+
+internal_label : the label to be displayed
+
+internal_label_font_size [def. 8] : the font
+
+The rotational position of the labels can be specified with the
+internal_labels_rotation parameter (see GLOBAL GRAPHICAL OPTIONS)
+
+------------------------------------------------------------------------------
+ RING OPTIONS
+------------------------------------------------------------------------------
+
+We call rings the graphical elements external to the tree itself that can be
+seen as "circular heatmaps", "circular barplots", and actually more (like
+indicator elements). These "rings" are linked directly to the internal tree as
+each segment of the rings correspond to a tree leaf (and potentially to internal
+nodes as well). Multiple rings can be specified for the same image and each must
+have a progressive associated number (level "1" being the most internal ring).
+
+The general syntax for rings is:
+
+[clade_name] ring_option ring_level ring_option_value
+
+If clade_name is not present or if it is "*" the ring option is applied to all
+the ring sectors in the "ring_level". The "ring_level" is a integer number that
+must always be specified.
+
+Here are the possible ring options:
+
+ring_color [def. black] : the color of the ring segment
+
+ring_width [def. 1.0] : the width of the ring segment a fraction of the total
+ circular width available for the specific clade
+
+ring_height [def. highest height for the rings in the same level, or 0.1 if no
+ heights are specific] : the height of the circular segment. If not specific
+ the same default height (0.1*size of the tree) is applied for all ring
+ segment in the level, otherwise the height is equal to the biggest height
+ value in the level.
+
+ring_alpha [def. 1.0]: the transparency value. 0.0 means completely transparent
+ (thus invisible), 1.0 means completely opaque (no transparencies)
+
+ring_shape [def. R]: the shape of the ring. Default is 'R' for rectangular which
+ means that the whole available area is used. The alternatives are currently
+ 'v' or '^' which mean triangular shape (with opposite directions) that can
+ be used as pointing arrow for highlighting specific clades.
+
+ring_edge_width [def 0.1]: the width of the border of the ring segment
+
+ring_edge_color [def None, which means 'ring_color']: the color of the border
+ of the ring segment
+
+Some additional ring options refer to non clade-specific aspects like the label
+of the ring itself or the graphical separation between rings. These options are
+specified without a clade name in the following tree-column format:
+
+global_ring_option ring_level global_ring_option_value
+
+Specifically, the ring options can be:
+
+ring_label [def. None]: the label to be displayed at "stat_rotation" position
+ for the rings. total_plotted_degrees should be less than 360 to make space
+ for these labels
+
+ring_label_color [def. black]: the color of the ring label
+
+ring_label_font_size [def. 11]: the font size of the ring labels
+
+ring_internal_separator_thickness [def. 0.0 which means absent]: the thickness
+ of the circular line separating different ring levels. This is referred
+ to the most internal of the two sides of each ring.
+
+ring_external_separator_thickness [def. 0.0 which means absent]: the thickness
+ of the circular line separating different ring levels. This is referred to
+ the most external of the two sides of each ring.
+
+ring_separator_color [def. 'k' for black]: the color of the circular line
+ separating different ring levels.
+
+
+ ...........
+
+
+------------------------------------------------------------------------------
+ COLORS
+------------------------------------------------------------------------------
+
+Colors are strings that can be:
+- one of the following 'default' colors: blue, green, red, cyan, magenta,
+ yellow, black, white
+- a one-letter shortcut for the above colors: 'b' (blue), 'g' (green),
+ 'r' (red), 'c' (cyan), 'm' (magenta), 'y' (yellow), 'k' (black),
+ 'w' (white)
+
+- a RGB color code in the hexadecimal format: #rrggbb, for example #FF0000
+ corresponds to (full) red
+
+------------------------------------------------------------------------------
+ MARKER SHAPES:
+------------------------------------------------------------------------------
+
+As of August 2012 we support the marker types available in matplotlib version
+1.1.1. Specifically here are the codes for the markers. Note that some of them
+are shapes with internal color-filled space, other are edge- or point-only
+markers.
+
+'.' : point marker
+',' : pixel marker
+'o' : circle marker
+'v' : triangle_down marker
+'^' : triangle_up marker
+'<' : triangle_left marker
+'>' : triangle_right marker
+'1' : tri_down marker
+'2' : tri_up marker
+'3' : tri_left marker
+'4' : tri_right marker
+'s' : square marker
+'p' : pentagon marker
+'*' : star marker
+'h' : hexagon1 marker
+'H' : hexagon2 marker
+'+' : plus marker
+'x' : x marker
+'D' : diamond marker
+'d' : thin_diamond marker
+'|' : vline marker
+'_' : hline marker
+
+
+==============================================================================
+
diff --git a/src/__init__.py b/src/__init__.py
new file mode 100644
index 0000000..e69de29
diff --git a/src/graphlan_lib.py b/src/graphlan_lib.py
new file mode 100644
index 0000000..810d0c4
--- /dev/null
+++ b/src/graphlan_lib.py
@@ -0,0 +1,1079 @@
+from Bio import Phylo
+from Bio.Phylo import PhyloXML
+from Bio.Phylo import PhyloXMLIO
+from collections import defaultdict as ddict
+from Bio.Phylo.PhyloXML import Property as Prop
+from Bio.Phylo.PhyloXML import Clade as PClade
+from Bio.Phylo.BaseTree import Tree as BTree
+from Bio.Phylo.BaseTree import Clade as BClade
+import string
+from numpy import pi as rpi
+rpi2 = 2.0*rpi
+import numpy as np
+import array as arr
+import collections as colls
+from matplotlib import collections
+import matplotlib.patches as mpatches
+import matplotlib.lines as lines
+import matplotlib
+matplotlib.use('Agg')
+from pylab import *
+from pyphlan import PpaTree
+
+
+clade_attr = ( ( 'clade_marker_size', float, 20.0 ),
+ ( 'clade_marker_color', str, '#FFFFFF' ),
+ ( 'clade_marker_edge_width', float, 0.5 ),
+ ( 'clade_marker_shape', str, 'o' ),
+ ( 'clade_marker_edge_color', str, '#000000' ),
+ ( 'clade_marker_label', str, '' ),
+ ( 'clade_marker_font_size', str, '7' ),
+ ( 'clade_marker_font_color', str, 'k' ),
+ ( 'class_label', str, "" ), # to rem
+ ( 'annotation_font_size', int, 7 ),
+ ( 'annotation_font_stretch', int, 0 ),
+ ( 'annotation_background_color', str, '#FF0000' ),
+ ( 'annotation_background_edge_color',str, '#FF0000' ), # not implemented yet
+ ( 'annotation', str, '' ),
+ ( 'annotation_rotation', int, 0 ),
+ )
+clade_attr_d = dict([(p,(t,d)) for p,t,d in clade_attr])
+
+ext_attr = ( ( 'ring_color', str, '#000000' ),
+ ( 'ring_width', float, 1.0 ),
+ ( 'ring_height', float, -1.0 ),
+ ( 'ring_alpha', float, 1.0 ),
+ ( 'ring_shape', str, "R" ),
+ ( 'ring_label', str, None ),
+ ( 'ring_label_font_size', int, 11 ),
+ ( 'ring_label_color', str, 'k' ),
+ ( 'ring_edge_width', float, 0.1 ),
+ ( 'ring_edge_color', str, None ),
+ ( 'ring_internal_separator_thickness', float, 0.0 ),
+ ( 'ring_separator_color', str, 'k' ),
+ ( 'ring_external_separator_thickness', float, 0.0 ),
+ )
+ext_attr_d = dict([(p,(t,d)) for p,t,d in ext_attr])
+
+int_attr = (
+ ( 'internal_label', str, None ),
+ ( 'internal_label_font_size', int, 8 ),
+ )
+int_attr_d = dict([(p,(t,d)) for p,t,d in int_attr])
+
+structural_attr = ( ( 'ignore_branch_len', int, 0 ),
+ ( 'total_plotted_degrees', float, 360.0 ),
+ ( 'start_rotation', float, 180.0 ),
+ ( 'clade_separation', float, 0.0 ),
+ ( 'branch_bracket_width', float, 0.25 ),
+ ( 'branch_bracket_depth', float, 1.0 ),
+ )
+
+global_graphical_attr = ( ( 'annotation_background_width', float, 0.1 ),
+ ( 'annotation_background_alpha', float, 0.2 ),
+ ( 'annotation_background_separation', float, 0.02 ),
+ ( 'annotation_background_offset', float, 0.02 ),
+ ( 'class_legend_font_size', int, 7 ),
+ ( 'title', str, "" ),
+ ( 'title_font_size', int, 15 ),
+ ( 'class_legend_marker_size', float, 1.0 ),
+ ( 'annotation_legend_font_size', int, 7 ),
+ ( 'internal_labels_rotation', float, None ),
+ )
+
+branch_attr = ( ( 'branch_thickness', float, 0.75 ),
+ ( 'branch_color', str, '#000000' ),
+ ( 'branch_color_from_ancestor', int, 1 ),
+ )
+
+
+leg_sep = '_._._'
+leg_attr = ( ( 'annotation_background_color', str, "w" ),
+ ( 'annotation_background_edge_color', str, "k" ),
+ ( 'clade_marker_color', str, "w" ),
+ ( 'clade_marker_edge_width', float, 0.5 ),
+ ( 'clade_marker_size', float, 20.0 ),
+ ( 'keys', str, "?" ),
+ )
+
+lev_sep = '.'
+
+legal_options = set(zip(*clade_attr+ext_attr+int_attr+structural_attr+global_graphical_attr+branch_attr+leg_attr)[0]) | set(['class'])
+
+def random_keys(used_keys):
+ n = 1
+ nl = string.ascii_uppercase+string.ascii_lowercase
+ while True:
+ nl = [n for n in nl]+[a+b for a in nl for b in nl]
+ for l in nl:
+ if l not in used_keys:
+ yield l
+
+linearized_circle = list(arange( 0, rpi2,0.01))
+
+class CircTree(PpaTree):
+
+ def annotate( self, inp_file, out_file = None,
+ c = None, p = None, v = None ):
+ term_names = set([t.name for t in self.tree.get_terminals()])
+ nterm_names = set([t.name for t in self.tree.get_nonterminals()])
+ clade_names = term_names | nterm_names
+ props, gprops, classes = ddict(dict), {}, ddict(dict)
+
+ if c and p and v and not inp_file:
+ lines = [ "\t".join([c,p,v]) +"\n" ]
+ elif not inp_file:
+ lines = []
+ else:
+ try:
+ with open( inp_file ) as inpf:
+ lines = inpf.readlines()
+ except IOError:
+ sys.stderr.write("Error: annotation file not found: "
+ ""+inp_file+"\n")
+ sys.exit(0)
+ except Exception:
+ sys.stderr.write("Error in reading the annotation file: "
+ ""+inp_file+"\n")
+ sys.exit(0)
+
+ if not out_file:
+ out_file = inp_file
+
+ def legal( prop ):
+ if prop not in legal_options:
+ sys.stderr.write( "Error: \"%s\" is not a legal option\nExiting...\n\n" % prop )
+ sys.exit(0)
+
+ self._tmp_levs = set()
+ for line in (l.strip().split('\t') for l in lines if l[0] != '#'):
+ ll = len(line)
+ if ll == 2:
+ legal( line[0] ) # in legal_options, "%s is not a valid option" % line[1]
+ gprops[line[0]] = line[1]
+ elif ll == 3:
+ clade,prop,val = line
+ if clade == '*' and prop != 'annotation':
+ legal( prop )
+ gprops[prop] = val
+ elif clade in ext_attr_d:
+ prop,lev = clade,prop
+ legal( prop )
+ ilev = int(lev)
+ if prop not in gprops:
+ gprops[prop] = {}
+ if ilev not in gprops[prop]:
+ gprops[prop][ilev] = val
+ elif clade in int_attr_d:
+ prop,lev = clade,prop
+ legal( prop )
+ flev = float(lev)
+ if prop not in gprops:
+ gprops[prop] = {}
+ gprops[prop][flev] = val
+ elif clade[-1] in ['*','+','^']:
+ legal( prop )
+ if len(clade) == 1:
+ cl = self.tree.root
+ else:
+ cl = list(self.tree.find_clades( {"name": clade[:-1]} ))
+ if cl != 1: #??
+ cl = list(self.tree.find_clades( {"name": clade[:-1].split(lev_sep)[-1]} ))
+ for ccl in cl:
+ if clade[-1] in ['*']:
+ for nt in ccl.get_nonterminals():
+ props[nt.full_name][prop] = val
+ for t in ccl.get_terminals():
+ props[t.full_name][prop] = val
+ if not ( clade[-1] in ['^'] or clade[-1] in ['+'] or clade[-1] in ['*']):
+ props[clade[:-1]][prop] = val
+ elif clade.split(lev_sep)[-1] in clade_names:
+ legal( prop )
+ props[clade][prop] = val
+ else:
+ legal( prop )
+ classes[clade][prop] = val
+ elif ll == 4:
+ clade,prop,lev,val = line
+ legal( prop )
+ if clade == '*':
+ ilev = int(lev)
+ if prop in gprops :
+ gprops[prop][ilev] = val
+ else:
+ gprops[prop] = {ilev:val}
+ elif clade.split(lev_sep)[-1] in clade_names:
+ ilev = int(lev)
+ self._tmp_levs.add( ilev )
+ if prop in props[clade]:
+ props[clade][prop][ilev] = val
+ else:
+ props[clade][prop] = {ilev:val}
+ if prop not in gprops:
+ gprops[prop] = {}
+ if ilev not in gprops[prop]:
+ gprops[prop][ilev] = ext_attr_d[prop][1]
+ else:
+ print ll
+ print clade.split(lev_sep)[-1]
+ print clade_names
+ print line
+ sys.stderr.write( "Classes not implemented for external "
+ "annotations\n" )
+ exit(1)
+
+
+ def _rec_annotate_( clade, rkeys_gen, path ):
+ name = clade.name if clade.name else ""
+ npath = lev_sep.join( ([path] if path else []) + [name] )
+
+ fn = None
+ for n in [npath,name]:
+ if n in props:
+ lprop = {}
+ if not hasattr( clade, "properties" ):
+ clade.properties = []
+
+ if 'class' in props[n]:
+ for k,v in classes[props[n]['class']].items():
+ lprop[k] = v
+ for k,v in props[n].items():
+ if type(v) == dict:
+ for kk,vv in v.items():
+ lprop["__".join(['ext',str(kk),k])] = vv
+ else:
+ lprop[k] = v
+
+ cp = []
+ for k,v in lprop.items():
+ value = v
+ if k == 'annotation':
+ if v.count(":"):
+ kkk,vvv = v.split(":")
+ if kkk == '*':
+ if fn is None:
+ kkk = rkeys_gen.next()
+ else:
+ kkk = fn
+ fn = kkk
+ if vvv == '*':
+ vvv = clade.name
+ value = kkk + ":" + vvv
+ elif v == '*':
+ value = clade.name
+ cp.append( Prop( value=value, ref='A:1', id_ref=k,
+ applies_to='clade', datatype='xsd:string') )
+
+ clade.properties = [p for p in clade.properties
+ if p.id_ref != k] + cp
+ #break
+ for c in clade.clades:
+ _rec_annotate_( c, rkeys_gen, npath )
+
+ all_keys = set()
+ for p in props.values():
+ if 'annotation' in p and p['annotation'].count(":"):
+ all_keys.add( p['annotation'].split(":")[0] )
+ rkeys = random_keys(all_keys)
+
+
+ _rec_annotate_( self.tree.root, rkeys, "" )
+ tgprop = []
+ for k,v in gprops.items():
+ if type(v) == dict:
+ for kk,vv in v.items():
+ if k in int_attr_d:
+ pn = "__".join(['int',str(kk),k])
+ else:
+ pn = "__".join(['ext',str(kk),k])
+ tgprop += [Prop( value=vv, id_ref=pn,
+ ref='A:1', applies_to='phylogeny',
+ datatype='xsd:string' )]
+ else:
+ tgprop += [Prop( value=v, id_ref=k,
+ ref='A:1', applies_to='phylogeny',
+ datatype='xsd:string' )]
+
+ ckeys = sorted([c for c in classes.keys()
+ if not ('label' in classes[c] and classes[c]['label'] in ['none','None'])])
+ if ckeys:
+ newidrefs = ['leg_keys']
+ val = leg_sep.join([classes[k]['label']
+ if 'label' in classes[k] else k for k in ckeys])
+ p = Prop( value = val, id_ref="leg_keys",
+ ref='A:1', applies_to='phylogeny', datatype='xsd:string')
+ tgprop.append( p )
+ leg_keys = []
+ for att in [a for a,b,c in leg_attr if a != 'keys']:
+ leg_keys.append( "leg_"+att )
+ val = leg_sep.join([classes[k][att]
+ if classes and att in classes[k] else "." for k in ckeys])
+ p = Prop( value = val, id_ref="leg_"+att,
+ ref='A:1', applies_to='phylogeny', datatype='xsd:string')
+ tgprop.append( p )
+ else:
+ newidrefs = []
+ self.tree.properties = [p for p in self.tree.properties
+ if p not in newidrefs] + tgprop
+
+ for att,typ,default in structural_attr:
+ if hasattr(self,att):
+ np = Prop( value = getattr(self,att), id_ref=att,
+ ref='A:1', applies_to='phylogeny',
+ datatype='xsd:string')
+ self.tree.properties = [p for p in self.tree.properties if p != np] + [np]
+
+ Phylo.write( self.tree, out_file, "phyloxml")
+
+
+ def set_clade_data( self ):
+
+ # this step sets the rotation distance between nodes with a component
+ # proportional to the branch length distance in order to improve the
+ # visual separation between subtrees.
+ # This is executed if the user sets clade_separatio > 0.0
+ self._ord_leaves = []
+ def compute_tot_add( clade ):
+ if clade.is_terminal():
+ self._ord_leaves.append( clade )
+ return [clade]
+ ret = []
+ for c in clade.clades:
+ ret += compute_tot_add( c )
+ return ret
+ tot_dist, last = 0.0, self.tree.root
+ if self.clade_separation > 0.0:
+ ord_terms = compute_tot_add( self.tree.root )
+ for t in ord_terms:
+ tot_dist += self.tree.distance( last, t) * 0.5 / self._max_depth
+ last = t
+
+ coffset = self.start_rotation + (rpi2 - self.total_plotted_degrees) * 0.5
+ circ_step = self.total_plotted_degrees*(1.0-self.clade_separation) / self._n_terminals
+ self.circ_pos = coffset+circ_step/2
+ self._last_leaf = self.tree.root
+ self._varf = circ_step
+
+ varf = self.total_plotted_degrees*(self.clade_separation)
+ self._varf = varf/tot_dist if self.clade_separation > 0.0 else 0.0
+ self._ext_levs = set()
+ #self._ext_max_height = {}
+
+ def set_clade_data_rec( clade ):
+ if self.ignore_branch_len:
+ clade.branch_length = 1.0
+
+ for p in clade.properties:
+ typ = clade_attr_d[p.id_ref][0] if p.id_ref in clade_attr_d else lambda x:x
+ setattr( clade, p.id_ref, typ(p.value) )
+ if p.id_ref.startswith("ext__"):
+ lev,ref = p.id_ref.split("__")[1:]
+
+ if ref == 'ring_height':
+ if int(lev) not in self._ext_max_height:
+ self._ext_max_height[int(lev)] = float(p.value)
+ elif float(p.value) > self._ext_max_height[int(lev)]:
+ self._ext_max_height[int(lev)] = float(p.value)
+
+
+ """
+ if ref == 'height':
+ if int(lev) not in self._ext_max_height or self._ext_max_height[int(lev)] < float(p.value):
+ self._ext_max_height[int(lev)] = 0.0 # float(p.value)
+ else:
+ if int(lev) not in self._ext_max_height:
+ self._ext_max_height[int(lev)] = 0.0 # self._ext_max_height
+ if int(lev) in self.ext_levs and 'height' in self.ext_levs[int(lev)]:
+ self._ext_max_height[int(lev)] = self.ext_levs[int(lev)]['height']
+ #self._ext_max_height[int(lev)] = self.ext_levs[int(lev)]['height']
+ """
+
+ lev = int(lev)
+ self._ext_levs.add( lev )
+ if not hasattr( clade, "ext" ):
+ clade.ext = {}
+ if not lev in clade.ext:
+ clade.ext[lev] = {}
+ clade.ext[lev][ref] = p.value
+
+ clade.r = float(self._depths[clade.name]) / self._max_depth
+ if clade.is_terminal():
+ ld = self.tree.distance( self._last_leaf, clade )
+ gap = ld * 0.5 / self._max_depth
+ self.circ_pos += gap * self._varf
+ self.circ_pos += circ_step
+ clade.theta = self.circ_pos #% rpi2
+ clade.theta_min = clade.theta
+ clade.theta_max = clade.theta
+ self._last_leaf = clade
+ else:
+ thetas = [set_clade_data_rec( c ) for c in clade.clades]
+ mint, maxt = thetas[0], thetas[-1]
+ if mint > maxt:
+ maxt += rpi2
+ clade.theta = ((mint + maxt)*0.5 ) # % rpi2
+ clade.theta_min = min([c.theta_min for c in clade.clades])
+ clade.theta_max = max([c.theta_max for c in clade.clades])
+
+ attr = [hasattr(clade,att) for att,typ,default in clade_attr]
+
+ if clade == self.tree.root:
+ return clade.theta
+
+ if any(attr):
+ for pres,(att,typ,default) in zip(attr,clade_attr):
+ attl = getattr( self, att )
+ if pres:
+ attl.append(typ(getattr( clade, att )))
+ else:
+ attl.append( getattr( self, "default_"+att ) )
+ self._rl.append( clade.r )
+ self._tl.append( clade.theta )
+ else:
+ self._r.append( clade.r )
+ self._t.append( clade.theta )
+ if hasattr( self, "positions" ) and self.positions:
+ sys.stdout.write( "\t".join( [clade.name,str(clade.r),str(clade.theta)] ) + "\n" )
+
+ if self.ignore_branch_len:
+ lev = int(self._depths[clade.name])
+ if ( hasattr(clade,'annotation_background_color') or hasattr(clade,'annotation') ) and not lev in self._wing_levs:
+ self._wing_levs.append(lev)
+ else:
+ self._wing_levs.append([1])
+
+ return clade.theta
+
+ set_clade_data_rec( self.tree.root )
+ self._ext_levs = list(sorted(self._ext_levs))
+ self._ext_bottoms = {}
+ val = 0.0
+ for k in self._ext_levs:
+ self._ext_bottoms[int(k)] = val
+ if int(k) in self._ext_max_height and self._ext_max_height[int(k)] >= 0.0:
+ val += self._ext_max_height[k]*0.1
+ else:
+ val += .1
+
+
+ def set_exts(self):
+ for l in self._ext_levs:
+ if l not in self._ext_levs:
+ self._ext_levs[l] == {}
+ for att,typ,default in ext_attr:
+ self._ext_levs[l] = default
+ self._all_ext_attr = [v[0] for v in ext_attr]
+
+ def rec_set_exts( clade ):
+ if hasattr( clade, "ext" ):
+ ext = clade.ext
+ if clade.is_terminal():
+ cpt = clade.pc.theta if clade.pc else clade.theta - (clade.nc.theta-clade.theta) #!!
+ cnt = clade.nc.theta if clade.nc else clade.theta + (clade.theta-clade.pc.theta) #!!
+ fr_theta = ( clade.theta + cpt ) * 0.5
+ to_theta = ( clade.theta + cnt ) * 0.5
+ if fr_theta > to_theta and fr_theta > 2*rpi:
+ fr_theta -= rpi
+ to_theta -= rpi
+ if fr_theta > to_theta:
+ fr_theta -= rpi
+ else:
+ fr_theta = ( clade.fc.theta + clade.fc.pc.theta ) * 0.5 if clade.fc.pc else clade.fc.theta - abs( clade.fc.theta - clade.fc.nc.theta ) * 0.5
+ to_theta = ( clade.lc.theta + clade.lc.nc.theta ) * 0.5 if clade.lc.nc else clade.lc.theta + abs( clade.lc.theta - clade.lc.pc.theta ) * 0.5
+ if fr_theta > to_theta:
+ fr_theta -= rpi
+ for lev in clade.ext:
+ for att,typ,default in ext_attr:
+ if att in ext[lev]:
+ ext[lev][att] = typ(ext[lev][att])
+ elif att in self.ext_levs[lev]:
+ ext[lev][att] = typ(self.ext_levs[lev][att])
+ else:
+ ext[lev][att] = default
+ el = ext[lev]
+ bottom = self._wing_tot_offset + self.annotation_background_offset + self._ext_bottoms[lev]
+ height = (el['ring_height'] if el['ring_height'] >= 0.0 else 1.0)*0.1
+ width = abs(to_theta - fr_theta) * el['ring_width']
+ theta = ( fr_theta + to_theta ) * 0.5 - width * 0.5
+ if bottom + height > self._tot_offset:
+ self._tot_offset = bottom + height
+
+ art = None
+ if 'ring_shape' not in el or el['ring_shape'] in ['R','r']:
+
+ art = mpatches.Rectangle( (theta,bottom),
+ width = width,
+ height = height,
+ alpha = el['ring_alpha'],
+ color = el['ring_color'],
+ linewidth = 0.0, #linewidth = el['ring_edge_width'],
+ #ec = el['ring_edge_color'] if el['ring_edge_color'] else el['ring_color']
+ )
+ if el['ring_edge_width'] > 0.0:
+ arb = mpatches.Rectangle( (theta,bottom),
+ width = width,
+ height = height,
+ #alpha = 0.0, # el['ring_alpha'],
+ color = 'none', #el['ring_color'],
+ linewidth = el['ring_edge_width'],
+ ec = el['ring_edge_color'] if el['ring_edge_color'] else el['ring_color'],
+ zorder = 15,
+ )
+ self._ext_patches.append( arb )
+ elif el['ring_shape'] in ['v','V']:
+ art = mpatches.Polygon([ [theta,bottom + height],
+ [theta+width/2.0,bottom],
+ [theta+width,bottom + height] ],
+ alpha = el['ring_alpha'],
+ color = el['ring_color'],
+ linewidth = 0.0, #el['ring_edge_width'],
+ #ec = el['ring_edge_color'] if el['ring_edge_color'] else el['ring_color']
+ )
+ if el['ring_edge_width'] > 0.0:
+ arb = mpatches.Polygon([ [theta,bottom + height],
+ [theta+width/2.0,bottom],
+ [theta+width,bottom + height] ],
+ color = 'none', #el['ring_color'],
+ linewidth = el['ring_edge_width'],
+ ec = el['ring_edge_color'] if el['ring_edge_color'] else el['ring_color'],
+ zorder = 15,
+ )
+ self._ext_patches.append( arb )
+ elif el['ring_shape'] in ['^']:
+ art = mpatches.Polygon([ [theta,bottom],
+ [theta+width/2.0,bottom+height],
+ [theta+width,bottom ] ],
+ alpha = el['ring_alpha'],
+ color = el['ring_color'],
+ linewidth = 0.0, #el['ring_edge_width'],
+ #ec = el['ring_edge_color'] if el['ring_edge_color'] else el['ring_color']
+ )
+ if el['ring_edge_width'] > 0.0:
+ arb = mpatches.Polygon([ [theta,bottom + height],
+ [theta+width/2.0,bottom],
+ [theta+width,bottom + height] ],
+ color = 'none', #el['ring_color'],
+ linewidth = el['ring_edge_width'],
+ ec = el['ring_edge_color'] if el['ring_edge_color'] else el['ring_color'],
+ zorder = 15,
+ )
+ self._ext_patches.append( arb )
+ if art:
+ self._ext_patches.append( art )
+ for c in clade.clades:
+ rec_set_exts(c)
+
+ rec_set_exts( self.tree.root )
+
+
+ def load_set_attr(self):
+ gprops = dict([(p.id_ref,p.value)
+ for p in self.tree.properties if not p.id_ref.startswith("ext__") ])
+
+
+ eggrops = [( int(p.id_ref.split('__')[1]),p.id_ref.split('__')[2], p.value)
+ for p in self.tree.properties if p.id_ref.startswith("ext__")]
+ iggrops = [( float(p.id_ref.split('__')[1]),p.id_ref.split('__')[2], p.value)
+ for p in self.tree.properties if p.id_ref.startswith("int__")]
+
+ for att,typ,default in clade_attr:
+ val = typ( gprops[att] ) if att in gprops else default
+ setattr( self, "default_"+att, val )
+
+ self.ext_levs = {}
+ for l,k,v in eggrops:
+ if not l in self.ext_levs:
+ self.ext_levs[l] = {}
+ self.ext_levs[l][k] = v
+ self.int_levs = {}
+ for l,k,v in iggrops:
+ if not l in self.int_levs:
+ self.int_levs[l] = {}
+ self.int_levs[l][k] = v
+ for k,v in self.ext_levs.items():
+ for att,typ,default in ext_attr:
+ if att in v:
+ self.ext_levs[k][att] = typ(self.ext_levs[k][att])
+ else:
+ self.ext_levs[k][att] = default
+
+ for att,typ,default in global_graphical_attr:
+ val = typ( gprops[att] ) if att in gprops else default
+ setattr( self, att, val )
+
+ for att,typ,default in branch_attr:
+ val = typ( gprops[att] ) if att in gprops else default
+ setattr( self, att, val )
+
+ for att,typ,default in structural_attr:
+ val = typ( gprops[att] ) if att in gprops else default
+ setattr( self, att, val )
+
+ for att,typ,default in leg_attr:
+ val = gprops["leg_"+att] if "leg_"+att in gprops and gprops["leg_"+att] != '.' else ""
+ val = [typ(v) if v != '.' else default for v in val.split(leg_sep)] if val else []
+ setattr( self, "leg_"+att, val )
+
+ self._ext_max_height = {}
+ if 'ring_height' in gprops:
+ for i,v in gprops['ring_height'].items():
+ self._ext_max_height[i] = float(v) if float(v) >= 0.0 else 0.0
+ for lev,attr,val in eggrops:
+ if attr == 'ring_height':
+ self._ext_max_height[int(lev)] = float(val) if float(val) >= 0.0 else 0.0
+
+
+ self._n_terminals = self.tree.count_terminals()
+ # with few leaves, the total rotation is lowered (unless the user set it)
+ if self._n_terminals < 16 and 'total_plotted_degrees' not in gprops:
+ self.total_plotted_degrees = self._n_terminals * 10.0
+ self.total_plotted_degrees = self.total_plotted_degrees * rpi / 180.0
+ self.start_rotation = self.start_rotation * rpi / 180.0
+
+ def set_branches( self ):
+ def set_branches_rec( clade, fcol ):
+ if clade == self.tree.root:
+ sbl, sb, rsb, redf = 1.0, 1.0, 0.0, 1.0
+ else:
+ sbl = self.branch_bracket_depth
+ sb,rsb = sbl,1-sbl
+ redf = 1.0-self.branch_bracket_width
+ rads = [c.theta for c in clade.clades]
+ min_rads,max_rads = rads[0],rads[-1]
+ if min_rads > max_rads:
+ max_rads += rpi2
+ mid = ( max_rads + min_rads ) * 0.5
+ red,nred = (redf,1-redf) # if abs(max_rads - min_rads) < math.pi else (1.0,0.0)
+ midr = mid*nred
+ minr, maxr = min_rads*red, max_rads*red
+ rads_l = list(arange( minr+midr, maxr+midr,0.05)) + [maxr+midr]
+
+ if hasattr(clade,'clade_marker_color') and self.branch_color_from_ancestor:
+ fcol = clade.clade_marker_color
+
+ cl0 = min([c for c in clade.clades],key=lambda x:x.r)
+ blc = np.array( [np.array( [c, sb*clade.r+rsb*cl0.r] ) for c in rads_l] )
+ self._branches.append( blc )
+ self._br_colors.append( fcol )
+
+ corr = 0.0 if clade.theta >= min_rads else rpi2
+ blc = np.array( [ np.array( [(clade.theta+corr)*red+midr, sb*clade.r+rsb*cl0.r]),
+ np.array( [clade.theta, clade.r])] )
+ self._branches.append( blc )
+ self._br_colors.append( fcol )
+
+ for c in clade.clades:
+ corr = 0.0 if c.theta >= min_rads else rpi2
+ blc = np.array( [ np.array( [(c.theta+corr)*red+midr, sb*clade.r+rsb*cl0.r] ),
+ np.array( [c.theta, c.r] ) ] )
+ self._branches.append( blc )
+ self._br_colors.append( fcol )
+ for c in clade.clades:
+ if not c.is_terminal():
+ set_branches_rec( c, fcol )
+
+ set_branches_rec( self.tree.root, self.branch_color )
+
+ def set_wings( self ):
+ if not self._wing_levs:
+ self._wing_tot_offset = 1.0 # self._max_depth
+ self._tot_offset = 1.0
+ return
+ if self.ignore_branch_len:
+ self._wing_levs.sort(reverse=True)
+ nlevs = len( self._wing_levs )
+ minl, maxl = min(self._wing_levs),max(self._wing_levs)
+ lthetas = [l.theta for l in self.tree.get_terminals()]
+ rad_offset = self.annotation_background_separation
+ lev_width = self.annotation_background_width
+
+ def set_wings_rec( clade ):
+ if hasattr( clade, 'annotation') and not hasattr( clade, 'annotation_background_color'):
+ if self.warnings:
+ sys.stderr.write("Warning: label "
+ "\""+clade.annotation+"\" has "
+ "a default gray background because no color is found for "
+ "the corresponding \"annotation\"\n")
+ clade.annotation_background_color = [0.3,0.3,0.3]
+ if hasattr( clade, 'annotation_background_color'):
+ if clade.is_terminal(): # same as non-terminal ??
+ cpc = clade.theta + (clade.theta-clade.nc.theta) if clade.pc is None else clade.pc.theta
+ cnc = clade.theta - (clade.pc.theta-clade.theta) if clade.nc is None else clade.nc.theta
+ if cpc > clade.theta:
+ cpc -= rpi2
+ if cnc < clade.theta:
+ cnc += rpi2
+ lsm = ( clade.theta + cpc ) * 0.5
+ lgr = ( clade.theta + cnc ) * 0.5
+
+ else:
+ f,t = clade.fc.theta, clade.fc.pc.theta if clade.fc.pc else clade.fc.nc.theta
+ cpc = min(abs(f-t),abs(f+rpi2-t),abs(t+rpi2-f))
+ f,t = clade.lc.theta, clade.lc.nc.theta if clade.lc.nc else clade.lc.pc.theta
+ cnc = min(abs(f-t),abs(f+rpi2-t),abs(t+rpi2-f))
+
+ lsm = clade.fc.theta - cpc * 0.5
+ lgr = clade.lc.theta + cnc * 0.5
+
+ self._wing_thetas.append( lsm )
+ if self.ignore_branch_len:
+ rad = 1.0 + lev_width * ( 1 + self._wing_levs.index(int(self._depths[clade.name])) ) - clade.r
+ else:
+ rad = (1.0 - clade.r) + lev_width
+ self._wing_radii.append( rad + rad_offset )
+ width = abs( lgr - lsm)
+ self._wing_widths.append( width )
+ self._wing_bottoms.append( clade.r )
+ self._wing_colors.append( clade.annotation_background_color )
+ if clade.r + rad + rad_offset > self._wing_tot_offset:
+ self._wing_tot_offset = clade.r + rad + rad_offset
+ self._tot_offset = self._wing_tot_offset
+
+ if hasattr( clade, 'annotation') and clade.annotation:
+ lab, ext_key = clade.annotation, None
+ if lab.count(":"):
+ ext_key, lab = lab, lab.split(":")[0]
+ self._label.append( lab )
+ if ext_key:
+ self._ext_key.append( ext_key )
+ avgtheta = (lgr + lsm)*0.5
+ self._label_theta.append( avgtheta )
+
+ rot90 = hasattr( clade, 'annotation_rotation') and clade.annotation_rotation
+ fract = 0.05 if rot90 else 0.5
+ if self.ignore_branch_len:
+ rad = 1.0 + lev_width * ( 1 + self._wing_levs.index(int(self._depths[clade.name])) ) - lev_width * fract
+ else:
+ rad = 1.0 + lev_width * fract
+
+ self._label_r.append( rad + rad_offset )
+ rot = avgtheta * 180.0 / rpi + 90.0 if rpi < clade.theta%rpi2 < rpi2 else avgtheta * 180.0 / rpi - 90.0
+ rot = (rot + 360.0) % 360.0 + 1e-10
+ rot = -rot if rot90 else rot
+ self._label_rot.append( rot )
+ lfs = clade.annotation_font_size if hasattr(clade,"annotation_font_size") else self.default_annotation_font_size
+ self._annotation_font_size.append( lfs )
+ lfs = clade.annotation_font_stretch if hasattr(clade,"annotation_font_stretch") else self.default_annotation_font_stretch
+ self._annotation_font_stretch.append( lfs )
+
+ for c in clade.clades:
+ set_wings_rec( c )
+
+ set_wings_rec( self.tree.root )
+
+ def disambiguate_names(self):
+ def disambiguate_names_rec( clade, cnames = set() ):
+ if not hasattr(clade,'name'):
+ clade.name = "noname_" + str(len(cnames))
+ elif clade.name in cnames:
+ clade.name = str(clade.name) + "_" + str(len(cnames))
+ cnames.add( clade.name )
+
+ for c in clade.clades:
+ disambiguate_names_rec( c, cnames )
+ disambiguate_names_rec( self.tree.root )
+
+
+ def get_legend( self ):
+ ax1 = plt.subplot(111, visible=False)
+
+ keys = getattr( self, "leg_keys")
+
+ clade_marker_color = getattr( self, "leg_clade_marker_color")
+ if not clade_marker_color:
+ clade_marker_color = [self.default_clade_marker_color] * len(keys)
+ clade_marker_size = getattr( self, "leg_clade_marker_size")
+ if not clade_marker_size:
+ clade_marker_size = [self.default_clade_marker_size] * len(keys)
+ clade_marker_edge_width = getattr( self, "leg_clade_marker_edge_width")
+ if not clade_marker_edge_width:
+ clade_marker_edge_width = [self.default_clade_marker_edge_width] * len(keys)
+
+ ll = []
+ for s,c,lw in zip(clade_marker_size,clade_marker_color,clade_marker_edge_width):
+ l = ax1.scatter( 0.0, 0.0, s = s, c = c,
+ linewidths = lw )
+ ll.append(l)
+ ax1.set_xlim((0,1))
+ ax1.set_ylim((0,1))
+
+ return ll , keys, 'upper right'
+
+ def _init_attr( self ):
+ self._depths = dict([(c.name,dist) for c,dist in
+ self.tree.depths(self.ignore_branch_len).items()])
+ self._max_depth = max(self._depths.values())
+ if not self._max_depth:
+ self._max_depth = 1.0
+ self._r, self._t = arr.array('f'), arr.array('f')
+ for att,typ,default in clade_attr:
+ setattr( self, att, [] )
+ self._rl, self._tl = arr.array('f'), arr.array('f')
+ self._branches = []
+ self._br_colors = []
+
+ self._wing_levs = []
+ self._wing_thetas = arr.array('f')
+ self._wing_radii = arr.array('f')
+ self._wing_widths = arr.array('f')
+ self._wing_bottoms = arr.array('f')
+ self._wing_colors = []
+ self._wing_alphas = arr.array('f')
+
+ self._label = []
+ self._ext_key = []
+ self._label_r = arr.array('f')
+ self._label_theta = arr.array('f')
+ self._label_rot = arr.array('f')
+ self._annotation_font_size = []
+ self._annotation_font_stretch = []
+
+ self._tot_offset = 1.0
+ self._wing_tot_offset = 1.0
+
+ self._ext_patches = []
+ self._ext_lines = []
+
+ def draw( self, out_img, out_format = None, out_dpi = 72, out_size = 7.0, out_pad = 0.5, external_legends = False ):
+
+ self.reorder_tree()
+ #self.tree.ladderize()
+
+ self.load_set_attr()
+
+ self.disambiguate_names()
+
+ self._init_attr()
+
+ self.set_clade_data()
+ self.set_branches()
+ self.set_wings()
+ self.set_exts()
+
+ size = out_size * self._tot_offset
+ fig = plt.figure(figsize=(size,size))
+
+ handles, labels, loc = self.get_legend()
+
+ ax = fig.add_subplot( 111, polar=True, frame_on=False )
+ xticks([])
+ yticks([])
+
+
+ if len(self._t) > 0 and len(self._r) > 0:
+ ax.scatter( self._t, self._r,
+ marker = self.default_clade_marker_shape,
+ c = self.default_clade_marker_color,
+ edgecolor = self.default_clade_marker_edge_color,
+ lw = self.default_clade_marker_edge_width,
+ s = self.default_clade_marker_size,
+ zorder=12)
+ #for x,y,l in zip(self._t,self._r,self.clade_marker_label):
+ # ax.text( x, y, "A", va = 'center', ha = 'center' )
+
+ if self._tl:
+ mrkrs = set(self.clade_marker_shape)
+ # this needs to be greatly optimized
+ for m in mrkrs:
+ ax.scatter( [t for i,t in enumerate(self._tl) if self.clade_marker_shape[i] == m],
+ [t for i,t in enumerate(self._rl) if self.clade_marker_shape[i] == m],
+ marker = m, #self.clade_marker_shape,
+ c = [t for i,t in enumerate(self.clade_marker_color) if self.clade_marker_shape[i] == m],
+ edgecolor = [t for i,t in enumerate(self.clade_marker_edge_color) if self.clade_marker_shape[i] == m],
+ lw = [t for i,t in enumerate(self.clade_marker_edge_width) if self.clade_marker_shape[i] == m],
+ s = [t for i,t in enumerate(self.clade_marker_size) if self.clade_marker_shape[i] == m],
+ zorder=12)
+ for x,y,l,s,c in zip(self._tl,self._rl,self.clade_marker_label,self.clade_marker_font_size,self.clade_marker_font_color):
+ ax.text( x, y, l, va = 'center', ha = 'center', fontstretch = 30, fontsize = s, zorder = 35, color = c )
+ bcoll = collections.LineCollection( self._branches,
+ color=self._br_colors,
+ linewidth= self.branch_thickness )
+
+
+ if len( self._wing_thetas ) < 2:
+ self._wing_thetas.append(0)
+ self._wing_radii.append(0)
+ self._wing_widths.append(0)
+ self._wing_bottoms.append(0)
+ wbar = ax.bar( self._wing_thetas, self._wing_radii,
+ width = self._wing_widths,
+ bottom = self._wing_bottoms,
+ alpha = self.annotation_background_alpha,
+ color = self._wing_colors,
+ edgecolor = self._wing_colors,
+ )
+
+ for lev,d in self.int_levs.items():
+ if 'internal_label' in d:
+ start_rot = ( self.internal_labels_rotation
+ if self.internal_labels_rotation
+ else self.start_rotation )
+ self._label_r.append( 1.0/self._max_depth*lev )
+ self._label_theta.append( start_rot*rpi/180.0 )
+ self._label.append( d['internal_label'] )
+ rot = start_rot+90 if 180.0 < start_rot%360.0 < 360.0 else start_rot-90
+ rot = (rot + 360.0) % 360.0
+ self._label_rot.append( rot )
+ self._annotation_font_size.append( d['internal_label_font_size']
+ if 'internal_label_font_size' in d
+ else int_attr_d['internal_label_font_size'][1] )
+ self._annotation_font_stretch.append( 100 )
+
+ for x,y,s,r,f,fs in zip( self._label_r, self._label_theta,
+ self._label, self._label_rot,
+ self._annotation_font_size,
+ self._annotation_font_stretch ):
+ if r < 0.0:
+ r = -r
+ r %= 360.0
+ y2 = y/rpi*180.0%360.0
+ if 0 < y2 <= 90:
+ ax.text( y, x, s, rotation = r+90,
+ ha="left", va="bottom",
+ fontsize = f,
+ fontstretch = fs,
+ zorder = 30 )
+ if 90 < y2 <= 180:
+ ax.text( y, x, s, rotation = r-90,
+ ha="right", va="bottom",
+ fontsize = f,
+ fontstretch = fs,
+ zorder = 30 )
+ if 180 < y2 <= 270:
+ ax.text( y, x, s, rotation = r+90,
+ ha="right", va="top",
+ fontsize = f,
+ fontstretch = fs,
+ zorder = 30 )
+ if 270 < y2 <= 360 or y2 == 0.0:
+ ax.text( y, x, s, rotation = r-90,
+ ha="left", va="top",
+ fontsize = f,
+ fontstretch = fs,
+ zorder = 30 )
+ else:
+ ax.text( y, x, s, rotation = r,
+ ha="center", va="center",
+ fontsize = f,
+ fontstretch = fs,
+ zorder = 30 )
+ for e in sorted(self._ext_key):
+ ax.scatter( 0.0, 0.0, s = 0.0, label = e)
+ ax.add_collection(bcoll)
+
+ for p in self._ext_patches:
+ ax.add_patch(p)
+ #for l in self._ext_lines:
+ # ax.add_line(l)
+
+ offset = self._wing_tot_offset + self.annotation_background_offset
+ for l,v in self.ext_levs.items():
+ for p in ['ring_internal_separator_thickness','ring_external_separator_thickness']:
+ if p in v and float(v[p]) > 0.0:
+ bot = offset + self._ext_bottoms[l]
+ if p == 'ring_external_separator_thickness':
+ bot += self._ext_max_height[l]*0.1 if l in self._ext_max_height else 0.1
+
+ lw = float(v[p])
+ col = v['ring_separator_color']
+ line = lines.Line2D( linearized_circle, [bot]*len(linearized_circle), linewidth = lw, color = col )
+ ax.add_line(line)
+ if 'ring_label' in v and v['ring_label']:
+ bot = offset + self._ext_bottoms[l]
+ bot1 = offset + ( self._ext_bottoms[l+1] if l+1 in self._ext_bottoms else self._ext_bottoms[l] +
+ (self._ext_max_height[l]*0.1 if l in self._ext_max_height else 0.1) )
+ off = (rpi2-self.total_plotted_degrees)*0.5
+ b = (bot+bot1)*0.5
+ s = -90 if 0.5*rpi < self.start_rotation < 1.5*rpi else 90
+ #rot = (self.start_rotation*360.0/rpi2 + s + off*360.0/rpi2 )%360.0
+ rot = (self.start_rotation*360.0/rpi2 + s )%360.0
+ fs = v['ring_label_font_size']
+ lcol = v['ring_label_color']
+ ax.text( self.start_rotation, b, v['ring_label'], rotation = rot,
+ ha="center", va="center", fontsize = fs, color = lcol )
+
+
+ if hasattr(self,"title"):
+ ax.set_title(self.title,fontdict = {'size':self.title_font_size})
+
+ #a,b = ax.get_ylim()
+ ylim((0.0,self._tot_offset*1.075))
+
+ #ax.legend( frameon = False, markerscale = 0 )
+ #for t in self._ext_key:
+ #ax.text( 0, 1, t )
+
+ if self._ext_key:
+ #a = ax.legend( bbox_to_anchor=(.0, 1), loc = 'upper left', shadow=False, frameon = False,
+ # scatterpoints = 1, borderpad = 0, handlelength = 0,
+ # handletextpad = 0, markerscale = 0.0, ncol = 1,
+ # labelspacing = 0.05,
+ # prop = {'size':self.annotation_legend_font_size}
+ # )
+
+ if external_legends:
+ if self._ext_key:
+ lengths = [len(s) for s in self._ext_key]
+ charsize = self.annotation_legend_font_size * 0.0138889
+ width = round(max(lengths) * charsize * 10.) / 10.
+ height = round(self._tot_offset * len(self._ext_key) * charsize * 10.) / 10.
+ fig_annot = plt.figure(figsize=(width, height))
+ ax = fig_annot.add_subplot(111, frame_on=False, xticks=[], yticks=[])
+ else:
+ print '[W] External annotation not created, no annotated labels!'
+
+ ll = [ax.scatter(0.0, 0.0, s=0.0)] * len(self._ext_key)
+
+ if self._ext_key:
+ plt.figlegend(ll, sorted(self._ext_key), 'upper left', frameon=False,
+ shadow=False, scatterpoints=1, handlelength=0, markerscale=0.0,
+ handletextpad=0.2, ncol=1, labelspacing=0.1,
+ prop={'size': self.annotation_legend_font_size})
+
+ if external_legends: # add '_annot' to the filename
+ if out_format:
+ img_name = out_img + "_annot"
+ else:
+ img_name = out_img[:out_img.rfind('.')] + "_annot" + out_img[out_img.rfind('.'):]
+
+ if self._ext_key:
+ plt.savefig(img_name, dpi=out_dpi, bbox_inches='tight',
+ bbox_extra_artists=handles, pad_inches=out_pad, format=out_format)
+ plt.close()
+
+ if external_legends:
+ if labels: # need to check if there are annotated labels!
+ charsize = self.class_legend_font_size * 0.0148889
+ width = round(max([len(s) for s in labels]) * charsize * self.class_legend_marker_size * 10.) / 10.
+ height = round(self._tot_offset * len(labels) * charsize * self.class_legend_marker_size * 10.) / 10.
+ plt.figure(figsize=(width, height))
+ else:
+ print '[W] External legend not created, no annotated labels!'
+
+ if labels:
+ plt.figlegend(handles, labels, loc, labelspacing=0.1, frameon=False,
+ markerscale=self.class_legend_marker_size, scatterpoints=1,
+ handletextpad=0.2, prop={'size': self.class_legend_font_size})
+
+ if external_legends: # add '_legend' to the filename
+ if out_format:
+ img_name = out_img + "_legend"
+ else:
+ img_name = out_img[:out_img.rfind('.')] + "_legend" + out_img[out_img.rfind('.'):]
+
+ if labels:
+ plt.savefig(img_name, dpi=out_dpi, pad_inches=out_pad,
+ bbox_extra_artists=handles, format=out_format)
+ plt.close()
+
+ if True: #
+ plt.savefig(out_img, dpi=out_dpi,
+ # facecolor=fc,
+ bbox_inches='tight', bbox_extra_artists=handles,
+ pad_inches=out_pad, format=out_format,
+ # edgecolor=fc
+ )
+
+ plt.close()
+ else:
+ plt.show()
diff --git a/src/pyphlan.py b/src/pyphlan.py
new file mode 100644
index 0000000..3912097
--- /dev/null
+++ b/src/pyphlan.py
@@ -0,0 +1,729 @@
+from Bio import Phylo
+from Bio.Phylo import PhyloXML
+from Bio.Phylo import PhyloXMLIO
+from collections import defaultdict as ddict
+from Bio.Phylo.PhyloXML import Property as Prop
+from Bio.Phylo.PhyloXML import Clade as PClade
+from Bio.Phylo.BaseTree import Tree as BTree
+from Bio.Phylo.BaseTree import Clade as BClade
+import string
+from numpy import pi as rpi
+rpi2 = 2.0*rpi
+import numpy as np
+import array as arr
+import collections as colls
+import sys
+#core_test = lambda ok,tot,pr: 1.0-st.binom.sf(ok,tot,pr)
+
+lev_sep = "."
+
+# Here are three functions that I'd love to see in Biopython but they
+# are not there (yet).
+def partial_branch_length(clade, selective_targets):
+ def _partial_branch_length_( clade, selective_targets ):
+ if clade.is_terminal() and clade.name in selective_targets:
+ return [clade.branch_length]
+ if not any([c.name in selective_targets for c in clade.get_terminals()]):
+ return [0.0]
+ ret = [0.0]
+ for c in clade.clades:
+ ret += [partial_branch_length( c, selective_targets)]
+ ret += [clade.branch_length]
+ return ret
+ return sum( _partial_branch_length_( clade,selective_targets ) )
+
+def reroot(tree, new_root):
+ outgroup = new_root
+ outgroup_path = tree.get_path(outgroup)
+ if len(outgroup_path) == 0:
+ # Outgroup is the current root -- no change
+ return
+ prev_blen = outgroup.branch_length
+ if outgroup.is_terminal():
+ # Create a new root with a 0-length branch to the outgroup
+ outgroup.branch_length = 0.0
+ new_root = tree.root.__class__(
+ branch_length=tree.root.branch_length, clades=[outgroup])
+ # The first branch reversal (see the upcoming loop) is modified
+ if len(outgroup_path) == 1:
+ # Trivial tree like '(A,B);
+ new_parent = new_root
+ else:
+ parent = outgroup_path.pop(-2)
+ parent.clades.pop(parent.clades.index(outgroup))
+ prev_blen, parent.branch_length = parent.branch_length, prev_blen
+ new_root.clades.insert(0, parent)
+ new_parent = parent
+ else:
+ # Use the given outgroup node as the new (trifurcating) root
+ new_root = outgroup
+ new_root.branch_length = tree.root.branch_length
+ new_parent = new_root
+
+ # Tracing the outgroup lineage backwards, reattach the subclades under a
+ # new root clade. Reverse the branches directly above the outgroup in
+ # the tree, but keep the descendants of those clades as they are.
+ for parent in outgroup_path[-2::-1]:
+ parent.clades.pop(parent.clades.index(new_parent))
+ prev_blen, parent.branch_length = parent.branch_length, prev_blen
+ new_parent.clades.insert(0, parent)
+ new_parent = parent
+
+ # Finally, handle the original root according to number of descendents
+ old_root = tree.root
+ if outgroup in old_root.clades:
+ assert len(outgroup_path) == 1
+ old_root.clades.pop(old_root.clades.index(outgroup))
+ else:
+ old_root.clades.pop(old_root.clades.index(new_parent))
+ if len(old_root) == 1:
+ # Delete the old bifurcating root & add branch lengths
+ ingroup = old_root.clades[0]
+ if ingroup.branch_length:
+ ingroup.branch_length += prev_blen
+ else:
+ ingroup.branch_length = prev_blen
+ new_parent.clades.insert(0, ingroup)
+ # ENH: If annotations are attached to old_root, do... something.
+ else:
+ # Keep the old trifurcating/polytomous root as an internal node
+ old_root.branch_length = prev_blen
+ new_parent.clades.insert(0, old_root)
+
+ tree.root = new_root
+ tree.rooted = True
+ return
+
+def get_parent(tree, child_clade):
+ node_path = tree.get_path(child_clade)
+ return node_path[-2] if len(node_path) > 1 else None
+
+def reroot_mid_fat_edge( tree, node ):
+ if tree.root == node:
+ return
+ fat = get_parent( tree, node )
+ bl = node.branch_length
+ node.branch_length = bl*0.5
+ new_clade = PClade(branch_length=bl*0.5, clades = [node])
+ if fat:
+ fat.clades = [c for c in fat.clades if c != node] + [new_clade]
+ reroot( tree, new_clade )
+ else:
+ tree.root.clades = [new_clade] + [c for c in tree.root.clades if c != node]
+ reroot( tree, new_clade)
+
+def clades2terms( tree, startswith = None ):
+ c2t = {}
+ def clades2terms_rec( c ):
+ if startswith:
+ if c.name and c.name.startswith( startswith ):
+ c2t[c] = c.get_terminals()
+ else:
+ c2t[c] = c.get_terminals()
+ for cc in c.clades:
+ clades2terms_rec(cc)
+ clades2terms_rec( tree.root )
+ return c2t
+
+def dist_matrix( tree ):
+ terminals = list(tree.get_terminals())
+ term_names = [t.name for t in terminals]
+ # can be made faster with recursion
+ for n in tree.get_nonterminals():
+ n.ids = set( [nn.name for nn in n.get_terminals()] )
+
+ dists = dict([(n,dict([(nn,0.0) for nn in term_names])) for n in term_names])
+
+ def dist_matrix_rec( clade ):
+ bl = clade.branch_length
+ if clade.is_terminal():
+ for t in term_names:
+ if t!=clade.name:
+ dists[clade.name][t] += bl
+ dists[t][clade.name] += bl
+ return
+ for t1 in clade.ids:
+ for t2 in terminals:
+ if t2.name not in clade.ids:
+ dists[t1][t2.name] += bl
+ dists[t2.name][t1] += bl
+ for c in clade.clades:
+ dist_matrix_rec( c )
+
+ dist_matrix_rec( tree.root )
+ return dists
+
+
+
+class PpaTree:
+
+ def __load_tree_txt__( self, fn ):
+ tree = Phylo.BaseTree.Tree()
+ try:
+ rows = [l.decode('utf-8').rstrip().split("\t")[0] for l in
+ open(fn, 'rb')]
+ except IOError:
+ raise IOError()
+
+ clades = [r.split(lev_sep) for r in rows]
+
+ tree = BTree()
+ tree.root = BClade()
+
+ def add_clade_rec( father, txt_tree ):
+ fl = set([t[0] for t in txt_tree])
+ father.clades = []
+ for c in fl:
+ nclade = BClade( branch_length = 1.0,
+ name = c )
+ father.clades.append( nclade )
+ children = [t[1:] for t in txt_tree if len(t)>1 and t[0] == c]
+ if children:
+ add_clade_rec( nclade, children )
+
+ add_clade_rec( tree.root, clades )
+ self.ignore_branch_len = 1
+ return tree.as_phyloxml()
+
+
+ def __read_tree__( self, fn ):
+ for ff in ['phyloxml','newick','nexus',"txt"]:
+ try:
+ if ff in ['txt']:
+ tree = self.__load_tree_txt__( fn )
+ else:
+ tree = Phylo.read(fn, ff)
+ if len(tree.root.get_terminals()) == 1:
+ raise ValueError
+ except ValueError:
+ continue
+ except IOError:
+ sys.stderr.write("Error: No tree file found: "+fn+"\n")
+ raise IOError
+ except Exception:
+ continue
+ else:
+ return tree.as_phyloxml()
+ sys.stderr.write("Error: unrecognized input format "+fn+"\n")
+ raise ValueError
+
+
+ def __init__( self, filename, warnings = False ):
+ self.warnings = warnings
+ if filename is None:
+ self.tree = None
+ return
+ try:
+ self.tree = self.__read_tree__(filename)
+ self.add_full_paths()
+ except:
+ sys.exit(0)
+
+
+ def core_test( self, ok, tot, pr ):
+ # scipy included here for non-compatibility with scons
+ import scipy.stats as st
+ if pr in self.ctc and tot in self.ctc[pr] and ok in self.ctc[pr][tot]:
+ return self.ctc[pr][tot][ok]
+ ret = 1.0-st.binom.sf(ok,tot,pr)
+ if not pr in self.ctc: self.ctc[pr] = {}
+ if not tot in self.ctc[pr]: self.ctc[pr][tot] = {}
+ if not ok in self.ctc[pr][tot]: self.ctc[pr][tot][ok] = ret
+ return ret
+
+ def is_core( self, clade, targs, er = 0.95 ):
+ intersection = clade.imgids & targs
+
+ len_intersection = len(intersection)
+
+ if len(clade.imgids) >= 2 and len_intersection < 2:
+ return False, 0.0, None
+
+ add = 0
+ for subclade in clade.clades:
+ if "?" in subclade.name:
+ out = subclade.imgids - intersection # targs
+ add += len(out)
+ if add and len_intersection >= add:
+ len_intersection += int(round(add/1.99))
+
+ core = self.core_test( len_intersection, clade.nterminals, er )
+ if core < 0.05 or len_intersection == 0:
+ return False, core, None
+ nsubclades, nsubclades_absent = 0, 0
+ for subclade in set(clade.get_nonterminals()) - set([clade]):
+ if "?" in subclade.full_name: # full??/
+ continue
+ if subclade.nterminals == 1:
+ nsubclades += 1 # !!!
+ if len(subclade.imgids & targs) == 0:
+ nsubclades_absent += 1
+ continue
+
+ sc_intersection = subclade.imgids & targs
+ sc_len_intersection = len(sc_intersection)
+
+ sc_add = 0
+ for sc_subclade in subclade.clades:
+ if "?" in sc_subclade.name:
+ sc_out = sc_subclade.imgids - sc_intersection
+ sc_add += len(sc_out)
+ if add and sc_len_intersection >= sc_add:
+ sc_len_intersection += int(round(sc_add/1.99))
+
+ subcore = self.core_test( sc_len_intersection, subclade.nterminals, er )
+ if subcore < 0.05:
+ return False, core, None
+ if nsubclades > 0 and nsubclades == nsubclades_absent:
+ return False, core, None
+ return True, core, intersection
+
+ def _find_core( self, terminals, er = 0.95, root_name = None, skip_qm = True ):
+ #terminals_s = set(terminals)
+ def _find_core_rec( clade ):
+ if root_name:
+ #clname = lev_sep.join( [root_name]+clade.full_name.split(lev_sep)[1:] )
+ #clname = lev_sep.join( clade.full_name[1:] )
+ clname = clade.full_name
+ else:
+ clname = clade.full_name
+ if clade.is_terminal():
+ if clade.imgid in terminals:
+ #n = terminals[clade.imgid]
+ return [(clname,1,1,
+ #n,n,n,
+ 1.0)]
+ return []
+ if skip_qm and clade.name and "?" in clade.name:
+ return []
+ if len(clade.imgids) == 1:
+ cimg = list(clade.imgids)[0]
+ if cimg in terminals:
+ #n = terminals[cimg]
+ return [(clname,1,1,
+ #n,n,n,
+ 1.0)]
+ return []
+ core,pv,intersection = self.is_core( clade, terminals, er = er )
+ if core:
+ #ns = [terminals[ii] for ii in terminals_s if ii in clade.imgids]
+ return [( clname,
+ len(intersection),len(clade.imgids),
+ #len(clade.imgids&terminals_s),len(clade.imgids),
+ #min(ns),max(ns),np.mean(ns),
+ pv)]
+ rets = []
+ for c in clade.clades:
+ rets += _find_core_rec(c)
+ return rets
+ return _find_core_rec( self.tree.root )
+
+
+ def add_full_paths( self ):
+
+ def _add_full_paths_( clade, path ):
+ lpath = path + ([clade.name] if clade.name else [])
+ clade.full_name = ".".join( lpath )
+ for c in clade.clades:
+ _add_full_paths_( c, lpath )
+ _add_full_paths_( self.tree.root, [] )
+
+ def find_cores( self, cl_taxa_file, min_core_size = 1, error_rate = 0.95, subtree = None, skip_qm = True ):
+ if subtree:
+ self.subtree( 'name', subtree )
+ self.ctc = {}
+ imgids2terminals = {}
+ for t in self.tree.get_terminals():
+ t.imgid = int(t.name[3:] if "t__"in t.name else t.name)
+ t.nterminals = 1
+ imgids2terminals[t.imgid] = t
+
+ # can be made faster with recursion
+ for n in self.tree.get_nonterminals():
+ n.imgids = set( [nn.imgid for nn in n.get_terminals()] )
+ n.nterminals = len( n.imgids )
+
+ self.add_full_paths() # unnecessary
+
+ ret = {}
+ for vec in (l.strip().split('\t') for l in open(cl_taxa_file)):
+ sid = int(vec[0])
+ #tgts_l = [int(s) for s in vec[1:]]
+ #tgts = dict([(s,tgts_l.count(s)) for s in set(tgts_l)])
+ tgts = set([int(s) for s in vec[1:]])
+
+ if len(tgts) >= min_core_size:
+ subtree_name = lev_sep.join(subtree.split(lev_sep)[:-1] ) if subtree else None
+ ret[sid] = self._find_core( tgts, er = error_rate, root_name = subtree, skip_qm = skip_qm )
+ #print sid #, ret[sid]
+ return ret
+
+ def markerness( self, coreness, uniqueness, cn_min, cn_max, cn_avg ):
+ return coreness * uniqueness * (1.0 / float(cn_max-cn_min+1)) * 1.0 / cn_avg
+
+ def find_markers( self, cu_file, hitmap_file, core_file ):
+ self.ctc = {}
+ imgids2terminals = {}
+ ids2clades = {}
+ for t in self.tree.get_terminals():
+ t.imgid = int(t.name)
+ t.nterminals = 1
+ imgids2terminals[t.imgid] = t
+ ids2clades[t.name] = t
+
+ # can be made faster with recursion (but it is not a bottleneck)
+ for n in self.tree.get_nonterminals():
+ n.imgids = set( [nn.imgid for nn in n.get_terminals()] )
+ n.nterminals = len( n.imgids )
+
+ self.add_full_paths() # unnecessary
+
+ cus = dict([(int(l[0]),[int(ll) for ll in l[1:]]) for l in
+ (line.strip().split('\t') for line in open(cu_file))])
+ cinfo = dict([(int(v[0]),[v[1]] + [int(vv) for vv in v[2:6]] + [float(vv) for vv in v[6:]])
+ for v in (line.strip().split('\t') for line in open(core_file))])
+
+ ret = {}
+ for vec in (l.strip().split('\t') for l in open(hitmap_file)):
+ sid = int(vec[0])
+ tgts_l = set([int(s) for s in vec[1:]])
+ lca = self.lca( cus[sid], ids2clades )
+ if lca.is_terminal():
+ tin = set([lca.imgid])
+ tout = tgts_l - tin
+ else:
+ tout = tgts_l - lca.imgids
+ tin = lca.imgids & tgts_l
+ ci = cinfo[sid]
+ ltin = len(tin)
+ ltout = len(tout)
+ uniqueness = float(ltin)/float(ltin+ltout)
+ coreness = float( ci[-1] )
+ cn_min, cp_max, cn_avg = [float(f) for f in ci[-4:-1]]
+ gtax = ci[0]
+ cobs, ctot = int(ci[1]), int(ci[2])
+ markerness = self.markerness( coreness, uniqueness, cn_min, cp_max, cn_avg )
+
+ res_lin = [ gtax, markerness, coreness, uniqueness, cobs, ctot, cn_min, cp_max, cn_avg,
+ ltin, ltout, "|".join([str(s) for s in tin]), "|".join([str(s) for s in tout]) ]
+ ret[sid] = res_lin
+ return ret
+
+
+ def select_markers( self, marker_file, markerness_th = 0.0, max_markers = 200 ):
+ cl2markers = colls.defaultdict( list )
+ for line in (l.strip().split('\t') for l in open( marker_file )):
+ gid = line[1]
+ markerness = float(line[2])
+ if markerness < markerness_th:
+ continue
+ cl2markers[gid].append( line )
+ for k,v in cl2markers.items():
+ cl2markers[k] = sorted(v,key=lambda x:float(x[2]),reverse=True)[:max_markers]
+ return cl2markers.values()
+
+ def get_c2t( self ):
+ tc2t = {}
+
+ def _get_c2t_( clade ):
+ lterms = clade.get_terminals()
+ tc2t[clade] = set([l.name for l in lterms])
+ if clade.is_terminal():
+ return
+ for c in clade.clades:
+ _get_c2t_( c )
+ _get_c2t_( self.tree.root )
+ return tc2t
+
+ def ltcs( self, terminals, tc2t = None, terminals2clades = None, lca_precomputed = None ):
+ set_terminals = set( terminals )
+ lca = lca_precomputed if lca_precomputed else self.lca( terminals, terminals2clades )
+ def _ltcs_rec_( clade, cur_max ):
+ if clade.is_terminal() and clade.name in set_terminals:
+ return clade,1
+ terms = tc2t[clade] if tc2t else set([cc.name for cc in clade.get_terminals()])
+ if len(terms) < cur_max:
+ return None,0
+ if terms <= set_terminals:
+ return clade,len(terms)
+ rets = []
+ for c in clade.clades:
+ r,tmax = _ltcs_rec_( c, cur_max )
+ if tmax >= cur_max:
+ cur_max = tmax
+ if r:
+ rets.append((r,tmax))
+ if rets:
+ return sorted(rets,key=lambda x:x[1])[-1][0],cur_max
+ else:
+ return None,None
+ return _ltcs_rec_( lca, cur_max = 0 )[0]
+
+ def lca( self, terminals, terminals2clades = None ):
+ clade_targets = []
+ if terminals2clades:
+ clade_targets = [terminals2clades[str(t)] for t in terminals]
+ else:
+ clade_targets = [t for t in self.tree.get_terminals() if t.name in terminals]
+ """
+ for t in terminals:
+ ct = list(self.tree.find_clades( {"name": str(t)} ))
+ if len( ct ) > 1:
+ sys.stderr.write( "Error: non-unique target specified." )
+ sys.exit(-1)
+ clade_targets.append( ct[0] )
+ """
+ lca = self.tree.common_ancestor( clade_targets )
+ return lca
+
+
+ def lcca( self, t, t2c ):
+ node_path = list(self.tree.get_path(t))
+ if not node_path or len(node_path) < 2:
+ return None,None,None
+ tlevs = t2c[t].split(lev_sep)[2:-1]
+ for p in node_path[-15:]:
+ terms = list(p.get_terminals())
+ descn = [t2c[l.name].split(lev_sep)[2:-1] for l in terms if l.name!=t]
+ if not descn or len(descn) < 2:
+ continue
+
+ l = tlevs[-1]
+ descr_l = [d[-1] for d in descn]
+ if len(set(descr_l)) == 1 and descr_l[0] != l and \
+ l != "s__sp_" and not l.endswith("unclassified") and \
+ descr_l[0] != "s__sp_" and not descr_l[0].endswith("unclassified"):
+ return p,terms,lev_sep.join(tlevs)
+ return None,None,None
+
+
+ def tax_precision( self, c2t_f, strategy = 'lca' ):
+ c2t = self.read_tax_clades( c2t_f )
+ res = []
+ for c,terms in c2t.items():
+ lca = self.lca( terms )
+ num = partial_branch_length(lca,terms)
+ den = lca.total_branch_length()
+ prec = num / den
+ res.append([c,str(prec)])
+ return res
+
+ def tax_recall( self, c2t_f ):
+ c2t = self.read_tax_clades( c2t_f )
+ res = []
+ for c,terms in c2t.items():
+ lca = self.lca( terms )
+ ltcs = self.ltcs( terms )
+ lca_terms = set(lca.get_terminals())
+ ltcs_terms = set(ltcs.get_terminals())
+ out_terms = lca_terms - ltcs_terms
+ outs = [c]
+ if len(out_terms):
+ diam = sum(sorted(ltcs.depths().values())[-2:])
+ outs += [":".join([t.name,str( self.tree.distance(ltcs,t)/diam )])
+ for t in out_terms]
+ res.append( outs )
+ return res
+
+ def tax_resolution( self, terminals ):
+ pass
+
+
+ def prune( self, strategy = 'lca', n = None, fn = None, name = None, newname = None ):
+ prune = None
+ if strategy == 'root_name':
+ ct = list(self.tree.find_clades( {"name": name} ))
+ if len( ct ) > 1:
+ sys.stderr.write( "Error: non-unique target specified." )
+ sys.exit(-1)
+ prune = ct[0]
+ elif strategy == 'lca':
+ terms = self.read_targets( fn ) if isinstance(fn,str) else fn
+ prune = self.lca( terms )
+ elif strategy == 'ltcs':
+ terms = self.read_targets( fn ) if isinstance(fn,str) else fn
+ prune = self.ltcs( terms )
+ elif strategy == 'n_anc':
+ if n is None:
+ n = 1
+ ct = list(self.tree.find_clades( {"name": name} ))
+ if len( ct ) > 1:
+ sys.stderr.write( "Error: non-unique target specified.\n" )
+ sys.exit(-1)
+ node_path = list(self.tree.get_path(name))
+ if not node_path or len(node_path) < n:
+ sys.stderr.write( "Error: no anchestors or number of anchestors < n." )
+ sys.exit(-1)
+ toprune = node_path[-n]
+ fat = node_path[-n-1]
+ fat.clades = [cc for cc in fat.clades if cc != toprune]
+ prune = None
+ else:
+ sys.stderr.write( strategy + " not supported yet." )
+ sys.exit(-1)
+ if prune:
+ prune.clades = []
+ if newname:
+ prune.name = newname
+
+ def subtree( self, strategy, n = None, fn = None ):
+ newroot = None
+ if strategy == 'name':
+ ct = list(self.tree.find_clades( {"name": fn} ))
+ if len( ct ) != 1:
+ int_clades = self.tree.get_nonterminals()
+ for cl in int_clades:
+ if n == cl.full_name:
+ ct = [cl]
+ break
+ if not ct:
+ sys.stderr.write( "Error: target not found." )
+ sys.exit(-1)
+ newroot = ct[0]
+ elif strategy == 'lca':
+ terms = self.read_targets( fn ) if isinstance(fn,str) else fn
+ newroot = self.lca( terms )
+ elif strategy == 'ltcs':
+ terms = self.read_targets( fn ) if isinstance(fn,str) else fn
+ newroot = self.ltcs( terms )
+ if newroot:
+ self.tree.root = newroot
+
+ def rename( self, strategy, n = None, terms = None ):
+ newroot = None
+ if strategy == 'root_name':
+ ct = list(self.tree.find_clades( {"name": n} ))
+ if len( ct ) > 1:
+ sys.stderr.write( "Error: non-unique target specified.\n" )
+ sys.exit(-1)
+ newroot = ct[0]
+ elif strategy == 'lca':
+ newroot = self.lca( terms )
+ elif strategy == 'ltcs':
+ newroot = self.ltcs( terms )
+ if newroot:
+ newroot.name = n
+
+ def export( self, out_file ):
+ self.tree = self.tree.as_phyloxml()
+ Phylo.write( self.tree, out_file, "phyloxml")
+
+ def read_tax_clades( self, tf ):
+ with open( tf ) as inpf:
+ return dict([(ll[0],ll[1:]) for ll in [l.strip().split('\t') for l in inpf]])
+
+ def read_targets( self, tf ):
+ if tf.count(":"):
+ return tf.split(":")
+ with open( tf ) as inpf:
+ return [l.strip() for l in inpf]
+
+ def reroot( self, strategy = 'lca', tf = None, n = None ):
+ if strategy in [ 'lca', 'ltcs' ]:
+ targets = self.read_targets( tf )
+
+ lca = self.lca( targets ) if strategy == 'lca' else self.ltcs( targets )
+ reroot_mid_fat_edge( self.tree, lca)
+
+ #lca_f = get_parent( self.tree, lca )
+ #
+ #bl = lca.branch_length
+ #new_clade = PClade(branch_length=bl*0.5, clades = [lca])
+ #lca.branch_length = bl*0.5
+ #if lca_f:
+ # lca_f.clades = [c for c in lca_f.clades if c != lca] + [new_clade]
+ # reroot( self.tree, new_clade )
+ #else:
+ # self.tree.root = new_clade
+
+ elif strategy == 'midpoint':
+ pass
+ #self.tree.reroot_at_midpoint(update_splits=True)
+ elif strategy == 'longest_edge':
+ nodes = list(self.tree.get_nonterminals()) + list(self.tree.get_terminals())
+ longest = max( nodes, key=lambda x:x.branch_length )
+ reroot_mid_fat_edge( self.tree, longest )
+ #longest_edge = max( self.ntree.get_edge_set(),
+ # key=lambda x:x.length)
+ #self.tree.reroot_at_edge(longest_edge, update_splits=True)
+ elif strategy == 'longest_internal_edge':
+ nodes = list(self.tree.get_nonterminals())
+ longest = max( nodes, key=lambda x:x.branch_length )
+ if self.tree.root != longest:
+ reroot_mid_fat_edge( self.tree, longest )
+ #longest = get_lensorted_int_edges( self.tree )
+ #self.tree.reroot_at_edge( list(longest)[-1], update_splits=True )
+ elif strategy == 'longest_internal_edge_n':
+ nodes = list(self.tree.get_nonterminals())
+ longest = max( nodes, key=lambda x:x.branch_length
+ if len(x.get_terminals()) >= n else -1.0)
+ reroot_mid_fat_edge( self.tree, longest )
+ #longest = get_lensorted_int_edges( self.tree, n )
+ #self.tree.reroot_at_edge( list(longest)[-1], update_splits=True )
+
+
+ def reorder_tree( self ):
+ self._ord_terms = []
+ def reorder_tree_rec( clade ):
+ if clade.is_terminal():
+ self._ord_terms.append( clade )
+ return clade,clade
+ clade.clades.sort( key=lambda x:len(x.get_terminals()), reverse = True)
+ for c in clade.clades:
+ c.fc,c.lc = reorder_tree_rec( c )
+ return clade.clades[0].fc,clade.clades[-1].lc
+ #clade.fc, clade.lc = clade.clades[0], clade.clades[-1]
+
+ reorder_tree_rec( self.tree.root )
+ last = None # self._ord_terms[-1]
+ for c in self._ord_terms:
+ c.pc = last
+ if last:
+ last.nc = c
+ last = c
+ c.nc = None
+ #self._ord_terms[-1].nc = None # self._ord_terms[0]
+
+
+ def get_subtree_leaves( self, full_names = False ):
+
+ subtrees = []
+ def rec_subtree_leaves( clade ):
+ if not len(clade.clades):
+ return [clade.name]
+ leaves = []
+ for c in clade.clades:
+ leaves += rec_subtree_leaves( c )
+ leaves = [l for l in leaves if l]
+ subtrees.append( (clade.name if clade.name else "",leaves) )
+ return leaves
+
+ rec_subtree_leaves( self.tree.root )
+ return subtrees
+
+ def get_clade_names( self, full_names = False, leaves = True, internals = True ):
+ clades = []
+ if leaves:
+ clades += self.tree.get_terminals()
+ if internals:
+ clades += self.tree.get_nonterminals()
+ if full_names:
+ def rec_name( clade, nam = "" ):
+ ret = []
+ if not nam and not clade.name:
+ lnam = ""
+ elif not nam:
+ lnam = clade.name
+ elif not clade.name:
+ lnam = nam
+ else:
+ lnam = lev_sep.join( [nam, clade.name if clade.name else ""] )
+ ret += [lnam] if lnam else []
+ for c in clade.clades:
+ ret += rec_name(c,lnam)
+ return ret
+ names = set(rec_name(self.tree.root))
+ else:
+ names = set([c.name for c in clades])
+ return sorted(names)
+
--
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