[med-svn] [Git][med-team/subread][master] 5 commits: New upstream version 1.6.5+dfsg

[Steffen Möller]

Steffen Möller pushed to branch master at Debian Med / subread


Commits:
881338dd by Steffen Moeller at 2019-08-09T14:20:29Z
New upstream version 1.6.5+dfsg
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43a82d31 by Steffen Moeller at 2019-08-09T14:21:21Z
Update upstream source from tag 'upstream/1.6.5+dfsg'

Update to upstream version '1.6.5+dfsg'
with Debian dir 163e2f8bf2fb01959e7edcd16cf1f679f9668b62
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c48dfa1f by Steffen Moeller at 2019-08-09T14:21:21Z
New upstream version

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54ce3e9a by Steffen Moeller at 2019-08-09T14:21:24Z
Standards-Version: 4.4.0

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6e4319b0 by Steffen Moeller at 2019-08-09T14:23:18Z
Manual post-processing of routine update.

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30 changed files:

- debian/changelog
- debian/control
- debian/patches/arch_specific_flags.patch
- doc/SubreadUsersGuide.tex
- src/HelperFunctions.c
- src/HelperFunctions.h
- src/Makefile.Linux
- src/SNPCalling.c
- src/core-indel.c
- src/core-junction.c
- src/core-junction.h
- src/core.c
- src/core.h
- src/coverage_calc.c
- src/flattenAnnotations.c
- src/fullscan.c
- src/gen_rand_reads.c
- src/gene-algorithms.c
- src/gene-algorithms.h
- src/gene-value-index.c
- src/gene-value-index.h
- src/global-reassembly.c
- src/hashtable.c
- src/index-builder.c
- + src/input-blc.c
- + src/input-blc.h
- src/input-files.c
- src/input-files.h
- src/makefile.version
- src/mergeVCF.c


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/subread/compare/ef5abf9696c8b6aa049204b325eb1524693656f3...6e4319b05d99d9c8fd1c506ef6b2ce2517a60631

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View it on GitLab: https://salsa.debian.org/med-team/subread/compare/ef5abf9696c8b6aa049204b325eb1524693656f3...6e4319b05d99d9c8fd1c506ef6b2ce2517a60631
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