[med-svn] [Git][med-team/mira][master] 7 commits: update homepage URL

[Michael R. Crusoe]

Michael R. Crusoe pushed to branch master at Debian Med / mira


Commits:
f1c0778d by Michael R. Crusoe at 2019-02-18T08:30:18Z
update homepage URL

- - - - -
442690a0 by Michael R. Crusoe at 2019-02-18T08:32:00Z
Mark mira-doc as Multi-Arch: foreign

- - - - -
c162cb46 by Michael R. Crusoe at 2019-02-18T08:44:59Z
Secure URI in copyright format; Standards-Version: 4.3.0

- - - - -
087de19d by Michael R. Crusoe at 2019-02-18T08:45:30Z
Respect DEB_BUILD_OPTIONS in override_dh_auto_test target

- - - - -
dde3e4cc by Michael R. Crusoe at 2019-02-18T08:45:32Z
Remove trailing whitespace in debian/changelog

- - - - -
359c17b9 by Michael R. Crusoe at 2019-02-18T08:45:32Z
Remove trailing whitespace in debian/control

- - - - -
b10f26fe by Michael R. Crusoe at 2019-02-18T08:45:32Z
Remove trailing whitespace in debian/copyright

- - - - -


4 changed files:

- debian/changelog
- debian/control
- debian/copyright
- debian/rules


Changes:

=====================================
debian/changelog
=====================================
@@ -1,7 +1,18 @@
 mira (4.9.6-5) UNRELEASED; urgency=medium
 
+  [ Andreas Tille ]
   * Remove unneeded get-orig-source target
 
+  [ Michael R. Crusoe ]
+  * Update homepage URL
+  * Mark mira-doc as Multi-Arch: foreign
+  * Secure URI in copyright format
+  * Standards-Version: 4.3.0; no changes needed
+  * Respect DEB_BUILD_OPTIONS in override_dh_auto_test target
+  * Remove trailing whitespace in debian/changelog
+  * Remove trailing whitespace in debian/control
+  * Remove trailing whitespace in debian/copyright
+
  -- Andreas Tille <tille at debian.org>  Wed, 19 Sep 2018 22:41:27 +0200
 
 mira (4.9.6-4) unstable; urgency=medium
@@ -21,7 +32,7 @@ mira (4.9.6-4) unstable; urgency=medium
 mira (4.9.6-3) unstable; urgency=medium
 
   * Team upload.
-  
+
   [ Nadiya Sitdykova ]
   * Add autopkgtest test-suite for denovo, mapping and est assembly
 
@@ -111,7 +122,7 @@ mira (4.0.2-1) unstable; urgency=low
 mira (4.0-1) unstable; urgency=low
 
   [ Thorsten Alteholz ]
-  * New upstream version 
+  * New upstream version
   * debian/rules: add boost dir in auto_configure (Closes: #735798)
 
   [ Andreas Tille ]
@@ -151,7 +162,7 @@ mira (3.9.17-1) unstable; urgency=low
   * Add boost-minimal patch, to add boost-libraries in final linking,
     fixing FTBFS (Closes: #701322)
   * Enable parallel builds, to speed up compilation.
-  
+
   [ Andreas Tille ]
   * delete debian/README.source which is outdated / wrong
   * debian/*.1: Wrote / reviewed manpages for all installed programs


=====================================
debian/control
=====================================
@@ -25,10 +25,10 @@ Build-Depends: debhelper (>= 11~),
                libboost-iostreams-dev
 Build-Depends-Indep: docbook-xsl,
                      dblatex
-Standards-Version: 4.2.1
+Standards-Version: 4.3.0
 Vcs-Browser: https://salsa.debian.org/med-team/mira
 Vcs-Git: https://salsa.debian.org/med-team/mira.git
-Homepage: http://chevreux.org/projects_mira.html
+Homepage: https://sourceforge.net/p/mira-assembler/wiki/Home/
 
 Package: mira-assembler
 Architecture: any
@@ -51,7 +51,7 @@ Description: Whole Genome Shotgun and EST Sequence Assembler
  sources for oligo design in clinical microarray experiments.
  .
  The package provides the following executables:
- Binaries provided: 
+ Binaries provided:
   * mira: for assembly of genome sequences
   * miramem: estimating memory needed to assemble projects.
   * mirabait: a "grep" like tool to select reads with kmers up to 256 bases.
@@ -73,6 +73,7 @@ Description: extract of RFAM 12 rRNA database
 
 Package: mira-doc
 Architecture: all
+Multi-Arch: foreign
 Section: doc
 Depends: ${misc:Depends}
 Suggests: mira-assembler


=====================================
debian/copyright
=====================================
@@ -1,4 +1,4 @@
-Format: http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
+Format: https://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
 Upstream-Contact: Bastien Chevreux <bach at chevreux.org>
 Source: http://jaist.dl.sourceforge.net/project/mira-assembler/MIRA/V3rc2/mira-3rc2.tar.bz2
 
@@ -6,7 +6,7 @@ Files: *
 Copyright: © 1997-2000 for MIRA V1.x and EdIt: Bastien Chevreux, Thomas Pfisterer, Deutsches Krebsforschungszentrum Heidelberg -- Dept. of Molecula Biophysics.
            © 2001-2013 for MIRA V2.x: Bastien Chevreux <bach at chevreux.org>
 License: GPL-2+
-Comment: 
+Comment:
  Author of MIRA
  .
   Bastien Chevreux, formerly at the German Cancer Research Center (Deutsches


=====================================
debian/rules
=====================================
@@ -23,9 +23,14 @@ override_dh_auto_install-indep:
 	    doc/docbook/doccss doc/docbook/DefinitiveGuideToMIRA.html || true
 
 override_dh_auto_test-arch:
+ifeq (,$(filter nocheck,$(DEB_BUILD_OPTIONS)))
 	make check
+endif
 
 override_dh_auto_test-indep:
+ifeq (,$(filter nocheck,$(DEB_BUILD_OPTIONS)))
+	echo no tests for -indep
+endif
 
 override_dh_auto_build-arch:
 	# some *.cc files are created by old flex version which breaks the build



View it on GitLab: https://salsa.debian.org/med-team/mira/compare/bd57345c43498604d6074d13249715b8a7e0b4fe...b10f26feb902d659c2d1c5b8e59e79bca24f4759

-- 
View it on GitLab: https://salsa.debian.org/med-team/mira/compare/bd57345c43498604d6074d13249715b8a7e0b4fe...b10f26feb902d659c2d1c5b8e59e79bca24f4759
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