Andreas Tille pushed to branch master at Debian Med / community / helper-scripts
Commits:
ed9e81af by Andreas Tille at 2021-04-16T13:42:21+00:00
automatic update
- - - - -
2 changed files:
- debian-med-tests.txt
- outdated_med-packages.txt
Changes:
=====================================
debian-med-tests.txt
=====================================
@@ -1,68 +1,70 @@
-Last-Update: Fri, 16 Apr 2021 01:42:03 +0000
+Last-Update: Fri, 16 Apr 2021 13:42:04 +0000
Source | Vote | Tasks | Tags
-------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------
- dcmtk | 198 | {covid-19,imaging} |
- orthanc | 94 | {covid-19,practice,imaging} |
- orthanc-wsi | 46 | {laboratory,imaging,his,oncology,covid-19,practice} |
+ dcmtk | 199 | {covid-19,imaging} |
+ orthanc | 97 | {covid-19,practice,imaging} |
+ orthanc-wsi | 48 | {laboratory,imaging,his,oncology,covid-19,practice} |
gdcm | 45 | {imaging-dev} |
- openslide | 38 | {imaging} |
- amide | 36 | {imaging} |
- dicom3tools | 31 | {imaging} |
+ openslide | 39 | {imaging} |
+ amide | 38 | {imaging} |
+ dicom3tools | 33 | {imaging} |
nipype | 30 | {imaging,imaging-dev} |
- dcm2niix | 24 | {imaging} |
- htsjdk | 24 | {bio-dev} |
- dicomscope | 20 | {imaging} |
- gdcm | 20 | {covid-19,imaging} |
+ htsjdk | 25 | {bio-dev} |
+ dcm2niix | 23 | {imaging} |
+ dicomscope | 23 | {imaging} |
+ gdcm | 21 | {covid-19,imaging} |
odin | 20 | {imaging-dev,imaging} |
- minc-tools | 16 | {imaging} |
- nifticlib | 16 | {imaging} |
+ minc-tools | 17 | {imaging} |
+ nifticlib | 17 | {imaging} |
+ gdcm | 15 | {imaging-dev} |
gnumed-server | 15 | {practice,covid-19} |
- gdcm | 14 | {imaging-dev} |
+ invesalius | 14 | {imaging} |
+ dicomnifti | 13 | {imaging} |
+ mia | 13 | {imaging} |
pixelmed | 13 | {imaging} |
- dicomnifti | 12 | {imaging} |
- invesalius | 12 | {imaging} |
- mia | 12 | {imaging} |
+ vtk-dicom | 13 | {imaging} |
orthanc-webviewer | 12 | {imaging} |
- vtk-dicom | 12 | {imaging} |
insighttoolkit4 | 11 | {imaging-dev} |
adun.app | 10 | {bio} |
- plastimatch | 9 | {imaging} |
+ ngs-sdk | 10 | {bio-dev} |
+ plastimatch | 10 | {imaging} |
+ nifti2dicom | 9 | {imaging} |
ngs-sdk | 8 | {bio-dev} |
nifti2dicom | 8 | {imaging} |
- ngs-sdk | 7 | {bio-dev} |
- nifti2dicom | 7 | {imaging} |
- libminc | 6 | {imaging-dev} |
+ libminc | 7 | {imaging-dev} |
+ dicompyler | 6 | {oncology} |
+ king | 6 | {imaging,typesetting} |
+ lagan | 6 | {bio} |
melting | 6 | {cloud,bio} |
ngs-sdk | 6 | {bio-dev} |
salmid | 6 | {bio} |
treeview | 6 | {bio,bio-phylogeny} |
biomaj3-cli | 5 | {cloud} |
- dicompyler | 5 | {oncology} |
- king | 5 | {imaging,typesetting} |
- lagan | 5 | {bio} |
obitools | 5 | {bio} |
- openslide | 5 | {imaging-dev} |
bamkit | 4 | {covid-19,bio} |
- ea-utils | 4 | {bio} |
jebl2 | 4 | {bio-dev} |
librg-utils-perl | 4 | {bio} |
nifticlib | 4 | {imaging-dev} |
+ openslide | 4 | {imaging-dev} |
orthanc-dicomweb | 4 | {covid-19,imaging} |
orthanc-mysql | 4 | {imaging} |
bart-view | 3 | {imaging} |
bitseq | 3 | {bio} |
busco | 3 | {covid-19,bio} |
+ ea-utils | 3 | {bio} |
elastix | 3 | {imaging} |
embassy-domainatrix | 3 | {bio,cloud} |
getdata | 3 | {bio} |
lamarc | 3 | {bio} |
libdivsufsort | 3 | {bio-dev} |
libncl | 3 | {bio} |
+ libsbml | 3 | {bio-dev} |
orthanc-postgresql | 3 | {imaging} |
phast | 3 | {bio} |
pymia | 3 | {imaging-dev} |
salmon | 3 | {bio,covid-19} |
+ staden | 3 | {bio} |
tracetuner | 3 | {bio} |
beast-mcmc | 2 | {bio-phylogeny,bio} |
biojava-live | 2 | {bio-dev} |
@@ -76,15 +78,16 @@ Last-Update: Fri, 16 Apr 2021 01:42:03 +0000
intake | 2 | {bio-dev,bio} |
jellyfish1 | 2 | {bio} |
libctapimkt | 2 | {practice} |
- libsbml | 2 | {bio-dev} |
+ opencfu | 2 | {laboratory} |
+ papyrus | 2 | {imaging-dev} |
plasmidid | 2 | {covid-19,bio} |
python-wdlparse | 2 | {bio-dev} |
rambo-k | 2 | {bio} |
+ samtools-legacy | 2 | {bio-dev} |
sift | 2 | {bio} |
sight | 2 | {imaging} |
simpleitk | 2 | {imaging-dev} |
spread-phy | 2 | {bio,bio-phylogeny} |
- staden | 2 | {bio} |
vienna-rna | 2 | {bio,covid-19} |
acedb | 1 | {bio,cloud} |
anfo | 1 | {bio,cloud} |
@@ -93,18 +96,20 @@ Last-Update: Fri, 16 Apr 2021 01:42:03 +0000
bbmap | 1 | {covid-19,bio} |
cat-bat | 1 | {covid-19,bio} |
clonalorigin | 1 | {bio} |
+ ctn | 1 | {imaging-dev} |
cufflinks | 1 | {cloud,bio} |
+ eegdev | 1 | {imaging-dev} |
estscan | 1 | {bio} |
gatb-core | 1 | {bio} |
gifticlib | 1 | {imaging-dev} |
libchado-perl | 1 | {bio-dev} |
+ libdisorder | 1 | {bio-dev} |
+ libpal-java | 1 | {bio-dev} |
libvistaio | 1 | {imaging-dev} |
logol | 1 | {bio} |
microbegps | 1 | {bio} |
- opencfu | 1 | {laboratory} |
orthanc-gdcm | 1 | {imaging} |
oscar | 1 | {data,practice,tools} |
- papyrus | 1 | {imaging-dev} |
pbdagcon | 1 | {bio} |
perm | 1 | {bio,cloud} |
phyutility | 1 | {cloud,bio} |
@@ -116,7 +121,6 @@ Last-Update: Fri, 16 Apr 2021 01:42:03 +0000
saint | 1 | {bio} |
sambamba | 1 | {bio} |
samblaster | 1 | {bio,covid-19} |
- samtools-legacy | 1 | {bio-dev} |
segemehl | 1 | {bio} |
sibsim4 | 1 | {cloud,bio} |
simrisc | 1 | {oncology} |
@@ -124,6 +128,7 @@ Last-Update: Fri, 16 Apr 2021 01:42:03 +0000
sprai | 1 | {bio} |
stacks | 1 | {bio} |
tvc | 1 | {bio} |
+ vtk-dicom | 1 | {imaging-dev} |
yaha | 1 | {bio} |
zalign | 1 | {bio,cloud} |
atropos | 0 | {bio} |
@@ -136,10 +141,8 @@ Last-Update: Fri, 16 Apr 2021 01:42:03 +0000
camp | 0 | {imaging-dev} |
canu | 0 | {bio} |
clonalframeml | 0 | {covid-19,bio} |
- ctn | 0 | {imaging-dev} |
delly | 0 | {covid-19,bio} |
dextractor | 0 | {bio,covid-19} |
- eegdev | 0 | {imaging-dev} |
emboss-explorer | 0 | {bio} |
emmax | 0 | {bio} |
fastml | 0 | {bio} |
@@ -162,7 +165,6 @@ Last-Update: Fri, 16 Apr 2021 01:42:03 +0000
libbpp-raa | 0 | {bio-dev} |
libbpp-seq | 0 | {bio-dev} |
libbpp-seq-omics | 0 | {bio-dev} |
- libdisorder | 0 | {bio-dev} |
libgenome | 0 | {bio-dev} |
libgkarrays | 0 | {bio-dev} |
libhmsbeagle | 0 | {bio-dev} |
@@ -173,7 +175,6 @@ Last-Update: Fri, 16 Apr 2021 01:42:03 +0000
libmialm | 0 | {imaging-dev} |
libmuscle | 0 | {bio-dev} |
libncl | 0 | {bio-dev} |
- libpal-java | 0 | {bio-dev} |
libpsortb | 0 | {bio-dev} |
libqes | 0 | {bio-dev} |
librdp-taxonomy-tree-java | 0 | {bio-dev} |
@@ -208,8 +209,8 @@ Last-Update: Fri, 16 Apr 2021 01:42:03 +0000
pscan-chip | 0 | {bio} |
python-bcbio-gff | 0 | {bio-dev} |
python-epimodels | 0 | {epi} |
- python-seqcluster | 0 | {bio-dev,covid-19} |
python-seqcluster | 0 | {bio} |
+ python-seqcluster | 0 | {bio-dev,covid-19} |
rdp-alignment | 0 | {bio} |
rdp-classifier | 0 | {bio} |
resfinder-db | 0 | {bio} |
@@ -233,7 +234,6 @@ Last-Update: Fri, 16 Apr 2021 01:42:03 +0000
trace2dbest | 0 | {bio} |
varna | 0 | {bio} |
varscan | 0 | {covid-19,bio} |
- vtk-dicom | 0 | {imaging-dev} |
xdffileio | 0 | {imaging-dev} |
yanagiba | 0 | {bio,covid-19} |
mssstest | -1 | {tools} |
=====================================
outdated_med-packages.txt
=====================================
The diff for this file was not included because it is too large.
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/ed9e81afd51e467f27b9c433ebda9aa146138c06
--
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/ed9e81afd51e467f27b9c433ebda9aa146138c06
You're receiving this email because of your account on salsa.debian.org.
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://alioth-lists.debian.net/pipermail/debian-med-commit/attachments/20210416/d50c2a1f/attachment-0001.htm>