[med-svn] [Git][med-team/community/helper-scripts][master] automatic update

Andreas Tille (@tille) gitlab at salsa.debian.org
Thu Jul 1 14:42:25 BST 2021



Andreas Tille pushed to branch master at Debian Med / community / helper-scripts


Commits:
c38632af by Andreas Tille at 2021-07-01T13:42:21+00:00
automatic update

- - - - -


2 changed files:

- debian-med-tests.txt
- outdated_med-packages.txt


Changes:

=====================================
debian-med-tests.txt
=====================================
@@ -1,19 +1,19 @@
-Last-Update: Thu, 01 Jul 2021 01:42:04 +0000
+Last-Update: Thu, 01 Jul 2021 13:42:03 +0000
 
  Source                        | Vote   |     Tasks                                           |                                 Tags                                 
 -------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------
- dcmtk                         |    171 | {covid-19,imaging}                                  | 
- orthanc                       |     91 | {imaging,covid-19,practice}                         | 
- orthanc-wsi                   |     49 | {oncology,laboratory,imaging,covid-19,his,practice} | 
+ dcmtk                         |    178 | {covid-19,imaging}                                  | 
+ orthanc                       |     94 | {imaging,covid-19,practice}                         | 
+ orthanc-wsi                   |     51 | {oncology,laboratory,imaging,covid-19,his,practice} | 
  gdcm                          |     37 | {imaging-dev}                                       | 
  amide                         |     27 | {imaging}                                           | 
  htsjdk                        |     27 | {bio-dev}                                           | 
  dicom3tools                   |     23 | {imaging}                                           | 
  openslide                     |     23 | {imaging}                                           | 
- dicomscope                    |     20 | {imaging}                                           | 
+ dicomscope                    |     21 | {imaging}                                           | 
  dcm2niix                      |     19 | {imaging}                                           | 
- odin                          |     17 | {imaging,imaging-dev}                               | 
  ngs-sdk                       |     16 | {bio-dev}                                           | 
+ odin                          |     16 | {imaging,imaging-dev}                               | 
  gdcm                          |     15 | {covid-19,imaging}                                  | 
  orthanc-webviewer             |     15 | {imaging}                                           | 
  insighttoolkit4               |     13 | {imaging-dev}                                       | 
@@ -25,15 +25,16 @@ Last-Update: Thu, 01 Jul 2021 01:42:04 +0000
  nifticlib                     |     11 | {imaging}                                           | 
  pixelmed                      |     10 | {imaging}                                           | 
  gdcm                          |      8 | {imaging-dev}                                       | 
- ngs-sdk                       |      8 | {bio-dev}                                           | 
+ ngs-sdk                       |      7 | {bio-dev}                                           | 
+ openslide                     |      7 | {imaging-dev}                                       | 
  busco                         |      6 | {bio,covid-19}                                      | 
  libminc                       |      6 | {imaging-dev}                                       | 
  ngs-sdk                       |      6 | {bio-dev}                                           | 
  nifti2dicom                   |      6 | {imaging}                                           | 
- openslide                     |      6 | {imaging-dev}                                       | 
  orthanc-dicomweb              |      6 | {covid-19,imaging}                                  | 
  plastimatch                   |      6 | {imaging}                                           | 
  salmid                        |      6 | {bio}                                               | 
+ ea-utils                      |      5 | {bio}                                               | 
  jebl2                         |      5 | {bio-dev}                                           | 
  libdivsufsort                 |      5 | {bio-dev}                                           | 
  librg-utils-perl              |      5 | {bio}                                               | 
@@ -44,7 +45,6 @@ Last-Update: Thu, 01 Jul 2021 01:42:04 +0000
  sight                         |      5 | {imaging}                                           | 
  biojava-live                  |      4 | {bio-dev}                                           | 
  dicompyler                    |      4 | {oncology}                                          | 
- ea-utils                      |      4 | {bio}                                               | 
  king                          |      4 | {typesetting,imaging}                               | 
  lagan                         |      4 | {bio}                                               | 
  nipype                        |      4 | {imaging-dev,imaging}                               | 
@@ -69,6 +69,7 @@ Last-Update: Thu, 01 Jul 2021 01:42:04 +0000
  oscar                         |      3 | {tools,data,practice}                               | 
  saint                         |      3 | {bio}                                               | 
  spread-phy                    |      3 | {bio,bio-phylogeny}                                 | 
+ stacks                        |      3 | {bio}                                               | 
  tracetuner                    |      3 | {bio}                                               | 
  anfo                          |      2 | {bio,cloud}                                         | 
  arden                         |      2 | {bio,cloud}                                         | 
@@ -100,12 +101,13 @@ Last-Update: Thu, 01 Jul 2021 01:42:04 +0000
  sibsim4                       |      2 | {bio,cloud}                                         | 
  sift                          |      2 | {bio}                                               | 
  spaced                        |      2 | {bio}                                               | 
- stacks                        |      2 | {bio}                                               | 
+ staden                        |      2 | {bio}                                               | 
  tvc                           |      2 | {bio}                                               | 
  yaha                          |      2 | {bio}                                               | 
  zalign                        |      2 | {cloud,bio}                                         | 
  cat-bat                       |      1 | {bio,covid-19}                                      | 
  clonalframeml                 |      1 | {covid-19,bio}                                      | 
+ cufflinks                     |      1 | {bio,cloud}                                         | 
  delly                         |      1 | {bio,covid-19}                                      | 
  ecopcr                        |      1 | {bio}                                               | 
  fastml                        |      1 | {bio}                                               | 
@@ -142,7 +144,6 @@ Last-Update: Thu, 01 Jul 2021 01:42:04 +0000
  soapaligner                   |      1 | {bio}                                               | 
  soapsnp                       |      1 | {bio}                                               | 
  sprai                         |      1 | {bio}                                               | 
- staden                        |      1 | {bio}                                               | 
  suitename                     |      1 | {bio}                                               | 
  surankco                      |      1 | {bio}                                               | 
  acedb                         |      0 | {cloud,bio}                                         | 
@@ -155,7 +156,6 @@ Last-Update: Thu, 01 Jul 2021 01:42:04 +0000
  bustools                      |      0 | {bio,covid-19}                                      | 
  camp                          |      0 | {imaging-dev}                                       | 
  ctn                           |      0 | {imaging-dev}                                       | 
- cufflinks                     |      0 | {bio,cloud}                                         | 
  dextractor                    |      0 | {covid-19,bio}                                      | 
  eegdev                        |      0 | {imaging-dev}                                       | 
  emmax                         |      0 | {bio}                                               | 


=====================================
outdated_med-packages.txt
=====================================
The diff for this file was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/c38632af3b10e73459ca71af5d0ca20de624011c

-- 
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/c38632af3b10e73459ca71af5d0ca20de624011c
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