[med-svn] [Git][med-team/bppsuite][upstream] New upstream version 3.0.0

[Andreas Tille (@tille)]

Andreas Tille pushed to branch upstream at Debian Med / bppsuite


Commits:
fa3d914d by Andreas Tille at 2021-10-18T15:37:45+02:00
New upstream version 3.0.0
- - - - -


30 changed files:

- + .gitignore
- CMakeLists.txt
- Examples/MaximumLikelihood/Codons/BranchModel/ML.bpp
- Examples/MaximumLikelihood/Codons/CladeModel/ML.bpp
- + Examples/MaximumLikelihood/Codons/CladeModel/Mixed/ML.bpp
- + Examples/MaximumLikelihood/Codons/CladeModel/Mixed/MixedLik.bpp
- + Examples/MaximumLikelihood/Codons/M0/Ancestor.bpp
- Examples/MaximumLikelihood/Codons/M0/ML.bpp
- + Examples/MaximumLikelihood/Codons/M1/Ancestor.bpp
- Examples/MaximumLikelihood/Codons/M1/ML.bpp
- + Examples/MaximumLikelihood/Codons/M1/MixedLik.bpp
- + Examples/MaximumLikelihood/Codons/M2/Ancestor.bpp
- Examples/MaximumLikelihood/Codons/M2/ML.bpp
- + Examples/MaximumLikelihood/Codons/MultiData/multidata.bpp
- + Examples/MaximumLikelihood/Codons/MultiData/trees.newick
- Examples/MaximumLikelihood/Nucleotides/Homogeneous/Ancestor.bpp
- Examples/MaximumLikelihood/Nucleotides/Homogeneous/ML.bpp
- + Examples/MaximumLikelihood/Nucleotides/Homogeneous/SeqGen.bpp
- Examples/MaximumLikelihood/Nucleotides/NonHomogeneousGG/MLNHGG.bpp
- Examples/MaximumLikelihood/Nucleotides/NonHomogeneousGeneral/Ancestor.bpp
- Examples/MaximumLikelihood/Nucleotides/NonHomogeneousGeneral/MLNH.bpp
- Examples/MaximumLikelihood/Proteins/Homogeneous/ML.bpp
- + Examples/MaximumLikelihood/Proteins/Mixed/ML.bpp
- + Examples/MaximumLikelihood/Proteins/Mixed/MixedLik.bpp
- Examples/SequenceSimulation/Homogeneous/SeqGen.bpp
- Examples/SequenceSimulation/HomogeneousCovarion/SeqGen.bpp
- + Examples/SequenceSimulation/Mixture/SeqGen.bpp
- + Examples/SequenceSimulation/MultiModel/AutoCorr.bpp
- + Examples/SequenceSimulation/MultiModel/Partition.bpp
- Examples/SequenceSimulation/NonHomogeneous/SeqGen.bpp


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/bppsuite/-/commit/fa3d914d7af8f5dd149a200f840843043b33c815

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View it on GitLab: https://salsa.debian.org/med-team/bppsuite/-/commit/fa3d914d7af8f5dd149a200f840843043b33c815
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