[med-svn] [Git][med-team/python-skbio][master] Cosmetics and closing 991981

[Steffen Möller (@moeller)]

Steffen Möller pushed to branch master at Debian Med / python-skbio


Commits:
4039bfd8 by Steffen Moeller at 2021-09-06T17:52:42+02:00
Cosmetics and closing 991981

- - - - -


5 changed files:

- debian/changelog
- debian/control
- debian/rules
- debian/upstream/metadata
- debian/watch


Changes:

=====================================
debian/changelog
=====================================
@@ -1,3 +1,15 @@
+python-skbio (0.5.6-5) UNRELEASED; urgency=medium
+
+  * Team upload.
+  * d/u/metadata: Added refs to registries
+  * Standards-Version: 4.6.0
+  * d/rules:
+    - Not installing /usr/lib/python3/dist-packages/benchmarks/
+      (Closes: #991981)
+    - Improved cleaning to allow repeated builds
+
+ -- Steffen Moeller <moeller at debian.org>  Mon, 06 Sep 2021 17:27:49 +0200
+
 python-skbio (0.5.6-4) unstable; urgency=medium
 
   * Team upload.


=====================================
debian/control
=====================================
@@ -32,7 +32,7 @@ Build-Depends-Indep: python3-sphinx <!nodoc>,
                      python-scipy-doc <!nodoc>,
                      python-biom-format-doc <!nodoc>,
                      python-pandas-doc <!nodoc>
-Standards-Version: 4.5.1
+Standards-Version: 4.6.0
 Vcs-Browser: https://salsa.debian.org/med-team/python-skbio
 Vcs-Git: https://salsa.debian.org/med-team/python-skbio.git
 Homepage: https://github.com/biocore/scikit-bio


=====================================
debian/rules
=====================================
@@ -28,12 +28,22 @@ ifeq (,$(filter nocheck,$(DEB_BUILD_OPTIONS)))
 	echo No testing for the -doc package
 endif
 
+override_dh_python3:
+	dh_python3
+	rm -r debian/python3-skbio/usr/lib/python3/dist-packages/benchmarks
+
 override_dh_auto_clean:
 	if [ "`find . -name "*.pyo"`" = "" ] ; then echo no need to clean up ; else dh_auto_clean; fi
 
 override_dh_clean:
 	dh_clean
 	find ./skbio -name '*.so' -delete
+	find ./skbio -name '*.o' -delete
+	rm -rf doc/build build doc/source/generated
+	find doc -name *.doctree -delete
+	rm -rf .pybuild
+	rm -f scikit_bio.egg-info/PKG-INFO scikit_bio.egg-info/SOURCES.txt scikit_bio.egg-info/dependency_links.txt scikit_bio.egg-info/requires.txt scikit_bio.egg-info/top_level.txt
+
 
 override_dh_sphinxdoc:
 ifeq (,$(findstring nodoc,$(DEB_BUILD_OPTIONS) $(DEB_BUILD_PROFILES)))


=====================================
debian/upstream/metadata
=====================================
@@ -1,4 +1,19 @@
+---
 Bug-Submit: https://github.com/biocore/scikit-bio/issues/new
 Repository: https://github.com/biocore/scikit-bio.git
 Repository-Browse: https://github.com/biocore/scikit-bio
 Bug-Database: https://github.com/biocore/scikit-bio/issues
+Registry:
+ - Name: conda:bioconda
+   Entry: scikit-bio
+ - Name: conda:conda-forge
+   Entry: scikit-bio
+ - Name: guix
+   Entry: NA
+   Checked: 2021-09-06
+ - Name: SciCrunch
+   Entry: NA
+   Checked: 2021-09-06
+ - Name: bio.tools
+   Entry: NA
+   Checked: 2021-09-06


=====================================
debian/watch
=====================================
@@ -1,2 +1,2 @@
 version=4
-https://github.com/biocore/scikit-bio/releases .*/scikit-bio/archive/([.0-9]+)\.tar\.gz
+https://github.com/biocore/scikit-bio/releases .*/([.0-9]+)\.tar\.gz



View it on GitLab: https://salsa.debian.org/med-team/python-skbio/-/commit/4039bfd85f5f7805f1b3ad1fe6a5ea67dd98ed86

-- 
View it on GitLab: https://salsa.debian.org/med-team/python-skbio/-/commit/4039bfd85f5f7805f1b3ad1fe6a5ea67dd98ed86
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