[med-svn] [Git][med-team/spoa][master] [ci skip] Update packaged lib patch

[Nilesh Patra (@nilesh)]

Nilesh Patra pushed to branch master at Debian Med / spoa


Commits:
af4560c0 by Nilesh Patra at 2022-11-29T19:46:20+00:00
[ci skip] Update packaged lib patch

- - - - -


1 changed file:

- debian/patches/use_debian_packaged_libs.patch


Changes:

=====================================
debian/patches/use_debian_packaged_libs.patch
=====================================
@@ -4,20 +4,66 @@ Description: Use Debian packaged libraries
 Forwarded: not-needed
 --- a/CMakeLists.txt
 +++ b/CMakeLists.txt
-@@ -265,7 +265,8 @@ if (spoa_build_exe)
+@@ -124,43 +124,6 @@
+   endif ()
+ endif ()
+ 
+-if (spoa_build_exe OR spoa_build_tests)
+-  find_package(bioparser 3.0.13 QUIET)
+-  find_package(biosoup 0.10.0 QUIET)
+-
+-  if (NOT bioparser_FOUND)
+-    FetchContent_Declare(
+-      bioparser
+-      GIT_REPOSITORY https://github.com/rvaser/bioparser
+-      GIT_TAG 3.0.13)
+-
+-    FetchContent_GetProperties(bioparser)
+-    if (NOT bioparser_POPULATED)
+-      FetchContent_Populate(bioparser)
+-      add_subdirectory(
+-        ${bioparser_SOURCE_DIR}
+-        ${bioparser_BINARY_DIR}
+-        EXCLUDE_FROM_ALL)
+-    endif ()
+-  endif ()
+-
+-  if (NOT biosoup_FOUND)
+-    FetchContent_Declare(
+-      biosoup
+-      GIT_REPOSITORY https://github.com/rvaser/biosoup
+-      GIT_TAG 0.10.0)
+-
+-    FetchContent_GetProperties(biosoup)
+-    if (NOT biosoup_POPULATED)
+-      FetchContent_Populate(biosoup)
+-      add_subdirectory(
+-        ${biosoup_SOURCE_DIR}
+-        ${biosoup_BINARY_DIR}
+-        EXCLUDE_FROM_ALL)
+-    endif ()
+-  endif ()
+-endif ()
+-
+ if (spoa_build_tests)
+   find_package(GTest 1.10.0 QUIET)
+   if (NOT GTest_FOUND)
+@@ -264,8 +227,7 @@
+ 
    target_link_libraries(spoa_exe
      spoa
-     bioparser::bioparser
+-    bioparser::bioparser
 -    biosoup::biosoup)
-+    biosoup::biosoup
 +    z)
  
    target_compile_definitions(spoa_exe PRIVATE VERSION="${PROJECT_VERSION}")
    set_property(TARGET spoa_exe PROPERTY OUTPUT_NAME spoa)
-@@ -281,6 +282,7 @@ if (spoa_build_tests)
+@@ -279,8 +241,7 @@
+ 
+   target_link_libraries(spoa_test
      spoa
-     bioparser::bioparser
-     biosoup::biosoup
+-    bioparser::bioparser
+-    biosoup::biosoup
 +    z
      GTest::Main)
  



View it on GitLab: https://salsa.debian.org/med-team/spoa/-/commit/af4560c0e447f541997a2ff37c7a4b83d0adffcc

-- 
View it on GitLab: https://salsa.debian.org/med-team/spoa/-/commit/af4560c0e447f541997a2ff37c7a4b83d0adffcc
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