[med-svn] [Git][med-team/community/helper-scripts][master] automatic update

Andreas Tille (@tille) gitlab at salsa.debian.org
Sun Feb 5 01:42:36 GMT 2023



Andreas Tille pushed to branch master at Debian Med / community / helper-scripts


Commits:
0d3716cb by Andreas Tille at 2023-02-05T01:42:28+00:00
automatic update

- - - - -


4 changed files:

- debian-med-tests.txt
- debian-science-tests.txt
- outdated_med-packages.txt
- python-team-tests.txt


Changes:

=====================================
debian-med-tests.txt
=====================================
@@ -1,28 +1,28 @@
-Last-Update: Sat, 04 Feb 2023 13:42:04 +0000
+Last-Update: Sun, 05 Feb 2023 01:42:03 +0000
 
  Source                        | Vote   |     Tasks                                           |                                 Tags                                 
 -------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------
- orthanc                       |    113 | {imaging,practice,covid-19}                         | 
- orthanc-wsi                   |     53 | {his,covid-19,practice,imaging,laboratory,oncology} | 
+ orthanc                       |    113 | {covid-19,imaging,practice}                         | 
+ orthanc-wsi                   |     53 | {laboratory,oncology,practice,covid-19,his,imaging} | 
  amide                         |     23 | {imaging}                                           | 
  dicomscope                    |     18 | {imaging}                                           | 
  orthanc-webviewer             |     17 | {imaging}                                           | 
- gnumed-server                 |     12 | {practice,covid-19}                                 | 
- orthanc-dicomweb              |     10 | {imaging,covid-19}                                  | 
+ gnumed-server                 |     12 | {covid-19,practice}                                 | 
+ orthanc-dicomweb              |     10 | {covid-19,imaging}                                  | 
  mrtrix3                       |      8 | {imaging}                                           | 
  orthanc-gdcm                  |      8 | {imaging}                                           | 
  libminc                       |      7 | {imaging-dev}                                       | 
  orthanc-postgresql            |      6 | {imaging}                                           | 
  adun.app                      |      5 | {bio}                                               | 
  biojava-live                  |      5 | {bio-dev}                                           | 
- oscar                         |      5 | {tools,practice,data}                               | 
+ oscar                         |      5 | {data,tools,practice}                               | 
  librg-utils-perl              |      4 | {bio}                                               | 
  bart-view                     |      3 | {imaging}                                           | 
  king                          |      3 | {imaging,typesetting}                               | 
  orthanc-mysql                 |      3 | {imaging}                                           | 
  orthanc-python                |      3 | {covid-19}                                          | 
  pixelmed                      |      3 | {imaging}                                           | 
- treeview                      |      3 | {bio,bio-phylogeny}                                 | 
+ treeview                      |      3 | {bio-phylogeny,bio}                                 | 
  blimps                        |      2 | {bio}                                               | 
  getdata                       |      2 | {bio}                                               | 
  jebl2                         |      2 | {bio-dev}                                           | 
@@ -40,22 +40,22 @@ Last-Update: Sat, 04 Feb 2023 13:42:04 +0000
  libgenome                     |      1 | {bio-dev}                                           | 
  libvistaio                    |      1 | {imaging-dev}                                       | 
  mauve-aligner                 |      1 | {bio}                                               | 
- melting                       |      1 | {bio,cloud}                                         | 
+ melting                       |      1 | {cloud,bio}                                         | 
  mia                           |      1 | {imaging}                                           | 
  opencfu                       |      1 | {laboratory}                                        | 
  papyrus                       |      1 | {imaging-dev}                                       | 
- phyutility                    |      1 | {cloud,bio}                                         | 
+ phyutility                    |      1 | {bio,cloud}                                         | 
  piler                         |      1 | {bio}                                               | 
  placnet                       |      1 | {bio}                                               | 
  rambo-k                       |      1 | {bio}                                               | 
  runcircos-gui                 |      1 | {bio}                                               | 
- salmon                        |      1 | {bio,covid-19}                                      | 
- sibsim4                       |      1 | {cloud,bio}                                         | 
+ salmon                        |      1 | {covid-19,bio}                                      | 
+ sibsim4                       |      1 | {bio,cloud}                                         | 
  spread-phy                    |      1 | {bio,bio-phylogeny}                                 | 
  stacks                        |      1 | {bio}                                               | 
- vienna-rna                    |      1 | {bio,covid-19}                                      | 
- acedb                         |      0 | {cloud,bio}                                         | 
- anfo                          |      0 | {bio,cloud}                                         | 
+ vienna-rna                    |      1 | {covid-19,bio}                                      | 
+ acedb                         |      0 | {bio,cloud}                                         | 
+ anfo                          |      0 | {cloud,bio}                                         | 
  arden                         |      0 | {cloud,bio}                                         | 
  assemblytics                  |      0 | {bio}                                               | 
  bambamc                       |      0 | {bio-dev}                                           | 
@@ -63,28 +63,28 @@ Last-Update: Sat, 04 Feb 2023 13:42:04 +0000
  biojava4-live                 |      0 | {bio-dev}                                           | 
  biojava6-live                 |      0 | {bio-dev}                                           | 
  biosyntax                     |      0 | {bio}                                               | 
- bio-tradis                    |      0 | {bio,bio-dev}                                       | 
+ bio-tradis                    |      0 | {bio-dev,bio}                                       | 
  bitseq                        |      0 | {bio}                                               | 
  btllib                        |      0 | {bio}                                               | 
  btllib                        |      0 | {bio-dev}                                           | 
  camp                          |      0 | {imaging-dev}                                       | 
  capsule-maven-nextflow        |      0 | {bio-dev}                                           | 
  cat-bat                       |      0 | {covid-19,bio}                                      | 
- clonalframeml                 |      0 | {bio,covid-19}                                      | 
+ clonalframeml                 |      0 | {covid-19,bio}                                      | 
  clonalorigin                  |      0 | {bio}                                               | 
  ctn                           |      0 | {imaging-dev}                                       | 
- cufflinks                     |      0 | {cloud,bio}                                         | 
+ cufflinks                     |      0 | {bio,cloud}                                         | 
  cutesv                        |      0 | {bio}                                               | 
  dextractor                    |      0 | {covid-19,bio}                                      | 
  eegdev                        |      0 | {imaging-dev}                                       | 
- embassy-domainatrix           |      0 | {bio,cloud}                                         | 
- embassy-domalign              |      0 | {cloud,bio}                                         | 
- embassy-domsearch             |      0 | {cloud,bio}                                         | 
+ embassy-domainatrix           |      0 | {cloud,bio}                                         | 
+ embassy-domalign              |      0 | {bio,cloud}                                         | 
+ embassy-domsearch             |      0 | {bio,cloud}                                         | 
  fastml                        |      0 | {bio}                                               | 
  fis-gtm                       |      0 | {his}                                               | 
  gatk-bwamem                   |      0 | {bio-dev}                                           | 
  hinge                         |      0 | {bio}                                               | 
- htscodecs                     |      0 | {covid-19,bio-dev}                                  | 
+ htscodecs                     |      0 | {bio-dev,covid-19}                                  | 
  insighttoolkit5               |      0 | {imaging-dev}                                       | 
  ipig                          |      0 | {bio}                                               | 
  jmodeltest                    |      0 | {bio,bio-phylogeny}                                 | 
@@ -104,7 +104,7 @@ Last-Update: Sat, 04 Feb 2023 13:42:04 +0000
  libctapimkt                   |      0 | {practice}                                          | 
  libgkarrays                   |      0 | {bio-dev}                                           | 
  libhmsbeagle                  |      0 | {bio-dev}                                           | 
- libics                        |      0 | {covid-19,imaging-dev}                              | 
+ libics                        |      0 | {imaging-dev,covid-19}                              | 
  libjloda-java                 |      0 | {bio-dev}                                           | 
  libmaus2                      |      0 | {bio-dev,covid-19}                                  | 
  libmems                       |      0 | {bio-dev}                                           | 
@@ -123,7 +123,7 @@ Last-Update: Sat, 04 Feb 2023 13:42:04 +0000
  metaphlan                     |      0 | {bio}                                               | 
  metastudent-data              |      0 | {bio}                                               | 
  metastudent-data-2            |      0 | {bio}                                               | 
- mhap                          |      0 | {bio-ngs,bio}                                       | 
+ mhap                          |      0 | {bio,bio-ngs}                                       | 
  mia                           |      0 | {imaging-dev}                                       | 
  miaviewit                     |      0 | {imaging-dev}                                       | 
  microbegps                    |      0 | {bio}                                               | 
@@ -136,9 +136,9 @@ Last-Update: Sat, 04 Feb 2023 13:42:04 +0000
  pbseqlib                      |      0 | {bio-dev}                                           | 
  pigx-rnaseq                   |      0 | {covid-19,bio}                                      | 
  pique                         |      0 | {bio}                                               | 
- plasmidid                     |      0 | {covid-19,bio}                                      | 
+ plasmidid                     |      0 | {bio,covid-19}                                      | 
  plasmidseeker                 |      0 | {bio}                                               | 
- pplacer                       |      0 | {bio-phylogeny,bio,covid-19}                        | 
+ pplacer                       |      0 | {bio,covid-19,bio-phylogeny}                        | 
  proalign                      |      0 | {bio-phylogeny,bio}                                 | 
  provean                       |      0 | {bio}                                               | 
  pscan-chip                    |      0 | {bio}                                               | 
@@ -160,7 +160,7 @@ Last-Update: Sat, 04 Feb 2023 13:42:04 +0000
  sight                         |      0 | {imaging-dev}                                       | 
  ska                           |      0 | {bio}                                               | 
  skesa                         |      0 | {bio}                                               | 
- smrtanalysis                  |      0 | {covid-19,bio}                                      | 
+ smrtanalysis                  |      0 | {bio,covid-19}                                      | 
  soapaligner                   |      0 | {bio}                                               | 
  soapsnp                       |      0 | {bio}                                               | 
  sortmerna                     |      0 | {bio}                                               | 
@@ -176,12 +176,12 @@ Last-Update: Sat, 04 Feb 2023 13:42:04 +0000
  tophat-recondition            |      0 | {bio,covid-19}                                      | 
  trace2dbest                   |      0 | {bio}                                               | 
  tracetuner                    |      0 | {bio}                                               | 
- varscan                       |      0 | {covid-19,bio}                                      | 
+ varscan                       |      0 | {bio,covid-19}                                      | 
  xdffileio                     |      0 | {imaging-dev}                                       | 
  xpore                         |      0 | {bio}                                               | 
  xxsds-dynamic                 |      0 | {bio-dev}                                           | 
  gatk-fermilite                |     -1 | {bio-dev}                                           | 
  mssstest                      |     -1 | {tools}                                             | 
- orthanc-neuro                 |     -1 | {imaging,psychology}                                | 
+ orthanc-neuro                 |     -1 | {psychology,imaging}                                | 
 (211 rows)
 


=====================================
debian-science-tests.txt
=====================================
@@ -1,9 +1,9 @@
-Last-Update: Sat, 04 Feb 2023 13:42:06 +0000
+Last-Update: Sun, 05 Feb 2023 01:42:05 +0000
 
       Source                             | Vote   |             Tasks                                                  |                                Tags                                
 -----------------------------------------+--------+--------------------------------------------------------------------+--------------------------------------------------------------------
  gts                                     |   3136 | {viewing}                                                          | 
- sympy                                   |   2145 | {nanoscale-physics,physics}                                        | 
+ sympy                                   |   2145 | {physics,nanoscale-physics}                                        | 
  suitesparse                             |    252 | {mathematics-dev,numericalcomputation}                             | 
  nltk                                    |    185 | {linguistics}                                                      | 
  armadillo                               |    156 | {mathematics-dev}                                                  | 
@@ -13,8 +13,8 @@ Last-Update: Sat, 04 Feb 2023 13:42:06 +0000
  arpack                                  |     72 | {mathematics-dev}                                                  | 
  arduino-mk                              |     41 | {robotics}                                                         | 
  cypari2                                 |     40 | {mathematics-dev}                                                  | 
- rubiks                                  |     39 | {mathematics,geometry}                                             | 
- fftw                                    |     36 | {meteorology-dev,mathematics-dev,physics-dev}                      | 
+ rubiks                                  |     39 | {geometry,mathematics}                                             | 
+ fftw                                    |     36 | {mathematics-dev,physics-dev,meteorology-dev}                      | 
  scalapack                               |     34 | {nanoscale-physics-dev}                                            | 
  flintqs                                 |     33 | {mathematics}                                                      | 
  imview                                  |     31 | {viewing}                                                          | 
@@ -26,10 +26,10 @@ Last-Update: Sat, 04 Feb 2023 13:42:06 +0000
  cernlib                                 |     18 | {highenergy-physics}                                               | 
  sketch                                  |     18 | {typesetting}                                                      | 
  fftw                                    |     17 | {meteorology-dev,mathematics-dev,physics-dev}                      | 
- coinor-symphony                         |     15 | {logic,numericalcomputation,mathematics}                           | 
+ coinor-symphony                         |     15 | {numericalcomputation,mathematics,logic}                           | 
  feedgnuplot                             |     15 | {viewing}                                                          | 
  gfsview                                 |     15 | {viewing}                                                          | 
- flann                                   |     14 | {engineering-dev,mathematics-dev}                                  | 
+ flann                                   |     14 | {mathematics-dev,engineering-dev}                                  | 
  guidata                                 |     14 | {dataacquisition-dev}                                              | 
  guiqwt                                  |     14 | {numericalcomputation,viewing}                                     | 
  cernlib                                 |     13 | {highenergy-physics-dev}                                           | 
@@ -41,12 +41,12 @@ Last-Update: Sat, 04 Feb 2023 13:42:06 +0000
  lxi-tools                               |     12 | {dataacquisition,engineering}                                      | 
  matlab-support                          |     12 | {mathematics,numericalcomputation}                                 | 
  amp                                     |     11 | {chemistry}                                                        | 
- debian-science                          |     11 | {physics,mathematics,nanoscale-physics,machine-learning,economics} | 
+ debian-science                          |     11 | {machine-learning,nanoscale-physics,mathematics,economics,physics} | 
  geg                                     |     11 | {viewing}                                                          | 
  polylib                                 |     11 | {mathematics}                                                      | 
  rheolef                                 |     11 | {mathematics}                                                      | 
- debian-science                          |     10 | {physics,nanoscale-physics,statistics,economics}                   | 
- getdp                                   |     10 | {mathematics,engineering,simulations}                              | 
+ debian-science                          |     10 | {statistics,nanoscale-physics,economics,physics}                   | 
+ getdp                                   |     10 | {simulations,engineering,mathematics}                              | 
  mathgl                                  |     10 | {viewing}                                                          | 
  muparser                                |     10 | {mathematics-dev}                                                  | 
  python-escript                          |     10 | {engineering,simulations,numericalcomputation}                     | 
@@ -56,16 +56,16 @@ Last-Update: Sat, 04 Feb 2023 13:42:06 +0000
  opencascade                             |      9 | {simulations}                                                      | 
  ros-ros-environment                     |      9 | {robotics-dev}                                                     | 
  tango                                   |      9 | {dataacquisition}                                                  | 
- toulbar2                                |      9 | {mathematics,numericalcomputation,logic,physics}                   | 
+ toulbar2                                |      9 | {physics,mathematics,logic,numericalcomputation}                   | 
  vitables                                |      9 | {numericalcomputation}                                             | 
- code-saturne                            |      8 | {mathematics-dev,engineering-dev}                                  | 
+ code-saturne                            |      8 | {engineering-dev,mathematics-dev}                                  | 
  libcgns                                 |      8 | {engineering}                                                      | 
  libitpp                                 |      8 | {mathematics-dev,engineering-dev}                                  | 
  lrcalc                                  |      8 | {mathematics}                                                      | 
  scram                                   |      8 | {engineering}                                                      | 
  alberta                                 |      7 | {engineering-dev}                                                  | 
  coinmp                                  |      7 | {mathematics-dev,numericalcomputation,logic}                       | 
- debian-science                          |      7 | {nanoscale-physics,machine-learning,physics,economics}             | 
+ debian-science                          |      7 | {machine-learning,physics,economics,nanoscale-physics}             | 
  iml                                     |      7 | {mathematics-dev}                                                  | 
  libhomfly                               |      7 | {mathematics-dev}                                                  | 
  ros-rosconsole                          |      7 | {robotics-dev}                                                     | 
@@ -83,14 +83,14 @@ Last-Update: Sat, 04 Feb 2023 13:42:06 +0000
  dune-istl                               |      5 | {mathematics-dev}                                                  | 
  libcgns                                 |      5 | {engineering-dev}                                                  | 
  lrcalc                                  |      5 | {mathematics-dev}                                                  | 
- metis-edf                               |      5 | {engineering,numericalcomputation}                                 | 
+ metis-edf                               |      5 | {numericalcomputation,engineering}                                 | 
  cernlib                                 |      4 | {highenergy-physics}                                               | 
  coda                                    |      4 | {meteorology-dev}                                                  | 
- etsf-io                                 |      4 | {nanoscale-physics,physics}                                        | 
+ etsf-io                                 |      4 | {physics,nanoscale-physics}                                        | 
  gf2x                                    |      4 | {mathematics-dev}                                                  | 
  harp                                    |      4 | {meteorology}                                                      | 
  hpcc                                    |      4 | {numericalcomputation,distributedcomputing}                        | 
- jeuclid                                 |      4 | {typesetting,viewing}                                              | 
+ jeuclid                                 |      4 | {viewing,typesetting}                                              | 
  libvigraimpex                           |      4 | {imageanalysis-dev,machine-learning}                               | 
  libvigraimpex                           |      4 | {machine-learning,imageanalysis-dev}                               | 
  openstereogram                          |      4 | {tools}                                                            | 
@@ -105,7 +105,7 @@ Last-Update: Sat, 04 Feb 2023 13:42:06 +0000
  dxflib                                  |      3 | {engineering-dev}                                                  | 
  ipe-tools                               |      3 | {typesetting}                                                      | 
  libgetdata                              |      3 | {dataacquisition}                                                  | 
- libgtkdatabox                           |      3 | {viewing-dev,engineering-dev}                                      | 
+ libgtkdatabox                           |      3 | {engineering-dev,viewing-dev}                                      | 
  libmatheval                             |      3 | {mathematics}                                                      | 
  libmatheval                             |      3 | {mathematics-dev}                                                  | 
  neartree                                |      3 | {numericalcomputation,mathematics-dev}                             | 
@@ -131,7 +131,7 @@ Last-Update: Sat, 04 Feb 2023 13:42:06 +0000
  mbt                                     |      2 | {linguistics}                                                      | 
  morse-simulator                         |      2 | {robotics}                                                         | 
  openigtlink                             |      2 | {robotics-dev}                                                     | 
- openmx                                  |      2 | {physics,nanoscale-physics}                                        | 
+ openmx                                  |      2 | {nanoscale-physics,physics}                                        | 
  qd                                      |      2 | {mathematics-dev}                                                  | 
  qwtplot3d                               |      2 | {viewing-dev}                                                      | 
  taurus                                  |      2 | {dataacquisition}                                                  | 
@@ -182,8 +182,8 @@ Last-Update: Sat, 04 Feb 2023 13:42:06 +0000
  asl                                     |      0 | {physics-dev}                                                      | 
  calculix-ccx-doc                        |      0 | {simulations,engineering,numericalcomputation}                     | 
  calculix-ccx-test                       |      0 | {engineering,numericalcomputation,simulations}                     | 
+ cernlib                                 |      0 | {highenergy-physics,physics}                                       | 
  cernlib                                 |      0 | {highenergy-physics-dev}                                           | 
- cernlib                                 |      0 | {physics,highenergy-physics}                                       | 
  cernlib                                 |      0 | {highenergy-physics}                                               | 
  ckon                                    |      0 | {highenergy-physics-dev}                                           | 
  clhep                                   |      0 | {highenergy-physics-dev}                                           | 
@@ -203,7 +203,7 @@ Last-Update: Sat, 04 Feb 2023 13:42:06 +0000
  glpk-java                               |      0 | {mathematics-dev}                                                  | 
  libfolia                                |      0 | {linguistics}                                                      | 
  libgetdata                              |      0 | {dataacquisition-dev}                                              | 
- liblxi                                  |      0 | {dataacquisition-dev,engineering-dev}                              | 
+ liblxi                                  |      0 | {engineering-dev,dataacquisition-dev}                              | 
  liborigin2                              |      0 | {viewing-dev}                                                      | 
  libquantum                              |      0 | {numericalcomputation}                                             | 
  librsl                                  |      0 | {meteorology-dev}                                                  | 
@@ -225,17 +225,17 @@ Last-Update: Sat, 04 Feb 2023 13:42:06 +0000
  sagemath-database-graphs                |      0 | {mathematics}                                                      | 
  sagemath-database-polytopes             |      0 | {mathematics}                                                      | 
  siscone                                 |      0 | {highenergy-physics-dev}                                           | 
- slicot                                  |      0 | {robotics-dev,engineering-dev}                                     | 
+ slicot                                  |      0 | {engineering-dev,robotics-dev}                                     | 
  tachyon                                 |      0 | {mathematics}                                                      | 
  tamuanova                               |      0 | {statistics}                                                       | 
  tango                                   |      0 | {dataacquisition-dev}                                              | 
  triangle                                |      0 | {physics-dev}                                                      | 
- trilinos                                |      0 | {mathematics-dev,engineering-dev,physics-dev}                      | 
+ trilinos                                |      0 | {physics-dev,engineering-dev,mathematics-dev}                      | 
  visp-images                             |      0 | {robotics-dev}                                                     | 
  vlfeat                                  |      0 | {imageanalysis-dev}                                                | 
  apertium-afr-nld                        |     -1 | {linguistics}                                                      | 
  coinor-bonmin                           |     -1 | {mathematics}                                                      | 
- persalys                                |     -1 | {engineering,mathematics,statistics}                               | 
- persalys                                |     -1 | {engineering,statistics,mathematics}                               | 
+ persalys                                |     -1 | {statistics,engineering,mathematics}                               | 
+ persalys                                |     -1 | {statistics,mathematics,engineering}                               | 
 (268 rows)
 


=====================================
outdated_med-packages.txt
=====================================
The diff for this file was not included because it is too large.

=====================================
python-team-tests.txt
=====================================
@@ -1,4 +1,4 @@
-Last-Update: Sat, 04 Feb 2023 13:42:07 +0000
+Last-Update: Sun, 05 Feb 2023 01:42:05 +0000
 
   Source                          | Vote   |                          Tags                          
 ----------------------------------+--------+--------------------------------------------------------



View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/0d3716cb262d34cb90e52500088a2d6c9f4b0268

-- 
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/0d3716cb262d34cb90e52500088a2d6c9f4b0268
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