[med-svn] [Git][med-team/pdb2pqr][master] 6 commits: routine-update: Packaging update

[Andreas Tille (@tille)]

Andreas Tille pushed to branch master at Debian Med / pdb2pqr


Commits:
b6014c70 by Andreas Tille at 2023-02-05T08:42:28+01:00
routine-update: Packaging update

- - - - -
9b3cace6 by Andreas Tille at 2023-02-05T08:42:29+01:00
routine-update: Standards-Version: 4.6.2

- - - - -
069a9da0 by Andreas Tille at 2023-02-05T08:53:15+01:00
cme fix dpkg-control

- - - - -
68f08b4e by Andreas Tille at 2023-02-05T09:01:24+01:00
Drop version restriction from docutils

- - - - -
6ef24365 by Andreas Tille at 2023-02-05T09:02:05+01:00
Set upstream metadata fields: Bug-Database, Bug-Submit, Repository-Browse.

Changes-By: lintian-brush
Fixes: lintian: upstream-metadata-missing-bug-tracking
See-also: https://lintian.debian.org/tags/upstream-metadata-missing-bug-tracking.html

- - - - -
e332c071 by Andreas Tille at 2023-02-05T09:05:44+01:00
routine-update: Ready to upload to unstable

- - - - -


5 changed files:

- debian/changelog
- debian/control
- debian/patches/series
- + debian/patches/unversioned_docutils.patch
- debian/upstream/metadata


Changes:

=====================================
debian/changelog
=====================================
@@ -1,3 +1,12 @@
+pdb2pqr (3.5.2+dfsg-3) unstable; urgency=medium
+
+  * Standards-Version: 4.6.2 (routine-update)
+  * cme fix dpkg-control
+  * Drop version restriction from docutils
+    Closes: #1030444
+
+ -- Andreas Tille <tille at debian.org>  Sun, 05 Feb 2023 09:02:21 +0100
+
 pdb2pqr (3.5.2+dfsg-2) unstable; urgency=medium
 
   * Team upload.


=====================================
debian/control
=====================================
@@ -18,7 +18,7 @@ Build-Depends: debhelper-compat (= 13),
                python3-setuptools,
                python3-sphinx-rtd-theme,
                python3-testfixtures <!nocheck>
-Standards-Version: 4.6.0
+Standards-Version: 4.6.2
 Vcs-Browser: https://salsa.debian.org/med-team/pdb2pqr
 Vcs-Git: https://salsa.debian.org/med-team/pdb2pqr.git
 Homepage: https://www.poissonboltzmann.org
@@ -31,7 +31,6 @@ Depends: python3-numpy,
          ${misc:Depends},
          ${python3:Depends}
 Suggests: apbs
-Enhances: autodocktools
 Description: Preparation of protein structures for electrostatics calculations
  PDB2PQR is a Python software package that automates many of the common
  tasks of preparing structures for continuum electrostatics calculations.
@@ -59,7 +58,7 @@ Package: python3-pdb2pqr
 Architecture: all
 Section: python
 Depends: ${misc:Depends},
-         ${python3:Depends},
+         ${python3:Depends}
 Description: Preparation of protein structures for electrostatics calculations
  PDB2PQR is a Python software package that automates many of the common
  tasks of preparing structures for continuum electrostatics calculations.


=====================================
debian/patches/series
=====================================
@@ -1 +1,2 @@
 skip-network-tests.patch
+unversioned_docutils.patch


=====================================
debian/patches/unversioned_docutils.patch
=====================================
@@ -0,0 +1,16 @@
+Author: Andreas Tille <tille at debian.org>
+Last-Update: Sun, 05 Feb 2023 08:42:28 +0100
+Bug-Debian: https://bugs.debian.org/1030444
+Description: Drop version restriction from docutils
+
+--- a/setup.py
++++ b/setup.py
+@@ -58,7 +58,7 @@ setup(
+         "numpy",
+         "propka >= 3.2",
+         "requests",
+-        "docutils < 0.18"
++        "docutils"
+     ],
+     url="http://www.poissonboltzmann.org",
+     packages=find_packages(


=====================================
debian/upstream/metadata
=====================================
@@ -1,3 +1,5 @@
+Bug-Database: https://github.com/Electrostatics/pdb2pqr/issues
+Bug-Submit: https://github.com/Electrostatics/pdb2pqr/issues/new
 Registration: "http://spreadsheets.google.com/viewform?hl=en&formkey=dHFpa3Nvcnl0cjR1U3g3UTdSYU1pWWc6MA.."
 Reference:
 - Author: >
@@ -45,3 +47,4 @@ Registry:
   Entry: OMICS_14370
 - Name: bio.tools
   Entry: NA
+Repository-Browse: https://github.com/Electrostatics/pdb2pqr



View it on GitLab: https://salsa.debian.org/med-team/pdb2pqr/-/compare/f3904d1ea9c379945977b16231e3b8150e4fc2dd...e332c07111acc7c25a018e7b41d661ea6c3950c1

-- 
View it on GitLab: https://salsa.debian.org/med-team/pdb2pqr/-/compare/f3904d1ea9c379945977b16231e3b8150e4fc2dd...e332c07111acc7c25a018e7b41d661ea6c3950c1
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