[med-svn] [Git][med-team/augur][master] 9 commits: routine-update: New upstream version

[Étienne Mollier (@emollier)]

Étienne Mollier pushed to branch master at Debian Med / augur


Commits:
c0e0fd43 by Étienne Mollier at 2023-06-11T13:09:25+02:00
routine-update: New upstream version

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bb9e6a75 by Étienne Mollier at 2023-06-11T13:09:26+02:00
New upstream version 22.0.2
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00ed1a53 by Étienne Mollier at 2023-06-11T13:10:28+02:00
Update upstream source from tag 'upstream/22.0.2'

Update to upstream version '22.0.2'
with Debian dir 1103878a1bf0fe1ad789794aa4a5aaa242d28a93
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aeaf9d91 by Étienne Mollier at 2023-06-11T13:10:31+02:00
routine-update: Drop ancient X-Python-Version field

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f8730393 by Étienne Mollier at 2023-06-11T13:10:34+02:00
Add missing build dependency on python3:any | python3-all:any | python3-dev:any | python3-all-dev:any | dh-sequence-python3 for addon python3.

Changes-By: lintian-brush
Fixes: lintian: missing-build-dependency-for-dh-addon
See-also: https://lintian.debian.org/tags/missing-build-dependency-for-dh-addon.html

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653b7c92 by Étienne Mollier at 2023-06-11T13:15:03+02:00
routine-update: Ready to upload to unstable

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9f2f5991 by Étienne Mollier at 2023-06-11T13:48:31+02:00
d/control: rationalize python build dependencies

This resolves a lintian warning about redundant build dependencies
declarations, and re-enable support for all python3 versions available
on the system, as this had to be disabled during python3.11
transition.

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2bdc9cd6 by Étienne Mollier at 2023-06-11T13:50:43+02:00
d/tests/*: re-enable tests on all python3 versions

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fcfb4b06 by Étienne Mollier at 2023-06-11T13:58:45+02:00
update changelog

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30 changed files:

- + .cramrc
- + .github/dependabot.yml
- .github/workflows/ci.yaml
- .github/workflows/release.yaml
- .gitignore
- .readthedocs.yml
- CHANGES.md
- augur/__init__.py
- augur/__version__.py
- augur/align.py
- augur/ancestral.py
- augur/clades.py
- augur/curate/__init__.py
- augur/data/schema-measurements-collection-config.json
- augur/data/schema-measurements.json
- augur/dates.py → augur/dates/__init__.py
- augur/util_support/date_disambiguator.py → augur/dates/ambiguous_date.py
- + augur/dates/errors.py
- augur/distance.py
- augur/export_v1.py
- augur/export_v2.py
- augur/filter/__init__.py
- augur/filter/_run.py
- + augur/filter/constants.py
- augur/filter/include_exclude_rules.py
- augur/filter/io.py
- augur/filter/subsample.py
- augur/frequencies.py
- augur/frequency_estimators.py
- augur/index.py


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/augur/-/compare/2c2a831f03c880332cc11100266e87899f74aaa6...fcfb4b063108745db41d4ea06e70785b9a21abea

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View it on GitLab: https://salsa.debian.org/med-team/augur/-/compare/2c2a831f03c880332cc11100266e87899f74aaa6...fcfb4b063108745db41d4ea06e70785b9a21abea
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