[med-svn] [Git][med-team/pbmm2][master] 4 commits: routine-update: New upstream version

[Andreas Tille (@tille)]

Andreas Tille pushed to branch master at Debian Med / pbmm2


Commits:
a6cd5b90 by Andreas Tille at 2024-02-22T18:27:54+01:00
routine-update: New upstream version

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15d0291c by Andreas Tille at 2024-02-22T18:27:55+01:00
New upstream version 1.13.1
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fe2d3ae4 by Andreas Tille at 2024-02-22T18:28:19+01:00
Update upstream source from tag 'upstream/1.13.1'

Update to upstream version '1.13.1'
with Debian dir eacc08e4aaf1971f9826e894b6ad85e9316a1f9f
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0a751949 by Andreas Tille at 2024-02-22T18:28:19+01:00
routine-update: Standards-Version: 4.6.2

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30 changed files:

- .clang-format
- README.md
- debian/changelog
- debian/control
- img/pbmm2.png
- include/pbmm2/AlignmentMode.h
- include/pbmm2/LibraryInfo.h
- include/pbmm2/MM2Helper.h
- include/pbmm2/MM2Settings.h
- include/pbmm2/Pbmm2Version.h
- meson.build
- − scripts/ci/build.sh
- − scripts/ci/install.sh
- − scripts/ci/setup.sh
- − scripts/ci/test.sh
- + scripts/cram
- src/AbortException.h
- src/AlignSettings.cpp
- src/AlignSettings.h
- src/AlignWorkflow.cpp
- src/AlignWorkflow.h
- src/BamIndex.h
- src/IndexSettings.cpp
- src/IndexSettings.h
- src/IndexWorkflow.cpp
- src/IndexWorkflow.h
- src/InputOutputUX.cpp
- src/InputOutputUX.h
- src/LibraryGitHash.h.in
- src/LibraryInfo.cpp


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/pbmm2/-/compare/3f56a3f5be2f2ee12e9f94c4baa3ad7ad652fa48...0a751949296f040188fccdd25dad5a3acbde1386

-- 
View it on GitLab: https://salsa.debian.org/med-team/pbmm2/-/compare/3f56a3f5be2f2ee12e9f94c4baa3ad7ad652fa48...0a751949296f040188fccdd25dad5a3acbde1386
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