[med-svn] [Git][med-team/python-cutadapt][master] 8 commits: routine-update: New upstream version

[Michael R. Crusoe (@crusoe)]

Michael R. Crusoe pushed to branch master at Debian Med / python-cutadapt


Commits:
779f3400 by Michael R. Crusoe at 2024-03-26T15:18:38+01:00
routine-update: New upstream version

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ac6da479 by Michael R. Crusoe at 2024-03-26T15:18:39+01:00
New upstream version 4.7
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d8f9516e by Michael R. Crusoe at 2024-03-26T15:18:40+01:00
Update upstream source from tag 'upstream/4.7'

Update to upstream version '4.7'
with Debian dir ec76274446660a32b4d73dcdef81ed343dc449e0
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121ff027 by Michael R. Crusoe at 2024-03-26T16:43:02+01:00
routine-update: Build-Depends: s/dh-python/dh-sequence-python3/

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02e5e6ed by Michael R. Crusoe at 2024-03-26T16:43:21+01:00
Dropped patch Update__kmer_finder.pyx_to_always_use_a_64- bit_integer.patch that was applied upstream.

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101f332e by Michael R. Crusoe at 2024-03-26T16:49:58+01:00
d/control: Explictly build-depend on python3-pytest so that pybuild understands to use it automatically. Remove the now unneeded reference in d/rules.

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f3541be9 by Michael R. Crusoe at 2024-03-26T16:49:58+01:00
add a d/clean file, simplify d/rules using that

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dd6c5893 by Michael R. Crusoe at 2024-03-26T16:49:59+01:00
routine-update: Ready to upload to unstable

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30 changed files:

- .github/workflows/ci.yml
- .github/workflows/pyinstaller.yml
- .readthedocs.yaml
- CHANGES.rst
- − CITATION
- + CITATION.cff
- LICENSE
- README.rst
- debian/changelog
- + debian/clean
- debian/control
- − debian/patches/Update__kmer_finder.pyx_to_always_use_a_64-bit_integer.patch
- − debian/patches/series
- debian/rules
- doc/algorithms.rst
- doc/conf.py
- doc/guide.rst
- doc/installation.rst
- doc/recipes.rst
- doc/reference.rst
- doc/requirements.txt
- pyproject.toml
- src/cutadapt/_align.pyx
- src/cutadapt/_kmer_finder.pyi
- src/cutadapt/_kmer_finder.pyx
- src/cutadapt/adapters.py
- src/cutadapt/cli.py
- + src/cutadapt/expected_errors.h
- src/cutadapt/files.py
- src/cutadapt/log.py


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/python-cutadapt/-/compare/fd44f54ed2d3a163a823217062ac592b3a33b366...dd6c58936fda92a7a004f4cc4010455dc75a2b94

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View it on GitLab: https://salsa.debian.org/med-team/python-cutadapt/-/compare/fd44f54ed2d3a163a823217062ac592b3a33b366...dd6c58936fda92a7a004f4cc4010455dc75a2b94
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