<!DOCTYPE html PUBLIC "-//W3C//DTD HTML 4.0 Transitional//EN" "http://www.w3.org/TR/REC-html40/loose.dtd">
<html lang="en">
<head>
<meta content="text/html; charset=utf-8" http-equiv="Content-Type">
<title>
GitLab
</title>



<style>img {
max-width: 100%; height: auto;
}
</style>
</head>
<body>
<div class="content">
<h3>
Andreas Tille pushed to branch upstream
at <a href="https://salsa.debian.org/med-team/python-treetime">Debian Med / python-treetime</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/python-treetime/commit/e821a2b62cc87be80213db490ba19b5c80a7ef2c">e821a2b6</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2018-04-16T14:41:35+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">New upstream version 0.2.4</pre>
</li>
</ul>
<h4>30 changed files:</h4>
<ul>
<li class="file-stats">
<a href="#a5cc2925ca8258af241be7e5b0381edf30266302">
.gitignore
</a>
</li>
<li class="file-stats">
<a href="#b6024023219e26c40d54852b6f34a1c5b922d0cb">
.travis_test.sh
</a>
</li>
<li class="file-stats">
<a href="#8ec9a00bfd09b3190ac6b22251dbb1aa95a0579d">
README.md
</a>
</li>
<li class="file-stats">
<a href="#60ad4f3d2e9b04a9b0a0bb97ab6a8a4c018b785e">
__init__.py
</a>
</li>
<li class="file-stats">
<a href="#0d4960bf8df5eeb92c2f47c6bfce4a83740a715a">
<span class="deleted-file">

ancestral_reconstruction.py
</span>
</a>
</li>
<li class="file-stats">
<a href="#5cf0ac0f280906491c0aca59312853fab71baddf">
<span class="new-file">
+
bin/ancestral_reconstruction.py
</span>
</a>
</li>
<li class="file-stats">
<a href="#54f2617988e4910565a07e61d2996816b6b855c6">
<span class="new-file">
+
bin/homoplasy_scanner.py
</span>
</a>
</li>
<li class="file-stats">
<a href="#b38bc05e27c233b60ebb858a9b66291e82aee1f0">
<span class="new-file">
+
bin/mugration.py
</span>
</a>
</li>
<li class="file-stats">
<a href="#617a678b23c71ae5c770a95f39491256bf099493">
temporal_signal.py

bin/temporal_signal.py
</a>
</li>
<li class="file-stats">
<a href="#06b454a212fe24dc35002e7135a63778d3aee8a9">
<span class="new-file">
+
bin/timetree_inference.py
</span>
</a>
</li>
<li class="file-stats">
<a href="#ac3eeab201f493294c9965224c39bee9585ae57c">
data/H3N2_NA_allyears_NA.20.metadata.csv
</a>
</li>
<li class="file-stats">
<a href="#13e9fb970c625169e4a578b3e5ea4d001a1e6c7a">
data/H3N2_NA_allyears_NA.200.metadata.csv
</a>
</li>
<li class="file-stats">
<a href="#d0014228f19d1bbfcd27bf8f968422576b1ca87e">
<span class="new-file">
+
data/Zika_country_weights.csv
</span>
</a>
</li>
<li class="file-stats">
<a href="#e096c4ce06ad93c0c6a6fb90d8ff73f94549e819">
<span class="new-file">
+
data/Zika_metadata.csv
</span>
</a>
</li>
<li class="file-stats">
<a href="#97710080c1031c63bb89fda000e8a0b272bc83d5">
<span class="new-file">
+
data/Zika_tree.newick
</span>
</a>
</li>
<li class="file-stats">
<a href="#5ba175c4594e01550d4625462e44df3d96fd4fb0">
data/ebola.csv

data/ebola.metadata.csv
</a>
</li>
<li class="file-stats">
<a href="#c86c7a6d9a7bc77f1c375315f47ff6952729ba5b">
<span class="new-file">
+
doc/Makefile
</span>
</a>
</li>
<li class="file-stats">
<a href="#b7426cf208d4d7e3bac1f490d088bbd273a8944a">
<span class="deleted-file">

doc/__init__.py
</span>
</a>
</li>
<li class="file-stats">
<a href="#a50b4c1d63d2c1667ef575e52df5a574bc5763e7">
<span class="new-file">
+
doc/source/clock_tree.rst
</span>
</a>
</li>
<li class="file-stats">
<a href="#9d4e8ab62832d7b298261aae1fe1123d28783525">
<span class="new-file">
+
doc/source/conf.py
</span>
</a>
</li>
<li class="file-stats">
<a href="#878c208fe2cd29228f8b029e7c918b64c599e39a">
<span class="new-file">
+
doc/source/gtr.rst
</span>
</a>
</li>
<li class="file-stats">
<a href="#40ab2307cc3e5eb970b3a70221d81e7e45f4562f">
<span class="new-file">
+
doc/source/index.rst
</span>
</a>
</li>
<li class="file-stats">
<a href="#831e7c1a61ddb7e9ab643d7b97553c0570d01dcb">
<span class="new-file">
+
doc/source/treeanc.rst
</span>
</a>
</li>
<li class="file-stats">
<a href="#2c5985e631c97e1388ce6bca590198d4143786f3">
<span class="new-file">
+
doc/source/treetime.rst
</span>
</a>
</li>
<li class="file-stats">
<a href="#0776e8a8b6bab01849c5c1100893fc5fd0e38515">
<span class="new-file">
+
examples/basic_clock_tree_diagnostics.py
</span>
</a>
</li>
<li class="file-stats">
<a href="#dd798bda06f6ed649a6d578ee15daa665aa3906c">
<span class="new-file">
+
examples/basic_tree_time_diagnostics.py
</span>
</a>
</li>
<li class="file-stats">
<a href="#7bc4ba6781bc8f9d286c76153361df826224a9a4">
examples/ebola.py
</a>
</li>
<li class="file-stats">
<a href="#7a225a7f51940781c1829ec657351546c561517d">
examples/relaxed_clock.py
</a>
</li>
<li class="file-stats">
<a href="#deb43a1036c75e78cb38973d17a186d827c1489a">
examples/rerooting_and_timetrees.py
</a>
</li>
<li class="file-stats">
<a href="#7a67e61016d3fbd3ef6835dfbdac5d5d02cc94b8">
<span class="new-file">
+
examples/rerooting_with_multiplicity.py
</span>
</a>
</li>
</ul>
<h5>The diff was not included because it is too large.</h5>

</div>
<div class="footer" style="margin-top: 10px;">
<p style="font-size: small; color: #777;">

<br>
<a href="https://salsa.debian.org/med-team/python-treetime/commit/e821a2b62cc87be80213db490ba19b5c80a7ef2c">View it on GitLab</a>.
<br>
You're receiving this email because of your account on salsa.debian.org.
If you'd like to receive fewer emails, you can
adjust your notification settings.
<script type="application/ld+json">{"@context":"http://schema.org","@type":"EmailMessage","action":{"@type":"ViewAction","name":"View Commit","url":"https://salsa.debian.org/med-team/python-treetime/commit/e821a2b62cc87be80213db490ba19b5c80a7ef2c"}}</script>
</p>
</div>
</body>
</html>