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GitLab

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<h3>

Andreas Tille pushed to branch upstream

at <a href="https://salsa.debian.org/med-team/picard-tools">Debian Med / picard-tools</a>

</h3>

<h4>

Commits:

</h4>

<ul>

<li>

<strong><a href="https://salsa.debian.org/med-team/picard-tools/commit/60f0c861d4133e4479af9dd51af122154491ed73">60f0c861</a></strong>

<div>

<span>by Andreas Tille</span>

<i>at 2018-04-17T16:41:27+02:00</i>

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<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">New upstream version 2.18.2+dfsg</pre>

</li>

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<h4>25 changed files:</h4>

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<li class="file-stats">

<a href="#05a721ebe3ba0754116825ed1359ff1785f4bbac">

.dockerignore

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<li class="file-stats">

<a href="#1d2890ccc6f31c6d4f30a94a677ef21cf214f0f4">

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+

.pullapprove.yml

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</a>

</li>

<li class="file-stats">

<a href="#dea01dd89a3b602828e630677fde5d77c06441c8">

.travis.yml

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</li>

<li class="file-stats">

<a href="#6651ddff6eb82c840ced7c1dddee15c6e1913dd4">

Dockerfile

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<li class="file-stats">

<a href="#79b82ce9b64a924266619555502f890dd80c83b9">

<span class="new-file">

+

LICENSE.txt

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<li class="file-stats">

<a href="#8ec9a00bfd09b3190ac6b22251dbb1aa95a0579d">

README.md

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</li>

<li class="file-stats">

<a href="#f07866736216be0ee2aba49e392191aeae700a35">

build.gradle

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</li>

<li class="file-stats">

<a href="#fbe448ebfc3eb2d4e308f6b8b043666f5b57235e">

gradle/wrapper/gradle-wrapper.properties

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<li class="file-stats">

<a href="#05efc8b1657769a27696d478ded1e95f38737233">

settings.gradle

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<li class="file-stats">

<a href="#6303e4e5f50dc087084890bd916d3dd0c44283e8">

src/main/java/picard/Test.java

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<li class="file-stats">

<a href="#025d792d6ca480e8aa317c5d5200191baa96e8b1">

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+

src/main/java/picard/analysis/AbstractWgsMetricsCollector.java

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<li class="file-stats">

<a href="#bac4c9ac8d5063b8b48c84e1a30915ee1d4b4523">

src/main/java/picard/analysis/AlignmentSummaryMetrics.java

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<li class="file-stats">

<a href="#39ad2a42470243aa1402488d16e8309995fc1180">

src/main/java/picard/analysis/AlignmentSummaryMetricsCollector.java

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<li class="file-stats">

<a href="#3a02115cc24686ccecd94ec7f340c5890a553d38">

src/main/java/picard/analysis/CollectAlignmentSummaryMetrics.java

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<li class="file-stats">

<a href="#8d7507e76526876f60daef574438762bd6f57ab0">

src/main/java/picard/analysis/CollectBaseDistributionByCycle.java

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</li>

<li class="file-stats">

<a href="#39018791387cf476a9ea4511dd7a82d4982e3c05">

src/main/java/picard/analysis/CollectGcBiasMetrics.java

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<li class="file-stats">

<a href="#a8427986ca1c000c6402307f4ef77043d503630e">

src/main/java/picard/analysis/CollectInsertSizeMetrics.java

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<li class="file-stats">

<a href="#5a50cf7890c2934c93d21101ade49bf5551587ea">

src/main/java/picard/analysis/CollectJumpingLibraryMetrics.java

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<li class="file-stats">

<a href="#2269f0b41b877093e5ef84c96198be511137ddbc">

src/main/java/picard/analysis/CollectMultipleMetrics.java

</a>

</li>

<li class="file-stats">

<a href="#c224cce9721892da1834c94773de15da5dd22df4">

src/main/java/picard/analysis/CollectOxoGMetrics.java

</a>

</li>

<li class="file-stats">

<a href="#b2834490f63ed514ea04878a07bfeb9a3745de6c">

src/main/java/picard/analysis/CollectQualityYieldMetrics.java

</a>

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<li class="file-stats">

<a href="#bd1790f1783da7252384ebb46fb793aebd94697f">

src/main/java/picard/analysis/CollectRawWgsMetrics.java

</a>

</li>

<li class="file-stats">

<a href="#ef73529293175de94b68d4817a681e5643b34dd8">

src/main/java/picard/analysis/CollectRnaSeqMetrics.java

</a>

</li>

<li class="file-stats">

<a href="#13f54df4e2b29414eecb5c0cbc1da4d3e02dc14e">

src/main/java/picard/analysis/CollectRrbsMetrics.java

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</li>

<li class="file-stats">

<a href="#ef17ffbbef833877458003eb2f12fc07610dfc1e">

src/main/java/picard/analysis/CollectWgsMetrics.java

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</li>

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<h5>The diff was not included because it is too large.</h5>

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