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<h3>
Andreas Tille pushed to branch master
at <a href="https://salsa.debian.org/med-team/diamond-aligner">Debian Med / diamond-aligner</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/diamond-aligner/commit/919afe9905e1d9022d1b8c76a00b9e4e7cc9d52d">919afe99</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2018-04-26T15:09:58+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">New upstream version 0.9.21+dfsg</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/diamond-aligner/commit/4976127b50a135a6e9db6b23224ce4269fe5ac83">4976127b</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2018-04-26T15:09:59+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Update upstream source from tag 'upstream/0.9.21+dfsg'
Update to upstream version '0.9.21+dfsg'
with Debian dir 335ac4d48e9ded36917cc29156182a4e4abe4250</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/diamond-aligner/commit/f38d182467daced978e6d7a4de55955ca3803ad4">f38d1824</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2018-04-26T15:09:59+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">New upstream version
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/diamond-aligner/commit/a34b6621f5b80d21bace5cc4a7a734ded017a2de">a34b6621</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2018-04-26T15:10:06+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Point Vcs fields to salsa.debian.org
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/diamond-aligner/commit/daf111f53a54b2438d7466d9bcb55b73cf1d707b">daf111f5</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2018-04-26T15:10:07+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Standards-Version: 4.1.4
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/diamond-aligner/commit/a32884a5592f3d36d072564909f7822a496da2af">a32884a5</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2018-04-26T15:13:19+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Upload to unstable
</pre>
</li>
</ul>
<h4>30 changed files:</h4>
<ul>
<li class="file-stats">
<a href="#a5cc2925ca8258af241be7e5b0381edf30266302">
.gitignore
</a>
</li>
<li class="file-stats">
<a href="#9a2aa4db38d3115ed60da621e012c0efc0172aae">
CMakeLists.txt
</a>
</li>
<li class="file-stats">
<a href="#6651ddff6eb82c840ced7c1dddee15c6e1913dd4">
<span class="new-file">
+
Dockerfile
</span>
</a>
</li>
<li class="file-stats">
<a href="#561b88e19de321ca62c7590bbb350765fb110905">
README.rst
</a>
</li>
<li class="file-stats">
<a href="#cd089ae45ce870c45e434019e8f1ed4f066cd425">
<span class="deleted-file">
−
_config.yml
</span>
</a>
</li>
<li class="file-stats">
<a href="#32d9e95f00ee666c09c6aa675993f5e25887ecaa">
build_simple.sh
</a>
</li>
<li class="file-stats">
<a href="#9c96da0e9f91d7d8937b69b524702c106258f0d1">
debian/changelog
</a>
</li>
<li class="file-stats">
<a href="#58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2">
debian/control
</a>
</li>
<li class="file-stats">
<a href="#ba308c53c268704c3008f5e2e6e8129f9f6bf3fe">
src/ChangeLog
</a>
</li>
<li class="file-stats">
<a href="#76d5a97c09cca591280144de40f9c04a5ec57ef7">
src/basic/basic.cpp
</a>
</li>
<li class="file-stats">
<a href="#fe8c534c15ea9cf93547993244c3ab903c4895ff">
src/basic/config.cpp
</a>
</li>
<li class="file-stats">
<a href="#79a175a8b141cc4f06683108fcd39b79a555f1cd">
src/basic/config.h
</a>
</li>
<li class="file-stats">
<a href="#da280a51d91809345347036c4e31920b2c744ab7">
src/basic/const.h
</a>
</li>
<li class="file-stats">
<a href="#3acb533977ddcbc123b4fc5fa6a1f7d171564189">
src/basic/reduction.h
</a>
</li>
<li class="file-stats">
<a href="#689ab503b8a95eba671e19a8c7ce2bc890fbc058">
src/basic/seed_iterator.h
</a>
</li>
<li class="file-stats">
<a href="#eeb9c797e717eb3e4f468bca3e84923ae3c9a8db">
src/basic/shape.h
</a>
</li>
<li class="file-stats">
<a href="#d1d2ba256c4329ff664d58fbab99b8c6c1002067">
src/basic/shape_config.h
</a>
</li>
<li class="file-stats">
<a href="#02748963ebfdb263f232fa8cc7afc742d6771e86">
src/basic/statistics.h
</a>
</li>
<li class="file-stats">
<a href="#44bd35630fcea8d64717239d4408e33f330b31b5">
src/data/frequent_seeds.cpp
</a>
</li>
<li class="file-stats">
<a href="#c031a2c7ef48b61e3ca4b09e23214c4199242517">
src/data/frequent_seeds.h
</a>
</li>
<li class="file-stats">
<a href="#4c75bd371ff8a5ac8f8c6c03800a0d197a6baf78">
src/data/reference.cpp
</a>
</li>
<li class="file-stats">
<a href="#8366fdef1b3e7c06b4325bf704ef6a9a25477168">
<span class="new-file">
+
src/data/seed_array.cpp
</span>
</a>
</li>
<li class="file-stats">
<a href="#4d74b3b7d5a1f59aa02245bde00681d093e8d8a3">
<span class="new-file">
+
src/data/seed_array.h
</span>
</a>
</li>
<li class="file-stats">
<a href="#9c37c4df093936b94df7b27d0cbb7131fc65f410">
src/data/seed_histogram.cpp
</a>
</li>
<li class="file-stats">
<a href="#ba1fe9d599e92a9d975e18977693af394d3b027a">
src/data/seed_histogram.h
</a>
</li>
<li class="file-stats">
<a href="#e5e8b7750c545f0ef36aceeddc714113e4dff0b0">
src/data/sequence_set.h
</a>
</li>
<li class="file-stats">
<a href="#16635972c382ed827f2d64ccde2e6e3c945996d2">
src/data/sorted_list.h
</a>
</li>
<li class="file-stats">
<a href="#aa612a337fc66ae885c76e4eb2a819dfd69117f8">
src/run/double_indexed.cpp
</a>
</li>
<li class="file-stats">
<a href="#3550d99932a84c79895ecbcd490f1998f4cd963e">
src/run/main.cpp
</a>
</li>
<li class="file-stats">
<a href="#bd735448b4c157cfe3470c9dca2a5f97ef2682db">
src/run/tools.cpp
</a>
</li>
</ul>
<h5>The diff was not included because it is too large.</h5>
</div>
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<p style="font-size: small; color: #777;">
—
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