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<h3>
Andreas Tille pushed to branch master
at <a href="https://salsa.debian.org/med-team/fastqc">Debian Med / fastqc</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/fastqc/commit/b6243635024d751300753baa2eda53f96158c4b3">b6243635</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2018-04-27T07:10:28+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Standards-Version: 4.1.4
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/fastqc/commit/61fed7473d703b97204a965238416c42f342764f">61fed747</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2018-04-27T07:10:31+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Point Vcs-fields to Salsa
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/fastqc/commit/b8997bd9af6ee3ef72c280e03a563759cf3a6924">b8997bd9</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2018-04-27T07:10:46+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">debhelper 11
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/fastqc/commit/e44fa63660d9da6efb02bc1563c7f56332872072">e44fa636</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2018-04-27T07:12:10+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Depends: libfindbin-libs-perl
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/fastqc/commit/5217dc97404477201198f39e6b64f0bf2fd6995e">5217dc97</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2018-04-27T07:12:46+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Drop alternative Depends: java7-runtime
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/fastqc/commit/a1c88f814bd20be8e68bfbc10cba18db6573e29a">a1c88f81</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2018-04-27T07:21:44+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Fix changelog
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/fastqc/commit/09bd0cdb2d61f788b123118397051a183253e667">09bd0cdb</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2018-04-27T07:23:00+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Upstream moved to Github
</pre>
</li>
</ul>
<h4>4 changed files:</h4>
<ul>
<li class="file-stats">
<a href="#9c96da0e9f91d7d8937b69b524702c106258f0d1">
debian/changelog
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<li class="file-stats">
<a href="#78fd675df1cf8c2d4c62ae1a9a912d15c8c50ba4">
debian/compat
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<li class="file-stats">
<a href="#58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2">
debian/control
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<li class="file-stats">
<a href="#68ef9f98c01c7eecd4c605cc26048a06f3304b79">
debian/watch
</a>
</li>
</ul>
<h4>Changes:</h4>
<li id="9c96da0e9f91d7d8937b69b524702c106258f0d1">
<a href="https://salsa.debian.org/med-team/fastqc/compare/76bb8d84ca3629d93585f4d44baac61c0ed80d2f...09bd0cdb2d61f788b123118397051a183253e667#9c96da0e9f91d7d8937b69b524702c106258f0d1"><strong>debian/changelog</strong></a>
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<td class="line_content noteable_line" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC1" class="line" lang="plaintext">fastqc (0.11.5+dfsg-7) UNRELEASED; urgency=medium</span>
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<pre style="margin: 0;"> <span id="LC2" class="line" lang="plaintext"></span>
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<pre style="margin: 0;">-<span id="LC3" class="line" lang="plaintext"> * debian/upstream/metadata: RRID -> SciCrunch</span>
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<pre style="margin: 0;">-<span id="LC4" class="line" lang="plaintext"></span>
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<pre style="margin: 0;">-<span id="LC5" class="line" lang="plaintext"> -- Steffen Moeller <moeller@debian.org> Sun, 22 Oct 2017 00:40:27 +0200</span>
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<pre style="margin: 0;">-<span id="LC6" class="line" lang="plaintext"></span>
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<pre style="margin: 0;">-<span id="LC7" class="line" lang="plaintext">fastqc (0.11.5+dfsg-7) unstable; urgency=medium</span>
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<pre style="margin: 0;">-<span id="LC8" class="line" lang="plaintext"></span>
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<pre style="margin: 0;">+<span id="LC3" class="line" lang="plaintext"> [ Steffen Moeller ]</span>
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<pre style="margin: 0;"> <span id="LC4" class="line" lang="plaintext"> * debian/upstream/metadata: Added references to </span>
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<pre style="margin: 0;">-<span id="LC10" class="line" lang="plaintext"> OMICtools, <span class="idiff left right">RRID</span>, bio.tools registries</span>
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<pre style="margin: 0;">+<span id="LC5" class="line" lang="plaintext"> OMICtools, <span class="idiff left right">SciCrunch</span>, bio.tools registries</span>
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<pre style="margin: 0;"> <span id="LC6" class="line" lang="plaintext"></span>
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<pre style="margin: 0;">-<span id="LC12" class="line" lang="plaintext"> -- Steffen Moeller <moeller@debian.org> Sat, 22 Jul 2017 10:47:59 +0200</span>
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<pre style="margin: 0;">+<span id="LC7" class="line" lang="plaintext"> [ Andreas Tille ]</span>
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<td class="diff-line-num new new_line" data-linenumber="8" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC8" class="line" lang="plaintext"> * Standards-Version: 4.1.4</span>
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<pre style="margin: 0;">+<span id="LC9" class="line" lang="plaintext"> * Point Vcs-fields to Salsa</span>
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<pre style="margin: 0;">+<span id="LC10" class="line" lang="plaintext"> * debhelper 11</span>
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<pre style="margin: 0;">+<span id="LC11" class="line" lang="plaintext"> * Depends: libfindbin-libs-perl</span>
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<pre style="margin: 0;">+<span id="LC12" class="line" lang="plaintext"> Closes: #896931</span>
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<pre style="margin: 0;">+<span id="LC13" class="line" lang="plaintext"> * Drop alternative Depends: java7-runtime</span>
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<pre style="margin: 0;">+<span id="LC14" class="line" lang="plaintext"></span>
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<pre style="margin: 0;">+<span id="LC15" class="line" lang="plaintext"> -- Andreas Tille <tille@debian.org> Fri, 27 Apr 2018 07:14:43 +0200</span>
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<pre style="margin: 0;"> <span id="LC16" class="line" lang="plaintext"></span>
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<pre style="margin: 0;"> <span id="LC17" class="line" lang="plaintext">fastqc (0.11.5+dfsg-6) unstable; urgency=medium</span>
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<pre style="margin: 0;"> <span id="LC18" class="line" lang="plaintext"></span>
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<a href="https://salsa.debian.org/med-team/fastqc/compare/76bb8d84ca3629d93585f4d44baac61c0ed80d2f...09bd0cdb2d61f788b123118397051a183253e667#78fd675df1cf8c2d4c62ae1a9a912d15c8c50ba4"><strong>debian/compat</strong></a>
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<pre style="margin: 0;">-<span id="LC1" class="line" lang="plaintext">1<span class="idiff left right">0</span></span></pre>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="plaintext">1<span class="idiff left right">1</span></span></pre>
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<a href="https://salsa.debian.org/med-team/fastqc/compare/76bb8d84ca3629d93585f4d44baac61c0ed80d2f...09bd0cdb2d61f788b123118397051a183253e667#58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2"><strong>debian/control</strong></a>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -5,16 +5,16 @@ Uploaders: Steffen Moeller <moeller@debian.org>,</td>
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<pre style="margin: 0;"> <span id="LC5" class="line" lang="plaintext"> Olivier Sallou <osallou@debian.org></span>
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<pre style="margin: 0;"> <span id="LC6" class="line" lang="plaintext">Section: science</span>
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<pre style="margin: 0;"> <span id="LC7" class="line" lang="plaintext">Priority: optional</span>
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<pre style="margin: 0;">-<span id="LC8" class="line" lang="plaintext">Build-Depends: debhelper (>= 1<span class="idiff left right">0</span>),</span>
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<pre style="margin: 0;">+<span id="LC8" class="line" lang="plaintext">Build-Depends: debhelper (>= 1<span class="idiff left right">1~</span>),</span>
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<pre style="margin: 0;"> <span id="LC9" class="line" lang="plaintext"> javahelper,</span>
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<pre style="margin: 0;"> <span id="LC10" class="line" lang="plaintext"> default-jdk,</span>
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<pre style="margin: 0;"> <span id="LC11" class="line" lang="plaintext"> ant,</span>
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<pre style="margin: 0;"> <span id="LC12" class="line" lang="plaintext"> libhtsjdk-java,</span>
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<pre style="margin: 0;"> <span id="LC13" class="line" lang="plaintext"> libjbzip2-java,</span>
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<pre style="margin: 0;"> <span id="LC14" class="line" lang="plaintext"> libcommons-math3-java</span>
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<pre style="margin: 0;">-<span id="LC15" class="line" lang="plaintext">Standards-Version: <span class="idiff left right">3.9.8</span></span>
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<pre style="margin: 0;">-<span id="LC16" class="line" lang="plaintext">Vcs-Browser: https://<span class="idiff left right">anonscm.debian.org/cgit/debian-med/fastqc.git</span></span>
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<pre style="margin: 0;">-<span id="LC17" class="line" lang="plaintext">Vcs-Git: https://<span class="idiff left right">anonscm.debian.org/git/debian-med</span>/fastqc.git</span>
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<pre style="margin: 0;">+<span id="LC15" class="line" lang="plaintext">Standards-Version: <span class="idiff left right">4.1.4</span></span>
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<pre style="margin: 0;">+<span id="LC16" class="line" lang="plaintext">Vcs-Browser: https://<span class="idiff left right">salsa.debian.org/med-team/fastqc</span></span>
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<pre style="margin: 0;">+<span id="LC17" class="line" lang="plaintext">Vcs-Git: https://<span class="idiff left right">salsa.debian.org/med-team</span>/fastqc.git</span>
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<pre style="margin: 0;"> <span id="LC18" class="line" lang="plaintext">Homepage: http://www.bioinformatics.babraham.ac.uk/projects/fastqc/</span>
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<pre style="margin: 0;"> <span id="LC19" class="line" lang="plaintext"></span>
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<pre style="margin: 0;"> <span id="LC20" class="line" lang="plaintext">Package: fastqc</span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -24,7 +24,8 @@ Depends: ${misc:Depends},</td>
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<pre style="margin: 0;"> <span id="LC24" class="line" lang="plaintext"> libhtsjdk-java,</span>
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<pre style="margin: 0;"> <span id="LC25" class="line" lang="plaintext"> libjbzip2-java,</span>
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<pre style="margin: 0;"> <span id="LC26" class="line" lang="plaintext"> libcommons-math3-java,</span>
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<pre style="margin: 0;">-<span id="LC27" class="line" lang="plaintext"> default-jre | java7-runtime</span>
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<pre style="margin: 0;">+<span id="LC27" class="line" lang="plaintext"> libfindbin-libs-perl,</span>
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<pre style="margin: 0;">+<span id="LC28" class="line" lang="plaintext"> default-jre</span>
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<pre style="margin: 0;"> <span id="LC29" class="line" lang="plaintext">Description: quality control for high throughput sequence data</span>
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<pre style="margin: 0;"> <span id="LC30" class="line" lang="plaintext"> FastQC aims to provide a simple way to do some quality control checks on</span>
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<pre style="margin: 0;"> <span id="LC31" class="line" lang="plaintext"> raw sequence data coming from high throughput sequencing pipelines. It</span>
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<pre style="margin: 0;"> <span id="LC1" class="line" lang="plaintext">version=4</span>
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<pre style="margin: 0;"> <span id="LC2" class="line" lang="plaintext">opts="repacksuffix=+dfsg,dversionmangle=s/\+dfsg//g,repack,compression=xz" \</span>
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<pre style="margin: 0;">-<span id="LC3" class="line" lang="plaintext"> http<span class="idiff left right">://www.bioinformatics.babraham.ac.uk/projects/download.html fastqc/fastqc_v([.\d]+)_source\.zip</span></span></pre>
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<pre style="margin: 0;">+<span id="LC3" class="line" lang="plaintext"> http<span class="idiff left right">s://github.com/s-andrews/FastQC/releases .*/archive/v@ANY_VERSION@@ARCHIVE_EXT@</span></span></pre>
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