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<h3>
Andreas Tille pushed to branch upstream
at <a href="https://salsa.debian.org/med-team/seaview">Debian Med / seaview</a>
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<h4>
Commits:
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<strong><a href="https://salsa.debian.org/med-team/seaview/commit/a0b9b418e62412d7cbd21fa38131eebe125af31d">a0b9b418</a></strong>
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<span>by Andreas Tille</span>
<i>at 2018-04-27T17:20:33+02:00</i>
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<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">New upstream version 4.6.5</pre>
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<h4>8 changed files:</h4>
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<li class="file-stats">
<a href="#836efb6e25a091dcb4ff8e1dbb2f0be6a5cbf14c">
Makefile
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<a href="#69e27356ef629022720d868ab0c0e3394775b6c1">
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README
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<li class="file-stats">
<a href="#76bf38ca597ef85de7dfd163ba08b1912a17d286">
concatenate.cxx
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<li class="file-stats">
<a href="#38f1183ab5c0e21625128a997667dd366b136fa2">
csrc/parser.h
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<a href="#45cc856bb01edcdbf63fe3f71fe0a88efa118590">
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example.nxs
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<a href="#52273abf25871d8fe4213e1c91f4ad2bf44aa78c">
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−
seaview.appdata.xml
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<li class="file-stats">
<a href="#f4db9ac97fe81532a06eccd693e2dca4aced5c41">
seaview.cxx
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<li class="file-stats">
<a href="#8e243f34391f295535f892f8860929f4088e3e78">
seaview.html
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<h4>Changes:</h4>
<li id="836efb6e25a091dcb4ff8e1dbb2f0be6a5cbf14c">
<a href="https://salsa.debian.org/med-team/seaview/commit/a0b9b418e62412d7cbd21fa38131eebe125af31d#836efb6e25a091dcb4ff8e1dbb2f0be6a5cbf14c"><strong>Makefile</strong></a>
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<td class="diff-line-num unfold js-unfold new_line" data-linenumber="21" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -21,7 +21,7 @@</td>
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<pre style="margin: 0;"> <span id="LC21" class="line" lang="make"><span class="nv" style="color: teal;">CONFIG</span> <span class="o" style="font-weight: 600;">?=</span> fltk-config</span>
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<td class="diff-line-num old_line" data-linenumber="22" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC22" class="line" lang="make"><span class="nv" style="color: teal;">PDF_PS_FLAGS</span> <span class="o" style="font-weight: 600;">?=</span> <span class="nt" style="color: navy;">-DNO_PDF</span></span>
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<td class="line_content noteable_line" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC23" class="line" lang="make"></span>
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<pre style="margin: 0;">-<span id="LC24" class="line" lang="make"><span class="nv" style="color: teal;">EXTRALIBS</span> <span class="o" style="font-weight: 600;">=</span> <span class="sb" style="color: #d14;">`</span><span class="nv" style="color: teal;">$(CONFIG)</span> <span class="nt" style="color: navy;">--use-images</span> <span class="nt" style="color: navy;">--ldflags</span><span class="sb" style="color: #d14;">`</span><span class="idiff left"> </span><span class="nt" style="color: navy;"><span class="idiff">-ldl</span></span><span class="idiff"> </span><span class="nt" style="color: navy;"><span class="idiff">-lpthread</span></span><span class="idiff"> </span><span class="nt" style="color: navy;"><span class="idiff right">-lz</span></span></span>
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<pre style="margin: 0;">+<span id="LC24" class="line" lang="make"><span class="nv" style="color: teal;">EXTRALIBS</span> <span class="o" style="font-weight: 600;">=</span> <span class="sb" style="color: #d14;">`</span><span class="nv" style="color: teal;">$(CONFIG)</span> <span class="nt" style="color: navy;">--use-images</span> <span class="nt" style="color: navy;">--ldflags</span><span class="sb" style="color: #d14;">`</span></span>
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<td class="line_content noteable_line" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC25" class="line" lang="make"></span>
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<pre style="margin: 0;"> <span id="LC26" class="line" lang="make"><span class="nv" style="color: teal;">CC</span> <span class="o" style="font-weight: 600;">=</span> gcc</span>
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<pre style="margin: 0;"> <span id="LC27" class="line" lang="make"><span class="nv" style="color: teal;">CXX</span> <span class="o" style="font-weight: 600;">=</span> g++</span>
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<li id="69e27356ef629022720d868ab0c0e3394775b6c1">
<a href="https://salsa.debian.org/med-team/seaview/commit/a0b9b418e62412d7cbd21fa38131eebe125af31d#69e27356ef629022720d868ab0c0e3394775b6c1"><strong>README</strong>
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<pre style="margin: 0;">-<span id="LC1" class="line" lang="plaintext"> HOW TO COMPILE SEAVIEW ON UNIX/LINUX SYSTEMS</span>
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<pre style="margin: 0;">-<span id="LC2" class="line" lang="plaintext"></span>
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<pre style="margin: 0;">-<span id="LC3" class="line" lang="plaintext">The seaview program requires the FLTK library for its graphical user interface.</span>
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<pre style="margin: 0;">-<span id="LC4" class="line" lang="plaintext">Version 1.3.0 or later of FLTK is necessary.</span>
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<pre style="margin: 0;">-<span id="LC5" class="line" lang="plaintext"></span>
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<pre style="margin: 0;">-<span id="LC6" class="line" lang="plaintext">The FLTK library is available as packages for a number of Linux distributions.</span>
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<pre style="margin: 0;">-<span id="LC7" class="line" lang="plaintext">If this package is installed on your system, go to step II.</span>
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<pre style="margin: 0;">-<span id="LC8" class="line" lang="plaintext">If no such package is available for your system, or if version 1.3.0 is not available,</span>
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<pre style="margin: 0;">-<span id="LC9" class="line" lang="plaintext">or if you don't want to use such package, you can compile the FLTK library as follows.</span>
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<pre style="margin: 0;">-<span id="LC10" class="line" lang="plaintext"></span>
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<pre style="margin: 0;">-<span id="LC11" class="line" lang="plaintext">I COMPILING THE FLTK LIBRARY FROM SOURCE</span>
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<pre style="margin: 0;">-<span id="LC12" class="line" lang="plaintext">========================================</span>
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<pre style="margin: 0;">-<span id="LC13" class="line" lang="plaintext"></span>
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<pre style="margin: 0;">-<span id="LC14" class="line" lang="plaintext">The source code of the FLTK library is available at the "Download" item of http://www.fltk.org/.</span>
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<pre style="margin: 0;">-<span id="LC15" class="line" lang="plaintext">- Get the stable release source archive, currently fltk-1.3.3-source.tar.gz</span>
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<pre style="margin: 0;">-<span id="LC16" class="line" lang="plaintext">- Compile the FLTK library on your system:</span>
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<pre style="margin: 0;">-<span id="LC17" class="line" lang="plaintext"> cd fltk-1.3.3</span>
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<pre style="margin: 0;">-<span id="LC18" class="line" lang="plaintext"> ./configure</span>
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<pre style="margin: 0;">-<span id="LC19" class="line" lang="plaintext"> make</span>
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<pre style="margin: 0;">-<span id="LC20" class="line" lang="plaintext">It's not necessary to do "make install".</span>
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<pre style="margin: 0;">-<span id="LC21" class="line" lang="plaintext"></span>
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<pre style="margin: 0;">-<span id="LC22" class="line" lang="plaintext">II COMPILING THE SEAVIEW PROGRAM</span>
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<pre style="margin: 0;">-<span id="LC23" class="line" lang="plaintext">================================</span>
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<pre style="margin: 0;">-<span id="LC24" class="line" lang="plaintext"></span>
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<pre style="margin: 0;">-<span id="LC25" class="line" lang="plaintext">First unpack the seaview source archive (seaview.tar.gz).</span>
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<pre style="margin: 0;">-<span id="LC26" class="line" lang="plaintext"></span>
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<pre style="margin: 0;">-<span id="LC27" class="line" lang="plaintext">IIa Preparing the seaview makefile</span>
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<pre style="margin: 0;">-<span id="LC28" class="line" lang="plaintext"></span>
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<pre style="margin: 0;">-<span id="LC29" class="line" lang="plaintext">If the FLTK library is installed on your system (i.e., include files in /usr/include/FL,</span>
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<pre style="margin: 0;">-<span id="LC30" class="line" lang="plaintext">and libraries at /usr/lib/libfltk*), go to step IIb.</span>
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<pre style="margin: 0;">-<span id="LC31" class="line" lang="plaintext">Otherwise, edit Makefile from the seaview source directory which contains these 5 lines:</span>
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<pre style="margin: 0;">-<span id="LC32" class="line" lang="plaintext">#to use your own, uninstalled FLTK library,</span>
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<pre style="margin: 0;">-<span id="LC33" class="line" lang="plaintext">#uncomment the next 3 lines and adapt the 1st to your local file system </span>
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<pre style="margin: 0;">-<span id="LC34" class="line" lang="plaintext">#FLTK = $(HOME)/fltk-1.3</span>
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<pre style="margin: 0;">-<span id="LC35" class="line" lang="plaintext">#IFLTK = -I$(FLTK)</span>
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<pre style="margin: 0;">-<span id="LC36" class="line" lang="plaintext">#CONFIG = $(FLTK)/fltk-config</span>
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<pre style="margin: 0;">-<span id="LC37" class="line" lang="plaintext"></span>
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<pre style="margin: 0;">-<span id="LC38" class="line" lang="plaintext">Transform these lines into:</span>
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<pre style="margin: 0;">-<span id="LC39" class="line" lang="plaintext">#to use your own, uninstalled FLTK library,</span>
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<pre style="margin: 0;">-<span id="LC40" class="line" lang="plaintext">#uncomment the next 3 lines and adapt the 1st to your local file system </span>
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<pre style="margin: 0;">-<span id="LC41" class="line" lang="plaintext">FLTK = $(HOME)/fltk-1.3</span>
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<pre style="margin: 0;">-<span id="LC42" class="line" lang="plaintext">IFLTK = -I$(FLTK)</span>
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<pre style="margin: 0;">-<span id="LC43" class="line" lang="plaintext">CONFIG = $(FLTK)/fltk-config</span>
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<pre style="margin: 0;">-<span id="LC44" class="line" lang="plaintext">and also change the FLTK = $(HOME)/fltk-1.3 line so it gives the location in your system</span>
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<pre style="margin: 0;">-<span id="LC45" class="line" lang="plaintext">of the top of the FLTK source tree.</span>
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<pre style="margin: 0;">-<span id="LC46" class="line" lang="plaintext"></span>
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<pre style="margin: 0;">-<span id="LC47" class="line" lang="plaintext">IIb Compile/link the seaview program</span>
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<pre style="margin: 0;">-<span id="LC48" class="line" lang="plaintext"></span>
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<pre style="margin: 0;">-<span id="LC49" class="line" lang="plaintext">In the seaview source directory, run</span>
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<pre style="margin: 0;">-<span id="LC50" class="line" lang="plaintext">make</span>
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<pre style="margin: 0;">-<span id="LC51" class="line" lang="plaintext"></span>
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<pre style="margin: 0;">-<span id="LC52" class="line" lang="plaintext">III Install seaview external programs</span>
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<pre style="margin: 0;">-<span id="LC53" class="line" lang="plaintext">=====================================</span>
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<pre style="margin: 0;">-<span id="LC54" class="line" lang="plaintext"></span>
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<pre style="margin: 0;">-<span id="LC55" class="line" lang="plaintext">Seaview drives 4 external programs (clustalo, muscle, Gblocks, phyml). Linux executables</span>
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<pre style="margin: 0;">-<span id="LC56" class="line" lang="plaintext">of these are available from the linux items of http://pbil.univ-lyon1.fr/software/seaview.html</span>
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<pre style="margin: 0;">-<span id="LC57" class="line" lang="plaintext">They are also available as packages of most Linux distributions.</span>
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<pre style="margin: 0;">-<span id="LC58" class="line" lang="plaintext"></span>
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<pre style="margin: 0;">-<span id="LC59" class="line" lang="plaintext">These programs should be put in your PATH or in the same directory as the seaview</span>
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<pre style="margin: 0;">-<span id="LC60" class="line" lang="plaintext">executable for seaview to drive them.</span>
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<pre style="margin: 0;">-<span id="LC61" class="line" lang="plaintext"></span>
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<pre style="margin: 0;">-<span id="LC62" class="line" lang="plaintext">By default seaview searches for the phyml executable under the names PhyML-3.1_linux32</span>
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<pre style="margin: 0;">-<span id="LC63" class="line" lang="plaintext">or PhyML-3.1_linux64. If they are installed under other names on your system, seaview </span>
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<pre style="margin: 0;">-<span id="LC64" class="line" lang="plaintext">will ask you for their name and location which are remembered for subsequent runs.</span>
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<pre style="margin: 0;">-<span id="LC65" class="line" lang="plaintext"></span></pre>
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<a href="https://salsa.debian.org/med-team/seaview/commit/a0b9b418e62412d7cbd21fa38131eebe125af31d#76bf38ca597ef85de7dfd163ba08b1912a17d286"><strong>concatenate.cxx</strong></a>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -170,12 +170,31 @@ void do_concatenate_callback( Fl_Widget *ob, void *data)</td>
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<pre style="margin: 0;"> <span id="LC170" class="line" lang="cpp"> <span class="n" style="color: #333;">set_seaview_modified</span><span class="p">(</span><span class="n" style="color: #333;">target</span><span class="p">,</span> <span class="n" style="color: #333;">TRUE</span><span class="p">);</span></span>
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<pre style="margin: 0;"> <span id="LC171" class="line" lang="cpp"><span class="p">}</span></span>
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172
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<pre style="margin: 0;"> <span id="LC172" class="line" lang="cpp"></span>
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173
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<pre style="margin: 0;">+<span id="LC173" class="line" lang="cpp"><span class="kt" style="color: #458; font-weight: 600;">void</span> <span class="nf" style="color: #900; font-weight: 600;">store_concat_part_as_region</span><span class="p">(</span><span class="n" style="color: #333;">SEA_VIEW</span> <span class="o" style="font-weight: 600;">*</span><span class="n" style="color: #333;">target</span><span class="p">,</span> <span class="kt" style="color: #458; font-weight: 600;">char</span> <span class="o" style="font-weight: 600;">*</span><span class="n" style="color: #333;">name</span><span class="p">,</span> <span class="kt" style="color: #458; font-weight: 600;">int</span> <span class="n" style="color: #333;">from</span><span class="p">,</span> <span class="kt" style="color: #458; font-weight: 600;">int</span> <span class="n" style="color: #333;">to</span><span class="p">)</span></span>
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<pre style="margin: 0;">+<span id="LC174" class="line" lang="cpp"><span class="p">{</span></span>
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<pre style="margin: 0;">+<span id="LC175" class="line" lang="cpp"> <span class="n" style="color: #333;">list_segments</span> <span class="n" style="color: #333;">ls</span> <span class="o" style="font-weight: 600;">=</span> <span class="p">{</span><span class="n" style="color: #333;">from</span><span class="p">,</span> <span class="n" style="color: #333;">to</span><span class="p">,</span> <span class="nb" style="color: #0086b3;">NULL</span><span class="p">};</span></span>
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176
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<pre style="margin: 0;">+<span id="LC176" class="line" lang="cpp"> <span class="n" style="color: #333;">list_segments</span> <span class="o" style="font-weight: 600;">*</span><span class="n" style="color: #333;">pls</span> <span class="o" style="font-weight: 600;">=</span> <span class="k" style="font-weight: 600;">new</span> <span class="n" style="color: #333;">list_segments</span><span class="p">;</span> <span class="o" style="font-weight: 600;">*</span><span class="n" style="color: #333;">pls</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">ls</span><span class="p">;</span></span>
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177
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<pre style="margin: 0;">+<span id="LC177" class="line" lang="cpp"> <span class="n" style="color: #333;">region</span> <span class="o" style="font-weight: 600;">*</span><span class="n" style="color: #333;">r</span> <span class="o" style="font-weight: 600;">=</span> <span class="k" style="font-weight: 600;">new</span> <span class="n" style="color: #333;">region</span><span class="p">;</span></span>
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178
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<pre style="margin: 0;">+<span id="LC178" class="line" lang="cpp"> <span class="n" style="color: #333;">r</span><span class="o" style="font-weight: 600;">-></span><span class="n" style="color: #333;">name</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">strdup</span><span class="p">(</span><span class="n" style="color: #333;">extract_filename</span><span class="p">(</span><span class="n" style="color: #333;">name</span><span class="p">));</span></span>
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179
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<pre style="margin: 0;">+<span id="LC179" class="line" lang="cpp"> <span class="n" style="color: #333;">r</span><span class="o" style="font-weight: 600;">-></span><span class="n" style="color: #333;">list</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">pls</span><span class="p">;</span></span>
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180
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<pre style="margin: 0;">+<span id="LC180" class="line" lang="cpp"> <span class="n" style="color: #333;">list_regions</span> <span class="o" style="font-weight: 600;">*</span><span class="n" style="color: #333;">list</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">target</span><span class="o" style="font-weight: 600;">-></span><span class="n" style="color: #333;">regions</span><span class="p">;</span></span>
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181
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<pre style="margin: 0;">+<span id="LC181" class="line" lang="cpp"> <span class="n" style="color: #333;">list_regions</span> <span class="o" style="font-weight: 600;">*</span><span class="n" style="color: #333;">list2</span> <span class="o" style="font-weight: 600;">=</span> <span class="k" style="font-weight: 600;">new</span> <span class="n" style="color: #333;">list_regions</span><span class="p">;</span></span>
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182
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<pre style="margin: 0;">+<span id="LC182" class="line" lang="cpp"> <span class="n" style="color: #333;">list2</span><span class="o" style="font-weight: 600;">-></span><span class="n" style="color: #333;">element</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">r</span><span class="p">;</span></span>
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183
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<pre style="margin: 0;">+<span id="LC183" class="line" lang="cpp"> <span class="n" style="color: #333;">list2</span><span class="o" style="font-weight: 600;">-></span><span class="n" style="color: #333;">next</span> <span class="o" style="font-weight: 600;">=</span> <span class="nb" style="color: #0086b3;">NULL</span><span class="p">;</span></span>
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184
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<pre style="margin: 0;">+<span id="LC184" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">if</span> <span class="p">(</span><span class="n" style="color: #333;">list</span><span class="p">)</span> <span class="p">{</span></span>
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185
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<pre style="margin: 0;">+<span id="LC185" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">while</span> <span class="p">(</span><span class="n" style="color: #333;">list</span><span class="o" style="font-weight: 600;">-></span><span class="n" style="color: #333;">next</span><span class="p">)</span> <span class="n" style="color: #333;">list</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">list</span><span class="o" style="font-weight: 600;">-></span><span class="n" style="color: #333;">next</span><span class="p">;</span></span>
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186
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<pre style="margin: 0;">+<span id="LC186" class="line" lang="cpp"> <span class="n" style="color: #333;">list</span><span class="o" style="font-weight: 600;">-></span><span class="n" style="color: #333;">next</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">list2</span><span class="p">;</span></span>
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<pre style="margin: 0;">+<span id="LC187" class="line" lang="cpp"> <span class="p">}</span> <span class="k" style="font-weight: 600;">else</span> <span class="n" style="color: #333;">target</span><span class="o" style="font-weight: 600;">-></span><span class="n" style="color: #333;">regions</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">list2</span><span class="p">;</span></span>
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188
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<pre style="margin: 0;">+<span id="LC188" class="line" lang="cpp"><span class="p">}</span></span>
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189
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<pre style="margin: 0;"> <span id="LC189" class="line" lang="cpp"></span>
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174
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190
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<pre style="margin: 0;"> <span id="LC190" class="line" lang="cpp"><span class="kt" style="color: #458; font-weight: 600;">void</span> <span class="nf" style="color: #900; font-weight: 600;">concatenate_no_gui</span><span class="p">(</span><span class="kt" style="color: #458; font-weight: 600;">int</span> <span class="n" style="color: #333;">argc</span><span class="p">,</span> <span class="kt" style="color: #458; font-weight: 600;">char</span> <span class="o" style="font-weight: 600;">*</span><span class="n" style="color: #333;">argv</span><span class="p">[])</span></span>
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175
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191
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<pre style="margin: 0;"> <span id="LC191" class="line" lang="cpp"><span class="p">{</span></span>
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176
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192
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<pre style="margin: 0;"> <span id="LC192" class="line" lang="cpp"> <span class="kt" style="color: #458; font-weight: 600;">char</span> <span class="o" style="font-weight: 600;">*</span><span class="n" style="color: #333;">err_message</span><span class="p">;</span></span>
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177
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193
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<pre style="margin: 0;"> <span id="LC193" class="line" lang="cpp"> <span class="kt" style="color: #458; font-weight: 600;">bool</span> <span class="n" style="color: #333;">std_output</span> <span class="o" style="font-weight: 600;">=</span> <span class="nb" style="color: #0086b3;">false</span><span class="p">;</span></span>
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178
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194
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<pre style="margin: 0;"> <span id="LC194" class="line" lang="cpp"> <span class="n" style="color: #333;">SEA_VIEW</span> <span class="o" style="font-weight: 600;">*</span><span class="n" style="color: #333;">target</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">cmdline_read_input_alignment</span><span class="p">(</span><span class="n" style="color: #333;">argc</span><span class="p">,</span> <span class="n" style="color: #333;">argv</span><span class="p">);</span></span>
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<td class="diff-line-num new new_line" data-linenumber="195" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
195
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<pre style="margin: 0;">+<span id="LC195" class="line" lang="cpp"> <span class="kt" style="color: #458; font-weight: 600;">bool</span> <span class="n" style="color: #333;">record_partition</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">isarg</span><span class="p">(</span><span class="n" style="color: #333;">argc</span><span class="p">,</span> <span class="n" style="color: #333;">argv</span><span class="p">,</span> <span class="s" style="color: #d14;">"-record_partition"</span><span class="p">);</span></span>
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196
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<pre style="margin: 0;">+<span id="LC196" class="line" lang="cpp"></span>
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197
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<pre style="margin: 0;">+<span id="LC197" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">if</span> <span class="p">(</span><span class="n" style="color: #333;">record_partition</span><span class="p">)</span> <span class="n" style="color: #333;">store_concat_part_as_region</span><span class="p">(</span><span class="n" style="color: #333;">target</span><span class="p">,</span> <span class="n" style="color: #333;">argv</span><span class="p">[</span><span class="n" style="color: #333;">argc</span><span class="o" style="font-weight: 600;">-</span><span class="mi" style="color: #099;">1</span><span class="p">],</span> <span class="mi" style="color: #099;">1</span><span class="p">,</span> <span class="n" style="color: #333;">target</span><span class="o" style="font-weight: 600;">-></span><span class="n" style="color: #333;">seq_length</span><span class="p">);</span></span>
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179
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198
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<pre style="margin: 0;"> <span id="LC198" class="line" lang="cpp"> <span class="kt" style="color: #458; font-weight: 600;">char</span> <span class="o" style="font-weight: 600;">*</span><span class="n" style="color: #333;">all_sources</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">argname</span><span class="p">(</span><span class="n" style="color: #333;">argc</span><span class="p">,</span> <span class="n" style="color: #333;">argv</span><span class="p">,</span> <span class="s" style="color: #d14;">"-concatenate"</span><span class="p">);</span></span>
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180
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199
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<pre style="margin: 0;"> <span id="LC199" class="line" lang="cpp"> <span class="n" style="color: #333;">known_format</span> <span class="n" style="color: #333;">out_format</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">target</span><span class="o" style="font-weight: 600;">-></span><span class="n" style="color: #333;">format_for_save</span><span class="p">;</span></span>
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181
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200
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<pre style="margin: 0;"> <span id="LC200" class="line" lang="cpp"> </span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="184" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="203" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -184,7 +203,9 @@ void concatenate_no_gui(int argc, char *argv[])</td>
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184
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203
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<pre style="margin: 0;"> <span id="LC203" class="line" lang="cpp"> <span class="kt" style="color: #458; font-weight: 600;">bool</span> <span class="n" style="color: #333;">is_by_rank</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">isarg</span><span class="p">(</span><span class="n" style="color: #333;">argc</span><span class="p">,</span> <span class="n" style="color: #333;">argv</span><span class="p">,</span> <span class="s" style="color: #d14;">"-by_rank"</span><span class="p">);</span></span>
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185
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204
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<pre style="margin: 0;"> <span id="LC204" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">while</span> <span class="p">(</span><span class="n" style="color: #333;">source_name</span><span class="p">)</span> <span class="p">{</span></span>
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186
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205
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<pre style="margin: 0;"> <span id="LC205" class="line" lang="cpp"> <span class="n" style="color: #333;">SEA_VIEW</span> <span class="o" style="font-weight: 600;">*</span><span class="n" style="color: #333;">source</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">cmdline_read_input_alignment</span><span class="p">(</span><span class="mi" style="color: #099;">1</span><span class="p">,</span> <span class="o" style="font-weight: 600;">&</span><span class="n" style="color: #333;">source_name</span><span class="p">);</span></span>
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<td class="diff-line-num new new_line" data-linenumber="206" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
206
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<pre style="margin: 0;">+<span id="LC206" class="line" lang="cpp"> <span class="kt" style="color: #458; font-weight: 600;">int</span> <span class="n" style="color: #333;">old_length</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">target</span><span class="o" style="font-weight: 600;">-></span><span class="n" style="color: #333;">seq_length</span> <span class="o" style="font-weight: 600;">+</span> <span class="mi" style="color: #099;">1</span><span class="p">;</span></span>
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<td class="diff-line-num old_line" data-linenumber="187" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
187
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<td class="diff-line-num new_line" data-linenumber="207" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
207
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<pre style="margin: 0;"> <span id="LC207" class="line" lang="cpp"> <span class="n" style="color: #333;">concatenate</span><span class="p">(</span><span class="n" style="color: #333;">target</span><span class="p">,</span> <span class="n" style="color: #333;">source</span><span class="p">,</span> <span class="o" style="font-weight: 600;">!</span><span class="n" style="color: #333;">is_by_rank</span><span class="p">,</span> <span class="o" style="font-weight: 600;">!</span><span class="n" style="color: #333;">is_by_rank</span><span class="p">,</span> <span class="nb" style="color: #0086b3;">true</span><span class="p">);</span></span>
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<pre style="margin: 0;">+<span id="LC208" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">if</span> <span class="p">(</span><span class="n" style="color: #333;">record_partition</span><span class="p">)</span> <span class="n" style="color: #333;">store_concat_part_as_region</span><span class="p">(</span><span class="n" style="color: #333;">target</span><span class="p">,</span> <span class="n" style="color: #333;">source_name</span><span class="p">,</span> <span class="n" style="color: #333;">old_length</span><span class="p">,</span> <span class="n" style="color: #333;">target</span><span class="o" style="font-weight: 600;">-></span><span class="n" style="color: #333;">seq_length</span><span class="p">);</span></span>
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<pre style="margin: 0;"> <span id="LC209" class="line" lang="cpp"> <span class="n" style="color: #333;">source_name</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">strtok</span><span class="p">(</span><span class="nb" style="color: #0086b3;">NULL</span><span class="p">,</span> <span class="s" style="color: #d14;">","</span><span class="p">);</span></span>
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<pre style="margin: 0;"> <span id="LC210" class="line" lang="cpp"> <span class="p">}</span></span>
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<pre style="margin: 0;"> <span id="LC211" class="line" lang="cpp"> </span>
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<pre style="margin: 0;"> <span id="LC1" class="line" lang="c"><span class="cp" style="color: #999; font-weight: 600;">#include <stdlib.h></span></span>
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<pre style="margin: 0;"> <span id="LC2" class="line" lang="c"><span class="cp" style="color: #999; font-weight: 600;">#include <string.h></span></span>
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<pre style="margin: 0;"> <span id="LC3" class="line" lang="c"></span>
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<pre style="margin: 0;">-<span id="LC4" class="line" lang="c"><span class="k" style="font-weight: 600;">typedef</span> <span class="k" style="font-weight: 600;">struct</span> <span class="n" style="color: #333;">ThisReponse</span><span class="p">{</span></span>
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<pre style="margin: 0;">+<span id="LC4" class="line" lang="c"><span class="k" style="font-weight: 600;">typedef</span> <span class="k" style="font-weight: 600;">struct</span> <span class="n" style="color: #333;">ThisReponse</span><span class="idiff left right"> </span><span class="p">{</span></span>
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<pre style="margin: 0;"> <span id="LC5" class="line" lang="c"> </span>
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<pre style="margin: 0;"> <span id="LC6" class="line" lang="c"> <span class="kt" style="color: #458; font-weight: 600;">char</span> <span class="o" style="font-weight: 600;">**</span><span class="n" style="color: #333;">arg</span><span class="p">;</span> <span class="cm" style="color: #998; font-style: italic;">/* je stocke les arguments */</span></span>
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<pre style="margin: 0;"> <span id="LC7" class="line" lang="c"> <span class="kt" style="color: #458; font-weight: 600;">int</span> <span class="n" style="color: #333;">nbarguments</span><span class="p">;</span> <span class="cm" style="color: #998; font-style: italic;">/* je stocke le nombre d'arguments */</span></span>
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<pre style="margin: 0;">-<span id="LC1" class="line" lang="plaintext">#NEXUS</span>
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<pre style="margin: 0;">-<span id="LC2" class="line" lang="plaintext">[saved by seaview on Mon Mar 16 15:43:12 2009]</span>
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<pre style="margin: 0;">-<span id="LC3" class="line" lang="plaintext">BEGIN DATA;</span>
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<pre style="margin: 0;">-<span id="LC4" class="line" lang="plaintext"> DIMENSIONS NTAX=54 NCHAR=456;</span>
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<pre style="margin: 0;">-<span id="LC5" class="line" lang="plaintext"> FORMAT DATATYPE=DNA</span>
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<pre style="margin: 0;">-<span id="LC6" class="line" lang="plaintext"> GAP=-</span>
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<pre style="margin: 0;">-<span id="LC7" class="line" lang="plaintext"> ;</span>
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<pre style="margin: 0;">-<span id="LC8" class="line" lang="plaintext">MATRIX</span>
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<pre style="margin: 0;">-<span id="LC9" class="line" lang="plaintext">[1] D82069.PE1</span>
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<pre style="margin: 0;">-<span id="LC10" class="line" lang="plaintext">---------atgaagcctgaggaaatttcaagaggaaaagcttttggactgctgaaagcc</span>
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<pre style="margin: 0;">-<span id="LC11" class="line" lang="plaintext">caacaggaagagaggttggatgggatcaacaagcacttcctcgatgatcccaagtacagc</span>
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12
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<pre style="margin: 0;">-<span id="LC12" class="line" lang="plaintext">agtgatgaggatctgcagtccaaactggaggccttcaagacgaagtacatggagtttgat</span>
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13
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<pre style="margin: 0;">-<span id="LC13" class="line" lang="plaintext">ctgaatggcaatggagatatcgatattatgtccttgaagcgaatgctggagaaacttggg</span>
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14
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<pre style="margin: 0;">-<span id="LC14" class="line" lang="plaintext">gttcccaagacccatctagagctgaagaaattaattagagaggtgtccagtggctccgag</span>
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15
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<pre style="margin: 0;">-<span id="LC15" class="line" lang="plaintext">---gagacgttcagttactctgactttctcagaatgatgctgggcaagagatctgccatc</span>
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16
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<pre style="margin: 0;">-<span id="LC16" class="line" lang="plaintext">ttgagaatgattctgatgtatgaggagaaaaacaaagaacaccag---aagccaactggt</span>
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<td class="diff-line-num old old_line" data-linenumber="17" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
17
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC17" class="line" lang="plaintext">cccccagccaagaaagctatttctgagttgccctaa</span>
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<td class="diff-line-num old old_line" data-linenumber="18" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
18
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC18" class="line" lang="plaintext">[2] 'AB019540.AIF-1'</span>
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<td class="diff-line-num old old_line" data-linenumber="19" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
19
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC19" class="line" lang="plaintext">------------atggacagcacagctcaaggaggtaaagcatttggtcttctcaagtct</span>
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20
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<pre style="margin: 0;">-<span id="LC20" class="line" lang="plaintext">caccaggaagaaaaattgaactctatcaatgaggcttttctctcagatccccaatatgca</span>
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21
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<pre style="margin: 0;">-<span id="LC21" class="line" lang="plaintext">gaagaggaagacctcagctcaaagcttgaagcatttaaaaagaaatacatggagtttgat</span>
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22
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<pre style="margin: 0;">-<span id="LC22" class="line" lang="plaintext">cttaacgacaaaggagaaatagatattatgggtttgaaacggatgctggaaaaactcgga</span>
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23
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<pre style="margin: 0;">-<span id="LC23" class="line" lang="plaintext">ttggccaagactcacttggagctgaaaaagatgatgtcagaggtctgtggaggaacatcg</span>
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24
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<pre style="margin: 0;">-<span id="LC24" class="line" lang="plaintext">aaagaaactttcggctaccacgacttcctgaatatgatgctgggaaaaagaaatgcaatt</span>
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25
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<pre style="margin: 0;">-<span id="LC25" class="line" lang="plaintext">ctaaaactgatcttgatgtttgaaggcatgggaaaggagcacgagtccaaagatgcggca</span>
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26
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<pre style="margin: 0;">-<span id="LC26" class="line" lang="plaintext">ccacctcctcgcaaaaccttttcagacctgccctga</span>
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<td class="diff-line-num old old_line" data-linenumber="27" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
27
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<pre style="margin: 0;">-<span id="LC27" class="line" lang="plaintext">[3] AB000818.PE1</span>
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<td class="diff-line-num old old_line" data-linenumber="28" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
28
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<pre style="margin: 0;">-<span id="LC28" class="line" lang="plaintext">------atgagccagagcaaggatttgcagggaggaaaagcttttggactgctgaaagcc</span>
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29
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<pre style="margin: 0;">-<span id="LC29" class="line" lang="plaintext">cagcaggaagagaggttggatgggatcaacaagcacttcctcgatgatcccaagtacagc</span>
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30
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<pre style="margin: 0;">-<span id="LC30" class="line" lang="plaintext">agtgatgaggatctgcagtccaaactggaggccttcaagacgaagtacatggagtttgat</span>
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31
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<pre style="margin: 0;">-<span id="LC31" class="line" lang="plaintext">ctgaatggcaatggagatatcgatattatgtccttgaagcgaatgctggagaaacttggg</span>
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32
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC32" class="line" lang="plaintext">gttcccaagacccatctagagctgaagaaattaattagagaggtgtccagtggctccgag</span>
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33
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC33" class="line" lang="plaintext">---gagacgttcagttactctgactttctcagaatgatgctgggcaagagatctgccatc</span>
</pre>
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34
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC34" class="line" lang="plaintext">ttgagaatgattctgatgtatgaggagaaaaacaaagaacaccag---aagccaactggt</span>
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35
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC35" class="line" lang="plaintext">cccccagccaagaaagctatttctgagttgccctaa</span>
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<td class="diff-line-num old old_line" data-linenumber="36" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
36
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<pre style="margin: 0;">-<span id="LC36" class="line" lang="plaintext">[4] AB012309.PE1</span>
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<td class="diff-line-num old old_line" data-linenumber="37" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
37
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<pre style="margin: 0;">-<span id="LC37" class="line" lang="plaintext">------atgccttccaaccagaatttacaaggcgggaaagccttcgggttactcaaagca</span>
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38
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<pre style="margin: 0;">-<span id="LC38" class="line" lang="plaintext">cagcagagggagaagctggatgaaatcaataaggagtttatggaagatcagaagtaccgg</span>
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39
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<pre style="margin: 0;">-<span id="LC39" class="line" lang="plaintext">gatgaagaggatttgcaagagaagctagattcttttaaaaataaatatgctgagtttgac</span>
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40
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<pre style="margin: 0;">-<span id="LC40" class="line" lang="plaintext">ctgaacgatcagggggatatcgacatgatgggcttgaagcgaatgatggagaagttgggt</span>
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41
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<pre style="margin: 0;">-<span id="LC41" class="line" lang="plaintext">gtgccaaagactcacctggagatgaagaaaatgatctcagaggtgacaggaggttgcagc</span>
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42
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<pre style="margin: 0;">-<span id="LC42" class="line" lang="plaintext">---gacaccatcaactacagggactttgtgaaaatgatgcttggcaagcgatcagctgtt</span>
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43
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<pre style="margin: 0;">-<span id="LC43" class="line" lang="plaintext">ctcaaactggttatgatgtttgaagacaaagctaatgaggccagcggtaaacccgatgga</span>
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44
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<pre style="margin: 0;">-<span id="LC44" class="line" lang="plaintext">cccccacccaagcgtgacatcaccacccttccataa</span>
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45
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<pre style="margin: 0;">-<span id="LC45" class="line" lang="plaintext">[5] 'AB013745.AIF-1'</span>
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46
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<pre style="margin: 0;">-<span id="LC46" class="line" lang="plaintext">------atgagccaaagcagggatttgcagggaggaaaagcttttggactgctgaaggcc</span>
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47
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<pre style="margin: 0;">-<span id="LC47" class="line" lang="plaintext">cagcaggaagagaggctggaggggatcaacaagcaattcctcgatgatcccaaatacagc</span>
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48
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<pre style="margin: 0;">-<span id="LC48" class="line" lang="plaintext">aatgatgaggatctgccgtccaaacttgaagccttcaaggtgaagtacatggagtttgat</span>
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49
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<pre style="margin: 0;">-<span id="LC49" class="line" lang="plaintext">ctgaatggaaatggagatatcgatattatgtccttgaagcgaatgctggagaaacttggg</span>
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50
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<pre style="margin: 0;">-<span id="LC50" class="line" lang="plaintext">gttcccaagacccacctagagctgaagagattaattagagaggtgtccagtggctccgag</span>
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51
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<pre style="margin: 0;">-<span id="LC51" class="line" lang="plaintext">---gagacgttcagctactctgactttctcagaatgatgctgggcaagagatctgccatc</span>
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52
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<pre style="margin: 0;">-<span id="LC52" class="line" lang="plaintext">ttgagaatgattctgatgtatgaggagaaaaacaaagaacacaag---aggccaactggt</span>
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53
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<pre style="margin: 0;">-<span id="LC53" class="line" lang="plaintext">cccccagccaagaaagctatctccgagctgccctga</span>
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<td class="diff-line-num old old_line" data-linenumber="54" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
54
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<pre style="margin: 0;">-<span id="LC54" class="line" lang="plaintext">[6] AB035322</span>
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<td class="diff-line-num old old_line" data-linenumber="55" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
55
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC55" class="line" lang="plaintext">atgtcggtcgcactcagcaacaggttccaaggagggaaggcgttcggtttgctcaaagcc</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="56" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
56
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC56" class="line" lang="plaintext">cggcaggagaagaggctcgaggagatcaatcgggagttcctctgtgaccagaagtacagt</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="57" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
57
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC57" class="line" lang="plaintext">gatgaagagaacctgccggaaaagctcgcagccttcaaagagaaatacatggagtttgac</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="58" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
58
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC58" class="line" lang="plaintext">ctgaataatgaaggcgagattgatctgatgtctttaaagaggatgatggagaagctgggg</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="59" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
59
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC59" class="line" lang="plaintext">gtccccaagacccacctggagatgaagaagatgatctcggaggtgacagggggtgtcagt</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="60" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
60
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC60" class="line" lang="plaintext">---gacaccatctcctaccgagactttgtgaatatgatgctgggcaagcggtcggctgtc</span>
</pre>
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61
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<pre style="margin: 0;">-<span id="LC61" class="line" lang="plaintext">ctcaagctggtcatgatgtttgaaggaaaagccaacgagagcagcccgaagccagctggc</span>
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62
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<pre style="margin: 0;">-<span id="LC62" class="line" lang="plaintext">ccacctccagagcgagacatcgccagcctgccttga</span>
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<td class="diff-line-num old old_line" data-linenumber="63" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
63
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<pre style="margin: 0;">-<span id="LC63" class="line" lang="plaintext">[7] AB036423.IBA1</span>
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<td class="diff-line-num old old_line" data-linenumber="64" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
64
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<pre style="margin: 0;">-<span id="LC64" class="line" lang="plaintext">---------atgaagcctgaggagatttcaagaggaaaagcttttggactgctgaaggcc</span>
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65
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<pre style="margin: 0;">-<span id="LC65" class="line" lang="plaintext">cagcaggaagagaggctggaggggatcaacaagcaattcctcgatgatcccaaatacagc</span>
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66
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC66" class="line" lang="plaintext">aatgatgaggatctgccgtccaaacttgaagccttcaaggtgaagtacatggagtttgat</span>
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<td class="diff-line-num old old_line" data-linenumber="67" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
67
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC67" class="line" lang="plaintext">ctgaatggaaatggagatatcgatattatgtccttgaagcgaatgctggagaaacttggg</span>
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<td class="diff-line-num old old_line" data-linenumber="68" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
68
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC68" class="line" lang="plaintext">gttcccaagacccacctagagctgaagagattaattagagaggtgtccagtggctccgag</span>
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<td class="diff-line-num old old_line" data-linenumber="69" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
69
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC69" class="line" lang="plaintext">---gagacgttcagctactctgactttctcagaatgatgctgggcaagagatctgccatc</span>
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70
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<pre style="margin: 0;">-<span id="LC70" class="line" lang="plaintext">ttgagaatgattctgatgtatgaggagaaaaacaaagaacacaag---aggccaactggt</span>
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71
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<pre style="margin: 0;">-<span id="LC71" class="line" lang="plaintext">cccccagccaagaaagctatctccgagctgccctga</span>
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72
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<pre style="margin: 0;">-<span id="LC72" class="line" lang="plaintext">[8] AB036423.PE2</span>
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<td class="diff-line-num old old_line" data-linenumber="73" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
73
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<pre style="margin: 0;">-<span id="LC73" class="line" lang="plaintext">------atgagccaaagcagggatttgcagggaggaaaagcttttggactgctgaaggcc</span>
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74
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<pre style="margin: 0;">-<span id="LC74" class="line" lang="plaintext">cagcaggaagagaggctggaggggatcaacaagcaattcctcgatgatcccaaatacagc</span>
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75
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<pre style="margin: 0;">-<span id="LC75" class="line" lang="plaintext">aatgatgaggatctgccgtccaaacttgaagccttcaaggtgaagtacatggagtttgat</span>
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76
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC76" class="line" lang="plaintext">ctgaatggaaatggagatatcgatattatgtccttgaagcgaatgctggagaaacttggg</span>
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77
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC77" class="line" lang="plaintext">gttcccaagacccacctagagctgaagagattaattagagaggtgtccagtggctccgag</span>
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<td class="diff-line-num old old_line" data-linenumber="78" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
78
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC78" class="line" lang="plaintext">---gagacgttcagctactctgactttctcagaatgatgctgggcaagagatctgccatc</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="79" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
79
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC79" class="line" lang="plaintext">ttgagaatgattctgatgtatgaggagaaaaacaaagaacacaag---aggccaactggt</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="80" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
80
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC80" class="line" lang="plaintext">cccccagccaagaaagctatctccgagctgccctga</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="81" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
81
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC81" class="line" lang="plaintext">[9] AB094629.IBA2</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="82" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
82
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC82" class="line" lang="plaintext">atgtcggtcgcactcagcaacaggttccaaggagggaaggcgttcggtttgctcaaagcc</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="83" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
83
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<td class="line_content noteable_line old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC83" class="line" lang="plaintext">cggcaggagaagaggctcgaggagatcaatcgggagttcctctgtgaccagaagtacagt</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="84" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
84
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<td class="line_content noteable_line old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC84" class="line" lang="plaintext">gatgaagagaacctgccggaaaagctcgcagccttcaaagagaaatacatggagtttgac</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="85" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
85
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<pre style="margin: 0;">-<span id="LC85" class="line" lang="plaintext">ctgaataatgaaggcgagattgatctgatgtctttaaagaggatgatggagaagctgggg</span>
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86
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<pre style="margin: 0;">-<span id="LC86" class="line" lang="plaintext">gtccccaagacccacctggagatgaagaagatgatctcggaggtgacagggggtgtcagt</span>
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<td class="diff-line-num old old_line" data-linenumber="87" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
87
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<pre style="margin: 0;">-<span id="LC87" class="line" lang="plaintext">---gacaccatctcctaccgagactttgtgaatatgatgctgggcaagcggtcggctgtc</span>
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<td class="diff-line-num old old_line" data-linenumber="88" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
88
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<pre style="margin: 0;">-<span id="LC88" class="line" lang="plaintext">ctcaagctggtcatgatgtttgaaggaaaagccaacgagagcagcccgaagccagctggc</span>
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89
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<pre style="margin: 0;">-<span id="LC89" class="line" lang="plaintext">ccacctccagagcgagacatcgccagcctgccttga</span>
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<td class="diff-line-num old old_line" data-linenumber="90" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
90
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<pre style="margin: 0;">-<span id="LC90" class="line" lang="plaintext">[10] AB128049.AIF1</span>
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<td class="diff-line-num old old_line" data-linenumber="91" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
91
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<pre style="margin: 0;">-<span id="LC91" class="line" lang="plaintext">------atgagccaaaccagggatttacagggaggaaaagctttcggactgctgaaggcc</span>
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<td class="diff-line-num old old_line" data-linenumber="92" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
92
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<pre style="margin: 0;">-<span id="LC92" class="line" lang="plaintext">cagcaggaagagaggctggatgagatcaacaagcaatttctagatgatcccaaatacagc</span>
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93
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC93" class="line" lang="plaintext">agtgatgaggatctgctctccaaactggaaggcttcaaagagaaatacatggagtttgac</span>
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<td class="diff-line-num old old_line" data-linenumber="94" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
94
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC94" class="line" lang="plaintext">cttaatggaaacggcgatattgatatcatgtccctgaagcgaatgctggagaaacttggg</span>
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<td class="diff-line-num old old_line" data-linenumber="95" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
95
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC95" class="line" lang="plaintext">gtccccaagactcacctagagctaaagaaattaattggagaggtgtccagtggctccggg</span>
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<td class="diff-line-num old old_line" data-linenumber="96" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
96
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<pre style="margin: 0;">-<span id="LC96" class="line" lang="plaintext">---gagacgttcagctaccctgactttctcaggatgatgctgggcaagagatctgccatt</span>
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<td class="diff-line-num old old_line" data-linenumber="97" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
97
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<pre style="margin: 0;">-<span id="LC97" class="line" lang="plaintext">ctaaaaatgatcctgatgtatgaggaaaaagcgagagaaaaggaa---aagccaacaggc</span>
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<td class="diff-line-num old old_line" data-linenumber="98" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
98
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<pre style="margin: 0;">-<span id="LC98" class="line" lang="plaintext">cccccagccaagaaagctatttctgagttgccctga</span>
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<td class="diff-line-num old old_line" data-linenumber="99" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
99
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<pre style="margin: 0;">-<span id="LC99" class="line" lang="plaintext">[11] AF074959.PE1</span>
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<td class="diff-line-num old old_line" data-linenumber="100" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
100
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<pre style="margin: 0;">-<span id="LC100" class="line" lang="plaintext">------atgagccaaagcagggatttgcagggaggaaaagcttttggactgctgaaggcc</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="101" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
101
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<pre style="margin: 0;">-<span id="LC101" class="line" lang="plaintext">cagcaggaagagaggctggaggggatcaacaagcaattcctcgatgatcccaaatacagc</span>
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<td class="diff-line-num old old_line" data-linenumber="102" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
102
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<pre style="margin: 0;">-<span id="LC102" class="line" lang="plaintext">aatgatgaggatctgccgtccaaacttgaagccttcaaggtgaagtacatggagtttgat</span>
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<td class="diff-line-num old old_line" data-linenumber="103" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
103
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC103" class="line" lang="plaintext">ctgaatggaaatggagatatcgatattatgtccttgaagcgaatgctggagaaacttggg</span>
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<td class="diff-line-num old old_line" data-linenumber="104" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
104
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC104" class="line" lang="plaintext">gttcccaagacccacctagagctgaagagattaattagagaggtgtccagtggctccgag</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="105" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
105
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC105" class="line" lang="plaintext">---gagacgttcagctactctgactttctcagaatgatgctgggcaagagatctgccatc</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="106" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
106
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC106" class="line" lang="plaintext">ttgagaatgattctgatgtatgaggagaaaaacaaagaacacaag---aggccaactggt</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="107" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
107
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC107" class="line" lang="plaintext">cccccagccaagaaagctatctccgagctgccctga</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="108" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
108
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC108" class="line" lang="plaintext">[12] AF109719.PE7</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="109" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
109
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC109" class="line" lang="plaintext">------atgagccaaagcagggatttgcagggaggaaaagcttttggactgctgaaggcc</span>
</pre>
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110
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<pre style="margin: 0;">-<span id="LC110" class="line" lang="plaintext">cagcaggaagagaggctggaggggatcaacaagcaattcctcgatgatcccaaatacagc</span>
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111
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<pre style="margin: 0;">-<span id="LC111" class="line" lang="plaintext">aatgatgaggatctgccgtccaaacttgaagccttcaaggtgaagtacatggagtttgat</span>
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112
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<pre style="margin: 0;">-<span id="LC112" class="line" lang="plaintext">ctgaatggaaatggagatatcgatattatgtccttgaagcgaatgctggagaaacttggg</span>
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113
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<pre style="margin: 0;">-<span id="LC113" class="line" lang="plaintext">gttcccaagacccacctagagctgaagagattaattagagaggtgtccagtggctccgag</span>
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114
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<pre style="margin: 0;">-<span id="LC114" class="line" lang="plaintext">---gagacgttcagctactctgactttctcagaatgatgctgggcaagagatctgccatc</span>
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<td class="diff-line-num old old_line" data-linenumber="115" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
115
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<pre style="margin: 0;">-<span id="LC115" class="line" lang="plaintext">ttgagaatgattctgatgtatgaggagaaaaacaaagaacacaag---aggccaactggt</span>
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116
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<pre style="margin: 0;">-<span id="LC116" class="line" lang="plaintext">cccccagccaagaaagctatctccgagctgccctga</span>
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<td class="diff-line-num old old_line" data-linenumber="117" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
117
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<pre style="margin: 0;">-<span id="LC117" class="line" lang="plaintext">[13] AF129756.PE18</span>
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<td class="diff-line-num old old_line" data-linenumber="118" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
118
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<pre style="margin: 0;">-<span id="LC118" class="line" lang="plaintext">------atgagccaaaccagggatttacagggaggaaaagctttcagactgctgaaggcc</span>
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119
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<pre style="margin: 0;">-<span id="LC119" class="line" lang="plaintext">cagcaggaagagaggctggatgagatcaacaagcaattcctagacgatcccaaatatagc</span>
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120
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<pre style="margin: 0;">-<span id="LC120" class="line" lang="plaintext">agtgatgaggatctgccctccaaactggaaggcttcaaagagaaatacatggagtttgac</span>
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121
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<pre style="margin: 0;">-<span id="LC121" class="line" lang="plaintext">cttaatggaaatggcgatattgatatcatgtccctgaaacgaatgctggagaaacttgga</span>
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122
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<pre style="margin: 0;">-<span id="LC122" class="line" lang="plaintext">gtccccaagactcacctagagctaaagaaattaattggagaggtgtccagtggctccggg</span>
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123
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<pre style="margin: 0;">-<span id="LC123" class="line" lang="plaintext">---gagacgttcagctaccctgactttctcaggatgatgctgggcaagagatctgccatc</span>
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124
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<pre style="margin: 0;">-<span id="LC124" class="line" lang="plaintext">ctaaaaatgatcctgatgtatgaggaaaaagcgagagaaaaggaa---aagccaacaggc</span>
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125
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<pre style="margin: 0;">-<span id="LC125" class="line" lang="plaintext">cccccagccaagaaagctatctctgagttgccctga</span>
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<td class="diff-line-num old old_line" data-linenumber="126" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
126
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<pre style="margin: 0;">-<span id="LC126" class="line" lang="plaintext">[14] AF348450.PE1</span>
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<td class="diff-line-num old old_line" data-linenumber="127" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
127
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<pre style="margin: 0;">-<span id="LC127" class="line" lang="plaintext">------atgagcgaaactagggatttacagggaggaaaagcctttgggctgcggaaagcc</span>
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<td class="diff-line-num old old_line" data-linenumber="128" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
128
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<pre style="margin: 0;">-<span id="LC128" class="line" lang="plaintext">cagcaggaagagagaatcaatgaaatcaaccagcaattcctggatgatcccaaatacagc</span>
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<td class="diff-line-num old old_line" data-linenumber="129" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
129
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<pre style="margin: 0;">-<span id="LC129" class="line" lang="plaintext">agtgatgaggacctgccctccaaactggaagccttcaagaagaaatacatggagtttgac</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="130" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
130
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC130" class="line" lang="plaintext">ctgaatgaagatggaggtatcgatatcatgtccctgaagcgaatgatggagaaacttggg</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="131" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
131
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC131" class="line" lang="plaintext">gttcccaagacccacctggagctaaagaaattaatcatggaggtatccagtggccctggg</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="132" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
132
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC132" class="line" lang="plaintext">---gagactttcagctactctgactttctcaagatgatgttgggcaagagatctgccatt</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="133" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
133
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC133" class="line" lang="plaintext">ctaaaaatgatcctgatgtatgaagagaaagcaagagaacaggag---aagccaacaggt</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="134" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
134
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<pre style="margin: 0;">-<span id="LC134" class="line" lang="plaintext">ctcccagccaagaaagctatctctgagttgccctga</span>
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<td class="diff-line-num old old_line" data-linenumber="135" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
135
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<pre style="margin: 0;">-<span id="LC135" class="line" lang="plaintext">[15] AJ506968.AIF1</span>
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<td class="diff-line-num old old_line" data-linenumber="136" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
136
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<pre style="margin: 0;">-<span id="LC136" class="line" lang="plaintext">------------atggagaaaaatgttcaaggaggcaaagcgtatggacttctcaaaagt</span>
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<td class="diff-line-num old old_line" data-linenumber="137" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
137
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<pre style="margin: 0;">-<span id="LC137" class="line" lang="plaintext">caccaggaagagaaactgaactcgatcaatgaggcttttcagtcagatcctcaatatgcc</span>
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138
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<pre style="margin: 0;">-<span id="LC138" class="line" lang="plaintext">gaagaggaggaccttggctccaaacttgaaatgtttaaaaataaatacatggagtttgat</span>
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<td class="diff-line-num old old_line" data-linenumber="139" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
139
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<pre style="margin: 0;">-<span id="LC139" class="line" lang="plaintext">ctcaatgatcaaggagacatagacataatggggttaaaacggatgcttgaaaaacttgga</span>
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<td class="diff-line-num old old_line" data-linenumber="140" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
140
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<pre style="margin: 0;">-<span id="LC140" class="line" lang="plaintext">gtggccaagactcacctagaactgaaaaagatgatgtcagaggtgattggtggggcctcg</span>
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<td class="diff-line-num old old_line" data-linenumber="141" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
141
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<pre style="margin: 0;">-<span id="LC141" class="line" lang="plaintext">aaagacacaatcagctaccacgacttcctaaatatgatgctggggaaaagaaatgcaatt</span>
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<td class="diff-line-num old old_line" data-linenumber="142" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
142
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<pre style="margin: 0;">-<span id="LC142" class="line" lang="plaintext">ctcaaactgatcctgatgtttgaaggaatggggaaggagcaggagtcaaaagtcgttggt</span>
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<td class="diff-line-num old old_line" data-linenumber="143" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
143
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<pre style="margin: 0;">-<span id="LC143" class="line" lang="plaintext">ccacctggtcgcaaaaccttttcagacctgccctga</span>
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<td class="diff-line-num old old_line" data-linenumber="144" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
144
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<pre style="margin: 0;">-<span id="LC144" class="line" lang="plaintext">[16] AK006184.PE1</span>
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<td class="diff-line-num old old_line" data-linenumber="145" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
145
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<pre style="margin: 0;">-<span id="LC145" class="line" lang="plaintext">------atgagccaaagcagggatttgcagggaggaaaagcttttggactgctgaaggcc</span>
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<td class="diff-line-num old old_line" data-linenumber="146" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
146
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<pre style="margin: 0;">-<span id="LC146" class="line" lang="plaintext">cagcaggaagagaggctggaggggatcaacaagcaattcctcgatgatcccaaatacagc</span>
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147
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<pre style="margin: 0;">-<span id="LC147" class="line" lang="plaintext">aatgatgaggatctgccgtccaaacttgaagccttcaaggtgaagtacatggagtttgat</span>
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<td class="diff-line-num old old_line" data-linenumber="148" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
148
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<pre style="margin: 0;">-<span id="LC148" class="line" lang="plaintext">ctgaatggaaatggagatatcgatattatgtccttgaagcgaatgctggagaaacttggg</span>
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<td class="diff-line-num old old_line" data-linenumber="149" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
149
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<pre style="margin: 0;">-<span id="LC149" class="line" lang="plaintext">gttcccaagacccacctagagctgaagagattaattagagaggtgtccagtggctccgag</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="150" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
150
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<pre style="margin: 0;">-<span id="LC150" class="line" lang="plaintext">---gagacgttcagctactctgactttctcagaatgatgctgggcaagagatctgccatc</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="151" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
151
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC151" class="line" lang="plaintext">ttgagaatgattctgatgtatgaggagaaaaacaaagaacacaag---aggccaactggt</span>
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<td class="diff-line-num old old_line" data-linenumber="152" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
152
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC152" class="line" lang="plaintext">cccccagccaagaaagctatctccgagctgccctga</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="153" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
153
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC153" class="line" lang="plaintext">[17] AK006562.PE1</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="154" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
154
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC154" class="line" lang="plaintext">------atgagccaaagcagggatttgcagggaggaaaagcttttggactgctgaaggcc</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="155" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
155
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC155" class="line" lang="plaintext">cagcaggaagagaggctggaggggatcaacaagcaattcctcgatgatcccaaatacagc</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="156" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
156
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
</td>
<td class="line_content noteable_line old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC156" class="line" lang="plaintext">aatgatgaggatctgccgtccaaacttgaagccttcaaggtgaagtacatggagtttgat</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="157" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
157
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
</td>
<td class="line_content noteable_line old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC157" class="line" lang="plaintext">ctgaatggaaatggagatatcgatattatgtccttgaagcgaatgctggagaaacttggg</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="158" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
158
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
</td>
<td class="line_content noteable_line old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC158" class="line" lang="plaintext">gttcccaagacccacctagagctgaagagattaattagagaggtgtccagtggctccgag</span>
</pre>
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159
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<pre style="margin: 0;">-<span id="LC159" class="line" lang="plaintext">---gagacgttcagctactctgactttctcagaatgatgctgggcaagagatctgccatc</span>
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160
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<pre style="margin: 0;">-<span id="LC160" class="line" lang="plaintext">ttgagaatgattctgatgtatgaggagaaaaacaaagaacacaag---aggccaactggt</span>
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<td class="diff-line-num old old_line" data-linenumber="161" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
161
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC161" class="line" lang="plaintext">cccccagccaagaaagctatctccgagctgccctga</span>
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<td class="diff-line-num old old_line" data-linenumber="162" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
162
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC162" class="line" lang="plaintext">[18] AK022845.PE1</span>
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<td class="diff-line-num old old_line" data-linenumber="163" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
163
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC163" class="line" lang="plaintext">atgtcgggcgagctcagcaacaggttccaaggagggaaggcgttcggcttgctcaaagcc</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="164" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
164
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC164" class="line" lang="plaintext">cggcaggagaggaggctggccgagatcaaccgggagcttctgtgtgaccagaagtacagt</span>
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<td class="diff-line-num old old_line" data-linenumber="165" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
165
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC165" class="line" lang="plaintext">gatgaagagaaccttccagaaaagctcacagccttcaaagagaagtacatggagtttgac</span>
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<td class="diff-line-num old old_line" data-linenumber="166" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
166
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC166" class="line" lang="plaintext">ctgaacaatgaaggcgagattgacctgatgtctttaaagaggatgatggagaagcttggt</span>
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<td class="diff-line-num old old_line" data-linenumber="167" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
167
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC167" class="line" lang="plaintext">gtccccaagacccacctggagatgaagaagatgatctcagaggtgacaggaggggtcagt</span>
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<td class="diff-line-num old old_line" data-linenumber="168" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
168
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC168" class="line" lang="plaintext">---gacactatatcctaccgagactttgtgaacatgatgctggggaaacggtcggctgtc</span>
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<td class="diff-line-num old old_line" data-linenumber="169" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
169
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC169" class="line" lang="plaintext">ctcaagttagtcatgatgtttgaaggaaaagccaacgagagcagccccaagccagttggc</span>
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<td class="diff-line-num old old_line" data-linenumber="170" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
170
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC170" class="line" lang="plaintext">ccccctccagagagagacattgctagcctgccctga</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="171" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
171
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC171" class="line" lang="plaintext">[19] AK028955.PE1</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="172" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
172
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC172" class="line" lang="plaintext">atgtcggtcgcactcagcaacaggttccaaggagggaaggcgttcggtttgctcaaagcc</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="173" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
173
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC173" class="line" lang="plaintext">cggcaggagaagaggctcgaggagatcaatcgggagttcctctgtgaccagaagtacagt</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="174" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
174
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC174" class="line" lang="plaintext">gatgaagagaacctgccggaaaagctcgcagccttcaaagagaaatacatggagtttgac</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="175" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
175
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC175" class="line" lang="plaintext">ctgaataatgaaggcgagattgatctgatgtctttaaagaggatgatggagaagctgggg</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="176" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
176
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<td class="line_content noteable_line old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC176" class="line" lang="plaintext">gtccccaagacccacctggagatgaagaagatgatctcggaggtgacagggggtgtcagt</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="177" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
177
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<td class="line_content noteable_line old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC177" class="line" lang="plaintext">---gacaccatctcctaccgagactttgtgaataagatgctgggcaagcggtcggctgtc</span>
</pre>
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</tr>
<tr class="line_holder old" id="" style="line-height: 1.6;">
<td class="diff-line-num old old_line" data-linenumber="178" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
178
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
</td>
<td class="line_content noteable_line old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC178" class="line" lang="plaintext">ctcaagctggtcatgatgtttgaaggaaaagccaacgagagcagcccgaagccagctggc</span>
</pre>
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</tr>
<tr class="line_holder old" id="" style="line-height: 1.6;">
<td class="diff-line-num old old_line" data-linenumber="179" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
179
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
</td>
<td class="line_content noteable_line old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC179" class="line" lang="plaintext">ccacctccagagcgagacatcgccagcctgccttga</span>
</pre>
</td>
</tr>
<tr class="line_holder old" id="" style="line-height: 1.6;">
<td class="diff-line-num old old_line" data-linenumber="180" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
180
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
</td>
<td class="line_content noteable_line old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC180" class="line" lang="plaintext">[20] AK045539.PE1</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="181" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
181
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
</td>
<td class="line_content noteable_line old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC181" class="line" lang="plaintext">atgtcggtcgcactcagcaacaggttccaaggagggaaggcgttcggtttgctcaaagcc</span>
</pre>
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</tr>
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<td class="diff-line-num old old_line" data-linenumber="182" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
182
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
</td>
<td class="line_content noteable_line old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC182" class="line" lang="plaintext">cggcaggagaagaggctcgaggagatcaatcgggagttcctctgtgaccagaagtacagt</span>
</pre>
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</tr>
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<td class="diff-line-num old old_line" data-linenumber="183" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
183
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC183" class="line" lang="plaintext">gatgaagagaacctgccggaaaagctcgcagccttcaaagagaaatacatggagtttgac</span>
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184
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<pre style="margin: 0;">-<span id="LC184" class="line" lang="plaintext">ctgaataatgaaggcgagattgatctgatgtctttaaagaggatgatggagaagctgggg</span>
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<td class="diff-line-num old old_line" data-linenumber="185" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
185
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<pre style="margin: 0;">-<span id="LC185" class="line" lang="plaintext">gtccccaagacccacctggagatgaagaagatgatctcggaggtgacagggggtgtcagt</span>
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<td class="diff-line-num old old_line" data-linenumber="186" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
186
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<pre style="margin: 0;">-<span id="LC186" class="line" lang="plaintext">---gacaccatctcctaccgagactttgtgaatatgatgctgggcaagcggtcggctgtc</span>
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<td class="diff-line-num old old_line" data-linenumber="187" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
187
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<pre style="margin: 0;">-<span id="LC187" class="line" lang="plaintext">ctcaagctggtcatgatgtttgaaggaaaagccaacgagagcagcccgaagccagctggc</span>
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<td class="diff-line-num old old_line" data-linenumber="188" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
188
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC188" class="line" lang="plaintext">ccacctccagagcgagacatcgccagcctgccttga</span>
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<td class="diff-line-num old old_line" data-linenumber="189" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
189
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC189" class="line" lang="plaintext">[21] AK091912.PE1</span>
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<td class="diff-line-num old old_line" data-linenumber="190" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
190
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<pre style="margin: 0;">-<span id="LC190" class="line" lang="plaintext">atgtcgggcgagctcagcaacaggttccaaggagggaaggcgttcggcttgctcaaagcc</span>
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<td class="diff-line-num old old_line" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
191
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<pre style="margin: 0;">-<span id="LC191" class="line" lang="plaintext">cggcaggagaggaggctggccgagatcaaccgggagtttctgtgtgaccagaagtacagt</span>
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<td class="diff-line-num old old_line" data-linenumber="192" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
192
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<pre style="margin: 0;">-<span id="LC192" class="line" lang="plaintext">gatgaagagaaccttccagaaaagctcacagccttcaaagagaagtacatggagttt---</span>
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<td class="diff-line-num old old_line" data-linenumber="193" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
193
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<pre style="margin: 0;">-<span id="LC193" class="line" lang="plaintext">---------------------gacctgatgtctttaaagaggatgatggagaagcttggt</span>
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<td class="diff-line-num old old_line" data-linenumber="194" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
194
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<pre style="margin: 0;">-<span id="LC194" class="line" lang="plaintext">gtccccaagacccacctggagatgaagaagatgatctcagaggtgacaggaggggtcagt</span>
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<td class="diff-line-num old old_line" data-linenumber="195" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
195
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<pre style="margin: 0;">-<span id="LC195" class="line" lang="plaintext">---gacactatatcctaccgagactttgtgaacatgatgctggggaaacggtcggctgtc</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="196" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
196
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<pre style="margin: 0;">-<span id="LC196" class="line" lang="plaintext">ctcaagttagtcatgatgtttgaaggaaaagccaacgagagcagccccaagccagttggc</span>
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197
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<pre style="margin: 0;">-<span id="LC197" class="line" lang="plaintext">ccccctccagagagagacattgctagcctgccctga</span>
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<td class="diff-line-num old old_line" data-linenumber="198" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
198
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<pre style="margin: 0;">-<span id="LC198" class="line" lang="plaintext">[22] AL136566.PE1</span>
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<td class="diff-line-num old old_line" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
199
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<pre style="margin: 0;">-<span id="LC199" class="line" lang="plaintext">atgtcgggcgagctcagcaacaggttccaaggagggaaggcgttcggcttgctcaaagcc</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="200" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
200
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<pre style="margin: 0;">-<span id="LC200" class="line" lang="plaintext">cggcaggagaggaggctggccgagatcaaccgggagtttctgtgtgaccagaagtacagt</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="201" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
201
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC201" class="line" lang="plaintext">gatgaagagaaccttccagaaaagctcacagccttcaaagagaagtacatggagtttgac</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="202" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
202
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC202" class="line" lang="plaintext">ctgaacaatgaaggcgagattgacctgatgtctttaaagaggatgatggagaagcttggt</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="203" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
203
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC203" class="line" lang="plaintext">gtccccaagacccacctggagatgaagaagatgatctcagaggtgacaggaggggtcagt</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="204" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
204
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<td class="line_content noteable_line old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC204" class="line" lang="plaintext">---gacactatatcctaccgagactttgtgaacatgatgctggggaaacggtcggctgtc</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="205" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
205
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC205" class="line" lang="plaintext">ctcaagttagtcatgatgtttgaaggaaaagccaacgagagcagccccaagccagttggc</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="206" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
206
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC206" class="line" lang="plaintext">ccccctccagagagagacattgctagcctgccctga</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="207" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
207
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<pre style="margin: 0;">-<span id="LC207" class="line" lang="plaintext">[23] AL157938.PE2</span>
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208
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<pre style="margin: 0;">-<span id="LC208" class="line" lang="plaintext">atgtcgggcgagctcagcaacaggttccaaggagggaaggcgttcggcttgctcaaagcc</span>
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209
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<pre style="margin: 0;">-<span id="LC209" class="line" lang="plaintext">cggcaggagaggaggctggccgagatcaaccgggagtttctgtgtgaccagaagtacagt</span>
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210
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<pre style="margin: 0;">-<span id="LC210" class="line" lang="plaintext">gatgaagagaaccttccagaaaagctcacagccttcaaagagaagtacatggagtttgac</span>
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211
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<pre style="margin: 0;">-<span id="LC211" class="line" lang="plaintext">ctgaacaatgaaggcgagattgacctgatgtctttaaagaggatgatggagaagcttggt</span>
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212
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<pre style="margin: 0;">-<span id="LC212" class="line" lang="plaintext">gtccccaagacccacctggagatgaagaagatgatctcagaggtgacaggaggggtcagt</span>
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<td class="diff-line-num old old_line" data-linenumber="213" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
213
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<pre style="margin: 0;">-<span id="LC213" class="line" lang="plaintext">---gacactatatcctaccgagactttgtgaacatgatgctggggaaacggtcggctgtc</span>
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<td class="diff-line-num old old_line" data-linenumber="214" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
214
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<pre style="margin: 0;">-<span id="LC214" class="line" lang="plaintext">ctcaagttagtcatgatgtttgaaggaaaagccaacgagagcagccccaagccagttggc</span>
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215
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<pre style="margin: 0;">-<span id="LC215" class="line" lang="plaintext">ccccctccagagagagacattgctagcctgccctga</span>
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<td class="diff-line-num old old_line" data-linenumber="216" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
216
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<pre style="margin: 0;">-<span id="LC216" class="line" lang="plaintext">[24] AL157938.PE3</span>
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<td class="diff-line-num old old_line" data-linenumber="217" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
217
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<pre style="margin: 0;">-<span id="LC217" class="line" lang="plaintext">atgtcgggcgagctcagcaacaggttccaaggagggaaggcgttcggcttgctcaaagcc</span>
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<td class="diff-line-num old old_line" data-linenumber="218" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
218
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<pre style="margin: 0;">-<span id="LC218" class="line" lang="plaintext">cggcaggagaggaggctggccgagatcaaccgggagtttctgtgtgaccagaagtacagt</span>
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219
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<pre style="margin: 0;">-<span id="LC219" class="line" lang="plaintext">gatgaagagaaccttccagaaaagctcacagccttcaaagagaagtacatggagttt---</span>
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220
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<pre style="margin: 0;">-<span id="LC220" class="line" lang="plaintext">---------------------gacctgatgtctttaaagaggatgatggagaagcttggt</span>
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<td class="diff-line-num old old_line" data-linenumber="221" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
221
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<pre style="margin: 0;">-<span id="LC221" class="line" lang="plaintext">gtccccaagacccacctggagatgaagaagatgatctcagaggtgacaggaggggtcagt</span>
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<td class="diff-line-num old old_line" data-linenumber="222" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
222
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC222" class="line" lang="plaintext">---gacactatatcctaccgagactttgtgaacatgatgctggggaaacggtcggctgtc</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="223" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
223
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC223" class="line" lang="plaintext">ctcaagttagtcatgatgtttgaaggaaaagccaacgagagcagccccaagccagttggc</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="224" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
224
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC224" class="line" lang="plaintext">ccccctccagagagagacattgctagcctgccctga</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="225" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
225
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC225" class="line" lang="plaintext">[25] AL662801.PE45</span>
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<td class="diff-line-num old old_line" data-linenumber="226" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
226
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC226" class="line" lang="plaintext">------atgagccaaaccagggatttacagggaggaaaagctttcggactgctgaaggcc</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="227" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
227
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC227" class="line" lang="plaintext">cagcaggaagagaggctggatgagatcaacaagcaattcctagacgatcccaaatatagc</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="228" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
228
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC228" class="line" lang="plaintext">agtgatgaggatctgccctccaaactggaaggcttcaaagagaaatacatggagtttgac</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="229" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
229
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC229" class="line" lang="plaintext">cttaatggaaatggcgatattgatatcatgtccctgaaacgaatgctggagaaacttgga</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="230" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
230
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC230" class="line" lang="plaintext">gtccccaagactcacctagagctaaagaaattaattggagaggtgtccagtggctccggg</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="231" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
231
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC231" class="line" lang="plaintext">---gagacgttcagctaccctgactttctcaggatgatgctgggcaagagatctgccatc</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="232" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
232
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<pre style="margin: 0;">-<span id="LC232" class="line" lang="plaintext">ctaaaaatgatcctgatgtatgaggaaaaagcgagagaaaaggaa---aagccaacaggc</span>
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<td class="diff-line-num old old_line" data-linenumber="233" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
233
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<pre style="margin: 0;">-<span id="LC233" class="line" lang="plaintext">cccccagccaagaaagctatctctgagttgccctga</span>
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<td class="diff-line-num old old_line" data-linenumber="234" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
234
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<pre style="margin: 0;">-<span id="LC234" class="line" lang="plaintext">[26] AL662847.AIF1</span>
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<td class="diff-line-num old old_line" data-linenumber="235" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
235
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<pre style="margin: 0;">-<span id="LC235" class="line" lang="plaintext">------atgagccaaaccagggatttacagggaggaaaagctttcggactgctgaaggcc</span>
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<td class="diff-line-num old old_line" data-linenumber="236" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
236
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<pre style="margin: 0;">-<span id="LC236" class="line" lang="plaintext">cagcaggaagagaggctggatgagatcaacaagcaattcctagacgatcccaaatatagc</span>
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237
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<pre style="margin: 0;">-<span id="LC237" class="line" lang="plaintext">agtgatgaggatctgccctccaaactggaaggcttcaaagagaaatacatggagtttgac</span>
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<td class="diff-line-num old old_line" data-linenumber="238" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
238
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC238" class="line" lang="plaintext">cttaatggaaatggcgatattgatatcatgtccctgaaacgaatgctggagaaacttgga</span>
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<td class="diff-line-num old old_line" data-linenumber="239" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
239
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC239" class="line" lang="plaintext">gtccccaagactcacctagagctaaagaaattaattggagaggtgtccagtggctccggg</span>
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<td class="diff-line-num old old_line" data-linenumber="240" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
240
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<pre style="margin: 0;">-<span id="LC240" class="line" lang="plaintext">---gagacgttcagctaccctgactttctcaggatgatgctgggcaagagatctgccatc</span>
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241
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<pre style="margin: 0;">-<span id="LC241" class="line" lang="plaintext">ctaaaaatgatcctgatgtatgaggaaaaagcgagagaaaaggaa---aagccaacaggc</span>
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242
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<pre style="margin: 0;">-<span id="LC242" class="line" lang="plaintext">cccccagccaagaaagctatctctgagttgccctga</span>
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<td class="diff-line-num old old_line" data-linenumber="243" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
243
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<pre style="margin: 0;">-<span id="LC243" class="line" lang="plaintext">[27] AL805934.AIF1</span>
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<td class="diff-line-num old old_line" data-linenumber="244" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
244
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<pre style="margin: 0;">-<span id="LC244" class="line" lang="plaintext">------atgagccaaaccagggatttacagggaggaaaagctttcggactgctgaaggcc</span>
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245
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<pre style="margin: 0;">-<span id="LC245" class="line" lang="plaintext">cagcaggaagagaggctggatgagatcaacaagcaattcctagacgatcccaaatatagc</span>
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246
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<pre style="margin: 0;">-<span id="LC246" class="line" lang="plaintext">agtgatgaggatctgccctccaaactggaaggcttcaaagagaaatacatggagtttgac</span>
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<td class="diff-line-num old old_line" data-linenumber="247" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
247
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<pre style="margin: 0;">-<span id="LC247" class="line" lang="plaintext">cttaatggaaatggcgatattgatatcatgtccctgaaacgaatgctggagaaacttgga</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="248" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
248
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC248" class="line" lang="plaintext">gtccccaagactcacctagagctaaagaaattaattggagaggtgtccagtggctccggg</span>
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<td class="diff-line-num old old_line" data-linenumber="249" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
249
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<pre style="margin: 0;">-<span id="LC249" class="line" lang="plaintext">---gagacgttcagctaccctgactttctcaggatgatgctgggcaagagatctgccatc</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="250" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
250
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<pre style="margin: 0;">-<span id="LC250" class="line" lang="plaintext">ctaaaaatgatcctgatgtatgaggaaaaagcgagagaaaaggaa---aagccaacaggc</span>
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251
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC251" class="line" lang="plaintext">cccccagccaagaaagctatctctgagttgccctga</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="252" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
252
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC252" class="line" lang="plaintext">[28] AL833896.PE1</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="253" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
253
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC253" class="line" lang="plaintext">atgtcgggcgagctcagcaacaggttccaaggagggaaggcgttcggcttgctcaaagcc</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="254" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
254
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<td class="line_content noteable_line old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC254" class="line" lang="plaintext">cggcaggagaggaggctggccgagatcaaccgggagtttctgtgtgaccagaagtacagt</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="255" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
255
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<td class="line_content noteable_line old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC255" class="line" lang="plaintext">gatgaagagaaccttccagaaaagctcacagccttcaaagagaagtacatggagtttgac</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="256" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
256
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC256" class="line" lang="plaintext">ctgaacaatgaaggcgagattgacctgatgtctttaaagaggatgatggagaagcttggt</span>
</pre>
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257
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<pre style="margin: 0;">-<span id="LC257" class="line" lang="plaintext">gtccccaagacccacctggagatgaagaagatgatctcagaggtgacaggaggggtcagt</span>
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258
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<pre style="margin: 0;">-<span id="LC258" class="line" lang="plaintext">---gacactatatcctaccgagactttgtgaacatgatgctggggaaacggtcggctgtc</span>
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259
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<pre style="margin: 0;">-<span id="LC259" class="line" lang="plaintext">ctcaagttagtcatgatgtttgaaggaaaagccaacgagagcagccccaagccagttggc</span>
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260
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<pre style="margin: 0;">-<span id="LC260" class="line" lang="plaintext">ccccctccagagagagacattgctagcctgccctga</span>
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261
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<pre style="margin: 0;">-<span id="LC261" class="line" lang="plaintext">[29] AL928893.PE3</span>
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<td class="diff-line-num old old_line" data-linenumber="262" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
262
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<pre style="margin: 0;">-<span id="LC262" class="line" lang="plaintext">atgtcggtcgcactcagcaacaggttccaaggagggaaggcgttcggtttgctcaaagcc</span>
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263
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<pre style="margin: 0;">-<span id="LC263" class="line" lang="plaintext">cggcaggagaagaggctcgaggagatcaatcgggagttcctctgtgaccagaagtacagt</span>
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264
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<pre style="margin: 0;">-<span id="LC264" class="line" lang="plaintext">gatgaagagaacctgccggaaaagctcgcagccttcaaagagaaatacatggagtttgac</span>
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265
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<pre style="margin: 0;">-<span id="LC265" class="line" lang="plaintext">ctgaataatgaaggcgagattgatctgatgtctttaaagaggatgatggagaagctgggg</span>
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266
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<pre style="margin: 0;">-<span id="LC266" class="line" lang="plaintext">gtccccaagacccacctggagatgaagaagatgatctcggaggtgacagggggtgtcagt</span>
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267
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<pre style="margin: 0;">-<span id="LC267" class="line" lang="plaintext">---gacaccatctcctaccgagactttgtgaatatgatgctgggcaagcggtcggctgtc</span>
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268
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<pre style="margin: 0;">-<span id="LC268" class="line" lang="plaintext">ctcaagctggtcatgatgtttgaaggaaaagccaacgagagcagcccgaagccagctggc</span>
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269
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<pre style="margin: 0;">-<span id="LC269" class="line" lang="plaintext">ccacctccagagcgagacatcgccagcctgccttga</span>
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<td class="diff-line-num old old_line" data-linenumber="270" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
270
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<pre style="margin: 0;">-<span id="LC270" class="line" lang="plaintext">[30] AY359067.PE1</span>
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<td class="diff-line-num old old_line" data-linenumber="271" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
271
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<pre style="margin: 0;">-<span id="LC271" class="line" lang="plaintext">atgtcgggcgagctcagcaacaggttccaaggagggaaggcgttcggcttgctcaaagcc</span>
</pre>
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272
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<pre style="margin: 0;">-<span id="LC272" class="line" lang="plaintext">cggcaggagaggaggctggccgagatcaaccgggagtttctgtgtgaccagaagtacagt</span>
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273
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<pre style="margin: 0;">-<span id="LC273" class="line" lang="plaintext">gatgaagagaaccttccagaaaagctcacagccttcaaagagaagtacatggagtttgac</span>
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<td class="diff-line-num old old_line" data-linenumber="274" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
274
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC274" class="line" lang="plaintext">ctgaacaatgaaggcgagattgacctgatgtctttaaagaggatgatggagaagcttggt</span>
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275
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC275" class="line" lang="plaintext">gtccccaagacccacctggagatgaagaagatgatctcagaggtgacaggaggggtcagt</span>
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<td class="diff-line-num old old_line" data-linenumber="276" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
276
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC276" class="line" lang="plaintext">---gacactatatcctaccgagactttgtgaacatgatgctggggaaacggtcggctgtc</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="277" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
277
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC277" class="line" lang="plaintext">ctcaagttagtcatgatgtttgaaggaaaagccaacgagagcagccccaagccagttggc</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="278" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
278
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC278" class="line" lang="plaintext">ccccctccagagagagacattgctagcctgccctga</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="279" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
279
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC279" class="line" lang="plaintext">[31] BA000025.AIF1</span>
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<td class="diff-line-num old old_line" data-linenumber="280" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
280
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC280" class="line" lang="plaintext">------atgagccaaaccagggatttacagggaggaaaagctttcggactgctgaaggcc</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="281" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
281
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<pre style="margin: 0;">-<span id="LC281" class="line" lang="plaintext">cagcaggaagagaggctggatgagatcaacaagcaattcctagacgatcccaaatatagc</span>
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282
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<pre style="margin: 0;">-<span id="LC282" class="line" lang="plaintext">agtgatgaggatctgccctccaaactggaaggcttcaaagagaaatacatggagtttgac</span>
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<td class="diff-line-num old old_line" data-linenumber="283" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
283
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<pre style="margin: 0;">-<span id="LC283" class="line" lang="plaintext">cttaatggaaatggcgatattgatatcatgtccctgaaacgaatgctggagaaacttgga</span>
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<td class="diff-line-num old old_line" data-linenumber="284" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
284
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<pre style="margin: 0;">-<span id="LC284" class="line" lang="plaintext">gtccccaagactcacctagagctaaagaaattaattggagaggtgtccagtggctccggg</span>
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<td class="diff-line-num old old_line" data-linenumber="285" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
285
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<pre style="margin: 0;">-<span id="LC285" class="line" lang="plaintext">---gagacgttcagctaccctgactttctcaggatgatgctgggcaagagatctgccatc</span>
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<td class="diff-line-num old old_line" data-linenumber="286" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
286
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<pre style="margin: 0;">-<span id="LC286" class="line" lang="plaintext">ctaaaaatgatcctgatgtatgaggaaaaagcgagagaaaaggaa---aagccaacaggc</span>
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<td class="diff-line-num old old_line" data-linenumber="287" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
287
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC287" class="line" lang="plaintext">cccccagccaagaaagctatctctgagttgccctga</span>
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<td class="diff-line-num old old_line" data-linenumber="288" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
288
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<pre style="margin: 0;">-<span id="LC288" class="line" lang="plaintext">[32] BC009474.AIF1</span>
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<td class="diff-line-num old old_line" data-linenumber="289" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
289
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<pre style="margin: 0;">-<span id="LC289" class="line" lang="plaintext">------atgagccaaaccagggatttacagggaggaaaagctttcggactgctgaaggcc</span>
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<td class="diff-line-num old old_line" data-linenumber="290" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
290
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<pre style="margin: 0;">-<span id="LC290" class="line" lang="plaintext">cagcaggaagagaggctggatgagatcaacaagcaattcctagacgatcccaaatatagc</span>
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<td class="diff-line-num old old_line" data-linenumber="291" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
291
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<pre style="margin: 0;">-<span id="LC291" class="line" lang="plaintext">agtgatgaggatctgccctccaaactggaaggcttcaaagagaaatacatggagtttgac</span>
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<td class="diff-line-num old old_line" data-linenumber="292" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
292
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<pre style="margin: 0;">-<span id="LC292" class="line" lang="plaintext">cttaatggaaatggcgatattgatatcatgtccctgaaacgaatgctggagaaacttgga</span>
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<td class="diff-line-num old old_line" data-linenumber="293" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
293
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<pre style="margin: 0;">-<span id="LC293" class="line" lang="plaintext">gtccccaagactcacctagagctaaagaaattaattggagaggtgtccagtggctccggg</span>
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<td class="diff-line-num old old_line" data-linenumber="294" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
294
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<pre style="margin: 0;">-<span id="LC294" class="line" lang="plaintext">---gagacgttcagctaccctgactttctcaggatgatgctgggcaagagatctgccatc</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="295" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
295
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<pre style="margin: 0;">-<span id="LC295" class="line" lang="plaintext">ctaaaaatgatcctgatgtatgaggaaaaagcgagagaaaaggaa---aagccaacaggc</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="296" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
296
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<pre style="margin: 0;">-<span id="LC296" class="line" lang="plaintext">cccccagccaagaaagctatctctgagttgccctga</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="297" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
297
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC297" class="line" lang="plaintext">[33] BC021539.PE1</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="298" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
298
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC298" class="line" lang="plaintext">------atgagccaaagcagggatttgcagggaggaaaagcttttggactgctgaaggcc</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="299" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
299
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC299" class="line" lang="plaintext">cagcaggaagagaggctggaggggatcaacaagcaattcctcgatgatcccaaatacagc</span>
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300
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC300" class="line" lang="plaintext">aatgatgaggatctgccgtccaaacttgaagccttcaaggtgaaatacatggagtttgat</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="301" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
301
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC301" class="line" lang="plaintext">ctgaatggaaatggagatatcgatattatgtccttgaagcgaatgctggagaaacttggg</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="302" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
302
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<td class="line_content noteable_line old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC302" class="line" lang="plaintext">gttcccaagacccacctagagctgaagagattaattagagaggtgtccagtggctccgag</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="303" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
303
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<td class="line_content noteable_line old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC303" class="line" lang="plaintext">---gagacgttcagctactctgactttctcagaatgatgctgggcaagagatctgccatc</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="304" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
304
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<td class="line_content noteable_line old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC304" class="line" lang="plaintext">ttgagaatgattctgatgtatgaggagaaaaacaaagaacacaag---aggccaactggt</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="305" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
305
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<td class="line_content noteable_line old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC305" class="line" lang="plaintext">cccccagccaagaaagctatctccgagctgccctga</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="306" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
306
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<pre style="margin: 0;">-<span id="LC306" class="line" lang="plaintext">[34] BC024599.PE1</span>
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<td class="diff-line-num old old_line" data-linenumber="307" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
307
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC307" class="line" lang="plaintext">atgtcggtcgcactcagcaacaggttccaaggagggaaggcgttcggtttgctcaaagcc</span>
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<td class="diff-line-num old old_line" data-linenumber="308" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
308
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC308" class="line" lang="plaintext">cggcaggagaagaggctcgaggagatcaatcgggagttcctctgtgaccagaagtacagt</span>
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<td class="diff-line-num old old_line" data-linenumber="309" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
309
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC309" class="line" lang="plaintext">gatgaagagaacctgccggaaaagctcgcagccttcaaagagaaatacatggagtttgac</span>
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<td class="diff-line-num old old_line" data-linenumber="310" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
310
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC310" class="line" lang="plaintext">ctgaataatgaaggcgagattgatctgatgtctttaaagaggatgatggagaagctgggg</span>
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<td class="diff-line-num old old_line" data-linenumber="311" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
311
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC311" class="line" lang="plaintext">gtccccaagacccacctggagatgaagaagatgatctcggaggtgacagggggtgtcagt</span>
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<td class="diff-line-num old old_line" data-linenumber="312" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
312
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC312" class="line" lang="plaintext">---gacaccatctcctaccgagactttgtgaatatgatgctgggcaagcggtcggctgtc</span>
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<td class="diff-line-num old old_line" data-linenumber="313" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
313
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC313" class="line" lang="plaintext">ctcaagctggtcatgatgtttgaaggaaaagccaacgagagcagcccgaagccagctggc</span>
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<td class="diff-line-num old old_line" data-linenumber="314" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
314
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC314" class="line" lang="plaintext">ccacctccagagcgagacatcgccagcctgccttga</span>
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<td class="diff-line-num old old_line" data-linenumber="315" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
315
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC315" class="line" lang="plaintext">[35] BC073304.MGC8069</span>
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<td class="diff-line-num old old_line" data-linenumber="316" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
316
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<pre style="margin: 0;">-<span id="LC316" class="line" lang="plaintext">------atgtcttctaataacattaaacaaggtggcaaagctttcgtgatccaaaaggca</span>
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<td class="diff-line-num old old_line" data-linenumber="317" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
317
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<pre style="margin: 0;">-<span id="LC317" class="line" lang="plaintext">cagcaggagcacagactagaggaggtgaacaaggagttccttaaagatgaaaaatacaag</span>
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<td class="diff-line-num old old_line" data-linenumber="318" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
318
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC318" class="line" lang="plaintext">gatgatgaggacttggataaaaaactgatgtcctttaaaaaaaagtacatggaatttgac</span>
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<td class="diff-line-num old old_line" data-linenumber="319" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
319
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC319" class="line" lang="plaintext">cttaaccaacaaggagagctggatatgatgggcctcaagaaaatgttggagaatctggga</span>
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320
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC320" class="line" lang="plaintext">gccgctaagacccatttagaagttaagaaattgatatatgaagtgacaggaggcaaaagt</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="321" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
321
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC321" class="line" lang="plaintext">---gaggcaatcagctatcaggattttgtaaccatgatgcttggaaaacgttcagccata</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="322" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
322
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC322" class="line" lang="plaintext">atgaaatttatcatgatgtttgagggaaaaaatgaagtcacaagtcccaagcccatgggt</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="323" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
323
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC323" class="line" lang="plaintext">ccaccaccaaagagagacatcagcagcctaccctga</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="324" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
324
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC324" class="line" lang="plaintext">[36] BC074259.MGC8401</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="325" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
325
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC325" class="line" lang="plaintext">------atgtcttccaataacattaaacaaggtggcaaagctttcgtgatccaaaaggcg</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="326" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
326
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<td class="line_content noteable_line old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC326" class="line" lang="plaintext">cagcaggagcacagactggaggaggtgaacaaggagttccttaaagatgaaaaatacaag</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="327" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
327
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<td class="line_content noteable_line old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC327" class="line" lang="plaintext">gatgacgaggacttggataaaaaactgatgtcctttaaaaaaaagtacatggaatttgac</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="328" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
328
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<td class="line_content noteable_line old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC328" class="line" lang="plaintext">cttaaccaccaaggagagctggatatgatgggcctgaagaaaatgatggagaacctggga</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="329" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
329
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC329" class="line" lang="plaintext">gctgctaaaacccatttagaagttaagaaactgatatatgaagtgacgggaggcaaaagt</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="330" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
330
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<pre style="margin: 0;">-<span id="LC330" class="line" lang="plaintext">---gaggcaatcagctaccgggattttgtaaccatgatgctgggaaaacgttctgccgtg</span>
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<td class="diff-line-num old old_line" data-linenumber="331" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
331
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<pre style="margin: 0;">-<span id="LC331" class="line" lang="plaintext">atgaaatttatcatgatgtttgagggaaaaaatgaagtcacatgtcccaagccaaagggt</span>
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<td class="diff-line-num old old_line" data-linenumber="332" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
332
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<pre style="margin: 0;">-<span id="LC332" class="line" lang="plaintext">ccaccacccaagagagacatcagcagccttccctga</span>
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<td class="diff-line-num old old_line" data-linenumber="333" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
333
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<pre style="margin: 0;">-<span id="LC333" class="line" lang="plaintext">[37] BC084814.MGC8401</span>
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<td class="diff-line-num old old_line" data-linenumber="334" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
334
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<pre style="margin: 0;">-<span id="LC334" class="line" lang="plaintext">------atgtcttccaataacattaaacaaggtggcaaagctttcgtgatccaaaaggcg</span>
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335
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<pre style="margin: 0;">-<span id="LC335" class="line" lang="plaintext">cagcaggagcacagactggaggaggtgaacaaggagttccttaaagatgaaaaatacaag</span>
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<td class="diff-line-num old old_line" data-linenumber="336" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
336
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<td class="line_content noteable_line old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC336" class="line" lang="plaintext">gatgacgaggacttggataaaaaactgatgtcctttaaaaaaaagtacatggaatttgac</span>
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<td class="diff-line-num old old_line" data-linenumber="337" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
337
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC337" class="line" lang="plaintext">cttaaccaccaaggagagctggatatgatgggcctgaagaaaatgatggagaacctggga</span>
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<td class="diff-line-num old old_line" data-linenumber="338" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
338
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<pre style="margin: 0;">-<span id="LC338" class="line" lang="plaintext">gctgctaaaacccatttagaagttaagaaactgatatatgaagtgacgggaggcaaaagt</span>
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339
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<pre style="margin: 0;">-<span id="LC339" class="line" lang="plaintext">---gaggcaatcagctaccgggattttgtaaccatgatgctgggaaaacgttctgccgtg</span>
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340
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<pre style="margin: 0;">-<span id="LC340" class="line" lang="plaintext">atgaaatttatcatgatgtttgagggaaaaaatgaagtcacatgtcccaagccaaagggt</span>
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341
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<pre style="margin: 0;">-<span id="LC341" class="line" lang="plaintext">ccaccacccaagagagacatcagcagccttccctga</span>
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<td class="diff-line-num old old_line" data-linenumber="342" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
342
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<pre style="margin: 0;">-<span id="LC342" class="line" lang="plaintext">[38] BC102890.AIF1</span>
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<td class="diff-line-num old old_line" data-linenumber="343" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
343
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<pre style="margin: 0;">-<span id="LC343" class="line" lang="plaintext">------atgagcgaaactagggatttacagggaggaaaagcctttgggctgcggaaagcc</span>
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344
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<pre style="margin: 0;">-<span id="LC344" class="line" lang="plaintext">cagcaggaagagagaatcaatgaaatcaaccagcaattcctggatgatcccaaatacagc</span>
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345
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC345" class="line" lang="plaintext">agtgatgaggacctgccctccaaactggaagccttcaagaagaaatacatggagtttgac</span>
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<td class="diff-line-num old old_line" data-linenumber="346" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
346
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC346" class="line" lang="plaintext">ctgaatgaagatggaggtatcgatatcatgtccctgaagcgaatgatggagaaacttggg</span>
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347
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC347" class="line" lang="plaintext">gttcccaagacccacctggagctaaagaaattaatcatggaggtatccagtggccctggg</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="348" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
348
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC348" class="line" lang="plaintext">---gagactttcagctactctgactttctcaagatgatgttgggcaagagatctgccatt</span>
</pre>
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349
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC349" class="line" lang="plaintext">ctaaaaatgatcctgatgtatgaagagaaagcaagagaacaggag---aagccaacaggt</span>
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350
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC350" class="line" lang="plaintext">ctcccagccaagaaagctatctctgagttgccctga</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="351" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
351
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<pre style="margin: 0;">-<span id="LC351" class="line" lang="plaintext">[39] BC126840.C9ORF58</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="352" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
352
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<pre style="margin: 0;">-<span id="LC352" class="line" lang="plaintext">atgtcggtcgcgttcagcaacaggttccaaggagggaaagccttcggtttgctcaaagcc</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="353" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
353
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC353" class="line" lang="plaintext">cggcaggagaggaggctggccgagatcaaccgggagttcctctgcgaccaaaagtacagt</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="354" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
354
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC354" class="line" lang="plaintext">gatgaagagaacctgccggaaaagctcacagcctttaaagagaagtacatggagtttgac</span>
</pre>
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355
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<pre style="margin: 0;">-<span id="LC355" class="line" lang="plaintext">ctgaacaatgagggagagattgatctgatgtctttgaagaggatgatggagaagcttggg</span>
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356
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<pre style="margin: 0;">-<span id="LC356" class="line" lang="plaintext">gtccccaagacccacctggagatgaagaagatgatctcggaggtgacaggtggggtcagc</span>
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357
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<pre style="margin: 0;">-<span id="LC357" class="line" lang="plaintext">---gacaccatctcctaccgagacttcgtgaacatgatgctggggaagcggtcggcggtc</span>
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358
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<pre style="margin: 0;">-<span id="LC358" class="line" lang="plaintext">cttaagctagtcatgatgtttgaaggaaaagccaacgaaggcagctccaagccagtcggg</span>
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359
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<pre style="margin: 0;">-<span id="LC359" class="line" lang="plaintext">ccccctccagagagagacatcgccagcctgccctga</span>
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<td class="diff-line-num old old_line" data-linenumber="360" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
360
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<pre style="margin: 0;">-<span id="LC360" class="line" lang="plaintext">[40] BX248305.PE3</span>
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<td class="diff-line-num old old_line" data-linenumber="361" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
361
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<pre style="margin: 0;">-<span id="LC361" class="line" lang="plaintext">------atgagccaaaccagggatttacagggaggaaaagctttcggactgctgaaggcc</span>
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362
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<pre style="margin: 0;">-<span id="LC362" class="line" lang="plaintext">cagcaggaagagaggctggatgagatcaacaagcaattcctagacgatcccaaatatagc</span>
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363
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<pre style="margin: 0;">-<span id="LC363" class="line" lang="plaintext">agtgatgaggatctgccctccaaactggaaggcttcaaagagaaatacatggagtttgac</span>
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364
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<pre style="margin: 0;">-<span id="LC364" class="line" lang="plaintext">cttaatggaaatggcgatattgatatcatgtccctgaaacgaatgctggagaaacttgga</span>
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365
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<pre style="margin: 0;">-<span id="LC365" class="line" lang="plaintext">gtccccaagactcacctagagctaaagaaattaattggagaggtgtccagtggctccggg</span>
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366
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<pre style="margin: 0;">-<span id="LC366" class="line" lang="plaintext">---gagacgttcagctaccctgactttctcaggatgatgctgggcaagagatctgccatc</span>
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367
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<pre style="margin: 0;">-<span id="LC367" class="line" lang="plaintext">ctaaaaatgatcctgatgtatgaggaaaaagcgagagaaaaggaa---aagccaacaggc</span>
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368
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<pre style="margin: 0;">-<span id="LC368" class="line" lang="plaintext">cccccagccaagaaagctatctctgagttgccctga</span>
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369
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<pre style="margin: 0;">-<span id="LC369" class="line" lang="plaintext">[41] BX571730.PE3</span>
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<td class="diff-line-num old old_line" data-linenumber="370" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
370
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC370" class="line" lang="plaintext">------atgccttccaacatggacttacaaggcggaaaagccttcgggttgctcaaagct</span>
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371
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<pre style="margin: 0;">-<span id="LC371" class="line" lang="plaintext">cagcagagggacaagctggaggaaatcaataaggagttcatggaagatcagaagtacaga</span>
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<td class="diff-line-num old old_line" data-linenumber="372" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
372
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC372" class="line" lang="plaintext">gacgaagaggacttgcctgaaaagctggattcttttaaaaataaatatgcagagtttgac</span>
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373
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC373" class="line" lang="plaintext">ctgaacgatcaaggggaaatcgacatgatgggcttgaagcgaatgatggagaagttgggt</span>
</pre>
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374
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC374" class="line" lang="plaintext">gtgccaaaaactcatctgcagatgaagaaaatgatctctgaggtgacaggaggctgcagt</span>
</pre>
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375
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC375" class="line" lang="plaintext">---gacaccatcaactacagggattttgtgaaaatgatgctcggcaagcgatcagctgtt</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="376" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
376
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC376" class="line" lang="plaintext">ctcaaactggttatgatgtttgaagacaaagctaatgggtccagctgtaagcctgatggg</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="377" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
377
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC377" class="line" lang="plaintext">cctccacccaaacgtgacatcaccagcctaccatag</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="378" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
378
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC378" class="line" lang="plaintext">[42] BX883046.AIF1</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="379" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
379
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC379" class="line" lang="plaintext">------atgagccagagcaaggatttgcagggaggaaaagcttttggactgctgaaagcc</span>
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<td class="diff-line-num old old_line" data-linenumber="380" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
380
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC380" class="line" lang="plaintext">caacaggaagagaggttggatgggatcaacaagcacttcctcgatgatcccaagtacagc</span>
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<td class="diff-line-num old old_line" data-linenumber="381" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
381
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC381" class="line" lang="plaintext">agtgatgaggatctgcagtccaaactggaggccttcaagacgaagtacatggagtttgat</span>
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<td class="diff-line-num old old_line" data-linenumber="382" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
382
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC382" class="line" lang="plaintext">ctgaatggcaatggagatatcgatattatgtccttgaagcgaatgctggagaaacttggg</span>
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<td class="diff-line-num old old_line" data-linenumber="383" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
383
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC383" class="line" lang="plaintext">gttcccaagacccatctagagctgaagaaattaattagagaggtgtccagtggctccgag</span>
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<td class="diff-line-num old old_line" data-linenumber="384" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
384
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC384" class="line" lang="plaintext">---gagacgttcagttactctgactttctcagaatgatgctgggcaagagatctgccatc</span>
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<td class="diff-line-num old old_line" data-linenumber="385" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
385
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC385" class="line" lang="plaintext">ttgagaatgattctgatgtatgaggagaaaaacaaagaacaccag---aagccaactggt</span>
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<td class="diff-line-num old old_line" data-linenumber="386" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
386
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC386" class="line" lang="plaintext">cccccagccaagaaagctatttctgagttgccctaa</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="387" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
387
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC387" class="line" lang="plaintext">[43] CR762385.PE3</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="388" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
388
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<td class="line_content noteable_line old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC388" class="line" lang="plaintext">------atgccttccaacatggacttacaaggcggaaaagccttcgggttgctcaaagct</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="389" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
389
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<td class="line_content noteable_line old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC389" class="line" lang="plaintext">cagcagagggacaagctggaggaaatcaataaggagttcatggaagatcagaagtacaga</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="390" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
390
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC390" class="line" lang="plaintext">gacgaagaggacttgcctgaaaagctggattcttttaaaaataaatatgcagagtttgac</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="391" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
391
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<td class="line_content noteable_line old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC391" class="line" lang="plaintext">ctgaacgatcaaggggaaatcgacatgatgggcttgaagcgaatgatggagaagttgggt</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="392" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
392
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC392" class="line" lang="plaintext">gtgccaaaaactcatctgcagatgaagaaaatgatctctgaggtgacaggaggctgcagt</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="393" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
393
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC393" class="line" lang="plaintext">---gacaccatcaactacagggattttgtgaaaatgatgctcggcaagcgatcagctgtt</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="394" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
394
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC394" class="line" lang="plaintext">ctcaaactggttatgatgtttgaagacaaagctaatgggtccagctgtaagcctgatggg</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="395" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
395
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC395" class="line" lang="plaintext">cctccacccaaacgtgacatcaccagcctaccatag</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="396" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
396
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC396" class="line" lang="plaintext">[44] CR857925.PE1</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="397" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
397
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC397" class="line" lang="plaintext">atgtcgggcgagctcagcaacaggttccaaggagggaaggcgttcggcttgctcaaagcc</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="398" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
398
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
</td>
<td class="line_content noteable_line old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC398" class="line" lang="plaintext">cggcaggagaggaggctggccgagatcgaccgggagtttctctgtgaccagaagtacagt</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="399" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
399
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
</td>
<td class="line_content noteable_line old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC399" class="line" lang="plaintext">gatgaagagaaccttccagaaaagctcacagccttcaaagagaagtacatggagtttgac</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="400" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
400
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
</td>
<td class="line_content noteable_line old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC400" class="line" lang="plaintext">ctgaacaatgaaggcgagattgacctaatgtctttaaagaggatgatggagaagcttggt</span>
</pre>
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<tr class="line_holder old" id="" style="line-height: 1.6;">
<td class="diff-line-num old old_line" data-linenumber="401" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
401
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
</td>
<td class="line_content noteable_line old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC401" class="line" lang="plaintext">gtccccaagacccacctggagatgaagaagatgatctcagaggtgacaggaggggtcagt</span>
</pre>
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<tr class="line_holder old" id="" style="line-height: 1.6;">
<td class="diff-line-num old old_line" data-linenumber="402" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
402
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
</td>
<td class="line_content noteable_line old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC402" class="line" lang="plaintext">---gacaccatatcctaccgagactttgtgaacatgatgctggggaaacggtcggctgtc</span>
</pre>
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</tr>
<tr class="line_holder old" id="" style="line-height: 1.6;">
<td class="diff-line-num old old_line" data-linenumber="403" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
403
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
</td>
<td class="line_content noteable_line old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC403" class="line" lang="plaintext">ctcaagctagtcatgatgtttgaaggaaaggccaacgagagcagccccaagccagttggc</span>
</pre>
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404
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<pre style="margin: 0;">-<span id="LC404" class="line" lang="plaintext">ccccctccagagagagacattgctagcctgccctga</span>
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405
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<pre style="margin: 0;">-<span id="LC405" class="line" lang="plaintext">[45] CT010265</span>
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406
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<pre style="margin: 0;">-<span id="LC406" class="line" lang="plaintext">------atgagccaaagcagggatttgcagggaggaaaagcttttggactgctgaaggcc</span>
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407
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<pre style="margin: 0;">-<span id="LC407" class="line" lang="plaintext">cagcaggaagagaggctggaggggatcaacaagcaattcctcgatgatcccaaatacagc</span>
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408
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<pre style="margin: 0;">-<span id="LC408" class="line" lang="plaintext">aatgatgaggatctgccgtccaaacttgaagccttcaaggtgaagtacatggagtttgat</span>
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409
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<pre style="margin: 0;">-<span id="LC409" class="line" lang="plaintext">ctgaatggaaatggagatatcgatattatgtccttgaagcgaatgctggagaaacttggg</span>
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410
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<pre style="margin: 0;">-<span id="LC410" class="line" lang="plaintext">gttcccaagacccacctagagctgaagagattaattagagaggtgtccagtggctccgag</span>
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411
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<pre style="margin: 0;">-<span id="LC411" class="line" lang="plaintext">---gagacgttcagctactctgactttctcagaatgatgctgggcaagagatctgccatc</span>
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412
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<pre style="margin: 0;">-<span id="LC412" class="line" lang="plaintext">ttgagaatgattctgatgtatgaggagaaaaacaaagaacacaag---aggccaactggt</span>
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413
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<pre style="margin: 0;">-<span id="LC413" class="line" lang="plaintext">cccccagccaagaaagctatctccgagctgccctag</span>
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414
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<pre style="margin: 0;">-<span id="LC414" class="line" lang="plaintext">[46] CT010385</span>
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415
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<pre style="margin: 0;">-<span id="LC415" class="line" lang="plaintext">------atgagccaaagcagggatttgcagggaggaaaagcttttggactgctgaaggcc</span>
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416
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<pre style="margin: 0;">-<span id="LC416" class="line" lang="plaintext">cagcaggaagagaggctggaggggatcaacaagcaattcctcgatgatcccaaatacagc</span>
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417
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<pre style="margin: 0;">-<span id="LC417" class="line" lang="plaintext">aatgatgaggatctgccgtccaaacttgaagccttcaaggtgaaatacatggagtttgat</span>
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418
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<pre style="margin: 0;">-<span id="LC418" class="line" lang="plaintext">ctgaatggaaatggagatatcgatattatgtccttgaagcgaatgctggagaaacttggg</span>
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419
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<pre style="margin: 0;">-<span id="LC419" class="line" lang="plaintext">gttcccaagacccacctagagctgaagagattaattagagaggtgtccagtggctccgag</span>
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420
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<pre style="margin: 0;">-<span id="LC420" class="line" lang="plaintext">---gagacgttcagctactctgactttctcagaatgatgctgggcaagagatctgccatc</span>
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421
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<pre style="margin: 0;">-<span id="LC421" class="line" lang="plaintext">ttgagaatgattctgatgtatgaggagaaaaacaaagaacacaag---aggccaactggt</span>
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422
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<pre style="margin: 0;">-<span id="LC422" class="line" lang="plaintext">cccccagccaagaaagctatctccgagctgccctag</span>
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423
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<pre style="margin: 0;">-<span id="LC423" class="line" lang="plaintext">[47] D86382.IBA1</span>
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424
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<pre style="margin: 0;">-<span id="LC424" class="line" lang="plaintext">------atgagccaaagcagggatttgcagggaggaaaagcttttggactgctgaaggcc</span>
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425
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<pre style="margin: 0;">-<span id="LC425" class="line" lang="plaintext">cagcaggaagagaggctggaggggatcaacaagcaattcctcgatgatcccaaatacagc</span>
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426
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<pre style="margin: 0;">-<span id="LC426" class="line" lang="plaintext">aatgatgaggatctgccgtccaaacttgaagccttcaaggtgaagtacatggagtttgat</span>
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427
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<pre style="margin: 0;">-<span id="LC427" class="line" lang="plaintext">ctgaatggaaatggagatatcgatattatgtccttgaagcgaatgctggagaaacttggg</span>
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428
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<pre style="margin: 0;">-<span id="LC428" class="line" lang="plaintext">gttcccaagacccacctagagctgaagagattaattagagaggtgtccagtggctccgag</span>
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429
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<pre style="margin: 0;">-<span id="LC429" class="line" lang="plaintext">---gagacgttcagctactctgactttctcagaatgatgctgggcaagagatctgccatc</span>
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430
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<pre style="margin: 0;">-<span id="LC430" class="line" lang="plaintext">ttgagaatgattctgatgtatgaggagaaaaacaaagaacacaag---aggccaactggt</span>
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431
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<pre style="margin: 0;">-<span id="LC431" class="line" lang="plaintext">cccccagccaagaaagctatctccgagctgccctga</span>
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432
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<pre style="margin: 0;">-<span id="LC432" class="line" lang="plaintext">[48] D86438.IBA1</span>
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433
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<pre style="margin: 0;">-<span id="LC433" class="line" lang="plaintext">------atgagccaaaccagggatttacagggaggaaaagctttcggactgctgaaggcc</span>
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434
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<pre style="margin: 0;">-<span id="LC434" class="line" lang="plaintext">cagcaggaagagaggctggatgagatcaacaagcaattcctagacgatcccaaatatagc</span>
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435
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<pre style="margin: 0;">-<span id="LC435" class="line" lang="plaintext">agtgatgaggatctgccctccaaactggaaggcttcaaagagaaatacatggagtttgac</span>
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436
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<pre style="margin: 0;">-<span id="LC436" class="line" lang="plaintext">cttaatggaaatggcgatattgatatcatgtccctgaaacgaatgctggagaaacttgga</span>
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437
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<pre style="margin: 0;">-<span id="LC437" class="line" lang="plaintext">gtccccaagactcacctagagctaaagaaattaattggagaggtgtccagtggctccggg</span>
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438
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<pre style="margin: 0;">-<span id="LC438" class="line" lang="plaintext">---gagacgttcagctaccctgactttctcaggatgatgctgggcaagagatctgccatc</span>
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439
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<pre style="margin: 0;">-<span id="LC439" class="line" lang="plaintext">ctaaaaatgatcctgatgtatgaggaaaaagcgagagaaaaggaa---aagccaacaggc</span>
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440
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<pre style="margin: 0;">-<span id="LC440" class="line" lang="plaintext">cccccagccaagaaagctatctctgagttgccctga</span>
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441
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<pre style="margin: 0;">-<span id="LC441" class="line" lang="plaintext">[49] EF070983.PE1</span>
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442
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<pre style="margin: 0;">-<span id="LC442" class="line" lang="plaintext">------atgagccaaaccagggatttacagggaggaaaagctttcggactgctgaaggcc</span>
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443
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<pre style="margin: 0;">-<span id="LC443" class="line" lang="plaintext">cagcaggaagagaggctggatgagatcaacaagcaattcctagacgatcccaaatatagc</span>
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444
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<pre style="margin: 0;">-<span id="LC444" class="line" lang="plaintext">agtgatgaggatctgccctccaaactggaaggcttcaaagagaaatacatggagtttgac</span>
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445
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<pre style="margin: 0;">-<span id="LC445" class="line" lang="plaintext">cttaatggaaatggcgatattgatatcatgtccctgaaacgaatgctggagaaacttgga</span>
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446
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<pre style="margin: 0;">-<span id="LC446" class="line" lang="plaintext">gtccccaagactcacctagagctaaagaaattaattggagaggtgtccagtggctccggg</span>
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447
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<pre style="margin: 0;">-<span id="LC447" class="line" lang="plaintext">---gagacgttcagctaccctgactttctcaggatgatgctgggcaagagatctgccatc</span>
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448
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<pre style="margin: 0;">-<span id="LC448" class="line" lang="plaintext">ctaaaaatgatcctgatgtatgaggaaaaagcgagagaaaaggaa---aagccaacaggc</span>
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449
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<pre style="margin: 0;">-<span id="LC449" class="line" lang="plaintext">cccccagccaagaaagctatctctgagttgccctga</span>
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450
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<pre style="margin: 0;">-<span id="LC450" class="line" lang="plaintext">[50] U17919.PE1</span>
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451
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<pre style="margin: 0;">-<span id="LC451" class="line" lang="plaintext">------atgagccagagcaaggatttgcagggaggaaaagcttttggactgctgaaagcc</span>
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452
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<pre style="margin: 0;">-<span id="LC452" class="line" lang="plaintext">cagcaggaagagaggttggatgggatcaacaagcacttcctcgatgatcccaagtacagc</span>
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<pre style="margin: 0;">-<span id="LC453" class="line" lang="plaintext">agtgatgaggatctgcagtccaaactggaggccttcaagacgaagtacatggagtttgat</span>
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454
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<pre style="margin: 0;">-<span id="LC454" class="line" lang="plaintext">ctgaatggcaatggagatatcgatattatgtccttgaagcgaatgctggagaaacttggg</span>
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455
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<pre style="margin: 0;">-<span id="LC455" class="line" lang="plaintext">gttcccaagacccatctagagctgaagaaattaattagagaggtgtccagtggctccgag</span>
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456
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<pre style="margin: 0;">-<span id="LC456" class="line" lang="plaintext">---gagacgttcagttactctgactttctcagaatgatgctgggcaagagatctgccatc</span>
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457
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<pre style="margin: 0;">-<span id="LC457" class="line" lang="plaintext">ttgagaatgattctgatgtatgaggagaaaaacaaagaacaccag---aagccaactggt</span>
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458
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<pre style="margin: 0;">-<span id="LC458" class="line" lang="plaintext">cccccagccaagaaagctatttctgagttgccctaa</span>
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459
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<pre style="margin: 0;">-<span id="LC459" class="line" lang="plaintext">[51] U19713.PE1</span>
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460
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<pre style="margin: 0;">-<span id="LC460" class="line" lang="plaintext">------atgagccaaaccagggatttacagggaggaaaagctttcggactgctgaaggcc</span>
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461
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<pre style="margin: 0;">-<span id="LC461" class="line" lang="plaintext">cagcaggaagagaggctggatgagatcaacaagcaattcctagacgatcccaaatatagc</span>
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462
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<pre style="margin: 0;">-<span id="LC462" class="line" lang="plaintext">agtgatgaggatctgccctccaaactggaaggcttcaaagagaaatacatggagtttgac</span>
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463
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<pre style="margin: 0;">-<span id="LC463" class="line" lang="plaintext">cttaatggaaatggcgatattgatatcatgtccctgaaacgaatgctggagaaacttgga</span>
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464
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<pre style="margin: 0;">-<span id="LC464" class="line" lang="plaintext">gtccccaagactcacctagagctaaagaaattaattggagaggtgtccagtggctccggg</span>
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465
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<pre style="margin: 0;">-<span id="LC465" class="line" lang="plaintext">---gagacgttcagctaccctgactttctcaggatgatgctgggcaagagatctgccatc</span>
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466
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<pre style="margin: 0;">-<span id="LC466" class="line" lang="plaintext">ctaaaaatgatcctgatgtatgaggaaaaagcgagagaaaaggaa---aagccaacaggc</span>
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467
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<pre style="margin: 0;">-<span id="LC467" class="line" lang="plaintext">cccccagccaagaaagctatctctgagttgccctga</span>
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468
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<pre style="margin: 0;">-<span id="LC468" class="line" lang="plaintext">[52] 'U49392.AIF-1'</span>
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469
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<pre style="margin: 0;">-<span id="LC469" class="line" lang="plaintext">------atgagccaaaccagggatttacagggaggaaaagctttcggactgctgaaggcc</span>
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470
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<pre style="margin: 0;">-<span id="LC470" class="line" lang="plaintext">cagcaggaagagaggctggatgagatcaacaagcaattcctacacgatcccaaatatagc</span>
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471
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<pre style="margin: 0;">-<span id="LC471" class="line" lang="plaintext">agtgatgaggatctgccctccaaactggaaggcttcaaagagaaatacatggagtttgac</span>
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472
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<pre style="margin: 0;">-<span id="LC472" class="line" lang="plaintext">cttaatggaaatggcgatattgatatcatgtccttgaaacgaatgctggagaaacttgga</span>
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473
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<pre style="margin: 0;">-<span id="LC473" class="line" lang="plaintext">gtccccaagactcacctagagctaaagaaattaattggagaggtgtccagtggctccggg</span>
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474
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<pre style="margin: 0;">-<span id="LC474" class="line" lang="plaintext">---gagacgttcagctaccctgactttctcaggatgatgctgggcaagagatctgccatc</span>
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475
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<pre style="margin: 0;">-<span id="LC475" class="line" lang="plaintext">ctaaaaatgatcctgatgtatgaggaaaaagcgagagaaagg------aaaaccaacacg</span>
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476
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<pre style="margin: 0;">-<span id="LC476" class="line" lang="plaintext">ccccccagccaagaaagccctatctga---------</span>
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477
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<pre style="margin: 0;">-<span id="LC477" class="line" lang="plaintext">[53] U82792.PE1</span>
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478
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<pre style="margin: 0;">-<span id="LC478" class="line" lang="plaintext">------atgagccaaagcagggatttgcagggaggaaaagcttttggactgctgaaggcc</span>
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479
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<pre style="margin: 0;">-<span id="LC479" class="line" lang="plaintext">cagcaggaagagaggctggaggggatcaacaagcaattcctcgatgatcccaaatacagc</span>
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480
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<pre style="margin: 0;">-<span id="LC480" class="line" lang="plaintext">aatgatgaggatctgccgtccaaacttgaagccttcaaggtgaagtacatggagtttgat</span>
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481
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<pre style="margin: 0;">-<span id="LC481" class="line" lang="plaintext">ctgaatggaaatggagatatcgatattatgtccttgaagcgaatgctggagaaacttggg</span>
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482
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<pre style="margin: 0;">-<span id="LC482" class="line" lang="plaintext">gttcccaagacccacctagagctgaagagattaattagagaggtgtccagtggctccgag</span>
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483
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<pre style="margin: 0;">-<span id="LC483" class="line" lang="plaintext">---gagacgttcagctactctgactttctcagaatgatgctgggcaagagatctgccatc</span>
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484
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<pre style="margin: 0;">-<span id="LC484" class="line" lang="plaintext">ttgagaatgattctgatgtatgaggagaaaaacaaagaacacaag---aggccaactggt</span>
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485
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<pre style="margin: 0;">-<span id="LC485" class="line" lang="plaintext">cccccagccaagaaagctatctccgagctgccctga</span>
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486
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<pre style="margin: 0;">-<span id="LC486" class="line" lang="plaintext">[54] Y14768.PE3</span>
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487
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<pre style="margin: 0;">-<span id="LC487" class="line" lang="plaintext">------atgagccaaaccagggatttacagggaggaaaagctttcggactgctgaaggcc</span>
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488
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<pre style="margin: 0;">-<span id="LC488" class="line" lang="plaintext">cagcaggaagagaggctggatgagatcaacaagcaattcctagacgatcccaaatatagc</span>
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489
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<pre style="margin: 0;">-<span id="LC489" class="line" lang="plaintext">agtgatgaggatctgccctccaaactggaaggcttcaaagagaaatacatggagtttgac</span>
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490
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<pre style="margin: 0;">-<span id="LC490" class="line" lang="plaintext">cttaatggaaatggcgatattgatatcatgtccctgaaacgaatgctggagaaacttgga</span>
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491
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<pre style="margin: 0;">-<span id="LC491" class="line" lang="plaintext">gtccccaagactcacctagagctaaagaaattaattggagaggtgtccagtggctccggg</span>
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492
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<pre style="margin: 0;">-<span id="LC492" class="line" lang="plaintext">---gagacgttcagctaccctgactttctcaggatgatgctgggcaagagatctgccatc</span>
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493
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<pre style="margin: 0;">-<span id="LC493" class="line" lang="plaintext">ctaaaaatgatcctgatgtatgaggaaaaagcgagagaaaaggaa---aagccaacaggc</span>
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494
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<pre style="margin: 0;">-<span id="LC494" class="line" lang="plaintext">cccccagccaagaaagctatctctgagttgccctga</span>
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495
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<pre style="margin: 0;">-<span id="LC495" class="line" lang="plaintext">;</span>
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496
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<pre style="margin: 0;">-<span id="LC496" class="line" lang="plaintext">END;</span>
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497
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<pre style="margin: 0;">-<span id="LC497" class="line" lang="plaintext">BEGIN NOTES;</span>
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498
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<pre style="margin: 0;">-<span id="LC498" class="line" lang="plaintext"> TEXT TAXON=1 TEXT='D82069.PE1 CDS /codon_start=1 /product="iba1, ionized calcium binding adapter mo</span>
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499
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<pre style="margin: 0;">-<span id="LC499" class="line" lang="plaintext">';</span>
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500
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<pre style="margin: 0;">-<span id="LC500" class="line" lang="plaintext"> TEXT TAXON=2 TEXT='AB019540.AIF-1 CDS /codon_start=1 /transl_table=1 /gene="AIF-1" /product="allogr</span>
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501
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<pre style="margin: 0;">-<span id="LC501" class="line" lang="plaintext">';</span>
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<pre style="margin: 0;">-<span id="LC502" class="line" lang="plaintext"> TEXT TAXON=3 TEXT='AB000818.PE1 CDS /codon_start=1 /transl_table=1 /product="MRF-1" /db_xref="GOA:P</span>
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<pre style="margin: 0;">-<span id="LC504" class="line" lang="plaintext"> TEXT TAXON=4 TEXT='AB012309.PE1 CDS /codon_start=1 /transl_table=1 /product="allograft inflammatory</span>
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<pre style="margin: 0;">-<span id="LC506" class="line" lang="plaintext"> TEXT TAXON=5 TEXT='AB013745.AIF-1 CDS /codon_start=1 /transl_table=1 /gene="AIF-1" /product="allogr</span>
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<pre style="margin: 0;">-<span id="LC508" class="line" lang="plaintext"> TEXT TAXON=6 TEXT='AB035322 Mus musculus mRNA for ionized calcium binding adapter molecule 2 (Iba2)</span>
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<pre style="margin: 0;">-<span id="LC510" class="line" lang="plaintext"> TEXT TAXON=7 TEXT='AB036423.IBA1 CDS /codon_start=1 /transl_table=1 /gene="iba1" /product="ionized </span>
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<pre style="margin: 0;">-<span id="LC512" class="line" lang="plaintext"> TEXT TAXON=8 TEXT='AB036423.PE2 CDS /codon_start=1 /transl_table=1 /gene="iba1" /product="ionized c</span>
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<pre style="margin: 0;">-<span id="LC514" class="line" lang="plaintext"> TEXT TAXON=9 TEXT='AB094629.IBA2 CDS /codon_start=1 /transl_table=1 /gene="iba2" /product="ionized </span>
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<pre style="margin: 0;">-<span id="LC516" class="line" lang="plaintext"> TEXT TAXON=10 TEXT='AB128049.AIF1 CDS /codon_start=1 /transl_table=1 /gene="AIF1" /product="allograf</span>
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<pre style="margin: 0;">-<span id="LC518" class="line" lang="plaintext"> TEXT TAXON=11 TEXT='AF074959.PE1 CDS /codon_start=1 /product="allograft inflammatory factor-1" /note</span>
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<pre style="margin: 0;">-<span id="LC520" class="line" lang="plaintext"> TEXT TAXON=12 TEXT='AF109719.PE7 CDS /codon_start=1 /product="AIF-1" /note="allograft inflammatory f</span>
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<pre style="margin: 0;">-<span id="LC522" class="line" lang="plaintext"> TEXT TAXON=13 TEXT='AF129756.PE18 CDS /codon_start=1 /product="AIF-1" /note="anti-inflammatory facto</span>
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<pre style="margin: 0;">-<span id="LC524" class="line" lang="plaintext"> TEXT TAXON=14 TEXT='AF348450.PE1 CDS /codon_start=1 /product="allograft inflammatory factor-1" /note</span>
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<pre style="margin: 0;">-<span id="LC526" class="line" lang="plaintext"> TEXT TAXON=15 TEXT='AJ506968.AIF1 CDS /gene="aif1" /product="allograft inflammatory factor 1" /db_xr</span>
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<pre style="margin: 0;">-<span id="LC528" class="line" lang="plaintext"> TEXT TAXON=16 TEXT='AK006184.PE1 CDS /codon_start=1 /transl_table=1 /note="ALLOGRAFT INFLAMMATORY FA</span>
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<pre style="margin: 0;">-<span id="LC530" class="line" lang="plaintext"> TEXT TAXON=17 TEXT='AK006562.PE1 CDS /codon_start=1 /transl_table=1 /note="ALLOGRAFT INFLAMMATORY FA</span>
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<pre style="margin: 0;">-<span id="LC534" class="line" lang="plaintext"> TEXT TAXON=19 TEXT='AK028955.PE1 CDS /codon_start=1 /transl_table=1 /note="IONIZED CALCIUM BINDING A</span>
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<pre style="margin: 0;">-<span id="LC536" class="line" lang="plaintext"> TEXT TAXON=20 TEXT='AK045539.PE1 CDS /codon_start=1 /transl_table=1 /note="IONIZED CALCIUM BINDING A</span>
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<pre style="margin: 0;">-<span id="LC552" class="line" lang="plaintext"> TEXT TAXON=28 TEXT='AL833896.PE1 CDS /codon_start=1 /gene="DKFZp761N011" /product="hypothetical prot</span>
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<pre style="margin: 0;">-<span id="LC554" class="line" lang="plaintext"> TEXT TAXON=29 TEXT='AL928893.PE3 CDS /locus_tag="RP23-55I14.2-001" /standard_name="OTTMUSP0000001316</span>
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<pre style="margin: 0;">-<span id="LC556" class="line" lang="plaintext"> TEXT TAXON=30 TEXT='AY359067.PE1 CDS /codon_start=1 /locus_tag="UNQ672" /product="SGEL672" /note="PR</span>
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<pre style="margin: 0;">-<span id="LC558" class="line" lang="plaintext"> TEXT TAXON=31 TEXT='BA000025.AIF1 CDS /codon_start=1 /transl_table=1 /gene="AIF1" /product="Allograf</span>
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<pre style="margin: 0;">-<span id="LC560" class="line" lang="plaintext"> TEXT TAXON=32 TEXT='BC009474.AIF1 CDS /codon_start=1 /gene="AIF1" /product="allograft inflammatory f</span>
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<pre style="margin: 0;">-<span id="LC562" class="line" lang="plaintext"> TEXT TAXON=33 TEXT='BC021539.PE1 CDS /codon_start=1 /product="Aif1 protein" /db_xref="GOA:O70200"</span>
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<pre style="margin: 0;">-<span id="LC572" class="line" lang="plaintext"> TEXT TAXON=38 TEXT='BC102890.AIF1 CDS /codon_start=1 /gene="AIF1" /product="allograft inflammatory f</span>
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<pre style="margin: 0;">-<span id="LC574" class="line" lang="plaintext"> TEXT TAXON=39 TEXT='BC126840.C9ORF58 CDS /codon_start=1 /gene="C9orf58" /product="ionized calcium bi</span>
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<pre style="margin: 0;">-<span id="LC576" class="line" lang="plaintext"> TEXT TAXON=40 TEXT='BX248305.PE3 CDS /gene="AIF1" /locus_tag="DASS-82G15.2-001" /standard_name="OTTH</span>
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<pre style="margin: 0;">-<span id="LC578" class="line" lang="plaintext"> TEXT TAXON=41 TEXT='BX571730.PE3 CDS /gene="DKEY-35I22.4" /locus_tag="DKEY-35I22.4-001" /standard_na</span>
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<pre style="margin: 0;">-<span id="LC580" class="line" lang="plaintext"> TEXT TAXON=42 TEXT='BX883046.AIF1 CDS /codon_start=1 /gene="Aif1" /product="allograft inflammatory f</span>
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<pre style="margin: 0;">-<span id="LC582" class="line" lang="plaintext"> TEXT TAXON=43 TEXT='CR762385.PE3 CDS /gene="DKEY-35I22.4" /locus_tag="DKEY-35I22.4-001" /standard_na</span>
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<pre style="margin: 0;">-<span id="LC584" class="line" lang="plaintext"> TEXT TAXON=44 TEXT='CR857925.PE1 CDS /codon_start=1 /gene="DKFZp469A1629" /product="hypothetical pro</span>
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<pre style="margin: 0;">-<span id="LC586" class="line" lang="plaintext"> TEXT TAXON=45 TEXT='CT010265 Mus musculus full open reading frame cDNA clone RZPDo836F0551D for gene</span>
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<pre style="margin: 0;">-<span id="LC588" class="line" lang="plaintext"> TEXT TAXON=46 TEXT='CT010385 Mus musculus full open reading frame cDNA clone RZPDo836E0453D for gene</span>
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<pre style="margin: 0;">-<span id="LC590" class="line" lang="plaintext"> TEXT TAXON=47 TEXT='D86382.IBA1 CDS /transl_table=1 /gene="iba1" /product="Iba1 (ionized calcium bin</span>
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<pre style="margin: 0;">-<span id="LC592" class="line" lang="plaintext"> TEXT TAXON=48 TEXT='D86438.IBA1 CDS /codon_start=1 /transl_table=1 /gene="iba1" /product="Iba1 (ioni</span>
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<pre style="margin: 0;">-<span id="LC594" class="line" lang="plaintext"> TEXT TAXON=49 TEXT='EF070983.PE1 CDS /codon_start=1 /product="allograft inflammatory factor 1 isofor</span>
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<pre style="margin: 0;">-<span id="LC596" class="line" lang="plaintext"> TEXT TAXON=50 TEXT='U17919.PE1 CDS /codon_start=1 /product="allograft inflammatory factor-1" /note="</span>
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<pre style="margin: 0;">-<span id="LC598" class="line" lang="plaintext"> TEXT TAXON=51 TEXT='U19713.PE1 CDS /codon_start=1 /product="allograft-inflammatory factor-1" /db_xre</span>
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<pre style="margin: 0;">-<span id="LC600" class="line" lang="plaintext"> TEXT TAXON=52 TEXT='U49392.AIF-1 CDS /codon_start=1 /gene="AIF-1" /product="allograft inflammatory f</span>
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<pre style="margin: 0;">-<span id="LC602" class="line" lang="plaintext"> TEXT TAXON=53 TEXT='U82792.PE1 CDS /codon_start=1 /product="allograft inflammatory factor-1" /note="</span>
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<a href="https://salsa.debian.org/med-team/seaview/commit/a0b9b418e62412d7cbd21fa38131eebe125af31d#52273abf25871d8fe4213e1c91f4ad2bf44aa78c"><strong>seaview.appdata.xml</strong>
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<pre style="margin: 0;">-<span id="LC1" class="line" lang="xml"><span class="cp" style="color: #999; font-weight: 600;"><?xml version="1.0" encoding="UTF-8"?></span></span>
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<pre style="margin: 0;">-<span id="LC2" class="line" lang="xml"><span class="c" style="color: #998; font-style: italic;"><!-- Copyright 2015 Manolo Gouy <manolo.gouy_at_univ-lyon1.fr> --></span></span>
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<pre style="margin: 0;">-<span id="LC3" class="line" lang="xml"><span class="nt" style="color: navy;"><component</span> <span class="na" style="color: teal;">type=</span><span class="s" style="color: #d14;">"desktop"</span><span class="nt" style="color: navy;">></span></span>
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<pre style="margin: 0;">-<span id="LC4" class="line" lang="xml"> <span class="nt" style="color: navy;"><id></span>seaview.desktop<span class="nt" style="color: navy;"></id></span></span>
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<pre style="margin: 0;">-<span id="LC5" class="line" lang="xml"> <span class="nt" style="color: navy;"><metadata_license></span>CC0-1.0<span class="nt" style="color: navy;"></metadata_license></span></span>
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<pre style="margin: 0;">-<span id="LC6" class="line" lang="xml"> <span class="nt" style="color: navy;"><project_license></span>GPL-3.0<span class="nt" style="color: navy;"></project_license></span></span>
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<pre style="margin: 0;">-<span id="LC7" class="line" lang="xml"> <span class="nt" style="color: navy;"><name></span>SeaView<span class="nt" style="color: navy;"></name></span></span>
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<pre style="margin: 0;">-<span id="LC8" class="line" lang="xml"> <span class="nt" style="color: navy;"><summary></span>GUI for multiple sequence alignment and molecular phylogeny<span class="nt" style="color: navy;"></summary></span></span>
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<pre style="margin: 0;">-<span id="LC9" class="line" lang="xml"> <span class="nt" style="color: navy;"><description></span></span>
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<pre style="margin: 0;">-<span id="LC10" class="line" lang="xml"><span class="nt" style="color: navy;"><p></span>SeaView is a multiplatform, graphical user interface for multiple sequence alignment and molecular phylogeny.<span class="nt" style="color: navy;"></p></span></span>
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<pre style="margin: 0;">-<span id="LC11" class="line" lang="xml"><span class="nt" style="color: navy;"><ul></span></span>
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<pre style="margin: 0;">-<span id="LC12" class="line" lang="xml"> <span class="nt" style="color: navy;"><li></span>SeaView reads and writes various file formats (NEXUS, MSF, CLUSTAL, FASTA, PHYLIP,</span>
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<pre style="margin: 0;">-<span id="LC13" class="line" lang="xml"> MASE, Newick) of DNA and protein sequences and of phylogenetic trees.<span class="nt" style="color: navy;"></li></span></span>
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<pre style="margin: 0;">-<span id="LC14" class="line" lang="xml"> <span class="nt" style="color: navy;"><li></span>SeaView drives programs muscle or Clustal-Omega for multiple sequence alignment, </span>
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<pre style="margin: 0;">-<span id="LC15" class="line" lang="xml"> and also allows to use any external alignment algorithm able to read and write FASTA-formatted files.<span class="nt" style="color: navy;"></li></span></span>
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<pre style="margin: 0;">-<span id="LC16" class="line" lang="xml"> <span class="nt" style="color: navy;"><li></span>Seaview drives the Gblocks program to select blocks of evolutionarily conserved sites.<span class="nt" style="color: navy;"></li></span></span>
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<pre style="margin: 0;">-<span id="LC17" class="line" lang="xml"> <span class="nt" style="color: navy;"><li></span>SeaView computes phylogenetic trees by:<span class="nt" style="color: navy;"></li></span></span>
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<pre style="margin: 0;">-<span id="LC18" class="line" lang="xml"> <span class="nt" style="color: navy;"><li></span>- parsimony, using PHYLIP's dnapars/protpars algorithm,<span class="nt" style="color: navy;"></li></span></span>
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<pre style="margin: 0;">-<span id="LC19" class="line" lang="xml"> <span class="nt" style="color: navy;"><li></span>- distance, with NJ or BioNJ algorithms on a variety of evolutionary distances,<span class="nt" style="color: navy;"></li></span></span>
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<pre style="margin: 0;">-<span id="LC20" class="line" lang="xml"> <span class="nt" style="color: navy;"><li></span>- maximum likelihood, driving program PhyML 3.1.<span class="nt" style="color: navy;"></li></span></span>
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<pre style="margin: 0;">-<span id="LC21" class="line" lang="xml"> <span class="nt" style="color: navy;"><li></span>SeaView prints and draws phylogenetic trees on screen, SVG, PDF or PostScript files.<span class="nt" style="color: navy;"></li></span></span>
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<pre style="margin: 0;">-<span id="LC22" class="line" lang="xml"> <span class="nt" style="color: navy;"><li></span>SeaView allows to download sequences from EMBL/GenBank/UniProt using the Internet.<span class="nt" style="color: navy;"></li></span></span>
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<pre style="margin: 0;">-<span id="LC23" class="line" lang="xml"><span class="nt" style="color: navy;"></ul></span></span>
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<pre style="margin: 0;">-<span id="LC24" class="line" lang="xml"> <span class="nt" style="color: navy;"></description></span></span>
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<pre style="margin: 0;">-<span id="LC25" class="line" lang="xml"> <span class="nt" style="color: navy;"><screenshots></span></span>
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<pre style="margin: 0;">-<span id="LC26" class="line" lang="xml"> <span class="nt" style="color: navy;"><screenshot</span> <span class="na" style="color: teal;">type=</span><span class="s" style="color: #d14;">"default"</span><span class="nt" style="color: navy;">></span></span>
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<pre style="margin: 0;">-<span id="LC27" class="line" lang="xml"> <span class="nt" style="color: navy;"><image></span>http://doua.prabi.fr/binaries/seaview4.png<span class="nt" style="color: navy;"></image></span></span>
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<pre style="margin: 0;">-<span id="LC28" class="line" lang="xml"> <span class="nt" style="color: navy;"><caption></span>The main alignment window used in the color-by-codon mode<span class="nt" style="color: navy;"></caption></span></span>
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<pre style="margin: 0;">-<span id="LC29" class="line" lang="xml"> <span class="nt" style="color: navy;"></screenshot></span></span>
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<pre style="margin: 0;">-<span id="LC30" class="line" lang="xml"> <span class="nt" style="color: navy;"><screenshot></span></span>
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<pre style="margin: 0;">-<span id="LC31" class="line" lang="xml"> <span class="nt" style="color: navy;"><image></span>http://doua.prabi.fr/binaries/seaview-tree.png<span class="nt" style="color: navy;"></image></span></span>
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<pre style="margin: 0;">-<span id="LC32" class="line" lang="xml"> <span class="nt" style="color: navy;"><caption></span>The tree window with some zoom-in applied<span class="nt" style="color: navy;"></caption></span></span>
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<pre style="margin: 0;">-<span id="LC33" class="line" lang="xml"> <span class="nt" style="color: navy;"></screenshot></span></span>
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<pre style="margin: 0;">-<span id="LC34" class="line" lang="xml"> <span class="nt" style="color: navy;"><screenshot></span></span>
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<pre style="margin: 0;">-<span id="LC35" class="line" lang="xml"> <span class="nt" style="color: navy;"><image></span> http://doua.prabi.fr/software/seaview_data/PhyML-dialog.png<span class="nt" style="color: navy;"></image></span></span>
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<pre style="margin: 0;">-<span id="LC36" class="line" lang="xml"> <span class="nt" style="color: navy;"><caption></span>Dialog window to perform Maximum-Likelihood tree-building<span class="nt" style="color: navy;"></caption></span></span>
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<pre style="margin: 0;">-<span id="LC37" class="line" lang="xml"> <span class="nt" style="color: navy;"></screenshot></span></span>
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<pre style="margin: 0;">-<span id="LC38" class="line" lang="xml"> <span class="nt" style="color: navy;"></screenshots></span></span>
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<pre style="margin: 0;">-<span id="LC39" class="line" lang="xml"> <span class="nt" style="color: navy;"><url</span> <span class="na" style="color: teal;">type=</span><span class="s" style="color: #d14;">"homepage"</span><span class="nt" style="color: navy;">></span>http://doua.prabi.fr/software/seaview<span class="nt" style="color: navy;"></url></span></span>
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<pre style="margin: 0;">-<span id="LC40" class="line" lang="xml"> <span class="nt" style="color: navy;"><updatecontact></span>manolo.gouy_at_univ-lyon1.fr<span class="nt" style="color: navy;"></updatecontact></span></span>
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<pre style="margin: 0;">-<span id="LC41" class="line" lang="xml"> </span>
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<pre style="margin: 0;">-<span id="LC42" class="line" lang="xml"> <span class="nt" style="color: navy;"><developer_name></span>Manolo Gouy<span class="nt" style="color: navy;"></developer_name></span></span>
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<pre style="margin: 0;">-<span id="LC43" class="line" lang="xml"></span>
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<pre style="margin: 0;">-<span id="LC44" class="line" lang="xml"> <span class="nt" style="color: navy;"><keywords></span></span>
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<pre style="margin: 0;">-<span id="LC45" class="line" lang="xml"> <span class="nt" style="color: navy;"><keyword></span>molecular phylogeny<span class="nt" style="color: navy;"></keyword></span></span>
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<pre style="margin: 0;">-<span id="LC46" class="line" lang="xml"> <span class="nt" style="color: navy;"><keyword></span>phylogenetic tree<span class="nt" style="color: navy;"></keyword></span></span>
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<pre style="margin: 0;">-<span id="LC47" class="line" lang="xml"> <span class="nt" style="color: navy;"><keyword></span>sequence alignment<span class="nt" style="color: navy;"></keyword></span></span>
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<pre style="margin: 0;">-<span id="LC48" class="line" lang="xml"> <span class="nt" style="color: navy;"><keyword></span>parsimony<span class="nt" style="color: navy;"></keyword></span></span>
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<pre style="margin: 0;">-<span id="LC49" class="line" lang="xml"> <span class="nt" style="color: navy;"><keyword></span>neighbor-joining/keyword></span>
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<pre style="margin: 0;">-<span id="LC50" class="line" lang="xml"> <span class="nt" style="color: navy;"><keyword></span>maximum likelihood<span class="nt" style="color: navy;"></keyword></span></span>
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<pre style="margin: 0;">-<span id="LC51" class="line" lang="xml"> <span class="nt" style="color: navy;"></keywords></span></span>
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<pre style="margin: 0;">-<span id="LC52" class="line" lang="xml"></span>
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<pre style="margin: 0;">-<span id="LC53" class="line" lang="xml"><span class="nt" style="color: navy;"></component></span></span></pre>
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<a href="https://salsa.debian.org/med-team/seaview/commit/a0b9b418e62412d7cbd21fa38131eebe125af31d#f4db9ac97fe81532a06eccd693e2dca4aced5c41"><strong>seaview.cxx</strong></a>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -310,6 +310,7 @@ int main(int argc, char *argv[])</td>
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<pre style="margin: 0;"> <span id="LC310" class="line" lang="cpp"> <span class="s" style="color: #d14;">" Use '-' as last argument to read alignment from standard input</span><span class="se" style="color: #d14;">\n</span><span class="s" style="color: #d14;">"</span></span>
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<pre style="margin: 0;"> <span id="LC311" class="line" lang="cpp"> <span class="s" style="color: #d14;">"-concatenate align1,... name(s) of alignment files to add at the end of the input alignment</span><span class="se" style="color: #d14;">\n</span><span class="s" style="color: #d14;">"</span></span>
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<pre style="margin: 0;"> <span id="LC312" class="line" lang="cpp"> <span class="s" style="color: #d14;">"-by_rank identify sequences by their rank in alignments (rather than by their name)</span><span class="se" style="color: #d14;">\n</span><span class="s" style="color: #d14;">"</span></span>
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<pre style="margin: 0;">+<span id="LC313" class="line" lang="cpp"> <span class="s" style="color: #d14;">"-record_partition record the locations of the concatenated pieces in the final concatenate</span><span class="se" style="color: #d14;">\n</span><span class="s" style="color: #d14;">"</span></span>
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<pre style="margin: 0;"> <span id="LC314" class="line" lang="cpp"> <span class="s" style="color: #d14;">"-output_format fmt format of the concatenated alignment (mase, phylip, clustal, msf, fasta, or nexus)</span><span class="se" style="color: #d14;">\n</span><span class="s" style="color: #d14;">"</span></span>
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<pre style="margin: 0;"> <span id="LC315" class="line" lang="cpp"> <span class="s" style="color: #d14;">"-o fname use fname as name of the concatenated alignment (default is built from input filename)</span><span class="se" style="color: #d14;">\n</span><span class="s" style="color: #d14;">"</span></span>
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<pre style="margin: 0;"> <span id="LC316" class="line" lang="cpp"> <span class="s" style="color: #d14;">"-o - write the concatenated alignment to standard output</span><span class="se" style="color: #d14;">\n</span><span class="s" style="color: #d14;">"</span></span>
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<td class="diff-line-num unfold js-unfold new_line" data-linenumber="1053" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -1052,7 +1053,10 @@ else if(view->draw_names == -2) { /* ecrire tous les noms mais rien qu'eux */</td>
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1052
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1053
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<pre style="margin: 0;"> <span id="LC1053" class="line" lang="cpp"> <span class="p">}</span></span>
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1053
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<pre style="margin: 0;"> <span id="LC1054" class="line" lang="cpp"><span class="k" style="font-weight: 600;">else</span> <span class="p">{</span> <span class="cm" style="color: #998; font-style: italic;">/* ecrire un seul nom */</span></span>
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1054
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<pre style="margin: 0;"> <span id="LC1055" class="line" lang="cpp"> <span class="n" style="color: #333;">debut</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">fin</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">view</span><span class="o" style="font-weight: 600;">-></span><span class="n" style="color: #333;">draw_names</span> <span class="o" style="font-weight: 600;">-</span> <span class="mi" style="color: #099;">1</span><span class="p">;</span></span>
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<pre style="margin: 0;">-<span id="LC1055" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">if</span><span class="p">(</span><span class="n" style="color: #333;">debut</span> <span class="o" style="font-weight: 600;"><</span> <span class="n" style="color: #333;">view</span><span class="o" style="font-weight: 600;">-></span><span class="n" style="color: #333;">first_seq</span> <span class="o" style="font-weight: 600;">-</span> <span class="mi" style="color: #099;">1</span><span class="p">)</span> <span class="k" style="font-weight: 600;">return</span><span class="p">;</span></span>
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<pre style="margin: 0;">+<span id="LC1056" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">if</span> <span class="p">(</span><span class="n" style="color: #333;">debut</span> <span class="o" style="font-weight: 600;"><</span> <span class="n" style="color: #333;">view</span><span class="o" style="font-weight: 600;">-></span><span class="n" style="color: #333;">first_seq</span> <span class="o" style="font-weight: 600;">-</span> <span class="mi" style="color: #099;">1</span><span class="p">)</span> <span class="p">{</span></span>
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1057
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<pre style="margin: 0;">+<span id="LC1057" class="line" lang="cpp"> <span class="n" style="color: #333;">fl_pop_clip</span><span class="p">();</span></span>
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1058
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<pre style="margin: 0;">+<span id="LC1058" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">return</span><span class="p">;</span></span>
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1059
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<pre style="margin: 0;">+<span id="LC1059" class="line" lang="cpp"> <span class="p">}</span></span>
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1056
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1060
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<pre style="margin: 0;"> <span id="LC1060" class="line" lang="cpp"> <span class="n" style="color: #333;">y</span> <span class="o" style="font-weight: 600;">+=</span> <span class="n" style="color: #333;">view</span><span class="o" style="font-weight: 600;">-></span><span class="n" style="color: #333;">line_height</span> <span class="o" style="font-weight: 600;">*</span> <span class="p">(</span><span class="n" style="color: #333;">view</span><span class="o" style="font-weight: 600;">-></span><span class="n" style="color: #333;">draw_names</span> <span class="o" style="font-weight: 600;">-</span> <span class="n" style="color: #333;">view</span><span class="o" style="font-weight: 600;">-></span><span class="n" style="color: #333;">first_seq</span><span class="p">);</span></span>
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1057
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1061
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<pre style="margin: 0;"> <span id="LC1061" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">if</span><span class="p">(</span> <span class="o" style="font-weight: 600;">!</span><span class="n" style="color: #333;">view</span><span class="o" style="font-weight: 600;">-></span><span class="n" style="color: #333;">sel_seqs</span><span class="p">[</span><span class="n" style="color: #333;">view</span><span class="o" style="font-weight: 600;">-></span><span class="n" style="color: #333;">draw_names</span> <span class="o" style="font-weight: 600;">-</span> <span class="mi" style="color: #099;">1</span><span class="p">]</span> <span class="p">)</span> <span class="p">{</span></span>
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1062
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<pre style="margin: 0;"> <span id="LC1062" class="line" lang="cpp"> <span class="n" style="color: #333;">fl_color</span><span class="p">(</span><span class="n" style="color: #333;">ob</span><span class="o" style="font-weight: 600;">-></span><span class="n" style="color: #333;">color</span><span class="p">());</span></span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -4047,7 +4051,7 @@ else if(view->mod_comment_line) {</td>
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4047
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4051
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<pre style="margin: 0;"> <span id="LC4051" class="line" lang="cpp"> <span class="p">}</span></span>
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4048
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4052
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<pre style="margin: 0;"> <span id="LC4052" class="line" lang="cpp"><span class="k" style="font-weight: 600;">else</span> <span class="p">{</span></span>
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4049
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4053
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<pre style="margin: 0;"> <span id="LC4053" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">if</span><span class="p">(</span><span class="n" style="color: #333;">view</span><span class="o" style="font-weight: 600;">-></span><span class="n" style="color: #333;">tot_seqs</span> <span class="o" style="font-weight: 600;">==</span> <span class="mi" style="color: #099;">0</span><span class="p">)</span> <span class="p">{</span></span>
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4050
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<pre style="margin: 0;">-<span id="LC4050" class="line" lang="cpp"><span class="cp" style="color: #999; font-weight: 600;">#define DRAG_MESS "alignment<span class="idiff left right"> file drag</span> zone"</span></span>
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<pre style="margin: 0;">+<span id="LC4054" class="line" lang="cpp"><span class="cp" style="color: #999; font-weight: 600;">#define DRAG_MESS "alignment<span class="idiff left right">/tree file drop</span> zone"</span></span>
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4051
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4055
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<pre style="margin: 0;"> <span id="LC4055" class="line" lang="cpp"> <span class="n" style="color: #333;">fl_color</span><span class="p">(</span><span class="n" style="color: #333;">FL_WHITE</span><span class="p">);</span></span>
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4056
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<pre style="margin: 0;"> <span id="LC4056" class="line" lang="cpp"> <span class="n" style="color: #333;">fl_font</span><span class="p">(</span><span class="n" style="color: #333;">FL_TIMES_BOLD_ITALIC</span><span class="p">,</span> <span class="mi" style="color: #099;">28</span> <span class="p">);</span></span>
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4053
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4057
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<pre style="margin: 0;"> <span id="LC4057" class="line" lang="cpp"> <span class="n" style="color: #333;">fl_draw</span><span class="p">(</span><span class="n" style="color: #333;">DRAG_MESS</span><span class="p">,</span> <span class="p">(</span><span class="kt" style="color: #458; font-weight: 600;">int</span><span class="p">)(</span><span class="k" style="font-weight: 600;">this</span><span class="o" style="font-weight: 600;">-></span><span class="n" style="color: #333;">x</span><span class="p">()</span><span class="o" style="font-weight: 600;">+</span><span class="k" style="font-weight: 600;">this</span><span class="o" style="font-weight: 600;">-></span><span class="n" style="color: #333;">w</span><span class="p">()</span><span class="o" style="font-weight: 600;">/</span><span class="mi" style="color: #099;">2</span><span class="o" style="font-weight: 600;">-</span><span class="n" style="color: #333;">fl_width</span><span class="p">(</span><span class="n" style="color: #333;">DRAG_MESS</span><span class="p">)</span><span class="o" style="font-weight: 600;">/</span><span class="mi" style="color: #099;">2</span> <span class="o" style="font-weight: 600;">+</span> <span class="mf" style="color: #099;">0.5</span><span class="p">),</span> <span class="k" style="font-weight: 600;">this</span><span class="o" style="font-weight: 600;">-></span><span class="n" style="color: #333;">y</span><span class="p">()</span><span class="o" style="font-weight: 600;">+</span><span class="k" style="font-weight: 600;">this</span><span class="o" style="font-weight: 600;">-></span><span class="n" style="color: #333;">h</span><span class="p">()</span><span class="o" style="font-weight: 600;">/</span><span class="mi" style="color: #099;">2</span><span class="p">);</span></span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -44,7 +44,7 @@ Molecular Biology and Evolution 27(2):221-224.</td>
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<pre style="margin: 0;"> <span id="LC44" class="line" lang="html">SEAVIEW and PHYLO_WIN: two graphic tools for sequence alignment and molecular phylogeny.<span class="nt" style="color: navy;"></a></span> </span>
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<pre style="margin: 0;"> <span id="LC45" class="line" lang="html">Comput. Appl. Biosci., 12:543-548.</span>
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<pre style="margin: 0;"> <span id="LC46" class="line" lang="html"><span class="nt" style="color: navy;"><p></span></span>
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<pre style="margin: 0;">-<span id="LC47" class="line" lang="html">Version 4.6.<span class="idiff left right">4</span></span>
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<pre style="margin: 0;">+<span id="LC47" class="line" lang="html">Version 4.6.<span class="idiff left right">5</span></span>
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<pre style="margin: 0;"> <span id="LC48" class="line" lang="html"></span>
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<pre style="margin: 0;"> <span id="LC49" class="line" lang="html"><span class="nt" style="color: navy;"><p></span>Binaries and full source code available from <span class="nt" style="color: navy;"><a</span> <span class="na" style="color: teal;">href=</span><span class="s" style="color: #d14;">http://doua.prabi.fr/software/seaview</span><span class="nt" style="color: navy;">></span>http://doua.prabi.fr/software/seaview<span class="nt" style="color: navy;"></a></span></span>
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<pre style="margin: 0;"> <span id="LC50" class="line" lang="html"></span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -844,6 +844,10 @@ or <tt>nexus</tt>). The format of the input file is the default.</td></tr></td>
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<pre style="margin: 0;"> <span id="LC844" class="line" lang="html"><span class="nt" style="color: navy;"><tr><td><tt></span>-by_rank<span class="nt" style="color: navy;"></tt></td><td></span>identify sequences by their rank in alignments, <span class="nt" style="color: navy;"><i></span>i.e.<span class="nt" style="color: navy;"></i></span>, the 1st seq. of <span class="nt" style="color: navy;"><i></span>align1<span class="nt" style="color: navy;"></i></span> will be added</span>
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<pre style="margin: 0;"> <span id="LC845" class="line" lang="html">at the end of the 1st seq of the input file, the 2nd with the 2nd, and so on. </span>
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<pre style="margin: 0;"> <span id="LC846" class="line" lang="html">Without this option, sequences with the same name in alignment files are concatenated.<span class="nt" style="color: navy;"></td></tr></span></span>
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<pre style="margin: 0;">+<span id="LC847" class="line" lang="html"></span>
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<pre style="margin: 0;">+<span id="LC848" class="line" lang="html"><span class="nt" style="color: navy;"><tr><td><tt></span>-record_partition<span class="nt" style="color: navy;"></tt></td><td></span> record as 'site sets' the locations of the concatenated pieces in the final concatenate<span class="nt" style="color: navy;"></td></tr></span></span>
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<pre style="margin: 0;">+<span id="LC849" class="line" lang="html"></span>
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<pre style="margin: 0;"> <span id="LC851" class="line" lang="html"><span class="nt" style="color: navy;"><tr><td><tt></span>-output_format<span class="nt" style="color: navy;"></tt></span> <span class="nt" style="color: navy;"><i></span>fmt<span class="nt" style="color: navy;"></i></td><td></span>format of the concatenated alignment file </span>
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<pre style="margin: 0;"> <span id="LC852" class="line" lang="html">(<span class="nt" style="color: navy;"><tt></span>mase, phylip, clustal, msf, fasta<span class="nt" style="color: navy;"></tt></span>, or <span class="nt" style="color: navy;"><tt></span>nexus<span class="nt" style="color: navy;"></tt></span>). Default is the format of the input alignment.<span class="nt" style="color: navy;"></td></tr></span></span>
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<pre style="margin: 0;"> <span id="LC853" class="line" lang="html"><span class="nt" style="color: navy;"><tr><td><tt></span>-o<span class="nt" style="color: navy;"></tt></span> <span class="nt" style="color: navy;"><i></span>fname<span class="nt" style="color: navy;"></i></td><td></span> use <span class="nt" style="color: navy;"><i></span>fname<span class="nt" style="color: navy;"></i></span> as name of the concatenated alignment </span>
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