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<h3>
Martin Uecker pushed to branch master
at <a href="https://salsa.debian.org/med-team/bart">Debian Med / bart</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/commit/5eb5943e68da4373e58b141b32f5037eb7692c87">5eb5943e</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2017-11-24T13:52:09+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">version
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/commit/3a4fc5a7d8d26743906babeef7ada78aeed0f4a0">3a4fc5a7</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2017-11-24T13:52:23+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">fix typo
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/commit/68091c24b0b87e90d609b811983ce978c4a25be2">68091c24</a></strong>
<div>
<span>by Christian Holme</span>
<i>at 2017-11-28T21:12:37+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">nlinv: add option for debug level
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/commit/7353ba369cab656c4d95dd0cfefa3bbd5010dcf4">7353ba36</a></strong>
<div>
<span>by Christian Holme</span>
<i>at 2017-11-28T21:12:37+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">nlinv: describe options
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/commit/eed78e1e3a60ea49ed0fce01e12f4c402e095afe">eed78e1e</a></strong>
<div>
<span>by Christian Holme</span>
<i>at 2017-11-28T21:12:37+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">nlinv: make IRGNM reduction factor configurable
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/commit/b95fe32cecb8e609c01c11be1b977226b616d4fe">b95fe32c</a></strong>
<div>
<span>by Christian Holme</span>
<i>at 2017-11-28T21:12:37+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">nlinv: consistent name for image
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/commit/b4cf93438605813ca19b7229f071dcf7832cde1a">b4cf9343</a></strong>
<div>
<span>by Christian Holme</span>
<i>at 2017-11-28T21:12:37+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">noir/recon.c: rename img to x
since img in that case was actually the image and the coils together.
It now reflects standard usage: x is the variable optimized by the
IRGNM.
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/commit/f727271e03b1a6d2431fdcf0d0fa60016f862fcb">f727271e</a></strong>
<div>
<span>by Christian Holme</span>
<i>at 2017-11-28T21:12:37+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">noir/recon: names consistent to header
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/commit/928ff3a5795c965b83a09211db1f0d6f6289d66d">928ff3a5</a></strong>
<div>
<span>by Christian Holme</span>
<i>at 2017-11-28T21:12:37+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">nlinv: move initialization to nlinv.c
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/commit/f3b492f24cd4e122f28c3677fc57b99fcbe9d4e8">f3b492f2</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2017-11-28T21:52:19+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">newer gcc on Mac
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/commit/072890a93b0b7b24e520abda1eff83f3a2845ea1">072890a9</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2017-11-29T00:13:45+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">build fix mac
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/commit/bbf37f19202ba343b52ca2917760dfe272764627">bbf37f19</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2017-11-29T20:48:22+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">remove macro for type-safe use of const arrays as function arguments on old compilers
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/commit/3ffa91f43c49c7ab124d3293c5e14b819cd77b25">3ffa91f4</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2017-12-03T13:01:28+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">remove build test for homebrew
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/commit/f69f2b6ec801ee1706db17e3b278a60d96338159">f69f2b6e</a></strong>
<div>
<span>by Jon Tamir</span>
<i>at 2017-12-03T13:08:36-08:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">ecalib: add option to turn off phase rotation
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/commit/62b103a0142b2b44ed1136e08a50e087ce62a21f">62b103a0</a></strong>
<div>
<span>by Jon Tamir</span>
<i>at 2017-12-04T09:41:14+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">homodyne: add option for uncentered ffts (#109)
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/commit/fbc2e46497d3fb1eb910e054d82b54e65bc4748d">fbc2e464</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2017-12-04T21:11:19+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">add noreturn to error function
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/commit/b015c7b8cdb2618eec412504e745a7c8844aa933">b015c7b8</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2017-12-05T09:35:26+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">minor style changes
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/commit/dad94e1bcf64a4cb026f8fb3f135a731d2bbaa99">dad94e1b</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2017-12-05T09:35:26+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">remove unneeded omp.h header
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/commit/f504015cae71245c0251f76edd5fe7f1d0a30c33">f504015c</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2017-12-05T09:35:26+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">remove redundant vecop
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/commit/bb8d5fdf476b05f26ebb79e9499ebfb9a463c566">bb8d5fdf</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2017-12-05T10:05:35+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">hide noreturn from cuda
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/commit/1281d1c5d1990a58e2644de95709e8fe120a73a3">1281d1c5</a></strong>
<div>
<span>by Christian Holme</span>
<i>at 2017-12-05T12:59:44+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">nlinv: properly initialize pointer as NULL
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/commit/fcfa3a9f737139282e15e808d0d59e37c391182e">fcfa3a9f</a></strong>
<div>
<span>by Christian Holme</span>
<i>at 2017-12-05T13:00:19+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">nlinv: add option to provide initialization
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/commit/0a806e87d2ae1a85e4f73ffc763503692fdead90">0a806e87</a></strong>
<div>
<span>by Christian Holme</span>
<i>at 2017-12-05T13:00:58+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">irgnm: improve debug output
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/commit/51cb70eeab1fef65dd249ff036fee3f18d28be91">51cb70ee</a></strong>
<div>
<span>by Christian Holme</span>
<i>at 2017-12-05T13:02:10+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">irgnm: add callback
The irgnm can now take a callback.
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/commit/a274dcf43d46480cbba68fe895d6dda0f417a9f6">a274dcf4</a></strong>
<div>
<span>by Christian Holme</span>
<i>at 2017-12-05T13:02:40+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">nlinv: add timing output
nlinv can now calculate how long the reconstruction took
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/commit/f909f976da24c146de8e3f467a201509f429bd23">f909f976</a></strong>
<div>
<span>by Christian Holme</span>
<i>at 2017-12-07T17:34:41+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">nlinv: sensitivity output also when using GPU (#111)
The code now also outputs the sensitivites calculted by nlinv when run
on the GPU. This is possible by excplicitly copying data.</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/commit/97634388da57a3e49fcaf8ffb63022a07add218c">97634388</a></strong>
<div>
<span>by Jon Tamir</span>
<i>at 2017-12-07T17:57:22-08:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">use vecop for zabs
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/commit/d50f985a5537caeec44e71b43f4cfdb2235799d6">d50f985a</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2017-12-08T10:13:07+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">fix bug for gpu-mode of cdiag operator
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/commit/495613c5749e53c595ee0305d15a59a72200ea4b">495613c5</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2017-12-10T12:12:25+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">replace free with xfree
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/commit/669800c80966e013c384069bf0dc9c8a287f97a1">669800c8</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2018-01-21T11:24:23+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">update default compiler on Mac OS X (closes #113)
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/commit/df89310619096f8fac56f89e02d145c7388f6192">df893106</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2018-01-21T11:45:21+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">change default prefix to /usr/local/
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/commit/72ca7ca1e1ce6f898d0652655a7aefa68bd1ccdb">72ca7ca1</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2018-01-21T11:46:31+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">turn off TOOLBOX_PATH overriding by default
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/commit/2a08ea1ff5b8e827331dd1fba92ecc4d627810b2">2a08ea1f</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2018-01-21T12:19:59+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">document clang issues
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/commit/2c0b132fc136beff00031ced6217d916d89c0f96">2c0b132f</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2018-01-21T18:13:44+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">uncomment build of stand alone commands for CMake
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/commit/e0e7b0297953dac37d8e4b049c182365c608c8c7">e0e7b029</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2018-01-21T18:13:44+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">CMake: turn off matlab support by default
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/commit/22c87c6a424f72b95cacb36328384234075dc803">22c87c6a</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2018-01-21T18:13:44+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">cmake: minimal c version is gnu11
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/commit/176055aab952422b4f6899eb1ed29ed7aa2a1dd9">176055aa</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2018-01-24T21:24:39+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">fix obvious bug in blockproc
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/commit/2c40b79f175a8fced9aa5ef0c1161bcf5bc47d65">2c40b79f</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2018-01-24T22:24:23+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">add missing free
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/commit/a0f01dba540c2de6d6254f405eb706c40d22c99d">a0f01dba</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2018-01-25T20:59:20+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">add script for memory-economic use of espirit
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/commit/3c1c2eb7cc3aaac92c6617d10d375ec630d9cc42">3c1c2eb7</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2018-01-29T19:59:32+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">multind: nested functions
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/commit/626cd6fec974731fa987fd82483d68d018f36b1f">626cd6fe</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2018-01-29T20:00:23+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">optimize: nested functions
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/commit/74f1339933d60f5e6aa4a9756694344ffd320962">74f13399</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2018-01-29T20:00:23+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">nested functions: merge fixes
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/commit/2dbc8471862b55659211814d33d96b9517713c77">2dbc8471</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2018-01-29T20:00:23+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">make clang compatible
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/commit/31c90b28be4b2d9ffb2380ce019398622d819ff5">31c90b28</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2018-01-29T20:00:23+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">travis
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/commit/47acbcb124e92aef2a9edaf94ff92222dd13d31b">47acbcb1</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2018-01-29T20:00:23+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">compiler check for cuda
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/commit/0c8d2b8823a5399b97e50b90159c0f7f5f856579">0c8d2b88</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2018-01-29T20:00:23+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">cuda fix
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/commit/b3e3c60249d3d8c4c2cf0beb3d726ed57e049c40">b3e3c602</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2018-01-29T20:59:14+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">add function to detect nontrivial strides
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/commit/3af86fca19e60f1ac15cde08a1f92182cef12043">3af86fca</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2018-01-29T21:03:30+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">CAST_MAYBE
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/commit/b0eff0295eb9da7df50700e753783c123f780606">b0eff029</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2018-01-29T21:03:30+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">fix run-time type check (zero-sized variables may have same address on gcc)
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/commit/a2c7270a24e79704a38c6a28d672ee3475c8118e">a2c7270a</a></strong>
<div>
<span>by Jon Tamir</span>
<i>at 2018-02-08T16:22:14+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">admm: add parameter selection by residual balancing (#114)
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/commit/3b52fa1df7fb4d973ed36a29ab14ac48f05de876">3b52fa1d</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2018-02-08T22:20:36+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">implement md_(z)smul using direct calls to vecops
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/commit/8467cc388ee79e46180f893245b783179867bdb2">8467cc38</a></strong>
<div>
<span>by Jon Tamir</span>
<i>at 2018-02-08T15:31:47-08:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">linops/fmac.c: add gpu tensor
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/commit/19948d8f9586e54fc1c25c1c79bf2480087e4efd">19948d8f</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2018-02-10T22:09:36+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">remove some use_gpu flags
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/commit/81549d389e8adbdc5c4746d8ac7e6f78f171fc4d">81549d38</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2018-02-10T22:09:36+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">remove some more use_gpu flags
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/commit/7b8fea4da6732d791b37b480f7ee147f62800869">7b8fea4d</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2018-02-10T22:09:36+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">remove unused undersampled fft operator
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/commit/0651f5945a48cdfd9661ccb83a61f225f1ac0ecb">0651f594</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2018-02-10T22:09:36+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">remove more use_gpu flags
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/commit/90339c8b13b81ef826f49e6b052a547e65747cd8">90339c8b</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2018-02-10T22:09:36+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">remove more use_gpu flags
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/commit/82f18f355193e51b796767c5de53f52a9337debf">82f18f35</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2018-02-10T22:13:57+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">minor gpu gix
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/commit/66294ca1fe07a015fc72c56f4091f35abaaa8dc7">66294ca1</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2018-02-10T23:28:29+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">add benchmark and test for md_fft
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/commit/f013618bc071da354d758ce37f48ad5c7de63e17">f013618b</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2018-02-11T12:02:20+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">add benchmarks for fft and fftmod
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/commit/cd26f403241099686f093f30bdca9a76e6e0f0be">cd26f403</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2018-02-11T16:00:32+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">error messages for impossible configurations
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/commit/c3164588e90c69c4ea19c09ba88438fd7887df6c">c3164588</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2018-02-11T17:41:37+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">missing identity operator
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/commit/c388969118da893f2cb0fe79472f0ecab3780fc1">c3889691</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2018-02-20T22:23:31+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">add nufft according to conventional definition
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/commit/50a4e7af18bcdf65809aef8d48d48a2cef9166de">50a4e7af</a></strong>
<div>
<span>by Christian Holme</span>
<i>at 2018-03-16T17:22:31+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">nlinv: option for different pattern for each coil
this is needed when usinc virtual-conjugate coils, for example
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/commit/e0a3a237bb51044af6559d5259a6c5f01e9a89b7">e0a3a237</a></strong>
<div>
<span>by Christian Holme</span>
<i>at 2018-03-16T17:22:31+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">nlinv: add ENLIVE support
This commit adds ENLIVE to the exisiting nlinv code.
ENLIVE is a method for allowing multiple sets of images and coil
sensitivity maps in the reconstruction, similar to multiple ESPIRiT
maps.
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/commit/b1f62b4a9fed8b1fd616bc13646d506ff106c1df">b1f62b4a</a></strong>
<div>
<span>by Christian Holme</span>
<i>at 2018-03-16T17:22:31+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">nlinv: remove more unused water/fat code
Commit 2d31b70bfbb9d4226950e1a3b34610eaa9f9146e removed most water/fat
code from nlinv. Relics were the sign_dims in model.c and the
CSHIFT_FLAG. This commit removes those, too.
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/commit/f967e85f275d00ff31d675c0d3dabf042317766f">f967e85f</a></strong>
<div>
<span>by Christian Holme</span>
<i>at 2018-03-16T17:22:31+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">nlinv: add (hidden) option to specify coil weighting parameters
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/commit/f4d3f32cfe14ad7fa2e1e51ca2bd8b3ec317078b">f4d3f32c</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2018-03-21T21:02:35+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">style changes
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/commit/5dc01c5c53fb7133f6353cfe1f9b7b34ef74f29c">5dc01c5c</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2018-03-21T21:24:10+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">style
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/commit/9d44eecbab7552a6e51d662930fdbd5836ef0c91">9d44eecb</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2018-04-08T17:28:40+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">update references
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/commit/0c2a6503f432cdfd88478c347ce98fe11414e940">0c2a6503</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2018-04-09T11:15:47+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">bump version
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/commit/458dee0bf4eb13688650389c9fa8509867cd8173">458dee0b</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2018-04-28T20:46:56+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Merge tag 'v0.4.03'
version 0.4.03
Changes:
- nlinv: add ENLIVE support (Christian Holme)
- nlinv: add (hidden) option to specify coil weighting parameters (Christian Holme)
- nlinv: option for different pattern for each coil (Christian Holme)
- nlinv: sensitivity output also when using GPU (Christian Holme)
- nlinv: add timing output (Christian Holme)
- nlinv: add option for debug level (Christian Holme)
- nlinv: add option to provide initialization (Christian Holme)
- nlinv: make IRGNM reduction factor configurable (Christian Holme)
- nufft: add nufft according to conventional definition
- ecalib: add option to turn off phase rotation (Jonathan Tamir)
- homodyne: add option for uncentered ffts (Jonathan Tamir)
- bench: add benchmarks for fft, fftmod, md_fft
- library: admm: add parameter selection by residual balancing (Jonathan Tamir)
- library: add function to detect nontrivial strides
- library: fix bug for gpu-mode of cdiag operator
- library: irgnm: add callback (Christian Holme)
- general: add script for memory-economic use of espirit
- build: updates and fixes for CMake
- build: build fixes on Mac OS X
- many other bug fixes and improvements
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/commit/44d465147135b2a384b90d86351401b3b3bf65d8">44d46514</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2018-04-28T20:48:04+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">remove version patch
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/commit/1f025ffecb7e96abda63638a0818d52aacf40153">1f025ffe</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2018-04-28T20:48:04+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">update copyright file
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/commit/15786d3620e91a626c83c2df9c925d11594bc77f">15786d36</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2018-04-28T20:48:04+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">fix install target
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/commit/7c58306100189fed6a4a8e2de46f441ee400772a">7c583061</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2018-04-28T20:48:04+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">update standards version
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/commit/36d855dd3b7fa8b1b0098b59818e60f421f067b3">36d855dd</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2018-04-28T20:48:10+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">secure url for copyright format
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/commit/24215223daa103a2dbff11a4b9697185f370ceb2">24215223</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2018-04-28T20:48:27+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">changelog
</pre>
</li>
</ul>
<h4>30 changed files:</h4>
<ul>
<li class="file-stats">
<a href="#dea01dd89a3b602828e630677fde5d77c06441c8">
.travis.yml
</a>
</li>
<li class="file-stats">
<a href="#9a2aa4db38d3115ed60da621e012c0efc0172aae">
CMakeLists.txt
</a>
</li>
<li class="file-stats">
<a href="#0398ccd0f49298b10a3d76a47800d2ebecd49859">
LICENSE
</a>
</li>
<li class="file-stats">
<a href="#836efb6e25a091dcb4ff8e1dbb2f0be6a5cbf14c">
Makefile
</a>
</li>
<li class="file-stats">
<a href="#69e27356ef629022720d868ab0c0e3394775b6c1">
README
</a>
</li>
<li class="file-stats">
<a href="#9c96da0e9f91d7d8937b69b524702c106258f0d1">
debian/changelog
</a>
</li>
<li class="file-stats">
<a href="#58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2">
debian/control
</a>
</li>
<li class="file-stats">
<a href="#adb7f75f79e3bb85eb62912a2904c5d24af878fb">
debian/copyright
</a>
</li>
<li class="file-stats">
<a href="#f104a3710ca38bd6f68f18511d68d7de64a51fd8">
debian/patches/0001-remove-empty-directory.patch
</a>
</li>
<li class="file-stats">
<a href="#8f05807c7797a9fe9b97f0bde3351cbbcc228139">
<span class="deleted-file">
−
debian/patches/0002-bump-version.patch
</span>
</a>
</li>
<li class="file-stats">
<a href="#bc34014ab4b9a49dd7a27bdd8d352912607c3a96">
debian/patches/series
</a>
</li>
<li class="file-stats">
<a href="#8756c63497c8dc39f7773438edf53b220c773f67">
debian/rules
</a>
</li>
<li class="file-stats">
<a href="#15233c04d1094a9aaf1bdb1aa476d8578923c4b5">
doc/references.txt
</a>
</li>
<li class="file-stats">
<a href="#3b92f7656bc2946ea2e8c45aaa841c541225e4b3">
rules/misc.mk
</a>
</li>
<li class="file-stats">
<a href="#7a226c8d823ea88b04bfd8790a7b9c2282b0c778">
rules/num.mk
</a>
</li>
<li class="file-stats">
<a href="#bd89a2bf954b1b81b4a377a3eb000bcdaa665cd2">
<span class="new-file">
+
scripts/espirit_econ.sh
</span>
</a>
</li>
<li class="file-stats">
<a href="#316299949014bc483bb2a6ab1d14243da2c954b6">
src/bart.c
</a>
</li>
<li class="file-stats">
<a href="#d0033e41f6cc22004af48753b38c180f94f6d19b">
src/bench.c
</a>
</li>
<li class="file-stats">
<a href="#cd24850e8f6e0ea00f177442feb44686d15a3a34">
src/cabs.c
</a>
</li>
<li class="file-stats">
<a href="#0ba582e6bb114228bcd07e5c4dfd345c182ba0b4">
src/calib/calib.c
</a>
</li>
<li class="file-stats">
<a href="#dad1b1c0142165979528345b28fce47222f4a8e4">
src/calib/estvar.c
</a>
</li>
<li class="file-stats">
<a href="#571335a629d4c793b5f4f7c302611bc02afd77a4">
src/dfwavelet/prox_dfwavelet.c
</a>
</li>
<li class="file-stats">
<a href="#b48c9bdddff2eb1f65390a239b6daad10e1cc86c">
src/ecalib.c
</a>
</li>
<li class="file-stats">
<a href="#01446e0ad91b1b350bd8566240533f95986006a2">
src/ecaltwo.c
</a>
</li>
<li class="file-stats">
<a href="#59ce38ec8539fda16084dcd4e4edde782b57b7a2">
src/grecon/optreg.c
</a>
</li>
<li class="file-stats">
<a href="#6ca5e20fd5340fd5bf2f0eb4dd2667e2f947abe2">
src/homodyne.c
</a>
</li>
<li class="file-stats">
<a href="#b40c1e1d9ac76e9ca073b5512c7a6adcef76eed9">
src/iter/admm.c
</a>
</li>
<li class="file-stats">
<a href="#565f96d889a372a62cc6cc9a925bad2fb7c6b142">
src/iter/admm.h
</a>
</li>
<li class="file-stats">
<a href="#d2b393ff4f23ff54031fb7e53ebd516b944c87e1">
src/iter/italgos.c
</a>
</li>
<li class="file-stats">
<a href="#a68eb3147fb4f4b996e425dbd0de0a11bbcc505c">
src/iter/italgos.h
</a>
</li>
</ul>
<h5>The diff was not included because it is too large.</h5>
</div>
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