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<h3>
Andreas Tille pushed to branch master
at <a href="https://salsa.debian.org/med-team/snpeff">Debian Med / snpeff</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/snpeff/commit/a2ad46281cdd769460a03e939285eff4d5a27dc7">a2ad4628</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2018-05-14T21:58:24+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Do not try to exclude files that are not part of the upstream source any more
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/snpeff/commit/47019c09d5c7f33ceb87bcd1bbde1f8e0298c732">47019c09</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2018-05-14T22:03:05+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">New upstream version 4.3t+dfsg</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/snpeff/commit/284523e64f04f324d779e782d73ce8f0927e5c45">284523e6</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2018-05-14T22:07:31+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Update upstream source from tag 'upstream/4.3t+dfsg'
Update to upstream version '4.3t+dfsg'
with Debian dir e01031de78241d27cbf91bb79d36565b17c9d9f1</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/snpeff/commit/c407230ba61334984f04862a6246353c8cb6ea14">c407230b</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2018-05-14T22:07:32+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">New upstream version
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/snpeff/commit/7f6317f46e5e794399804ecc48dec6f1bddf694b">7f6317f4</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2018-05-14T22:07:33+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">debhelper 11
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/snpeff/commit/1c5f1162f432d42365f11bba53f91e06f199a930">1c5f1162</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2018-05-14T22:07:56+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Point Vcs fields to salsa.debian.org
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/snpeff/commit/61053fa27260c62f5e80dde6f4ca53a472a7fcea">61053fa2</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2018-05-14T22:07:56+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Standards-Version: 4.1.4
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/snpeff/commit/082b265abaadb84189f51da36c4bb7e74984c209">082b265a</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2018-05-14T22:21:13+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Cleanup changelog since this is the first upload
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/snpeff/commit/da15a77f2d8cb36e61ae462f8d425dcd78df830c">da15a77f</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2018-05-14T22:21:55+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Fix license name
</pre>
</li>
</ul>
<h4>21 changed files:</h4>
<ul>
<li class="file-stats">
<a href="#354079a72b91a4280407c16a36f47d1986fd85a5">
.classpath
</a>
</li>
<li class="file-stats">
<a href="#a5cc2925ca8258af241be7e5b0381edf30266302">
.gitignore
</a>
</li>
<li class="file-stats">
<a href="#28e4a2e57ea1412e35cd955351520c20c1e52c43">
.settings/org.eclipse.jdt.core.prefs
</a>
</li>
<li class="file-stats">
<a href="#c84b9c324461a34a055fbda56fb26722389af79e">
<span class="new-file">
+
SnpEf - Featured by SourceForge.pdf
</span>
</a>
</li>
<li class="file-stats">
<a href="#149e048363f306a6a5163525befa366ed2d729b9">
<span class="new-file">
+
config/snpEff.ENSEMBL_86.config
</span>
</a>
</li>
<li class="file-stats">
<a href="#f27237240239562212013ab3cfccdd5f33c13091">
<span class="new-file">
+
config/snpEff.NCBI.Felis_catus.config
</span>
</a>
</li>
<li class="file-stats">
<a href="#d6684f8f6b1e93782d70a577ce9e8104505fd6ca">
<span class="new-file">
+
config/snpEff.NCBI.Takifugu_rubripes.config
</span>
</a>
</li>
<li class="file-stats">
<a href="#66e97d609dc85adbf156043a9cc3f901a6651076">
config/snpEff.core.config
</a>
</li>
<li class="file-stats">
<a href="#fcd0f37617c726fe6d62c7d0b6e3377c49bfb17b">
config/snpEff.dbs.config
</a>
</li>
<li class="file-stats">
<a href="#8f7c0fec6973527edcbebd67a0af1b9dca34b872">
<span class="deleted-file">
−
config/snpEff.etc.config
</span>
</a>
</li>
<li class="file-stats">
<a href="#bc1ffc985b11a76064e2e2ddc95dffbcf506c259">
config/snpEff.test.config
</a>
</li>
<li class="file-stats">
<a href="#44af5fda3569f71f0d2765f40af30e61ebab578a">
<span class="deleted-file">
−
config/ucsc.txt
</span>
</a>
</li>
<li class="file-stats">
<a href="#9c96da0e9f91d7d8937b69b524702c106258f0d1">
debian/changelog
</a>
</li>
<li class="file-stats">
<a href="#78fd675df1cf8c2d4c62ae1a9a912d15c8c50ba4">
debian/compat
</a>
</li>
<li class="file-stats">
<a href="#58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2">
debian/control
</a>
</li>
<li class="file-stats">
<a href="#adb7f75f79e3bb85eb62912a2904c5d24af878fb">
debian/copyright
</a>
</li>
<li class="file-stats">
<a href="#a39ddb14dc438b3e36c7ef81f9d455bc6dd6febc">
galaxy/tool-data/snpEff_genomes.loc
</a>
</li>
<li class="file-stats">
<a href="#18435e9731326cca1752f95c6eb594baa7527e67">
galaxy/tool-data/snpEff_genomes.loc.sample
</a>
</li>
<li class="file-stats">
<a href="#0b6f692625c7b5278724378867604b64d8b75735">
git/update_force
</a>
</li>
<li class="file-stats">
<a href="#e90447071630165c042a188b7493606b3e33d7fb">
<span class="deleted-file">
−
hg38_refseq/test_hg38_NM_002117.build
</span>
</a>
</li>
<li class="file-stats">
<a href="#1dd847e3b87b97e600010974f2fa9fbb26325d71">
<span class="deleted-file">
−
hg38_refseq/test_hg38_NM_002117.cds
</span>
</a>
</li>
</ul>
<h5>The diff was not included because it is too large.</h5>
</div>
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