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<h3>
Alexandre Mestiashvili pushed to branch upstream
at <a href="https://salsa.debian.org/med-team/subread">Debian Med / subread</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/subread/commit/b354f0db10e76e626be8d4b4de00eb1ab4b9cc48">b354f0db</a></strong>
<div>
<span>by Alexandre Mestiashvili</span>
<i>at 2018-05-18T18:12:20+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">New upstream version 1.6.2+dfsg</pre>
</li>
</ul>
<h4>16 changed files:</h4>
<ul>
<li class="file-stats">
<a href="#9b9715372d0cd39d21711a077b6f2ae42fb45135">
doc/SubreadUsersGuide.tex
</a>
</li>
<li class="file-stats">
<a href="#7079f81404dcaadc0154c53a419b2d1cb5f253e6">
src/HelperFunctions.c
</a>
</li>
<li class="file-stats">
<a href="#e8151656777acee64e1f016170e308d49d0a7f96">
src/HelperFunctions.h
</a>
</li>
<li class="file-stats">
<a href="#c1b8d333291fcba8482e6874c5a8cf61b565242c">
src/Makefile.Linux
</a>
</li>
<li class="file-stats">
<a href="#0f0909639769aa3e7d493b832c416371ba8f6089">
src/Makefile.MacOS
</a>
</li>
<li class="file-stats">
<a href="#03b53aa7b28dab0125f2bb23f06f341cab6c608d">
src/SNPCalling.c
</a>
</li>
<li class="file-stats">
<a href="#ade674f549387241fd4f0491301f7758451ef484">
src/build-sam-index.c
</a>
</li>
<li class="file-stats">
<a href="#de13a8a387b0f71a691e5d23cf74468d6ad7c0a0">
src/core-bigtable.c
</a>
</li>
<li class="file-stats">
<a href="#296b4814ae931def4e82a8f84e22f6c24f5b3b14">
src/core-indel.c
</a>
</li>
<li class="file-stats">
<a href="#269c5079f32c711431ad058d1e3ac63987f29255">
src/core-indel.h
</a>
</li>
<li class="file-stats">
<a href="#ecc92c74c51f8b1692fd1bd13b9657e456522c0a">
src/core-interface-aligner.c
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</li>
<li class="file-stats">
<a href="#431a9a7f741eae0019b2785bf4ae504ca6fe0271">
src/core-interface-subjunc.c
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</li>
<li class="file-stats">
<a href="#d7c9610d0bb39f36045810aea42dfc930a2d041f">
src/core-junction.c
</a>
</li>
<li class="file-stats">
<a href="#a26ea438a2b6aee04f419d17c87da7e9b997e7ae">
src/core.c
</a>
</li>
<li class="file-stats">
<a href="#3ff152fe6bda3f5dfee9715abff394de66921551">
src/core.h
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</li>
<li class="file-stats">
<a href="#08ec1eca3761439e06c59fe3179a2eb515dfacb1">
src/detection-calls.c
</a>
</li>
</ul>
<h5>The diff was not included because it is too large.</h5>
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