<!DOCTYPE html PUBLIC "-//W3C//DTD HTML 4.0 Transitional//EN" "http://www.w3.org/TR/REC-html40/loose.dtd">
<html lang="en">
<head>
<meta content="text/html; charset=utf-8" http-equiv="Content-Type">
<title>
GitLab
</title>
<style>img {
max-width: 100%; height: auto;
}
</style>
</head>
<body>
<div class="content">
<h3>
Alexandre Mestiashvili pushed to branch master
at <a href="https://salsa.debian.org/med-team/subread">Debian Med / subread</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/subread/commit/b354f0db10e76e626be8d4b4de00eb1ab4b9cc48">b354f0db</a></strong>
<div>
<span>by Alexandre Mestiashvili</span>
<i>at 2018-05-18T18:12:20+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">New upstream version 1.6.2+dfsg</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/subread/commit/ce4b712973ebe2f8c98ffadb6b25607e75cd5466">ce4b7129</a></strong>
<div>
<span>by Alexandre Mestiashvili</span>
<i>at 2018-05-18T18:13:26+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Update upstream source from tag 'upstream/1.6.2+dfsg'
Update to upstream version '1.6.2+dfsg'
with Debian dir 81b625f36906a109d1b409ff4049deab13ffb9e5</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/subread/commit/e3b11139f1a47bb241c23084a7fc5f9bf0ef837a">e3b11139</a></strong>
<div>
<span>by Alexandre Mestiashvili</span>
<i>at 2018-05-18T18:25:05+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Bump Policy to 4.1.4, install new binary flattenGTF
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/subread/commit/e94fbac908b373a061c3bb4bbd74f730733a2256">e94fbac9</a></strong>
<div>
<span>by Alexandre Mestiashvili</span>
<i>at 2018-05-18T18:41:09+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Refresh and update patches
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/subread/commit/1880567d56fcfc3dff99ab5fe15c5ac421beaef9">1880567d</a></strong>
<div>
<span>by Alexandre Mestiashvili</span>
<i>at 2018-05-18T18:52:40+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Update uploader's email in d/{control,copyright}
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/subread/commit/659254002cbadb631d40699db23c90b9d1ab78c2">65925400</a></strong>
<div>
<span>by Alexandre Mestiashvili</span>
<i>at 2018-05-18T18:56:57+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Update patch fixing typos found by lintian
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/subread/commit/99766bcde71bd88a348cf4688173026cc2fce218">99766bcd</a></strong>
<div>
<span>by Alexandre Mestiashvili</span>
<i>at 2018-05-18T18:58:29+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Bump compat to 11, remove --parallel from dh invocation in d/rules
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/subread/commit/b6cf0a2cfa057c84071ab31b2a5a27473c8643b3">b6cf0a2c</a></strong>
<div>
<span>by Alexandre Mestiashvili</span>
<i>at 2018-05-18T19:07:03+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Generate man page for flattenGTF with help2man
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/subread/commit/ac49c2927f1a8c6406d33821d3953ed8afa223a9">ac49c292</a></strong>
<div>
<span>by Alexandre Mestiashvili</span>
<i>at 2018-05-18T19:09:10+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Update changelog
Gbp-Dch: Ignore
</pre>
</li>
</ul>
<h4>23 changed files:</h4>
<ul>
<li class="file-stats">
<a href="#9c96da0e9f91d7d8937b69b524702c106258f0d1">
debian/changelog
</a>
</li>
<li class="file-stats">
<a href="#78fd675df1cf8c2d4c62ae1a9a912d15c8c50ba4">
debian/compat
</a>
</li>
<li class="file-stats">
<a href="#58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2">
debian/control
</a>
</li>
<li class="file-stats">
<a href="#adb7f75f79e3bb85eb62912a2904c5d24af878fb">
debian/copyright
</a>
</li>
<li class="file-stats">
<a href="#e5dd98c113be2752e1d0ece7dd39cb253d83216c">
debian/patches/arch_specific_flags.patch
</a>
</li>
<li class="file-stats">
<a href="#fb9e8d937d72f3a26397728040ed9ba05f3aea89">
debian/patches/fix_ftbfs_kfreebsd.patch
</a>
</li>
<li class="file-stats">
<a href="#738bfe9eb140bee362e519ae990e19d7391f9b5f">
debian/patches/typo.patch
</a>
</li>
<li class="file-stats">
<a href="#8756c63497c8dc39f7773438edf53b220c773f67">
debian/rules
</a>
</li>
<li class="file-stats">
<a href="#6d3faf73fa0c7b80be9cc3c2d1b06a1be79b0425">
debian/subread.install
</a>
</li>
<li class="file-stats">
<a href="#9b9715372d0cd39d21711a077b6f2ae42fb45135">
doc/SubreadUsersGuide.tex
</a>
</li>
<li class="file-stats">
<a href="#7079f81404dcaadc0154c53a419b2d1cb5f253e6">
src/HelperFunctions.c
</a>
</li>
<li class="file-stats">
<a href="#e8151656777acee64e1f016170e308d49d0a7f96">
src/HelperFunctions.h
</a>
</li>
<li class="file-stats">
<a href="#c1b8d333291fcba8482e6874c5a8cf61b565242c">
src/Makefile.Linux
</a>
</li>
<li class="file-stats">
<a href="#0f0909639769aa3e7d493b832c416371ba8f6089">
src/Makefile.MacOS
</a>
</li>
<li class="file-stats">
<a href="#03b53aa7b28dab0125f2bb23f06f341cab6c608d">
src/SNPCalling.c
</a>
</li>
<li class="file-stats">
<a href="#ade674f549387241fd4f0491301f7758451ef484">
src/build-sam-index.c
</a>
</li>
<li class="file-stats">
<a href="#de13a8a387b0f71a691e5d23cf74468d6ad7c0a0">
src/core-bigtable.c
</a>
</li>
<li class="file-stats">
<a href="#296b4814ae931def4e82a8f84e22f6c24f5b3b14">
src/core-indel.c
</a>
</li>
<li class="file-stats">
<a href="#269c5079f32c711431ad058d1e3ac63987f29255">
src/core-indel.h
</a>
</li>
<li class="file-stats">
<a href="#ecc92c74c51f8b1692fd1bd13b9657e456522c0a">
src/core-interface-aligner.c
</a>
</li>
<li class="file-stats">
<a href="#431a9a7f741eae0019b2785bf4ae504ca6fe0271">
src/core-interface-subjunc.c
</a>
</li>
<li class="file-stats">
<a href="#d7c9610d0bb39f36045810aea42dfc930a2d041f">
src/core-junction.c
</a>
</li>
<li class="file-stats">
<a href="#a26ea438a2b6aee04f419d17c87da7e9b997e7ae">
src/core.c
</a>
</li>
</ul>
<h5>The diff was not included because it is too large.</h5>
</div>
<div class="footer" style="margin-top: 10px;">
<p style="font-size: small; color: #777;">
—
<br>
<a href="https://salsa.debian.org/med-team/subread/compare/6cc3e31d4d989c659630cce5f634b36779251bce...ac49c2927f1a8c6406d33821d3953ed8afa223a9">View it on GitLab</a>.
<br>
You're receiving this email because of your account on salsa.debian.org.
If you'd like to receive fewer emails, you can
adjust your notification settings.
</p>
</div>
</body>
</html>