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<h3>
Andreas Tille pushed to branch upstream
at <a href="https://salsa.debian.org/med-team/iqtree">Debian Med / iqtree</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/iqtree/commit/a1731c9c08cb26039404652606e4293216f58d10">a1731c9c</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2018-05-22T17:42:55+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">New upstream version 1.6.5+dfsg</pre>
</li>
</ul>
<h4>22 changed files:</h4>
<ul>
<li class="file-stats">
<a href="#9a2aa4db38d3115ed60da621e012c0efc0172aae">
CMakeLists.txt
</a>
</li>
<li class="file-stats">
<a href="#b41319330232826b2116256a2de6d4ea1651747d">
alignment/alignment.cpp
</a>
</li>
<li class="file-stats">
<a href="#fa93ef591cf5beffef752e0d4fbc93edc9b2bd13">
alignment/alignment.h
</a>
</li>
<li class="file-stats">
<a href="#f3f25daab610dbce63a105bbfe17b70418efc9ec">
alignment/maalignment.h
</a>
</li>
<li class="file-stats">
<a href="#1d1fdc052f5fcf9ab26c74024f124949c4236777">
alignment/superalignment.cpp
</a>
</li>
<li class="file-stats">
<a href="#8fd45076787f86545871aa5bcd697b1d627277bb">
alignment/superalignment.h
</a>
</li>
<li class="file-stats">
<a href="#ada35e0e3854c8b5c333996fd417e73c8ab12038">
main/main.cpp
</a>
</li>
<li class="file-stats">
<a href="#a7ac8f866fa5767febd882507b49374354178d30">
main/phyloanalysis.cpp
</a>
</li>
<li class="file-stats">
<a href="#8cad6cbf051031e2532e58e335c0cf198539e410">
main/phyloanalysis.h
</a>
</li>
<li class="file-stats">
<a href="#182d27852fc1f61eed93e31783224a351bfaea3c">
main/phylotesting.cpp
</a>
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<li class="file-stats">
<a href="#cd3988e3383605aa1f7df3be37e4a77ea94084a6">
main/phylotesting.h
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</li>
<li class="file-stats">
<a href="#20df7e22de50f24d65ce76d69b9424b4d692ea2a">
model/modelcodon.cpp
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<li class="file-stats">
<a href="#8417c26090fb4e3f038dc2f8d21f0d2d348c7c29">
model/modeldna.cpp
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</li>
<li class="file-stats">
<a href="#b0601dbd1b512d2e23ea56b7e9ed1fcbf6d64c84">
model/modelfactory.cpp
</a>
</li>
<li class="file-stats">
<a href="#b281529a65f4acc82a039f106d2fd8f43798cb8e">
model/modelprotein.cpp
</a>
</li>
<li class="file-stats">
<a href="#af222b3577d57135d5ef16a75211491be7cf1fd4">
model/partitionmodel.cpp
</a>
</li>
<li class="file-stats">
<a href="#eeabe52528589e25f9b2f08c57e0366718a2612b">
nclextra/msetsblock.cpp
</a>
</li>
<li class="file-stats">
<a href="#e87660aa23195472e9f90c6a5bf62987138cacf8">
tree/iqtree.cpp
</a>
</li>
<li class="file-stats">
<a href="#abb26c5c42027d45662f4418a0fb7ecd879fa3f6">
tree/iqtree.h
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</li>
<li class="file-stats">
<a href="#c83411c6241c1e1547ca9353a8a223ea599e701d">
tree/mexttree.cpp
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<li class="file-stats">
<a href="#f239d8758cbcf834f3f5227bb6a482150c6d1695">
tree/mtree.cpp
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</li>
<li class="file-stats">
<a href="#04cd040d205db00d91d20b98983cf8f663433e73">
tree/phylokernelnew.h
</a>
</li>
</ul>
<h5>The diff was not included because it is too large.</h5>
</div>
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