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GitLab
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<h3>
Andreas Tille pushed to branch master
at <a href="https://salsa.debian.org/med-team/bedops">Debian Med / bedops</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/bedops/commit/d6455ca8cc89101c5f9b1e7eb35de58e2a22f7f4">d6455ca8</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2018-05-23T17:42:42+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">New upstream version 2.4.35+dfsg</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bedops/commit/c0083682ffeb27d6b74c80b666378772e55417d4">c0083682</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2018-05-23T17:42:57+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Update upstream source from tag 'upstream/2.4.35+dfsg'

Update to upstream version '2.4.35+dfsg'
with Debian dir 273d7275245ff30bc42a0aa474730e2239bfbafa</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bedops/commit/cc8509e19e345d29027517416ee15464ed9d1fb9">cc8509e1</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2018-05-23T17:42:57+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">New upstream version
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bedops/commit/a5bafb84609a0f73cda6a9fe4d18a4b5e38e70b2">a5bafb84</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2018-05-23T17:43:00+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Point Vcs fields to salsa.debian.org
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bedops/commit/a2aa1f50cd9480ecebdf17b551dc6e265d22fcb8">a2aa1f50</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2018-05-23T17:43:00+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Standards-Version: 4.1.4
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bedops/commit/337e9bc87aea072d323b7c2d00080891277c4a77">337e9bc8</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2018-05-23T17:51:10+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Upload to unstable
</pre>
</li>
</ul>
<h4>30 changed files:</h4>
<ul>
<li class="file-stats">
<a href="#836efb6e25a091dcb4ff8e1dbb2f0be6a5cbf14c">
Makefile
</a>
</li>
<li class="file-stats">
<a href="#8ec9a00bfd09b3190ac6b22251dbb1aa95a0579d">
README.md
</a>
</li>
<li class="file-stats">
<a href="#c846a0073de7cc8dcdbac602fdc31b436e1d4975">
applications/bed/conversion/src/convert2bed.c
</a>
</li>
<li class="file-stats">
<a href="#5658a671102c149d8496742e98033b881b013a05">
applications/bed/conversion/src/convert2bed.h
</a>
</li>
<li class="file-stats">
<a href="#5d557c3ca00521c284241a5b0e91b1dee543cbd2">
applications/bed/sort-bed/src/update-sort-bed-migrate-candidates.py
</a>
</li>
<li class="file-stats">
<a href="#6c66ab1117013b75fde5380ff2b49c332d392191">
applications/bed/sort-bed/src/update-sort-bed-slurm.py
</a>
</li>
<li class="file-stats">
<a href="#3293b9e029cf4f59cb465113e840043efbb15077">
applications/bed/sort-bed/src/update-sort-bed-starch-slurm.py
</a>
</li>
<li class="file-stats">
<a href="#efbe0b03c92965877c6b1c90abc3141f01555972">
applications/bed/starch/src/Makefile.darwin
</a>
</li>
<li class="file-stats">
<a href="#2a7928495f486ce3bac5296c79c914865d08da35">
applications/bed/starch/src/starch-diff.py
</a>
</li>
<li class="file-stats">
<a href="#531bbbbfabb98449c3056b97bfd873459b0bb518">
applications/bed/starch/src/starchcluster_gnuParallel.tcsh
</a>
</li>
<li class="file-stats">
<a href="#682ff457bb071783115ac15c85547fe989fce849">
applications/bed/starch/src/starchcluster_sge.tcsh
</a>
</li>
<li class="file-stats">
<a href="#6c8a99ea9648ac06e766a74baf68d6f6ce31e8ae">
applications/bed/starch/src/starchcluster_slurm.tcsh
</a>
</li>
<li class="file-stats">
<a href="#62f89b81329a21626e7ad64f2c5d862e0aa0f7e3">
applications/bed/starch/src/starchstrip.c
</a>
</li>
<li class="file-stats">
<a href="#b148c1a15ce31484ed9fb49388884e4e4edcf420">
applications/other/switch-BEDOPS-binary-type
</a>
</li>
<li class="file-stats">
<a href="#9c96da0e9f91d7d8937b69b524702c106258f0d1">
debian/changelog
</a>
</li>
<li class="file-stats">
<a href="#58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2">
debian/control
</a>
</li>
<li class="file-stats">
<a href="#254a2da7a740675e537439eb88e32083b9ea4771">
docs/conf.py
</a>
</li>
<li class="file-stats">
<a href="#697607716d52695cfd24d99557c8d376a9adc4e7">
docs/content/reference/file-management/compression/starch-diff.rst
</a>
</li>
<li class="file-stats">
<a href="#5fe8bc5fbf4704aa78fa866757eb316d44892cc8">
docs/content/reference/file-management/compression/starch.rst
</a>
</li>
<li class="file-stats">
<a href="#773dca4e376c69c9f8be4276e0fbc223cabafa9d">
docs/content/reference/file-management/compression/starchcat.rst
</a>
</li>
<li class="file-stats">
<a href="#b7d63ef880af94679de5878d7e4874da01d2acb4">
docs/content/reference/file-management/compression/starchstrip.rst
</a>
</li>
<li class="file-stats">
<a href="#0d7f3b39ae1dd5e349bfb7654f0c42ad1823d92e">
docs/content/reference/file-management/compression/unstarch.rst
</a>
</li>
<li class="file-stats">
<a href="#1358dbad89d8866b31f064301fc7adbd577e35bd">
docs/content/reference/file-management/conversion/gtf2bed.rst
</a>
</li>
<li class="file-stats">
<a href="#39776d2c3c1afc2c3a8c931469c25145f116909f">
docs/content/reference/file-management/conversion/psl2bed.rst
</a>
</li>
<li class="file-stats">
<a href="#c2696fe16c68743d8eb22ee9d77d97bce212e88f">
docs/content/reference/file-management/conversion/vcf2bed.rst
</a>
</li>
<li class="file-stats">
<a href="#4722097d5f493bf42baf9b6e702525974de3a6b9">
docs/content/reference/file-management/sorting/sort-bed.rst
</a>
</li>
<li class="file-stats">
<a href="#fdde10406cb9d4693181335501a418e6c3978c34">
docs/content/reference/set-operations/bedextract.rst
</a>
</li>
<li class="file-stats">
<a href="#43d7f896579f117f20cb9d7119efada540380b51">
docs/content/reference/set-operations/bedops.rst
</a>
</li>
<li class="file-stats">
<a href="#55e56532c42fc869ae6d860bb872350baf06f12e">
docs/content/reference/set-operations/closest-features.rst
</a>
</li>
<li class="file-stats">
<a href="#400b62e7da6874420778e23dbc3dc70cbe347175">
docs/content/reference/statistics/bedmap.rst
</a>
</li>
</ul>
<h5>The diff was not included because it is too large.</h5>

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