<!DOCTYPE html PUBLIC "-//W3C//DTD HTML 4.0 Transitional//EN" "http://www.w3.org/TR/REC-html40/loose.dtd">
<html lang="en">
<head>
<meta content="text/html; charset=utf-8" http-equiv="Content-Type">
<title>
GitLab
</title>
<style>img {
max-width: 100%; height: auto;
}
</style>
</head>
<body>
<div class="content">
<h3>
Andreas Tille pushed to branch master
at <a href="https://salsa.debian.org/med-team/malt">Debian Med / malt</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/malt/commit/2feb4a3bcbd44ec4216433c9fbbe3ce7505a1b62">2feb4a3b</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2018-05-27T14:14:38+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Use git mode for watch file
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/malt/commit/97656b94709b5c77d529f5ddecb46dd860167060">97656b94</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2018-05-27T14:14:39+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">New upstream version 0.0+git20180524.5984e06</pre>
</li>
</ul>
<h4>30 changed files:</h4>
<ul>
<li class="file-stats">
<a href="#557cb9462ec8cf34a2ae73c76311ddcf81ec9888">
antbuild/build.xml
</a>
</li>
<li class="file-stats">
<a href="#9c96da0e9f91d7d8937b69b524702c106258f0d1">
debian/changelog
</a>
</li>
<li class="file-stats">
<a href="#68ef9f98c01c7eecd4c605cc26048a06f3304b79">
debian/watch
</a>
</li>
<li class="file-stats">
<a href="#109eb8bcea0d171e6aaad87e17bbee0777b1ad2d">
installer/malt.install4j
</a>
</li>
<li class="file-stats">
<a href="#e9481108cd135be622075b130cd736cc756e3fe9">
src/malt/AlignmentEngine.java
</a>
</li>
<li class="file-stats">
<a href="#5f35a45646b57cb10d0c0f8939fe754747a98d25">
src/malt/DataForInnerLoop.java
</a>
</li>
<li class="file-stats">
<a href="#b150eb75a44186a5c6a0e1f981f4e7eb0c9a6684">
src/malt/ITextProducer.java
</a>
</li>
<li class="file-stats">
<a href="#a29adc79a660738b51128c3062d97052109bf7af">
src/malt/MaltBuild.java
</a>
</li>
<li class="file-stats">
<a href="#124b0460a7ff654f9199bbac021155cc764a182c">
src/malt/MaltOptions.java
</a>
</li>
<li class="file-stats">
<a href="#250b9512f0fe1bb4adaea02e87a460e5309a9012">
src/malt/MaltRun.java
</a>
</li>
<li class="file-stats">
<a href="#ca7cddd48327fd072d577e1dbb1062f48e36a21c">
src/malt/TestIO.java
</a>
</li>
<li class="file-stats">
<a href="#0316656406991b22ad8f841fa7b38fd167961b61">
src/malt/Version.java
</a>
</li>
<li class="file-stats">
<a href="#be0899205e7d40571446a0e95dfaa7cd1ea18d43">
src/malt/align/AlignerOptions.java
</a>
</li>
<li class="file-stats">
<a href="#af88242fa2c59f1c769ffb4c2e2787715a1d87ec">
src/malt/align/BandedAligner.java
</a>
</li>
<li class="file-stats">
<a href="#c660940afc1b0727b7da67e1d3f503fc4ca91ad6">
src/malt/align/BlastStatisticsHelper.java
</a>
</li>
<li class="file-stats">
<a href="#a8003e6d6ec01f056abad47c9e57f645469b3473">
src/malt/align/DNAScoringMatrix.java
</a>
</li>
<li class="file-stats">
<a href="#f8995192fb57f7b5b775f34658e09afc0849e5ac">
src/malt/align/IScoringMatrix.java
</a>
</li>
<li class="file-stats">
<a href="#c18580f99728e86576d9d387388e9c00bcfe4293">
src/malt/align/ProteinScoringMatrix.java
</a>
</li>
<li class="file-stats">
<a href="#f0ab0252df6de4f40e842d6f42f927c0b9f30332">
src/malt/align/SimpleAligner4DNA.java
</a>
</li>
<li class="file-stats">
<a href="#6139f24bebc5f461d1dd61d365e1d52807799ef9">
<span class="deleted-file">
−
src/malt/analysis/OrganismsProfile.java
</span>
</a>
</li>
<li class="file-stats">
<a href="#603318fb44f50f3e830a2ea25b040b481b901dcf">
<span class="deleted-file">
−
src/malt/analysis/OrganismsProfileMerger.java
</span>
</a>
</li>
<li class="file-stats">
<a href="#6238fc45c36de28b579c3e14d6037a85365841a5">
<span class="deleted-file">
−
src/malt/analysis/QueryItem.java
</span>
</a>
</li>
<li class="file-stats">
<a href="#70931faaa7e81b3d0ee6f4ac2a4bdfd0cca049bb">
<span class="deleted-file">
−
src/malt/analysis/ReadMatchItem.java
</span>
</a>
</li>
<li class="file-stats">
<a href="#03b80a9c50cf54bcf129bafc125286e8fdbaa49f">
src/malt/data/BuildRow.java
</a>
</li>
<li class="file-stats">
<a href="#a119e3a1631dc3d56664c83707c0479eba272258">
src/malt/data/DNA5.java
</a>
</li>
<li class="file-stats">
<a href="#7a60d60b7681a02e2a26a112488d36bb12ff7e31">
src/malt/data/IAlphabet.java
</a>
</li>
<li class="file-stats">
<a href="#8018fdcc856bd5cf72c6087afa4942856ffcbde2">
src/malt/data/INormalizer.java
</a>
</li>
<li class="file-stats">
<a href="#ecef89d6356b91d1869ac6d57d263fb9b24f614c">
src/malt/data/ISequenceAccessor.java
</a>
</li>
<li class="file-stats">
<a href="#d8af483744dec150ef4311e307015cb82cd775d1">
src/malt/data/ProteinAlphabet.java
</a>
</li>
<li class="file-stats">
<a href="#287ee1d92970a0174fb9a422e0f5b5adf4ce2be2">
src/malt/data/QuerySequence2MatchesCache.java
</a>
</li>
</ul>
<h5>The diff was not included because it is too large.</h5>
</div>
<div class="footer" style="margin-top: 10px;">
<p style="font-size: small; color: #777;">
—
<br>
<a href="https://salsa.debian.org/med-team/malt/compare/ed47865d7d842d4994d3506a0e5b6da021b224f1...97656b94709b5c77d529f5ddecb46dd860167060">View it on GitLab</a>.
<br>
You're receiving this email because of your account on salsa.debian.org.
If you'd like to receive fewer emails, you can
adjust your notification settings.
</p>
</div>
</body>
</html>