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<h3>
Andreas Tille pushed to branch master
at <a href="https://salsa.debian.org/med-team/concavity">Debian Med / concavity</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/concavity/commit/fe654efe8fd287cf4031351867d46641572bb9f5">fe654efe</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2018-07-13T21:18:01+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Remove unneeded Testsuite: autopkgtest
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/concavity/commit/86992e70767f22bfb342f9f85850180293a04858">86992e70</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2018-07-13T21:19:15+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Fake watch file
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/concavity/commit/34094abc058832efef6cf8b7c6b970f4f9b8994c">34094abc</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2018-07-13T21:19:40+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">debhelper 11
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/concavity/commit/c16c5e782908693d9b74d96e43a2d5a6e7ee6b5f">c16c5e78</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2018-07-13T21:19:43+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Point Vcs fields to salsa.debian.org
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/concavity/commit/c91b360bdcd591c635863aadd7c686f52f4e9067">c91b360b</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2018-07-13T21:19:43+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Standards-Version: 4.1.5
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/concavity/commit/5a9a7a7014d28704acd6d3b2dea99176ec61fe51">5a9a7a70</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2018-07-13T21:25:17+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Do not warn about fake watch file
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/concavity/commit/bfec685eced82bc3c93ee7444b4bc571351dc850">bfec685e</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2018-07-13T21:29:33+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Do not parse d/changelog
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/concavity/commit/45c6fe226455e24349a940ed9c3c01e87ec4ebdc">45c6fe22</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2018-07-13T21:30:47+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Upload to unstable
</pre>
</li>
</ul>
<h4>6 changed files:</h4>
<ul>
<li class="file-stats">
<a href="#9c96da0e9f91d7d8937b69b524702c106258f0d1">
debian/changelog
</a>
</li>
<li class="file-stats">
<a href="#78fd675df1cf8c2d4c62ae1a9a912d15c8c50ba4">
debian/compat
</a>
</li>
<li class="file-stats">
<a href="#58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2">
debian/control
</a>
</li>
<li class="file-stats">
<a href="#8756c63497c8dc39f7773438edf53b220c773f67">
debian/rules
</a>
</li>
<li class="file-stats">
<a href="#85ccdeeb03055211183e48520592d9a93592b330">
<span class="new-file">
+
debian/source/lintian-overrides
</span>
</a>
</li>
<li class="file-stats">
<a href="#68ef9f98c01c7eecd4c605cc26048a06f3304b79">
debian/watch
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</li>
</ul>
<h4>Changes:</h4>
<li id="9c96da0e9f91d7d8937b69b524702c106258f0d1">
<a href="https://salsa.debian.org/med-team/concavity/compare/064702a8b677dccb087e5fb8580b57639e7c9018...45c6fe226455e24349a940ed9c3c01e87ec4ebdc#9c96da0e9f91d7d8937b69b524702c106258f0d1"><strong>debian/changelog</strong></a>
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<pre style="margin: 0;">-<span id="LC1" class="line" lang="plaintext">concavity (0.1+dfsg.1-2) <span class="idiff left right">UNRELEASED</span>; urgency=medium</span>
</pre>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="plaintext">concavity (0.1+dfsg.1-2) <span class="idiff left right">unstable</span>; urgency=medium</span>
</pre>
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<td class="line_content noteable_line" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC2" class="line" lang="plaintext"></span>
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<td class="diff-line-num new new_line" data-linenumber="3" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC3" class="line" lang="plaintext"> [ Steffen Moeller ]</span>
</pre>
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<td class="diff-line-num new_line" data-linenumber="4" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<td class="line_content noteable_line" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC4" class="line" lang="plaintext"> * debian/upstream/metadata: Added ref to OMICtools</span>
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<td class="diff-line-num old_line" data-linenumber="4" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<td class="diff-line-num new_line" data-linenumber="5" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<td class="line_content noteable_line" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC5" class="line" lang="plaintext"></span>
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<pre style="margin: 0;">-<span id="LC5" class="line" lang="plaintext"> -- Steffen Moeller <moeller@debian.org> Thu, 03 Aug 2017 16:12:37 +0200</span>
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<td class="diff-line-num new new_line" data-linenumber="6" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC6" class="line" lang="plaintext"> [ Andreas Tille ]</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="7" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC7" class="line" lang="plaintext"> * Remove unneeded Testsuite: autopkgtest</span>
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<td class="diff-line-num new new_line" data-linenumber="8" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC8" class="line" lang="plaintext"> * Fake watch file</span>
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<td class="diff-line-num new new_line" data-linenumber="9" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC9" class="line" lang="plaintext"> * debhelper 11</span>
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<pre style="margin: 0;">+<span id="LC10" class="line" lang="plaintext"> * Point Vcs fields to salsa.debian.org</span>
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<pre style="margin: 0;">+<span id="LC11" class="line" lang="plaintext"> * Standards-Version: 4.1.5</span>
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<td class="diff-line-num new new_line" data-linenumber="12" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC12" class="line" lang="plaintext"> * Do not parse d/changelog</span>
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<td class="diff-line-num new new_line" data-linenumber="13" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC13" class="line" lang="plaintext"></span>
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<pre style="margin: 0;">+<span id="LC14" class="line" lang="plaintext"> -- Andreas Tille <tille@debian.org> Fri, 13 Jul 2018 21:29:39 +0200</span>
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<pre style="margin: 0;"> <span id="LC15" class="line" lang="plaintext"></span>
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<pre style="margin: 0;"> <span id="LC16" class="line" lang="plaintext">concavity (0.1+dfsg.1-1) unstable; urgency=medium</span>
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<pre style="margin: 0;"> <span id="LC17" class="line" lang="plaintext"></span>
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<a href="https://salsa.debian.org/med-team/concavity/compare/064702a8b677dccb087e5fb8580b57639e7c9018...45c6fe226455e24349a940ed9c3c01e87ec4ebdc#78fd675df1cf8c2d4c62ae1a9a912d15c8c50ba4"><strong>debian/compat</strong></a>
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<pre style="margin: 0;">-<span id="LC1" class="line" lang="plaintext"><span class="idiff left right">9</span></span></pre>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="plaintext"><span class="idiff left right">11</span></span></pre>
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<a href="https://salsa.debian.org/med-team/concavity/compare/064702a8b677dccb087e5fb8580b57639e7c9018...45c6fe226455e24349a940ed9c3c01e87ec4ebdc#58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2"><strong>debian/control</strong></a>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -3,12 +3,11 @@ Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.</td>
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<pre style="margin: 0;"> <span id="LC3" class="line" lang="plaintext">Uploaders: Laszlo Kajan <lkajan@rostlab.org>,</span>
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<pre style="margin: 0;"> <span id="LC4" class="line" lang="plaintext"> Andreas Tille <tille@debian.org></span>
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<pre style="margin: 0;"> <span id="LC5" class="line" lang="plaintext">Section: science</span>
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<pre style="margin: 0;">-<span id="LC6" class="line" lang="plaintext">Testsuite: autopkgtest</span>
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<pre style="margin: 0;"> <span id="LC6" class="line" lang="plaintext">Priority: optional</span>
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<pre style="margin: 0;">-<span id="LC8" class="line" lang="plaintext">Build-Depends: debhelper (>= <span class="idiff left right">9</span>)</span>
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9
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<pre style="margin: 0;">-<span id="LC9" class="line" lang="plaintext">Standards-Version: <span class="idiff left right">3.9.8</span></span>
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10
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<pre style="margin: 0;">-<span id="LC10" class="line" lang="plaintext">Vcs-Browser: https://<span class="idiff left right">anonscm.debian.org/cgit/debian-med/concavity.git</span></span>
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11
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<pre style="margin: 0;">-<span id="LC11" class="line" lang="plaintext">Vcs-Git: https://<span class="idiff left right">anonscm.debian.org/git/debian-med</span>/concavity.git</span>
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<pre style="margin: 0;">+<span id="LC7" class="line" lang="plaintext">Build-Depends: debhelper (>= <span class="idiff left right">11~</span>)</span>
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<pre style="margin: 0;">+<span id="LC8" class="line" lang="plaintext">Standards-Version: <span class="idiff left right">4.1.5</span></span>
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<pre style="margin: 0;">+<span id="LC9" class="line" lang="plaintext">Vcs-Browser: https://<span class="idiff left right">salsa.debian.org/med-team/concavity</span></span>
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<pre style="margin: 0;">+<span id="LC10" class="line" lang="plaintext">Vcs-Git: https://<span class="idiff left right">salsa.debian.org/med-team</span>/concavity.git</span>
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12
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<pre style="margin: 0;"> <span id="LC11" class="line" lang="plaintext">Homepage: http://compbio.cs.princeton.edu/concavity/</span>
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13
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<pre style="margin: 0;"> <span id="LC12" class="line" lang="plaintext"></span>
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<pre style="margin: 0;"> <span id="LC13" class="line" lang="plaintext">Package: concavity</span>
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<a href="https://salsa.debian.org/med-team/concavity/compare/064702a8b677dccb087e5fb8580b57639e7c9018...45c6fe226455e24349a940ed9c3c01e87ec4ebdc#8756c63497c8dc39f7773438edf53b220c773f67"><strong>debian/rules</strong></a>
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1
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<pre style="margin: 0;"> <span id="LC1" class="line" lang="plaintext">#!/usr/bin/make -f</span>
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<pre style="margin: 0;"> <span id="LC2" class="line" lang="plaintext">#export DH_VERBOSE=1</span>
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<pre style="margin: 0;"> <span id="LC3" class="line" lang="plaintext"></span>
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<pre style="margin: 0;">+<span id="LC4" class="line" lang="plaintext">include /usr/share/dpkg/default.mk</span>
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<pre style="margin: 0;">+<span id="LC5" class="line" lang="plaintext"></span>
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4
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<pre style="margin: 0;"> <span id="LC6" class="line" lang="plaintext">export prefix:=/usr</span>
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5
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7
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<pre style="margin: 0;"> <span id="LC7" class="line" lang="plaintext">export USER_CFLAGS:="-Wno-write-strings"</span>
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6
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<pre style="margin: 0;">-<span id="LC6" class="line" lang="plaintext">export VERSION:=$(shell <span class="idiff left right">dpkg-parsechangelog --format rfc822|sed --posix -n -e 's/^Version: \([0-9.]*\).*/\1/p;</span>')</span>
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8
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<pre style="margin: 0;">+<span id="LC8" class="line" lang="plaintext">export VERSION:=$(shell <span class="idiff left right">echo $(DEB_VERSION_UPSTREAM) | sed 's/+dfsg//</span>')</span>
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7
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9
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<pre style="margin: 0;"> <span id="LC9" class="line" lang="plaintext"></span>
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8
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10
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<pre style="margin: 0;"> <span id="LC10" class="line" lang="plaintext">export DEB_BUILD_MAINT_OPTIONS = hardening=+all</span>
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9
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11
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<pre style="margin: 0;"> <span id="LC11" class="line" lang="plaintext"></span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="12" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="14" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -12,7 +14,7 @@ get-orig-source:</td>
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12
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14
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<pre style="margin: 0;"> <span id="LC14" class="line" lang="plaintext"> mk-origtargz --repack --compress xz ../concavity_distr.tar.gz</span>
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<pre style="margin: 0;"> <span id="LC15" class="line" lang="plaintext"></span>
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<pre style="margin: 0;"> <span id="LC16" class="line" lang="plaintext">%:</span>
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<pre style="margin: 0;">-<span id="LC15" class="line" lang="plaintext"> dh $@<span class="idiff left right"> --parallel</span></span>
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<pre style="margin: 0;">+<span id="LC17" class="line" lang="plaintext"> dh $@</span>
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<pre style="margin: 0;"> <span id="LC18" class="line" lang="plaintext"></span>
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<pre style="margin: 0;"> <span id="LC19" class="line" lang="plaintext">man:</span>
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<pre style="margin: 0;"> <span id="LC20" class="line" lang="plaintext"> $(MAKE) man VERSION=$(VERSION) prefix=$(prefix)</span>
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<a href="https://salsa.debian.org/med-team/concavity/compare/064702a8b677dccb087e5fb8580b57639e7c9018...45c6fe226455e24349a940ed9c3c01e87ec4ebdc#85ccdeeb03055211183e48520592d9a93592b330"><strong>debian/source/lintian-overrides</strong></a>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="plaintext"># Its a fake watch file anyway</span>
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<pre style="margin: 0;">+<span id="LC2" class="line" lang="plaintext">concavity source: debian-watch-file-should-mangle-version line 3</span></pre>
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<a href="https://salsa.debian.org/med-team/concavity/compare/064702a8b677dccb087e5fb8580b57639e7c9018...45c6fe226455e24349a940ed9c3c01e87ec4ebdc#68ef9f98c01c7eecd4c605cc26048a06f3304b79"><strong>debian/watch</strong></a>
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<pre style="margin: 0;">-<span id="LC1" class="line" lang="plaintext"># upstream does not provide versioned tarballs</span></pre>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="plaintext">version=4</span>
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2
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<pre style="margin: 0;">+<span id="LC2" class="line" lang="plaintext">opts=dversionmangle=s/.*/0.No-Release/ \</span>
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3
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<pre style="margin: 0;">+<span id="LC3" class="line" lang="plaintext"> https://people.debian.org/~eriberto/ FakeWatchNoUpstreamReleaseForThisPackage-(\d\S+)\.gz</span></pre>
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