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<h3>
Andreas Tille pushed to branch master
at <a href="https://salsa.debian.org/med-team/librcsb-core-wrapper">Debian Med / librcsb-core-wrapper</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/librcsb-core-wrapper/commit/ffd1064360bb095cfea8d48a729bf859761653c3">ffd10643</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2018-07-26T16:06:38+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Drop unneeded get-orig-source target
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/librcsb-core-wrapper/commit/cd57b5adab10c7381fabfea4d86f7191262d08cf">cd57b5ad</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2018-07-26T16:11:38+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Fix build error with gcc-8
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/librcsb-core-wrapper/commit/dec1b226b241dd027645ef30e74908a147f534c5">dec1b226</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2018-07-26T16:11:55+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">debhelper 11
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/librcsb-core-wrapper/commit/d85919dcae7fb05484fb8f7bd50a92328ff91c6c">d85919dc</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2018-07-26T16:11:58+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Point Vcs fields to salsa.debian.org
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/librcsb-core-wrapper/commit/b206b75dd3f6fc3b07b832751e805a994f61dce8">b206b75d</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2018-07-26T16:11:59+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Standards-Version: 4.1.5
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/librcsb-core-wrapper/commit/202f460d8e96be7582fa5ede4fcdc82e6f8d272c">202f460d</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2018-07-26T16:11:59+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Testsuite: autopkgtest-pkg-python
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/librcsb-core-wrapper/commit/b8cc5d3c07fae25cdd9abc6831174060915dda08">b8cc5d3c</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2018-07-26T16:18:27+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Fix gcc-8 patch
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/librcsb-core-wrapper/commit/e6ce9121a59a8f656373fe16638fef92e3f70fcb">e6ce9121</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2018-07-27T01:10:25+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Revert to debhelper 10 since the build fails otherwise for very strange reasons (see d/rules for a beginning of the hack - but that's no solution)
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/librcsb-core-wrapper/commit/1c0284fc8f48a3ec93fb4aab3d72b499754c3571">1c0284fc</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2018-07-27T01:11:53+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">No Priority: extra
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/librcsb-core-wrapper/commit/e3c4e610b3e730454e8947e5eeffa62067db6793">e3c4e610</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2018-07-27T01:43:53+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Add TODO item to changelog
</pre>
</li>
</ul>
<h4>5 changed files:</h4>
<ul>
<li class="file-stats">
<a href="#9c96da0e9f91d7d8937b69b524702c106258f0d1">
debian/changelog
</a>
</li>
<li class="file-stats">
<a href="#58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2">
debian/control
</a>
</li>
<li class="file-stats">
<a href="#34d8991cbaaf5cecf9a0dd6947c32426754e1a8e">
<span class="new-file">
+
debian/patches/gcc-8.patch
</span>
</a>
</li>
<li class="file-stats">
<a href="#bc34014ab4b9a49dd7a27bdd8d352912607c3a96">
debian/patches/series
</a>
</li>
<li class="file-stats">
<a href="#8756c63497c8dc39f7773438edf53b220c773f67">
debian/rules
</a>
</li>
</ul>
<h4>Changes:</h4>
<li id="9c96da0e9f91d7d8937b69b524702c106258f0d1">
<a href="https://salsa.debian.org/med-team/librcsb-core-wrapper/compare/f4c5b3d447a611bfcf2682e3029d963962035cf7...e3c4e610b3e730454e8947e5eeffa62067db6793#9c96da0e9f91d7d8937b69b524702c106258f0d1"><strong>debian/changelog</strong></a>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="plaintext">librcsb-core-wrapper (1.005-6) UNRELEASED; urgency=medium</span>
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<pre style="margin: 0;">+<span id="LC2" class="line" lang="plaintext"></span>
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<td class="diff-line-num new new_line" data-linenumber="3" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC3" class="line" lang="plaintext"> * Drop unneeded get-orig-source target</span>
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<td class="diff-line-num new new_line" data-linenumber="4" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC4" class="line" lang="plaintext"> * Fix build error with gcc-8</span>
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<pre style="margin: 0;">+<span id="LC5" class="line" lang="plaintext"> Closes: #897795</span>
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<pre style="margin: 0;">+<span id="LC6" class="line" lang="plaintext"></span>
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<td class="diff-line-num new new_line" data-linenumber="7" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC7" class="line" lang="plaintext"> TODO: While the gcc-8 bug is fixed the build system is somehow messed</span>
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<pre style="margin: 0;">+<span id="LC8" class="line" lang="plaintext"> up. No idea how to fix this for the moment</span>
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<pre style="margin: 0;">+<span id="LC9" class="line" lang="plaintext"></span>
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<pre style="margin: 0;">+<span id="LC10" class="line" lang="plaintext"> * Point Vcs fields to salsa.debian.org</span>
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<td class="diff-line-num new new_line" data-linenumber="11" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC11" class="line" lang="plaintext"> * Standards-Version: 4.1.5</span>
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<pre style="margin: 0;">+<span id="LC12" class="line" lang="plaintext"> * Testsuite: autopkgtest-pkg-python</span>
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<td class="diff-line-num new new_line" data-linenumber="13" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC13" class="line" lang="plaintext"> * No Priority: extra</span>
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<pre style="margin: 0;">+<span id="LC14" class="line" lang="plaintext"></span>
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<td class="diff-line-num new new_line" data-linenumber="15" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC15" class="line" lang="plaintext"> -- Andreas Tille <tille@debian.org> Fri, 27 Jul 2018 01:12:37 +0200</span>
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<td class="diff-line-num new new_line" data-linenumber="16" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC16" class="line" lang="plaintext"></span>
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<pre style="margin: 0;"> <span id="LC17" class="line" lang="plaintext">librcsb-core-wrapper (1.005-5) unstable; urgency=medium</span>
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<pre style="margin: 0;"> <span id="LC18" class="line" lang="plaintext"></span>
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<pre style="margin: 0;"> <span id="LC19" class="line" lang="plaintext"> * Enable build against libxerces-c3.2</span>
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<a href="https://salsa.debian.org/med-team/librcsb-core-wrapper/compare/f4c5b3d447a611bfcf2682e3029d963962035cf7...e3c4e610b3e730454e8947e5eeffa62067db6793#58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2"><strong>debian/control</strong></a>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -3,6 +3,7 @@ Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.</td>
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<pre style="margin: 0;"> <span id="LC3" class="line" lang="plaintext">Uploaders: Laszlo Kajan <lkajan@debian.org>,</span>
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<pre style="margin: 0;"> <span id="LC4" class="line" lang="plaintext"> Andreas Tille <tille@debian.org></span>
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<pre style="margin: 0;"> <span id="LC5" class="line" lang="plaintext">Section: libs</span>
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<pre style="margin: 0;">+<span id="LC6" class="line" lang="plaintext">Testsuite: autopkgtest-pkg-python</span>
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<pre style="margin: 0;"> <span id="LC7" class="line" lang="plaintext">Priority: optional</span>
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<td class="line_content noteable_line" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC8" class="line" lang="plaintext">Build-Depends: debhelper (>= 10),</span>
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<pre style="margin: 0;"> <span id="LC9" class="line" lang="plaintext"> doxygen,</span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -14,9 +15,9 @@ Build-Depends: debhelper (>= 10),</td>
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<pre style="margin: 0;"> <span id="LC15" class="line" lang="plaintext"> libtool-bin,</span>
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<pre style="margin: 0;"> <span id="LC16" class="line" lang="plaintext"> bison,</span>
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<pre style="margin: 0;"> <span id="LC17" class="line" lang="plaintext"> flex</span>
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<pre style="margin: 0;">-<span id="LC17" class="line" lang="plaintext">Standards-Version: 4.1.<span class="idiff left right">1</span></span>
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<pre style="margin: 0;">-<span id="LC18" class="line" lang="plaintext">Vcs-Browser: https://<span class="idiff left right">anonscm.debian.org/cgit/debian-med/librcsb-core-wrapper.git</span></span>
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<pre style="margin: 0;">-<span id="LC19" class="line" lang="plaintext">Vcs-Git: https://<span class="idiff left right">anonscm.debian.org/git/debian-med</span>/librcsb-core-wrapper.git</span>
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<pre style="margin: 0;">+<span id="LC18" class="line" lang="plaintext">Standards-Version: 4.1.<span class="idiff left right">5</span></span>
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<pre style="margin: 0;">+<span id="LC19" class="line" lang="plaintext">Vcs-Browser: https://<span class="idiff left right">salsa.debian.org/med-team/librcsb-core-wrapper</span></span>
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<pre style="margin: 0;">+<span id="LC20" class="line" lang="plaintext">Vcs-Git: https://<span class="idiff left right">salsa.debian.org/med-team</span>/librcsb-core-wrapper.git</span>
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<pre style="margin: 0;"> <span id="LC21" class="line" lang="plaintext">Homepage: http://sw-tools.rcsb.org/apps/CORE-WRAPPER/index.html</span>
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<pre style="margin: 0;"> <span id="LC22" class="line" lang="plaintext">X-Python-Version: >= 2.5</span>
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<pre style="margin: 0;"> <span id="LC23" class="line" lang="plaintext"></span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="60" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="61" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -60,7 +61,6 @@ Description: documentation for librcsb-core-wrapper0</td>
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<pre style="margin: 0;"> <span id="LC61" class="line" lang="plaintext">Package: python-corepywrap</span>
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<pre style="margin: 0;"> <span id="LC62" class="line" lang="plaintext">Architecture: any</span>
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<pre style="margin: 0;"> <span id="LC63" class="line" lang="plaintext">Section: python</span>
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<pre style="margin: 0;">-<span id="LC63" class="line" lang="plaintext">Priority: extra</span>
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<pre style="margin: 0;"> <span id="LC64" class="line" lang="plaintext">Depends: ${shlibs:Depends},</span>
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<pre style="margin: 0;"> <span id="LC65" class="line" lang="plaintext"> ${misc:Depends},</span>
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66
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66
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<pre style="margin: 0;"> <span id="LC66" class="line" lang="plaintext"> ${python:Depends},</span>
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<li id="34d8991cbaaf5cecf9a0dd6947c32426754e1a8e">
<a href="https://salsa.debian.org/med-team/librcsb-core-wrapper/compare/f4c5b3d447a611bfcf2682e3029d963962035cf7...e3c4e610b3e730454e8947e5eeffa62067db6793#34d8991cbaaf5cecf9a0dd6947c32426754e1a8e"><strong>debian/patches/gcc-8.patch</strong></a>
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1
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="diff">Description: Fix build error with gcc-8</span>
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2
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<pre style="margin: 0;">+<span id="LC2" class="line" lang="diff"> "error: catching polymorphic type 'class std::exception' by value [-Werror=catch-value=]"</span>
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3
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<pre style="margin: 0;">+<span id="LC3" class="line" lang="diff"> -> This should be a reference</span>
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4
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<pre style="margin: 0;">+<span id="LC4" class="line" lang="diff">Bug-Debian: https://bugs.debian.org/897795</span>
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5
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<pre style="margin: 0;">+<span id="LC5" class="line" lang="diff">Author: Andreas Tille <tille@debian.org></span>
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6
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<pre style="margin: 0;">+<span id="LC6" class="line" lang="diff">Last-Update: Thu, 26 Jul 2018 16:06:21 +0200</span>
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<pre style="margin: 0;">+<span id="LC7" class="line" lang="diff"></span>
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8
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<pre style="margin: 0;">+<span id="LC8" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">--- a/common/src/GenString.C</span></span>
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<pre style="margin: 0;">+<span id="LC9" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+++ b/common/src/GenString.C</span></span>
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<pre style="margin: 0;">+<span id="LC10" class="line" lang="diff"><span class="gu" style="color: #800080; font-weight: 600;">@@ -536,7 +536,7 @@ bool String::IsNumber(const string& inSt</span></span>
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<pre style="margin: 0;">+<span id="LC11" class="line" lang="diff"> </span>
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<pre style="margin: 0;">+<span id="LC12" class="line" lang="diff"> return (true);</span>
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<pre style="margin: 0;">+<span id="LC13" class="line" lang="diff"> }</span>
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<pre style="margin: 0;">+<span id="LC14" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- catch (exception)</span></span>
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<pre style="margin: 0;">+<span id="LC15" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ catch (std::exception &exception)</span></span>
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<pre style="margin: 0;">+<span id="LC16" class="line" lang="diff"> {</span>
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<pre style="margin: 0;">+<span id="LC17" class="line" lang="diff"> return (false);</span>
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<pre style="margin: 0;">+<span id="LC18" class="line" lang="diff"> }</span></pre>
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<li id="bc34014ab4b9a49dd7a27bdd8d352912607c3a96">
<a href="https://salsa.debian.org/med-team/librcsb-core-wrapper/compare/f4c5b3d447a611bfcf2682e3029d963962035cf7...e3c4e610b3e730454e8947e5eeffa62067db6793#bc34014ab4b9a49dd7a27bdd8d352912607c3a96"><strong>debian/patches/series</strong></a>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="14" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -14,3 +14,4 @@ make_test_target</td>
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<pre style="margin: 0;"> <span id="LC14" class="line" lang="plaintext">regcomp_cert_fix.patch</span>
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15
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<pre style="margin: 0;"> <span id="LC15" class="line" lang="plaintext">gcc5.patch</span>
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16
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16
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<pre style="margin: 0;"> <span id="LC16" class="line" lang="plaintext">xerces32.patch</span>
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17
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<pre style="margin: 0;">+<span id="LC17" class="line" lang="plaintext">gcc-8.patch</span></pre>
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<li id="8756c63497c8dc39f7773438edf53b220c773f67">
<a href="https://salsa.debian.org/med-team/librcsb-core-wrapper/compare/f4c5b3d447a611bfcf2682e3029d963962035cf7...e3c4e610b3e730454e8947e5eeffa62067db6793#8756c63497c8dc39f7773438edf53b220c773f67"><strong>debian/rules</strong></a>
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<td class="diff-line-num unfold js-unfold new_line" data-linenumber="17" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -17,6 +17,9 @@ override_dh_auto_build: override_dh_auto_build-nopy override_dh_auto_build-py</td>
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17
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<pre style="margin: 0;"> <span id="LC17" class="line" lang="plaintext"></span>
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18
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<pre style="margin: 0;"> <span id="LC18" class="line" lang="plaintext">override_dh_auto_build-nopy:</span>
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19
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<pre style="margin: 0;"> <span id="LC19" class="line" lang="plaintext"> dh_auto_build</span>
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<pre style="margin: 0;">+<span id="LC20" class="line" lang="plaintext"> # When using debhelper 11 something is very different in the installation.</span>
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<pre style="margin: 0;">+<span id="LC21" class="line" lang="plaintext"> # The next line tries to hack around this - but this is not the solution - thus reverting debhelper compat level</span>
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<pre style="margin: 0;">+<span id="LC22" class="line" lang="plaintext"> # cp -a common/include/* pdbml-parser/include/* cif-file/include/* tables/include/* include</span>
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<pre style="margin: 0;"> <span id="LC23" class="line" lang="plaintext"> $(MAKE) doc</span>
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<pre style="margin: 0;"> <span id="LC24" class="line" lang="plaintext"></span>
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<pre style="margin: 0;"> <span id="LC25" class="line" lang="plaintext">override_dh_auto_build-py: override_dh_auto_build-nopy</span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="40" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="43" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -40,7 +43,3 @@ override_dh_makeshlibs:</td>
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<pre style="margin: 0;"> <span id="LC43" class="line" lang="plaintext">override_dh_auto_clean:</span>
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<pre style="margin: 0;"> <span id="LC44" class="line" lang="plaintext"> dh_auto_clean</span>
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<pre style="margin: 0;"> <span id="LC45" class="line" lang="plaintext"> rm -rf wrapper/python/build</span></pre>
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<pre style="margin: 0;">-<span id="LC43" class="line" lang="plaintext"></span>
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44
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<pre style="margin: 0;">-<span id="LC44" class="line" lang="plaintext">get-orig-source:</span>
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45
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<pre style="margin: 0;">-<span id="LC45" class="line" lang="plaintext"> mkdir -p ../tarballs</span>
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46
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<pre style="margin: 0;">-<span id="LC46" class="line" lang="plaintext"> uscan --verbose --force-download --destdir=../tarballs</span></pre>
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