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<h3>
Dylan Aïssi pushed to branch master
at <a href="https://salsa.debian.org/med-team/snakemake">Debian Med / snakemake</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/snakemake/commit/6b298196cf30b1181b17884826a91977e8becb63">6b298196</a></strong>
<div>
<span>by Dylan Aïssi</span>
<i>at 2018-07-27T17:29:35Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">New upstream version 5.2.1</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/snakemake/commit/d4f9322e853f28ad6ffd06e208ef1e697b427535">d4f9322e</a></strong>
<div>
<span>by Dylan Aïssi</span>
<i>at 2018-07-27T17:29:40Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Merge tag 'upstream/5.2.1'
Upstream version 5.2.1
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/snakemake/commit/0d5260d9bdde6df183f16ceeb506071fd8920be8">0d5260d9</a></strong>
<div>
<span>by Dylan Aïssi</span>
<i>at 2018-07-27T17:32:33Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Update d/changelog: New upstream version: Fix compatibility with python 3.7 (Closes: #904350)
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/snakemake/commit/460bc6b12fbefca88544b078c7aa4c7d08c9d047">460bc6b1</a></strong>
<div>
<span>by Dylan Aïssi</span>
<i>at 2018-07-27T20:05:03Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Remove 0012-skip_test_needing_networ_connection.patch upstream applied
</pre>
</li>
</ul>
<h4>30 changed files:</h4>
<ul>
<li class="file-stats">
<a href="#fd5da61396a8376845bee5cdf71aaf3c98a888ae">
.circleci/config.yml
</a>
</li>
<li class="file-stats">
<a href="#ab09011fa121d0a2bb9fa4ca76094f2482b902b7">
CHANGELOG.md
</a>
</li>
<li class="file-stats">
<a href="#9c96da0e9f91d7d8937b69b524702c106258f0d1">
debian/changelog
</a>
</li>
<li class="file-stats">
<a href="#2deeac294ac5d9dfbbf7dcfc6fa60d6a68a7da89">
debian/patches/0001-Use-the-inbuild-sphinx.ext.napoleon.patch
</a>
</li>
<li class="file-stats">
<a href="#9a1d15e694f16dad7c25d39b40a3fbc27764a816">
debian/patches/0003-Compat-fix.patch
</a>
</li>
<li class="file-stats">
<a href="#0cd8999e60d37d01e0033f1ec12edfaa3bd76c23">
debian/patches/0003-Use-debian-s-mathjax-package.patch
</a>
</li>
<li class="file-stats">
<a href="#6cbb5336bfa272ad2629f5ab1fabba4240e2114e">
debian/patches/0008-remove_sphinx.ext.patch
</a>
</li>
<li class="file-stats">
<a href="#1548825d34f08adcfa12441745daf04242e258f2">
debian/patches/0011-fix-privacy-breach.patch
</a>
</li>
<li class="file-stats">
<a href="#67b663081defa6bdb4d1ade844a815c80f59a12c">
<span class="deleted-file">
−
debian/patches/0012-skip_test_needing_networ_connection.patch
</span>
</a>
</li>
<li class="file-stats">
<a href="#bc34014ab4b9a49dd7a27bdd8d352912607c3a96">
debian/patches/series
</a>
</li>
<li class="file-stats">
<a href="#4d96bc0560e0c9e4668ccb39b500cece62a72820">
docs/project_info/authors.rst
</a>
</li>
<li class="file-stats">
<a href="#3c7246c0b371cfd3a475428be04706178ca01f0f">
docs/project_info/faq.rst
</a>
</li>
<li class="file-stats">
<a href="#678d7e50121966ef613372bf85b3e7f144e00ef1">
docs/snakefiles/remote_files.rst
</a>
</li>
<li class="file-stats">
<a href="#dfeb7b6e739ba66056c1799c63a5a39c7698b59f">
docs/snakefiles/rules.rst
</a>
</li>
<li class="file-stats">
<a href="#8e2edce0d507e1297474f25c00cae94258db38d8">
setup.py
</a>
</li>
<li class="file-stats">
<a href="#d366205d7cd679ff6d4a61f70728e92537101763">
snakemake/__init__.py
</a>
</li>
<li class="file-stats">
<a href="#5e16cbeea010f59dbef52f8950f4873c94f39c7e">
snakemake/_version.py
</a>
</li>
<li class="file-stats">
<a href="#cc2e928f15e341aa118531053338930d0d215b9d">
snakemake/conda.py
</a>
</li>
<li class="file-stats">
<a href="#9821437dfb3fff8383b6066a2a3c7aa3f6712a32">
snakemake/dag.py
</a>
</li>
<li class="file-stats">
<a href="#f26ea241de6ff4cfc0be3675c4f2da7114bd889d">
snakemake/exceptions.py
</a>
</li>
<li class="file-stats">
<a href="#1dba76c2cca537b789f8754f5ddbed5dc36c6dee">
snakemake/executors.py
</a>
</li>
<li class="file-stats">
<a href="#e933119c7503fe1d48ce0b0d37492388705f5808">
snakemake/io.py
</a>
</li>
<li class="file-stats">
<a href="#818384818c4671b8354b6eb98ee2bab61c015a74">
snakemake/jobs.py
</a>
</li>
<li class="file-stats">
<a href="#3065d4749c6410564a20007bd7748abfda7699f6">
snakemake/report/__init__.py
</a>
</li>
<li class="file-stats">
<a href="#7b2e7c5590f914b1c99d6d779757cc4e2527cd59">
snakemake/report/report.html
</a>
</li>
<li class="file-stats">
<a href="#55752111e76e9d786fdb84c4e7fd9f6de5c67a24">
snakemake/rules.py
</a>
</li>
<li class="file-stats">
<a href="#0ac0ac393192e0b6a8ebf767dd5e206b4afbf3b2">
snakemake/scheduler.py
</a>
</li>
<li class="file-stats">
<a href="#890eb9a72c661585e32094a5a93e483c1b1a8c82">
snakemake/shell.py
</a>
</li>
<li class="file-stats">
<a href="#f00d39cf87461717d695c7d7a12876173105fc19">
snakemake/singularity.py
</a>
</li>
<li class="file-stats">
<a href="#9ca669a3173c07a202d199fb807e42d26441228e">
snakemake/utils.py
</a>
</li>
</ul>
<h5>The diff was not included because it is too large.</h5>
</div>
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