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<h3>
Andreas Tille pushed to branch master
at <a href="https://salsa.debian.org/med-team/megan-ce">Debian Med / megan-ce</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/megan-ce/commit/3a2c0787ab1e08dcfe24a289112f281ddb0ed968">3a2c0787</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2018-08-04T04:31:44Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">New upstream commit
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/megan-ce/commit/1c50f2e4b50918fd93faf79bb79bc3ca090cb3b4">1c50f2e4</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2018-08-04T04:32:06Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">New upstream version 0.0+git20180801.099e956</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/megan-ce/commit/331faa9a6284a82df5c4ef9ebfbe716e86dd77be">331faa9a</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2018-08-04T04:33:20Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Update upstream source from tag 'upstream/0.0+git20180801.099e956'
Update to upstream version '0.0+git20180801.099e956'
with Debian dir 665624699d91cd6a721940f9547984e267b18cdc</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/megan-ce/commit/5218a5fb442282cd9c4bd54f05459f61005cebba">5218a5fb</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2018-08-04T05:46:45Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">TODO: Sort out issue with libsis-hdf5-java which is not (yet) ported to hdf5 1.10
</pre>
</li>
</ul>
<h4>30 changed files:</h4>
<ul>
<li class="file-stats">
<a href="#9c96da0e9f91d7d8937b69b524702c106258f0d1">
debian/changelog
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<li class="file-stats">
<a href="#3a79e7cf36cb83c0e8986a1c98bbaa1b714962f8">
resources/files/interpro2go.info
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<li class="file-stats">
<a href="#93cfb1e4670c3cd75e2463cf251276ca9c8cc601">
resources/files/interpro2go.map
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<li class="file-stats">
<a href="#24eeea7bc6495d7212176f4dfdfcbca956daf019">
resources/files/interpro2go.tre
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<li class="file-stats">
<a href="#94cb42876c97bef42d5b66d0599aa6f83064fc1a">
resources/files/ncbi.info
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<li class="file-stats">
<a href="#889af40ccb940a72cb4b1304bd9adfe4575481ed">
resources/files/ncbi.map
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<li class="file-stats">
<a href="#d5666f64eff52bd24196604af427c01d367216cc">
resources/files/ncbi.tre
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<li class="file-stats">
<a href="#49ab06602ad7c76d79952c64ae7d0b7de04d1f96">
src/megan/algorithms/ActiveMatches.java
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<li class="file-stats">
<a href="#5dd9545bd04221aed9a1cd3e3763d76cf9f65d21">
src/megan/algorithms/AssignmentUsingIntervalUnionLCA.java
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<li class="file-stats">
<a href="#f3158fd3cda347defcf7241547d8edb192a562fe">
src/megan/algorithms/AssignmentUsingMultiGeneBestHit.java
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<li class="file-stats">
<a href="#164229155633d0b743f6d96c1d867b2e09b5688e">
src/megan/algorithms/DataProcessor.java
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<li class="file-stats">
<a href="#c91236df692482504838a684496f729827b6e728">
src/megan/classification/commandtemplates/LoadMappingFileCommand.java
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<li class="file-stats">
<a href="#63781875ff9c7a5261ef680a299cc20a0da3fe97">
src/megan/classification/data/ClassificationFullTree.java
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<li class="file-stats">
<a href="#f824651236d568ba44b29fa5c9fc2a0e869eea22">
src/megan/clusteranalysis/ClusterViewer.java
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<li class="file-stats">
<a href="#f190bf375f412ebe034a8004d3185e9fad7987df">
src/megan/clusteranalysis/GUIConfiguration.java
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<li class="file-stats">
<a href="#2f30854e4cb1f211c12bc208db2710dda1cc6a55">
src/megan/clusteranalysis/commands/EcologicalIndexBrayCurtisCommand.java
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<li class="file-stats">
<a href="#59c6b4fde1bed46dcd8f7c34d2da70ede2251722">
src/megan/clusteranalysis/commands/EcologicalIndexChiSquareCommand.java
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<li class="file-stats">
<a href="#2b2ecec34399a38522b67a4cd62520d8caa41fe1">
src/megan/clusteranalysis/commands/EcologicalIndexCommand.java
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<li class="file-stats">
<a href="#45ab2a2d36331875002deb48c8fe3120bb6dfdc0">
src/megan/clusteranalysis/commands/EcologicalIndexEuclideanCommand.java
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<li class="file-stats">
<a href="#41ab2f59a48c7d10777df9ee97176e1d6203c035">
src/megan/clusteranalysis/commands/EcologicalIndexGoodallCommand.java
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<li class="file-stats">
<a href="#d7579b4215bbb096a4abec2fa39a17cbed264e43">
src/megan/clusteranalysis/commands/EcologicalIndexHellingerCommand.java
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<li class="file-stats">
<a href="#af965010b0a69ba02338d3e72d10579e756a7446">
src/megan/clusteranalysis/commands/EcologicalIndexKulczynskiCommand.java
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<li class="file-stats">
<a href="#0405241fb7a9bcac1f7122cb52e0796b0ecc9829">
<span class="deleted-file">
−
src/megan/clusteranalysis/commands/EcologicalIndexNormalizedGoodallCommand.java
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<li class="file-stats">
<a href="#e4a08ca9ac1ca6fd393032b8522269cae6580179">
src/megan/clusteranalysis/commands/JensensShannonDivergenceCommand.java
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<li class="file-stats">
<a href="#e546a83569b930dc11ba7290e1c5a1ba2df6ae25">
src/megan/clusteranalysis/commands/PearsonsCorrelationsDistanceCommand.java
</a>
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<li class="file-stats">
<a href="#dbfd26f86c30018230f22c768f1edcdcffd74f95">
src/megan/clusteranalysis/commands/UnweightedTaxonomicUniFracCommand.java
</a>
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<li class="file-stats">
<a href="#9531c202709e9bae2c22bdae3ae3c20acb3b3899">
src/megan/clusteranalysis/commands/WeightedTaxonomicUniFracCommand.java
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<li class="file-stats">
<a href="#f2cb3647024922c4a7bf41e5ceae6e427dab52cb">
<span class="new-file">
+
src/megan/clusteranalysis/indices/BrayCurtisDissimilarity.java
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</a>
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<li class="file-stats">
<a href="#5a5b11d1d42b17fcba48b0a48e99f0d20da177eb">
<span class="deleted-file">
−
src/megan/clusteranalysis/indices/CalculateEcologicalIndices.java
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<li class="file-stats">
<a href="#ee0a5b5f2c8f394c6a0862867f370829e2d1ed9d">
<span class="new-file">
+
src/megan/clusteranalysis/indices/ChiSquareDistance.java
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<h5>The diff was not included because it is too large.</h5>
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