<!DOCTYPE html PUBLIC "-//W3C//DTD HTML 4.0 Transitional//EN" "http://www.w3.org/TR/REC-html40/loose.dtd">
<html lang="en">
<head>
<meta content="text/html; charset=utf-8" http-equiv="Content-Type">
<title>
GitLab
</title>
<style>img {
max-width: 100%; height: auto;
}
</style>
</head>
<body>
<div class="content">
<h3>
Andreas Tille pushed to branch master
at <a href="https://salsa.debian.org/med-team/cnvkit">Debian Med / cnvkit</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/cnvkit/commit/8059fff89f675485804be5b4b9495615c051b2f9">8059fff8</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2018-08-13T10:57:39Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">New upstream version 0.9.5</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/cnvkit/commit/34ebc465bf87e9faccd17f6c88f1b6aa1edddcb8">34ebc465</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2018-08-13T10:59:13Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Update upstream source from tag 'upstream/0.9.5'
Update to upstream version '0.9.5'
with Debian dir 0c2c88dc1d7f4efa894a0e7275969d3f2581509d</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/cnvkit/commit/8aee3a8898b12057d3ea815c8ca13e8159d8621e">8aee3a88</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2018-08-13T10:59:13Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">New upstream version
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/cnvkit/commit/e77640f2b76d34be92eb42bb715b089036098b0c">e77640f2</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2018-08-13T10:59:13Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">debhelper 11
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/cnvkit/commit/8d0404a46515a49a1ee8a2f427a861ae5864f510">8d0404a4</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2018-08-13T10:59:17Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Standards-Version: 4.2.0
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/cnvkit/commit/984c386f24b9a723af406b6feef6e4dfd0002a82">984c386f</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2018-08-13T11:02:19Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">refresh patches
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/cnvkit/commit/cbdb83725d409b684a549069f9a0445831220a67">cbdb8372</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2018-08-13T11:14:28Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Upload to unstable
</pre>
</li>
</ul>
<h4>30 changed files:</h4>
<ul>
<li class="file-stats">
<a href="#dea01dd89a3b602828e630677fde5d77c06441c8">
.travis.yml
</a>
</li>
<li class="file-stats">
<a href="#0398ccd0f49298b10a3d76a47800d2ebecd49859">
LICENSE
</a>
</li>
<li class="file-stats">
<a href="#561b88e19de321ca62c7590bbb350765fb110905">
README.rst
</a>
</li>
<li class="file-stats">
<a href="#42d036b285f793fa4706218270f28c4e0af74569">
cnvlib/_version.py
</a>
</li>
<li class="file-stats">
<a href="#0dd6dacf3a32d43e909fde3613a86d002941bcc6">
cnvlib/autobin.py
</a>
</li>
<li class="file-stats">
<a href="#3c97ce14774c9dcaaf77c07a55b41a9bb29613dd">
cnvlib/cnary.py
</a>
</li>
<li class="file-stats">
<a href="#37071ebf7e39e57e21ff893de63e92a9b7f6fcba">
cnvlib/commands.py
</a>
</li>
<li class="file-stats">
<a href="#e0b9b6c135ef19da5b4d4718f3f11edff2251b58">
cnvlib/export.py
</a>
</li>
<li class="file-stats">
<a href="#d5de4c64ce69f26a9edcef51de9217f0782e4cd5">
cnvlib/import_rna.py
</a>
</li>
<li class="file-stats">
<a href="#e302820aded8fa24cbe10b7982e8c81159ed4875">
cnvlib/reference.py
</a>
</li>
<li class="file-stats">
<a href="#53cf62a516f30d088c59651d6a2d958620dd5fbc">
cnvlib/rna.py
</a>
</li>
<li class="file-stats">
<a href="#2b33ccf937d24b40fb7480b3013a15978923df38">
cnvlib/segmentation/__init__.py
</a>
</li>
<li class="file-stats">
<a href="#c160ff0d2f0f8d012f4020300257a1bfd42deb00">
cnvlib/segmetrics.py
</a>
</li>
<li class="file-stats">
<a href="#8c84e9d227297e00b270e1d1259a188a27c7d95d">
cnvlib/smoothing.py
</a>
</li>
<li class="file-stats">
<a href="#ed8b67b08be8a60cb4c760756e5303a25de5c7e4">
<span class="new-file">
+
cnvlib/ztest.py
</span>
</a>
</li>
<li class="file-stats">
<a href="#9c96da0e9f91d7d8937b69b524702c106258f0d1">
debian/changelog
</a>
</li>
<li class="file-stats">
<a href="#78fd675df1cf8c2d4c62ae1a9a912d15c8c50ba4">
debian/compat
</a>
</li>
<li class="file-stats">
<a href="#58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2">
debian/control
</a>
</li>
<li class="file-stats">
<a href="#f097f36be318325af4c8da7852f9092dcb477065">
debian/patches/python3compat.patch
</a>
</li>
<li class="file-stats">
<a href="#4455ea4c28397fb0744fe9965b258e3be7c5bf78">
devtools/conda-recipe/meta.yaml
</a>
</li>
<li class="file-stats">
<a href="#1bbcd8980c541f52998ccf56da078edd2ca6a2d0">
doc/index.rst
</a>
</li>
<li class="file-stats">
<a href="#9de64de0c6a31e3d551cbbbab0b84ae8d4b2a60d">
doc/pipeline.rst
</a>
</li>
<li class="file-stats">
<a href="#8ffde13df31f212345642ccfa4755f3bd99e7e61">
docker/Dockerfile
</a>
</li>
<li class="file-stats">
<a href="#e3f7c43ef0b392c0d1361293625fd6dcb51880dc">
scripts/cnv_annotate.py
</a>
</li>
<li class="file-stats">
<a href="#9fa936d3ed63d2a4fe12751cc15f211fdcc8a505">
scripts/cnv_expression_correlate.py
</a>
</li>
<li class="file-stats">
<a href="#37bfecdf9dbf82cca9dccd1c879453be84e4baab">
scripts/cnv_ztest.py
</a>
</li>
<li class="file-stats">
<a href="#72f766b28999fd43676a90ab81386b1377cb1d02">
<span class="new-file">
+
scripts/snpfilter.sh
</span>
</a>
</li>
<li class="file-stats">
<a href="#8e2edce0d507e1297474f25c00cae94258db38d8">
setup.py
</a>
</li>
<li class="file-stats">
<a href="#c8e0ab1b5fb1e9df495f7ab12a38316201fb89ec">
skgenome/gary.py
</a>
</li>
<li class="file-stats">
<a href="#af4aa75c1234fedbcee4a101a5adfd3e5b9a9570">
skgenome/intersect.py
</a>
</li>
</ul>
<h5>The diff was not included because it is too large.</h5>
</div>
<div class="footer" style="margin-top: 10px;">
<p style="font-size: small; color: #777;">
—
<br>
<a href="https://salsa.debian.org/med-team/cnvkit/compare/079463032f42e52d77e5942a1ac91170a775dd1e...cbdb83725d409b684a549069f9a0445831220a67">View it on GitLab</a>.
<br>
You're receiving this email because of your account on salsa.debian.org.
If you'd like to receive fewer emails, you can
adjust your notification settings.
</p>
</div>
</body>
</html>