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<h3>
Andreas Tille pushed to branch master
at <a href="https://salsa.debian.org/med-team/blasr">Debian Med / blasr</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/blasr/commit/40763d22aab4d794fc1efdbae4c901e0befa0ec4">40763d22</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2018-08-21T14:09:52Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Build-Depends: libpbdata-dev
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/blasr/commit/c9a8092108eacb60fc9ead126dc1474ee8652bb4">c9a80921</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2018-08-21T14:23:01Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">point to Github since upstream is now tagging releases
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/blasr/commit/a7a0425a6dd9600d67f16e7c15b403030b7f33a6">a7a0425a</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2018-08-21T14:23:12Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">New upstream version 5.3.2</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/blasr/commit/04be1e8619adc6f0360e17fc995977c13c0f4ba0">04be1e86</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2018-08-21T14:23:23Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Update upstream source from tag 'upstream/5.3.2'
Update to upstream version '5.3.2'
with Debian dir 6bc94a04f305f3f383fc6bae4860b986cb05f19e</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/blasr/commit/8c5563fbf2e30f700ec72cfa9e979863cc5a4cd4">8c5563fb</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2018-08-21T14:35:46Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">New upstream version, deactivate patches for the moment
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/blasr/commit/26c471c44c35c5e6aec79147ffb74792bac8973e">26c471c4</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2018-08-21T14:37:31Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Point Vcs fields to salsa.debian.org
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/blasr/commit/6239c47f93939a1e68872851f9943d44e15810cf">6239c47f</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2018-08-21T14:37:31Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Standards-Version: 4.2.0
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/blasr/commit/fece47d93a84f233b94b7bc65f022ffb62b0fe85">fece47d9</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2018-08-21T14:53:27Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Build system switched from cmake to meson
</pre>
</li>
</ul>
<h4>30 changed files:</h4>
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<li class="file-stats">
<a href="#01a718df87a96135eb956401504e555421dc5a3d">
<span class="new-file">
+
.clang-format
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<li class="file-stats">
<a href="#a5cc2925ca8258af241be7e5b0381edf30266302">
.gitignore
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<a href="#7445606fbf8f3683cd42bdc54b05d7a0bc2dfc44">
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.gitmodules
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<li class="file-stats">
<a href="#3261916a932aec8d2cae478e6aac183e1e87ea1c">
Blasr.cpp
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<li class="file-stats">
<a href="#b52dd11e4cbe75ce291553d83e51b518a0150a0c">
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BlasrGitHash.h.in
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<a href="#21563aec0d96a404700f516b7d5f85fd4682d2ca">
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BlasrVersion.h.in
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LICENSES.txt
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<a href="#8ec9a00bfd09b3190ac6b22251dbb1aa95a0579d">
README.md
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<a href="#8ab4e94f59343a8b2d003b0b47d21fff1724bfd9">
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bamboo_build.sh
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<a href="#7c9ab45d4b92978bb7e960e687f86ad746eb4507">
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blasr.java
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<a href="#8d9366bd88df2f74d12bfee71e917c42e0691bcc">
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configure.py
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<a href="#6ac40fae22068318df8c943fe16ad2a7d0b241f6">
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cram.mk
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<li class="file-stats">
<a href="#5df2d0853d4c6b32ef546eabebd9d2bab516b0aa">
ctest/affineAlign.t
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<li class="file-stats">
<a href="#76945d857b7539128915971f9a9eb87e78093e8f">
ctest/aggressiveIntervalCut.t
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<li class="file-stats">
<a href="#60c71cd07f4ed516182fe6e6cf485033313ac686">
ctest/alignScore.t
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<li class="file-stats">
<a href="#e95c8723acefe24b3c827ac63f568bbaa84fbd6e">
ctest/bamConcordant.t
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<li class="file-stats">
<a href="#c8ededc6f02ba16c6259629063b0fb7f5469f493">
ctest/bamIn.t
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<a href="#7026022012bb5d5b8ef15507d91c0ba4f6496660">
ctest/bamOut.t
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<li class="file-stats">
<a href="#a3031861fc2635b4f7e0de14ba41b1fa337e34d5">
ctest/bug25328.t
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<li class="file-stats">
<a href="#cf0f2d1a420cbea796406a954e95941c719dabbb">
ctest/bug25766.t
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<li class="file-stats">
<a href="#48f3078f816d0c9a2118018f56cac45fb0a91fb6">
ctest/ccsH5.t
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<li class="file-stats">
<a href="#06fd8d4089bb5b887a0840c2464ee14f55e810a8">
ctest/cigarAdjecentIndels.t
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<li class="file-stats">
<a href="#114fbe2621a7c3fff8ece2660146443ec25edf73">
ctest/concordant.t
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<li class="file-stats">
<a href="#58c5b44ff795778a39b33e3ab8148765f811c10a">
ctest/dataset.t
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<li class="file-stats">
<a href="#eca7369245739381c56243d424f80c1ac1b038ff">
ctest/deterministic.t
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<li class="file-stats">
<a href="#29a9b2356fc2b6abe6c7f29beef1781818296121">
ctest/ecoli.t
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<li class="file-stats">
<a href="#e82b3a09069bac75f9a61df5574d6466fe5a8005">
ctest/fastMaxInterval.t
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<li class="file-stats">
<a href="#d13b722f8bc37fb24060d2e306602f51a8092ce0">
ctest/filtercriteria.t
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<li class="file-stats">
<a href="#eb14a7bd61e6c687474603ec3141a4ba32e75d7a">
ctest/fofn.t
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</ul>
<h5>The diff was not included because it is too large.</h5>
</div>
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