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<h3>
Julien Y. Dutheil pushed to branch upstream
at <a href="https://salsa.debian.org/med-team/libbpp-phyl-omics">Debian Med / libbpp-phyl-omics</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/libbpp-phyl-omics/commit/60ca9b857812460e670cbaa37a9d8607c4d112b5">60ca9b85</a></strong>
<div>
<span>by Julien Y. Dutheil</span>
<i>at 2018-08-20T07:06:32Z</i>
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<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">New upstream version 2.4.1</pre>
</li>
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<h4>3 changed files:</h4>
<ul>
<li class="file-stats">
<a href="#9a2aa4db38d3115ed60da621e012c0efc0172aae">
CMakeLists.txt
</a>
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<li class="file-stats">
<a href="#3fa7b3d8e9b1a6a923cff77497ab817d9f94b6c0">
Doxyfile
</a>
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<li class="file-stats">
<a href="#fb963441408416b5ff9ac576ab7e6d6d325a528c">
bpp-phyl-omics.spec
</a>
</li>
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<h4>Changes:</h4>
<li id="9a2aa4db38d3115ed60da621e012c0efc0172aae">
<a href="https://salsa.debian.org/med-team/libbpp-phyl-omics/commit/60ca9b857812460e670cbaa37a9d8607c4d112b5#9a2aa4db38d3115ed60da621e012c0efc0172aae"><strong>CMakeLists.txt</strong></a>
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<td class="diff-line-num unfold js-unfold new_line" data-linenumber="96" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -96,10 +96,10 @@ ENDIF(NO_DEP_CHECK)</td>
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<td class="line_content noteable_line" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC96" class="line" lang="cmake"><span class="c1" style="color: #998; font-style: italic;"># Packager</span></span>
</pre>
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<td class="line_content noteable_line" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC97" class="line" lang="cmake"><span class="nf" style="color: #900; font-weight: 600;">SET</span><span class="p">(</span>CPACK_PACKAGE_NAME <span class="s2" style="color: #d14;">"libbpp-phyl-omics"</span><span class="p">)</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="98" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<td class="diff-line-num new_line" data-linenumber="98" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC98" class="line" lang="cmake"><span class="nf" style="color: #900; font-weight: 600;">SET</span><span class="p">(</span>CPACK_PACKAGE_VENDOR <span class="s2" style="color: #d14;">"Bio++ Development Team"</span><span class="p">)</span></span>
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99
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<pre style="margin: 0;">-<span id="LC99" class="line" lang="cmake"><span class="nf" style="color: #900; font-weight: 600;">SET</span><span class="p">(</span>CPACK_PACKAGE_VERSION <span class="s2" style="color: #d14;">"2.4.<span class="idiff left right">0</span>"</span><span class="p">)</span></span>
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99
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<pre style="margin: 0;">+<span id="LC99" class="line" lang="cmake"><span class="nf" style="color: #900; font-weight: 600;">SET</span><span class="p">(</span>CPACK_PACKAGE_VERSION <span class="s2" style="color: #d14;">"2.4.<span class="idiff left right">1</span>"</span><span class="p">)</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="100" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
100
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<td class="diff-line-num new_line" data-linenumber="100" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC100" class="line" lang="cmake"><span class="nf" style="color: #900; font-weight: 600;">SET</span><span class="p">(</span>CPACK_PACKAGE_VERSION_MAJOR <span class="s2" style="color: #d14;">"2"</span><span class="p">)</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="101" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC101" class="line" lang="cmake"><span class="nf" style="color: #900; font-weight: 600;">SET</span><span class="p">(</span>CPACK_PACKAGE_VERSION_MINOR <span class="s2" style="color: #d14;">"4"</span><span class="p">)</span></span>
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<pre style="margin: 0;">-<span id="LC102" class="line" lang="cmake"><span class="nf" style="color: #900; font-weight: 600;">SET</span><span class="p">(</span>CPACK_PACKAGE_VERSION_PATCH <span class="s2" style="color: #d14;">"<span class="idiff left right">0</span>"</span><span class="p">)</span></span>
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<td class="diff-line-num new old_line" data-linenumber="103" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="102" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
102
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<pre style="margin: 0;">+<span id="LC102" class="line" lang="cmake"><span class="nf" style="color: #900; font-weight: 600;">SET</span><span class="p">(</span>CPACK_PACKAGE_VERSION_PATCH <span class="s2" style="color: #d14;">"<span class="idiff left right">1</span>"</span><span class="p">)</span></span>
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103
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<td class="diff-line-num new_line" data-linenumber="103" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC103" class="line" lang="cmake"><span class="nf" style="color: #900; font-weight: 600;">SET</span><span class="p">(</span>CPACK_PACKAGE_DESCRIPTION_SUMMARY <span class="s2" style="color: #d14;">"The Bio++ Phylogen-Omics library"</span><span class="p">)</span></span>
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<td class="diff-line-num old_line" data-linenumber="104" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC104" class="line" lang="cmake"><span class="nf" style="color: #900; font-weight: 600;">SET</span><span class="p">(</span>CPACK_RESOURCE_FILE_LICENSE <span class="s2" style="color: #d14;">"</span><span class="si" style="color: #d14;">${</span><span class="nv" style="color: teal;">CMAKE_SOURCE_DIR</span><span class="si" style="color: #d14;">}</span><span class="s2" style="color: #d14;">/COPYING.txt"</span><span class="p">)</span></span>
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<pre style="margin: 0;"> <span id="LC105" class="line" lang="cmake"><span class="nf" style="color: #900; font-weight: 600;">SET</span><span class="p">(</span>CPACK_RESOURCE_FILE_AUTHORS <span class="s2" style="color: #d14;">"</span><span class="si" style="color: #d14;">${</span><span class="nv" style="color: teal;">CMAKE_SOURCE_DIR</span><span class="si" style="color: #d14;">}</span><span class="s2" style="color: #d14;">/AUTHORS.txt"</span><span class="p">)</span></span>
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<li id="3fa7b3d8e9b1a6a923cff77497ab817d9f94b6c0">
<a href="https://salsa.debian.org/med-team/libbpp-phyl-omics/commit/60ca9b857812460e670cbaa37a9d8607c4d112b5#3fa7b3d8e9b1a6a923cff77497ab817d9f94b6c0"><strong>Doxyfile</strong></a>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -38,7 +38,7 @@ PROJECT_NAME = bpp-phyl-omics</td>
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<pre style="margin: 0;"> <span id="LC38" class="line" lang="plaintext"># could be handy for archiving the generated documentation or if some version</span>
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<pre style="margin: 0;"> <span id="LC39" class="line" lang="plaintext"># control system is used.</span>
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<pre style="margin: 0;"> <span id="LC40" class="line" lang="plaintext"></span>
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<pre style="margin: 0;">-<span id="LC41" class="line" lang="plaintext">PROJECT_NUMBER = 2.4.<span class="idiff left right">0</span></span>
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<pre style="margin: 0;">+<span id="LC41" class="line" lang="plaintext">PROJECT_NUMBER = 2.4.<span class="idiff left right">1</span></span>
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<pre style="margin: 0;"> <span id="LC42" class="line" lang="plaintext"></span>
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<pre style="margin: 0;"> <span id="LC43" class="line" lang="plaintext"># Using the PROJECT_BRIEF tag one can provide an optional one line description</span>
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<pre style="margin: 0;"> <span id="LC44" class="line" lang="plaintext"># for a project that appears at the top of each page and should give viewer a</span>
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<li id="fb963441408416b5ff9ac576ab7e6d6d325a528c">
<a href="https://salsa.debian.org/med-team/libbpp-phyl-omics/commit/60ca9b857812460e670cbaa37a9d8607c4d112b5#fb963441408416b5ff9ac576ab7e6d6d325a528c"><strong>bpp-phyl-omics.spec</strong></a>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -3,7 +3,7 @@</td>
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<pre style="margin: 0;"> <span id="LC3" class="line" lang="plaintext">URL: https://github.com/BioPP/bpp-phyl-omics</span>
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<pre style="margin: 0;"> <span id="LC4" class="line" lang="plaintext"></span>
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<pre style="margin: 0;"> <span id="LC5" class="line" lang="plaintext">Name: bpp-phyl-omics</span>
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<pre style="margin: 0;">-<span id="LC6" class="line" lang="plaintext">Version: 2.4.<span class="idiff left right">0</span></span>
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<pre style="margin: 0;">+<span id="LC6" class="line" lang="plaintext">Version: 2.4.<span class="idiff left right">1</span></span>
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<pre style="margin: 0;"> <span id="LC7" class="line" lang="plaintext">Release: 1%{?dist}</span>
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<pre style="margin: 0;"> <span id="LC8" class="line" lang="plaintext">License: CECILL-2.0</span>
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<pre style="margin: 0;"> <span id="LC9" class="line" lang="plaintext">Vendor: The Bio++ Project</span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="94" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -94,6 +94,8 @@ rm -rf $RPM_BUILD_ROOT</td>
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<pre style="margin: 0;"> <span id="LC94" class="line" lang="plaintext">%{_prefix}/include/*</span>
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<pre style="margin: 0;"> <span id="LC95" class="line" lang="plaintext"></span>
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<pre style="margin: 0;"> <span id="LC96" class="line" lang="plaintext">%changelog</span>
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<pre style="margin: 0;">+<span id="LC97" class="line" lang="plaintext">* Wed Aug 13 2018 Julien Dutheil <julien.dutheil@univ-montp2.fr> 2.4.1-1</span>
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<pre style="margin: 0;">+<span id="LC98" class="line" lang="plaintext">- Compatibility update gcc8</span>
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<pre style="margin: 0;"> <span id="LC99" class="line" lang="plaintext">* Mon Mar 12 2018 Julien Dutheil <julien.dutheil@univ-montp2.fr> 2.4.0-1</span>
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<pre style="margin: 0;"> <span id="LC100" class="line" lang="plaintext">- Increased interface number</span>
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<pre style="margin: 0;"> <span id="LC101" class="line" lang="plaintext">- Removed dynamic exceptions specifications.</span>
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