<!DOCTYPE html PUBLIC "-//W3C//DTD HTML 4.0 Transitional//EN" "http://www.w3.org/TR/REC-html40/loose.dtd">
<html lang="en">
<head>
<meta content="text/html; charset=utf-8" http-equiv="Content-Type">
<title>
GitLab
</title>



<style>img {
max-width: 100%; height: auto;
}
</style>
</head>
<body>
<div class="content">
<h3>
Andreas Tille pushed to branch upstream
at <a href="https://salsa.debian.org/med-team/python-cobra">Debian Med / python-cobra</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/python-cobra/commit/30413e7b4c6ba8f661a0acf0e95840183f4771d9">30413e7b</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2018-08-25T05:35:45Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">New upstream version 0.13.3</pre>
</li>
</ul>
<h4>30 changed files:</h4>
<ul>
<li class="file-stats">
<a href="#e92266778ac0ab35c5df350376a55fe504bb38b8">
.github/ISSUE_TEMPLATE.md
</a>
</li>
<li class="file-stats">
<a href="#dea01dd89a3b602828e630677fde5d77c06441c8">
.travis.yml
</a>
</li>
<li class="file-stats">
<a href="#43b9d80d1f50472e56afb94a061257af5b53182b">
appveyor.yml
</a>
</li>
<li class="file-stats">
<a href="#f71055fa524cf8a00d0959a30647e283b320e323">
<span class="new-file">
+
benchmarks/geometric_fba.ipynb
</span>
</a>
</li>
<li class="file-stats">
<a href="#7d2ef473dba1faa1f51945f05a230a986e9aa54e">
<span class="new-file">
+
benchmarks/objective_benchmark.ipynb
</span>
</a>
</li>
<li class="file-stats">
<a href="#fb38d7e642082c938f95509b90589de9e9fe4a6f">
<span class="new-file">
+
benchmarks/single_gene_deletion_linear_room.ipynb
</span>
</a>
</li>
<li class="file-stats">
<a href="#39480e21cc97c057ae3f08c37263ebadeee56fc1">
<span class="new-file">
+
benchmarks/single_gene_deletion_room.ipynb
</span>
</a>
</li>
<li class="file-stats">
<a href="#2562dc47c12586d518db2b6ce12e991436fe5c6a">
cobra/__init__.py
</a>
</li>
<li class="file-stats">
<a href="#c48fb78dcfd1931e2677bc6f4bed81a8f7dcecff">
cobra/core/metabolite.py
</a>
</li>
<li class="file-stats">
<a href="#e8fd861d0209ad51e3cdc6d870716c2a084e24e7">
cobra/core/model.py
</a>
</li>
<li class="file-stats">
<a href="#396f9e7d5900dabaf3341075150dd8317a4462d2">
cobra/core/reaction.py
</a>
</li>
<li class="file-stats">
<a href="#6ea80dfe93ecc1a172dba9350021130855579248">
cobra/flux_analysis/__init__.py
</a>
</li>
<li class="file-stats">
<a href="#203fd519abdc1fe5291ee29c99d76bc3b04f14b6">
cobra/flux_analysis/deletion.py
</a>
</li>
<li class="file-stats">
<a href="#77bb2670bb14137fcb7f7a9823f668772d2b25e3">
cobra/flux_analysis/gapfilling.py
</a>
</li>
<li class="file-stats">
<a href="#ee85aa8ca1c5adc45b51cabf1346952921488346">
<span class="new-file">
+
cobra/flux_analysis/geometric.py
</span>
</a>
</li>
<li class="file-stats">
<a href="#ec904ddccaa7dc499773bf5f80d6cc861f376f83">
cobra/flux_analysis/loopless.py
</a>
</li>
<li class="file-stats">
<a href="#d1973dff088840ba4bccfb6991c48594c8dac9f3">
cobra/flux_analysis/moma.py
</a>
</li>
<li class="file-stats">
<a href="#12b9cab85d835d94cdebaf01b0623bad7521896a">
cobra/flux_analysis/parsimonious.py
</a>
</li>
<li class="file-stats">
<a href="#8d1ab86e0a8013a323619fd245f5eef1f5c80b79">
<span class="new-file">
+
cobra/flux_analysis/room.py
</span>
</a>
</li>
<li class="file-stats">
<a href="#b034f24d64b89b2deffa5ee8ed0d6ab8480d9fe5">
cobra/flux_analysis/summary.py
</a>
</li>
<li class="file-stats">
<a href="#2422a3f616785578d9137523304cc7feb85846d7">
cobra/flux_analysis/variability.py
</a>
</li>
<li class="file-stats">
<a href="#5dd0128ac5dd2b05853557ea20b6663b96cec0d2">
<span class="new-file">
+
cobra/medium/__init__.py
</span>
</a>
</li>
<li class="file-stats">
<a href="#14551ef2823a3e3aa0cf8218016bea288d646272">
<span class="new-file">
+
cobra/medium/boundary_types.py
</span>
</a>
</li>
<li class="file-stats">
<a href="#66e49b3f2e4b6ce59c1cbfe9f1a04c814c759417">
<span class="new-file">
+
cobra/medium/minimal_medium.py
</span>
</a>
</li>
<li class="file-stats">
<a href="#9b08e643672cd98fc512f477fe50a8de4f211526">
cobra/test/conftest.py
</a>
</li>
<li class="file-stats">
<a href="#8c8be9f5bd5b01368eaf5c1d028ee66ec71057ca">
cobra/test/test_flux_analysis.py
</a>
</li>
<li class="file-stats">
<a href="#e5d99961d3d3b3b7a97f4b0846296622f5349aff">
<span class="new-file">
+
cobra/test/test_medium.py
</span>
</a>
</li>
<li class="file-stats">
<a href="#0dfa384b7d0238191713412484c9fed0a5fdcdd1">
cobra/test/test_model.py
</a>
</li>
<li class="file-stats">
<a href="#5ef06fdb8460916d3ed5c239d428e3c809e6c6aa">
cobra/test/test_solver_model.py
</a>
</li>
<li class="file-stats">
<a href="#e0c94bbc7d3d8ea007a768a9af2632c4c87fe75d">
cobra/test/test_util.py
</a>
</li>
</ul>
<h5>The diff was not included because it is too large.</h5>

</div>
<div class="footer" style="margin-top: 10px;">
<p style="font-size: small; color: #777;">

<br>
<a href="https://salsa.debian.org/med-team/python-cobra/commit/30413e7b4c6ba8f661a0acf0e95840183f4771d9">View it on GitLab</a>.
<br>
You're receiving this email because of your account on salsa.debian.org.
If you'd like to receive fewer emails, you can
adjust your notification settings.
<script type="application/ld+json">{"@context":"http://schema.org","@type":"EmailMessage","action":{"@type":"ViewAction","name":"View Commit","url":"https://salsa.debian.org/med-team/python-cobra/commit/30413e7b4c6ba8f661a0acf0e95840183f4771d9"}}</script>
</p>
</div>
</body>
</html>