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<h3>
Dylan Aïssi pushed to branch master
at <a href="https://salsa.debian.org/med-team/plink">Debian Med / plink</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/plink/commit/70a601b56a9f18af27542f399a8489df4e63de3c">70a601b5</a></strong>
<div>
<span>by Dylan Aïssi</span>
<i>at 2018-09-19T05:30:42Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">cme fix dpkg-control
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/plink/commit/c3648e2b47b37147d303a6c7e45c9144922d2b1d">c3648e2b</a></strong>
<div>
<span>by Dylan Aïssi</span>
<i>at 2018-09-19T05:53:48Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Fix description
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/plink/commit/d727a3da9834128505987e830f3547086929a444">d727a3da</a></strong>
<div>
<span>by Dylan Aïssi</span>
<i>at 2018-09-19T05:53:48Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Bump debhelper 11
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/plink/commit/27b9f5f04f98ccfe3e459e272d0107ab94c09638">27b9f5f0</a></strong>
<div>
<span>by Dylan Aïssi</span>
<i>at 2018-09-19T06:03:49Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Upload to unstable
</pre>
</li>
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<h4>3 changed files:</h4>
<ul>
<li class="file-stats">
<a href="#9c96da0e9f91d7d8937b69b524702c106258f0d1">
debian/changelog
</a>
</li>
<li class="file-stats">
<a href="#78fd675df1cf8c2d4c62ae1a9a912d15c8c50ba4">
debian/compat
</a>
</li>
<li class="file-stats">
<a href="#58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2">
debian/control
</a>
</li>
</ul>
<h4>Changes:</h4>
<li id="9c96da0e9f91d7d8937b69b524702c106258f0d1">
<a href="https://salsa.debian.org/med-team/plink/compare/409d09f87dd0665cf86b667093235172e0e14330...27b9f5f04f98ccfe3e459e272d0107ab94c09638#9c96da0e9f91d7d8937b69b524702c106258f0d1"><strong>debian/changelog</strong></a>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="plaintext">plink (1.07+dfsg-2) unstable; urgency=medium</span>
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<pre style="margin: 0;">+<span id="LC2" class="line" lang="plaintext"></span>
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<td class="diff-line-num new new_line" data-linenumber="3" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC3" class="line" lang="plaintext"> * cme fix dpkg-control</span>
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<td class="diff-line-num new new_line" data-linenumber="4" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC4" class="line" lang="plaintext"> - Bump Standards-Version: 4.2.1.</span>
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<pre style="margin: 0;">+<span id="LC5" class="line" lang="plaintext"> - Update VCS to salsa.</span>
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<pre style="margin: 0;">+<span id="LC6" class="line" lang="plaintext"> * Bump debhelper 11.</span>
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<pre style="margin: 0;">+<span id="LC7" class="line" lang="plaintext"></span>
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<pre style="margin: 0;">+<span id="LC8" class="line" lang="plaintext"> -- Dylan Aïssi <bob.dybian@gmail.com> Wed, 19 Sep 2018 08:03:29 +0200</span>
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<pre style="margin: 0;">+<span id="LC9" class="line" lang="plaintext"></span>
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<pre style="margin: 0;"> <span id="LC10" class="line" lang="plaintext">plink (1.07+dfsg-1) unstable; urgency=medium</span>
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<td class="diff-line-num new_line" data-linenumber="11" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC11" class="line" lang="plaintext"></span>
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<td class="diff-line-num old_line" data-linenumber="3" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<td class="diff-line-num new_line" data-linenumber="12" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<td class="line_content noteable_line" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC12" class="line" lang="plaintext"> * Properly repack source archive</span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="93" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="102" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -93,7 +102,7 @@ plink (1.07-2) unstable; urgency=low</td>
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<td class="diff-line-num old_line" data-linenumber="93" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<td class="diff-line-num new_line" data-linenumber="102" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC102" class="line" lang="plaintext"> * debian/source/format: 3.0 (quilt)</span>
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<td class="diff-line-num old_line" data-linenumber="94" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<td class="diff-line-num new_line" data-linenumber="103" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC103" class="line" lang="plaintext"> * debian/get-orig-source: Better chances to get a unique upstream</span>
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<td class="diff-line-num old_line" data-linenumber="95" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<td class="diff-line-num new_line" data-linenumber="104" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC104" class="line" lang="plaintext"> tarball after repackaging</span>
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<td class="diff-line-num old old_line" data-linenumber="96" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<td class="diff-line-num new_line old" data-linenumber="105" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC96" class="line" lang="plaintext"> * debian/copyright:<span class="idiff left right"> </span></span>
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<td class="diff-line-num new old_line" data-linenumber="97" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="105" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC105" class="line" lang="plaintext"> * debian/copyright:</span>
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<td class="diff-line-num old_line" data-linenumber="97" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
97
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<td class="diff-line-num new_line" data-linenumber="106" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC106" class="line" lang="plaintext"> - Rewritten to match DEP5 and verified using</span>
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<td class="diff-line-num old_line" data-linenumber="98" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
98
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<td class="diff-line-num new_line" data-linenumber="107" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC107" class="line" lang="plaintext"> cme fix dpkg-copyright</span>
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<td class="diff-line-num old_line" data-linenumber="99" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<td class="diff-line-num new_line" data-linenumber="108" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC108" class="line" lang="plaintext"> - Fix FSF address</span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="170" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="179" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -170,4 +179,3 @@ plink (1.03p1-1) unstable; urgency=low</td>
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<pre style="margin: 0;"> <span id="LC179" class="line" lang="plaintext"> * Initial release (Closes: #490832).</span>
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180
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<pre style="margin: 0;"> <span id="LC180" class="line" lang="plaintext"></span>
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<pre style="margin: 0;"> <span id="LC181" class="line" lang="plaintext"> -- Steffen Moeller <moeller@debian.org> Sun, 24 Aug 2008 17:10:55 +0200</span></pre>
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173
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<pre style="margin: 0;">-<span id="LC173" class="line" lang="plaintext"></span></pre>
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<a href="https://salsa.debian.org/med-team/plink/compare/409d09f87dd0665cf86b667093235172e0e14330...27b9f5f04f98ccfe3e459e272d0107ab94c09638#78fd675df1cf8c2d4c62ae1a9a912d15c8c50ba4"><strong>debian/compat</strong></a>
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<pre style="margin: 0;">-<span id="LC1" class="line" lang="plaintext">1<span class="idiff left right">0</span></span></pre>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="plaintext">1<span class="idiff left right">1</span></span></pre>
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<a href="https://salsa.debian.org/med-team/plink/compare/409d09f87dd0665cf86b667093235172e0e14330...27b9f5f04f98ccfe3e459e272d0107ab94c09638#58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2"><strong>debian/control</strong></a>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -6,11 +6,11 @@ Uploaders: Steffen Moeller <moeller@debian.org>,</td>
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<pre style="margin: 0;"> <span id="LC6" class="line" lang="plaintext"> Dylan Aïssi <bob.dybian@gmail.com></span>
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<pre style="margin: 0;"> <span id="LC7" class="line" lang="plaintext">Section: science</span>
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<pre style="margin: 0;"> <span id="LC8" class="line" lang="plaintext">Priority: optional</span>
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<pre style="margin: 0;">-<span id="LC9" class="line" lang="plaintext">Build-Depends: debhelper (>= 1<span class="idiff left right">0</span>),</span>
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<pre style="margin: 0;">+<span id="LC9" class="line" lang="plaintext">Build-Depends: debhelper (>= 1<span class="idiff left right">1</span>),</span>
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<pre style="margin: 0;"> <span id="LC10" class="line" lang="plaintext"> zlib1g-dev</span>
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11
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<pre style="margin: 0;">-<span id="LC11" class="line" lang="plaintext">Standards-Version: 4.<span class="idiff left right">1.2</span></span>
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12
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<pre style="margin: 0;">-<span id="LC12" class="line" lang="plaintext">Vcs-Browser: https://<span class="idiff left right">anonscm.debian.org/cgit/debian-med/plink.git</span></span>
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<pre style="margin: 0;">-<span id="LC13" class="line" lang="plaintext">Vcs-Git: https://<span class="idiff left right">anonscm.debian.org/git/debian-med</span>/plink.git</span>
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<pre style="margin: 0;">+<span id="LC11" class="line" lang="plaintext">Standards-Version: 4.<span class="idiff left right">2.1</span></span>
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<pre style="margin: 0;">+<span id="LC12" class="line" lang="plaintext">Vcs-Browser: https://<span class="idiff left right">salsa.debian.org/med-team/plink</span></span>
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<pre style="margin: 0;">+<span id="LC13" class="line" lang="plaintext">Vcs-Git: https://<span class="idiff left right">salsa.debian.org/med-team</span>/plink.git</span>
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<pre style="margin: 0;"> <span id="LC14" class="line" lang="plaintext">Homepage: http://zzz.bwh.harvard.edu/plink/</span>
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<pre style="margin: 0;"> <span id="LC15" class="line" lang="plaintext"></span>
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<pre style="margin: 0;"> <span id="LC16" class="line" lang="plaintext">Package: plink</span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -19,11 +19,11 @@ Depends: ${shlibs:Depends},</td>
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<pre style="margin: 0;"> <span id="LC19" class="line" lang="plaintext"> ${misc:Depends}</span>
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<pre style="margin: 0;"> <span id="LC20" class="line" lang="plaintext">Recommends: med-config (>= 2.1)</span>
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<pre style="margin: 0;"> <span id="LC21" class="line" lang="plaintext">Description: whole-genome association analysis toolset</span>
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<pre style="margin: 0;">-<span id="LC22" class="line" lang="plaintext"> plink expects as input the data from SNP (single<span class="idiff left right"> </span></span>
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<pre style="margin: 0;">+<span id="LC22" class="line" lang="plaintext"> plink expects as input the data from SNP (single</span>
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<pre style="margin: 0;"> <span id="LC23" class="line" lang="plaintext"> nucleotide polymorphism) chips of many individuals</span>
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<pre style="margin: 0;"> <span id="LC24" class="line" lang="plaintext"> and their phenotypical description of a disease.</span>
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<pre style="margin: 0;"> <span id="LC25" class="line" lang="plaintext"> It finds associations of single or pairs of DNA</span>
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<pre style="margin: 0;">-<span id="LC26" class="line" lang="plaintext"> variations with a phenotype and can retrieve<span class="idiff left right"> </span></span>
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<pre style="margin: 0;">+<span id="LC26" class="line" lang="plaintext"> variations with a phenotype and can retrieve</span>
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<pre style="margin: 0;"> <span id="LC27" class="line" lang="plaintext"> SNP annotation from an online source.</span>
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<pre style="margin: 0;"> <span id="LC28" class="line" lang="plaintext"> .</span>
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<pre style="margin: 0;"> <span id="LC29" class="line" lang="plaintext"> SNPs can evaluated individually or as pairs for their</span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -33,4 +33,4 @@ Description: whole-genome association analysis toolset</td>
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<pre style="margin: 0;"> <span id="LC33" class="line" lang="plaintext"> .</span>
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<pre style="margin: 0;"> <span id="LC34" class="line" lang="plaintext"> Please note: The executable was renamed to plink1</span>
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<pre style="margin: 0;"> <span id="LC35" class="line" lang="plaintext"> because of a name clash. Please read more about this</span>
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<pre style="margin: 0;">-<span id="LC36" class="line" lang="plaintext"> in /usr/share/doc/README.Debian.</span></pre>
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<pre style="margin: 0;">+<span id="LC36" class="line" lang="plaintext"> in /usr/share/doc/<span class="idiff left right">plink/</span>README.Debian.</span></pre>
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