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<h3>
Andreas Tille pushed to branch master
at <a href="https://salsa.debian.org/med-team/sambamba">Debian Med / sambamba</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/sambamba/commit/ae969fe0d253523547a6525a2f27cf61e621735f">ae969fe0</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2018-09-23T05:42:25Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Allow pre-releases in watch file
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/sambamba/commit/e731085a7c9bb45f70637b38597266d0f1e14d81">e731085a</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2018-09-23T05:42:56Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">New upstream version 0.6.8-pre3</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/sambamba/commit/b81107951a7f8845ef3dcbf613bf6b7edde6281f">b8110795</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2018-09-23T05:42:57Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Update upstream source from tag 'upstream/0.6.8-pre3'
Update to upstream version '0.6.8-pre3'
with Debian dir 8e9a8c8337ab0040111f3b3375b66f486628c07f</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/sambamba/commit/87e88827f29b7ab0b93dcaaa4d99cddf3962ef4d">87e88827</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2018-09-23T05:42:58Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">New upstream version
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/sambamba/commit/681fcee20a8765928efa3757b031753e9a3ff6b4">681fcee2</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2018-09-23T05:48:00Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Patch incorporated in upstream pre-release
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/sambamba/commit/51289f2e3d0361cb86a473123b5ba61ab597f0ca">51289f2e</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2018-09-23T05:49:18Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Typo
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/sambamba/commit/e2e5659edfdd7c08a70f0699f3196a8022c93e48">e2e5659e</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2018-09-23T06:07:35Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Add new source files to meson patch
</pre>
</li>
</ul>
<h4>30 changed files:</h4>
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<li class="file-stats">
<a href="#a5cc2925ca8258af241be7e5b0381edf30266302">
.gitignore
</a>
</li>
<li class="file-stats">
<a href="#7445606fbf8f3683cd42bdc54b05d7a0bc2dfc44">
.gitmodules
</a>
</li>
<li class="file-stats">
<a href="#dea01dd89a3b602828e630677fde5d77c06441c8">
<span class="new-file">
+
.travis.yml
</span>
</a>
</li>
<li class="file-stats">
<a href="#b2270542d41297db1ee0d12698e609ea3ec25ce7">
<span class="new-file">
+
INSTALL.md
</span>
</a>
</li>
<li class="file-stats">
<a href="#836efb6e25a091dcb4ff8e1dbb2f0be6a5cbf14c">
Makefile
</a>
</li>
<li class="file-stats">
<a href="#544fe3dec8c6dbfa9ec37b21822a8554798b2423">
Makefile.guix
</a>
</li>
<li class="file-stats">
<a href="#91cc2532f591671fe7cb5aec7b8e6c99fe96d6ec">
<span class="new-file">
+
Makefile.old
</span>
</a>
</li>
<li class="file-stats">
<a href="#8ec9a00bfd09b3190ac6b22251dbb1aa95a0579d">
README.md
</a>
</li>
<li class="file-stats">
<a href="#6f8a88f369eae9b2f3ece90d1ba6366a16f25f9c">
<span class="new-file">
+
RELEASE-NOTES.md
</span>
</a>
</li>
<li class="file-stats">
<a href="#1c234ee6338e481dea3657d54dfa39f5e45ffa84">
cram/wrappers.d
</a>
</li>
<li class="file-stats">
<a href="#9c96da0e9f91d7d8937b69b524702c106258f0d1">
debian/changelog
</a>
</li>
<li class="file-stats">
<a href="#d4ca063435231e17f798b8ed105fe0ff639a1ece">
debian/patches/01_add_meson.patch
</a>
</li>
<li class="file-stats">
<a href="#fa173e15fd1f95248232e127ee0aae328667c203">
<span class="deleted-file">
−
debian/patches/03_fix_normalize.patch
</span>
</a>
</li>
<li class="file-stats">
<a href="#bc34014ab4b9a49dd7a27bdd8d352912607c3a96">
debian/patches/series
</a>
</li>
<li class="file-stats">
<a href="#8756c63497c8dc39f7773438edf53b220c773f67">
debian/rules
</a>
</li>
<li class="file-stats">
<a href="#68ef9f98c01c7eecd4c605cc26048a06f3304b79">
debian/watch
</a>
</li>
<li class="file-stats">
<a href="#7d096d615e9a5f94978a9f4dadcffa52fa06eb23">
<span class="new-file">
+
doc/design.org
</span>
</a>
</li>
<li class="file-stats">
<a href="#c8182d3068e7c60f52f0823e8be0b2d7aa02a5f0">
<span class="new-file">
+
dub.json
</span>
</a>
</li>
<li class="file-stats">
<a href="#da8c3529949805abe1b73685532823c3fb63b1a9">
run_tests.sh
</a>
</li>
<li class="file-stats">
<a href="#3b3ae0b610f6ae26ed107e183c7ee027e957b1ed">
main.d
→
sambamba/main.d
</a>
</li>
<li class="file-stats">
<a href="#b888d326ed4b8a8c518a69a5de5f0ae9bc642ef9">
sambamba/markdup.d
</a>
</li>
<li class="file-stats">
<a href="#9f2da6fdabbd5ca32a18c559c9b1bd8869ec535f">
<span class="new-file">
+
sambamba/markdup2.d
</span>
</a>
</li>
<li class="file-stats">
<a href="#f3e9a93cbfbe9312862beaf4bf5f3a05ac9f2466">
sambamba/merge.d
</a>
</li>
<li class="file-stats">
<a href="#b5a32146659405cf1e2a8a45e9e3b9043c26a363">
sambamba/pileup.d
</a>
</li>
<li class="file-stats">
<a href="#fafe746cd796043618d875c517f24ff0bd39c344">
sambamba/sort.d
</a>
</li>
<li class="file-stats">
<a href="#7d9a0fa7558e07dc4b483ee3efc20abdb8441dda">
<span class="new-file">
+
sambamba/subsample.d
</span>
</a>
</li>
<li class="file-stats">
<a href="#e13f42ebca40b7f4d7c463ab536c184218a205b9">
<span class="new-file">
+
sambamba/validate.d
</span>
</a>
</li>
<li class="file-stats">
<a href="#42bb90bd9eaf6d026143c6ccaef8a641b5f28589">
sambamba/view.d
</a>
</li>
<li class="file-stats">
<a href="#5f16e8f922a2787e0eb4e007a3b52f77da637bb0">
bioconda_push.sh
→
scripts/bioconda_push.sh
</a>
</li>
<li class="file-stats">
<a href="#7d35239ef868d33f5aeefd34262dd0254fb401bd">
bioconda_yaml_gen.py
→
scripts/bioconda_yaml_gen.py
</a>
</li>
</ul>
<h5>The diff was not included because it is too large.</h5>
</div>
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