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<h3>
Andreas Tille pushed to branch master
at <a href="https://salsa.debian.org/med-team/abyss">Debian Med / abyss</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/abyss/commit/bd7747be2d9f51a600d548e18498731326440b44">bd7747be</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2018-09-26T11:14:40Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">New upstream version 2.1.1</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/abyss/commit/6f73bf598bc301c1fe4fc46b966e09fd004833cd">6f73bf59</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2018-09-26T11:14:44Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Update upstream source from tag 'upstream/2.1.1'
Update to upstream version '2.1.1'
with Debian dir 5168c125b02e1dd13bfb89ef808a0a7491a3827e</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/abyss/commit/78741e621b59651ce8badccbe411a67355bbf070">78741e62</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2018-09-26T11:14:44Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">New upstream version
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/abyss/commit/0d61b17aa951bc249eec000ff6372197cea9de50">0d61b17a</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2018-09-26T11:14:48Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Standards-Version: 4.2.1
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/abyss/commit/f2d36ffe089980a821622e76ebd95f5a34b9f74d">f2d36ffe</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2018-09-26T11:16:03Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Adapt quilt patch
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/abyss/commit/8b745aba0bc8f2bc51aeab87935e0a5c8e1876df">8b745aba</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2018-09-26T11:30:12Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Fix Perl interpreter path
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/abyss/commit/f38d9973a158a7c68e39627fec91c903273e018d">f38d9973</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2018-09-26T11:43:03Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Upload to unstable
</pre>
</li>
</ul>
<h4>30 changed files:</h4>
<ul>
<li class="file-stats">
<a href="#fd5da61396a8376845bee5cdf71aaf3c98a888ae">
.circleci/config.yml
</a>
</li>
<li class="file-stats">
<a href="#2cf278dc74fa8a48f18bb48f627569f525c75c83">
<span class="new-file">
+
.github/ISSUE_TEMPLATE.rb
</span>
</a>
</li>
<li class="file-stats">
<a href="#0f38138c962d98e7a58c86f6c3a9d8ec2405a8c5">
ABYSS/abyss.cc
</a>
</li>
<li class="file-stats">
<a href="#ab4acc45f1a2b9fbb0fa9f7ea242a398c1b3414e">
Assembly/BranchGroup.h
</a>
</li>
<li class="file-stats">
<a href="#106373013b0f3a760e994905f1e2258658616088">
Assembly/BranchRecordBase.h
</a>
</li>
<li class="file-stats">
<a href="#93f7e681d166df70385668638a0f5cd785aca3e2">
Assembly/CoverageAlgorithm.h
</a>
</li>
<li class="file-stats">
<a href="#e133e74b95b6471ada2d9c93780514f13b5bcdaa">
Assembly/Options.cc
</a>
</li>
<li class="file-stats">
<a href="#2c6fc47d7571c8b92eb7b16a3ec90b8250d53504">
Assembly/Options.h
</a>
</li>
<li class="file-stats">
<a href="#5e60dcb05a0ee51258b476dc569874fa403ddb13">
Bloom/BloomFilter.h
</a>
</li>
<li class="file-stats">
<a href="#b85d7fc428f55cd7c27e1a9d5e0f3121ad671342">
Bloom/BloomFilterWindow.h
</a>
</li>
<li class="file-stats">
<a href="#c46ebc04036b4edd1456804c851fc51ba46bd09f">
Bloom/CascadingBloomFilter.h
</a>
</li>
<li class="file-stats">
<a href="#85f238805565ab86260a2a905eb5d3b31eb4b39a">
Bloom/bloom.cc
</a>
</li>
<li class="file-stats">
<a href="#b9a346b1d81a4f8a5415d5f98b1bb6c82fc90742">
BloomDBG/HashAgnosticCascadingBloom.h
</a>
</li>
<li class="file-stats">
<a href="#4a427d65196898e56f3adfd4c1ac2e209fd86a58">
BloomDBG/LightweightKmer.h
</a>
</li>
<li class="file-stats">
<a href="#3115fadeb62664b72661119974cb367517b96487">
BloomDBG/Makefile.am
</a>
</li>
<li class="file-stats">
<a href="#528657d4dd563b35bde5ddc9e8f09e3debf81be5">
BloomDBG/RollingBloomDBG.h
</a>
</li>
<li class="file-stats">
<a href="#cfe499e920e3eba1a8545b3c771d3164a8d1034a">
BloomDBG/RollingHash.h
</a>
</li>
<li class="file-stats">
<a href="#a56cf4a4d7916a36bb673587cdcc147c0f71ec4e">
BloomDBG/bloom-dbg.cc
</a>
</li>
<li class="file-stats">
<a href="#0b62049cb0aeb3c9bee68967647586dd3107f2ea">
BloomDBG/bloom-dbg.h
</a>
</li>
<li class="file-stats">
<a href="#00fe7828d56d7a3ee4030d6cea057cf13f50e70c">
ChangeLog
</a>
</li>
<li class="file-stats">
<a href="#506b46346e008204c9cf67119dd416e2f6ea4687">
Common/Estimate.h
</a>
</li>
<li class="file-stats">
<a href="#d7d703dd7482735bb7c35ad1e3db7dd87d6441c5">
<span class="new-file">
+
Common/Exception.h
</span>
</a>
</li>
<li class="file-stats">
<a href="#e7569b923fbde824f301b50a4974c48d020ece83">
Common/Histogram.h
</a>
</li>
<li class="file-stats">
<a href="#203fb7e6fe3b339a0f09b7fb12ba6dca6171901f">
Common/Makefile.am
</a>
</li>
<li class="file-stats">
<a href="#b3d1e40f83d75fc99ca888d0848ed4db34203ead">
Common/PMF.h
</a>
</li>
<li class="file-stats">
<a href="#ca4eddc60f5842e58e0e33424515ff399c6acb6c">
Common/SAM.h
</a>
</li>
<li class="file-stats">
<a href="#7df49766e3218d4758faee593187275910cbf530">
DataLayer/FastaReader.h
</a>
</li>
<li class="file-stats">
<a href="#9e095fe05f68b0f273f086929c4c52e28673569a">
DataLayer/fac.cc
</a>
</li>
<li class="file-stats">
<a href="#3e981be8eb7090e9a4f1e4aae9025dfe05e6cf4f">
DistanceEst/DistanceEst.cpp
</a>
</li>
<li class="file-stats">
<a href="#f3dd969c5cccdbd172d860aff38948deaf2f83cd">
Graph/GfaIO.h
</a>
</li>
</ul>
<h5>The diff was not included because it is too large.</h5>
</div>
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