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GitLab
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<h3>
Andreas Tille pushed to branch master
at <a href="https://salsa.debian.org/med-team/tnseq-transit">Debian Med / tnseq-transit</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/tnseq-transit/commit/d1480d4097d72562b2c52e27aa0b0227ea44db9c">d1480d40</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2018-09-26T19:00:57Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">New upstream version 2.2.1</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/tnseq-transit/commit/7b3dab3fd30eb1dbc83dad14eb045835f04f541e">7b3dab3f</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2018-09-26T19:02:49Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Update upstream source from tag 'upstream/2.2.1'

Update to upstream version '2.2.1'
with Debian dir dbe8eb22a674e3d33e5295655fc0aa3af5c16e47</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/tnseq-transit/commit/ae71baaf6b47829e2f44674ba077a09fe1236a09">ae71baaf</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2018-09-26T19:02:49Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">New upstream version
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/tnseq-transit/commit/3039caa2973e04bff398e85191de6a751b8a3e65">3039caa2</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2018-09-26T19:02:59Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Standards-Version: 4.2.1
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/tnseq-transit/commit/fe65c2bf5e379be906f39bfe82a93b7d690065e9">fe65c2bf</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2018-09-26T19:04:10Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Upload to unstable
</pre>
</li>
</ul>
<h4>30 changed files:</h4>
<ul>
<li class="file-stats">
<a href="#8ec9a00bfd09b3190ac6b22251dbb1aa95a0579d">
README.md
</a>
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<li class="file-stats">
<a href="#b33892fbddeffc3368077b4904ad0b3d562a7312">
VERSION
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<li class="file-stats">
<a href="#9c96da0e9f91d7d8937b69b524702c106258f0d1">
debian/changelog
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<li class="file-stats">
<a href="#58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2">
debian/control
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<li class="file-stats">
<a href="#8e2edce0d507e1297474f25c00cae94258db38d8">
setup.py
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<li class="file-stats">
<a href="#95fc4dffde2689028ad133233a529fa3619cb18b">
src/pytpp/__main__.py
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<li class="file-stats">
<a href="#176b28a2342a4b0b837f1b361ba78e8f0ea87ce4">
src/pytransit/__init__.py
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<li class="file-stats">
<a href="#ceace322bc3b80ee493350527cac7669ad632158">
src/pytransit/__main__.py
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<li class="file-stats">
<a href="#0ffc91104acbadc1fba73c8b5711f169b29874db">
src/pytransit/analysis/__init__.py
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<li class="file-stats">
<a href="#a067391127fae50dcf63c3968bd732956357ed52">
src/pytransit/analysis/base.py
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<li class="file-stats">
<a href="#400cad1d6b21ef9fcf888e37a2aa70c043318a46">
src/pytransit/analysis/binomial.py
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<li class="file-stats">
<a href="#0aeecfb7fdbdcfb2787895187f891a1385737b30">
src/pytransit/analysis/example.py
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<a href="#8f7b871a787b5d5c5b3a11bed95337c59a510906">
<span class="new-file">
+
src/pytransit/analysis/gi.py
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<li class="file-stats">
<a href="#032b7a4bd61d7789a255228903f9e1d31eaf880f">
src/pytransit/analysis/griffin.py
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<li class="file-stats">
<a href="#a522d0d990a6ccfbb24eba81a727b32c79e5f81a">
src/pytransit/analysis/gumbel.py
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<li class="file-stats">
<a href="#00356195138da970d79b40310349b42befe9abe3">
src/pytransit/analysis/hmm.py
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<li class="file-stats">
<a href="#6bc80ed7310527c49431468259ab0f095592236a">
src/pytransit/analysis/norm.py
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<li class="file-stats">
<a href="#c8957f2356d9e8d37d053848a519d268c0da4500">
src/pytransit/analysis/rankproduct.py
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<li class="file-stats">
<a href="#46073ef784cdc338b0714d64bb6fd29c8fbdaf90">
src/pytransit/analysis/resampling.py
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<li class="file-stats">
<a href="#bc8898d1d2d3504ac8c72cd9edc38508899cca04">
src/pytransit/analysis/tn5gaps.py
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</li>
<li class="file-stats">
<a href="#7296872bff29c67bcf0f86ab4bc0ce8bb7e016be">
<span class="new-file">
+
src/pytransit/analysis/utest.py
</span>
</a>
</li>
<li class="file-stats">
<a href="#6fdd16a81c3922286231bd354d6ea8e7c2f045c4">
<span class="deleted-file">

src/pytransit/data/gumbel_glycerol_reads_rep1_s10000_b500_t1.dat
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<li class="file-stats">
<a href="#3f7e62b2776abaaf1d2eddb143eda2e8dd84e657">
<span class="deleted-file">

src/pytransit/data/hmm_glycerol_sites.dat
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<li class="file-stats">
<a href="#d0dd90c2d4dfc73016a3a380f7925e30c5481901">
<span class="deleted-file">

src/pytransit/data/hmm_glycerol_sites_genes.dat
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<li class="file-stats">
<a href="#7504853962a4aedf1bf8fa077ae4492a1732bc61">
<span class="deleted-file">

src/pytransit/data/resampling_results_glyc_chol.dat
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<li class="file-stats">
<a href="#d505c53bdc35b1ad6af6cfc9d03ab450a6c5a8c3">
<span class="deleted-file">

src/pytransit/doc/Makefile
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<li class="file-stats">
<a href="#4d5e9e60a0e7422d885dffddfe16df3bdde91369">
<span class="deleted-file">

src/pytransit/doc/images/tutorial_glyc_ctrl.png
</span>
</a>
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<li class="file-stats">
<a href="#541a8e0419bd4de50d22c1e2562c111338bb649b">
<span class="deleted-file">

src/pytransit/doc/make.bat
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<li class="file-stats">
<a href="#491d7ea6c70fbb93f11b2ed048dd039733969886">
<span class="deleted-file">

src/pytransit/doc/source/Makefile
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<li class="file-stats">
<a href="#a19c0c6d5af5f44531d22a00905364dce04df9de">
src/pytransit/doc/images/export_menu.png

src/pytransit/doc/source/_images/export_menu.png
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</li>
</ul>
<h5>The diff was not included because it is too large.</h5>

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<a href="https://salsa.debian.org/med-team/tnseq-transit/compare/deccdaafbc5024be385964a24b1e7cb55291c4f5...fe65c2bf5e379be906f39bfe82a93b7d690065e9">View it on GitLab</a>.
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