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<h3>
Dylan Aïssi pushed to branch upstream
at <a href="https://salsa.debian.org/med-team/beagle">Debian Med / beagle</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/beagle/commit/984ed8b0d47996dc93fbd1b87edf4ff835cfc37b">984ed8b0</a></strong>
<div>
<span>by Dylan Aïssi</span>
<i>at 2018-10-02T21:40:21Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">New upstream version 5.0-180928+dfsg</pre>
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<h4>30 changed files:</h4>
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blbutil/ByteArray.java
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blbutil/Utilities.java
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<a href="#b2ba9080612250531e5601745e2e52ed48f1770e">
bref/AsIsBref3Writer.java
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<a href="#75b4875e136736cf8fa3756993e43d51ba5a980f">
bref/Bref3It.java
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<a href="#923ab2081306a60ce903c2304d7d5d6f3224175c">
bref/Bref3Reader.java
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bref/BrefWriter.java
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bref/SeqCoder3.java
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bref/UnBref3.java
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haplotype/BitHapPair.java
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haplotype/HapPairPhasedGT.java
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haplotype/HapPairs.java
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haplotype/WrappedHapPair.java
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haplotype/WrappedHapPairs.java
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imp/HapToSeq.java
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imp/HaplotypeCoder.java
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imp/ImpData.java
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imp/ImpIbs.java
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<a href="#315086b42467cd64d67b45236c874d197c068244">
imp/ImpStates.java
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imp/ImputedVcfWriter.java
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imp/RefHapHash.java
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imp/StateProbsFactory.java
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blbutil/CharArray.java
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ints/CharArray.java
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ints/IndexArray.java
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blbutil/IntArray.java
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ints/IntArray.java
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blbutil/IntList.java
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ints/IntList.java
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blbutil/IntMap.java
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ints/IntMap.java
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blbutil/IntSet.java
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ints/IntSet.java
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ints/LongArray.java
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ints/PackedIntArray.java
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blbutil/UnsignedByteArray.java
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ints/UnsignedByteArray.java
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<h5>The diff was not included because it is too large.</h5>
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