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<h3>
Andreas Tille pushed to branch upstream
at <a href="https://salsa.debian.org/med-team/segemehl">Debian Med / segemehl</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/segemehl/commit/970ccb1afc1530c0f82a6016e9b527617cd283e0">970ccb1a</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2018-10-04T19:28:59Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">New upstream version 0.3</pre>
</li>
</ul>
<h4>30 changed files:</h4>
<ul>
<li class="file-stats">
<a href="#836efb6e25a091dcb4ff8e1dbb2f0be6a5cbf14c">
<span class="new-file">
+
Makefile
</span>
</a>
</li>
<li class="file-stats">
<a href="#73a7ba9107dd4cfcfe0535d89abcea2e22dccac2">
<span class="new-file">
+
Makefile.bak
</span>
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</li>
<li class="file-stats">
<a href="#51037bfaa7eb13b89e7a03254faca4502eb51e14">
segemehl/libs/alignment.h
→
include/alignment.h
</a>
</li>
<li class="file-stats">
<a href="#880c5867ae2f9343802d5934ef9800754a73b8b8">
segemehl/libs/aluruSort.h
→
include/aluruSort.h
</a>
</li>
<li class="file-stats">
<a href="#390a5a94192673c0e5c720ccb111c6e877ea21ba">
<span class="new-file">
+
include/annotation.h
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</li>
<li class="file-stats">
<a href="#80970bd1ab1586db7017e55fc7f135e6ff5e87f3">
<span class="new-file">
+
include/bamio.h
</span>
</a>
</li>
<li class="file-stats">
<a href="#2c2a63e5fbd6ae94e717389936fe8f874b71ffb9">
segemehl/libs/basic-types.h
→
include/basic-types.h
</a>
</li>
<li class="file-stats">
<a href="#0f75e3f4c6629ca43534f753f8ffc0290401ba93">
<span class="new-file">
+
include/bedfiles.h
</span>
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</li>
<li class="file-stats">
<a href="#1ddffdbba233f416e7738db00d116ffeb452b63c">
<span class="new-file">
+
include/bgzip.h
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<li class="file-stats">
<a href="#82df5c2e8b04f812eb87c2adc7dd2baaac4e6183">
segemehl/libs/biofiles.h
→
include/biofiles.h
</a>
</li>
<li class="file-stats">
<a href="#546f427640db6132dbe885b2e1dcd36331ba4ce4">
segemehl/libs/bitArray.h
→
include/bitArray.h
</a>
</li>
<li class="file-stats">
<a href="#549cf3a4fd2fb322434359d985d042ffdfc7b8dc">
segemehl/libs/bitVector.h
→
include/bitVector.h
</a>
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<li class="file-stats">
<a href="#aba08d64cd6dc870ed99cc6f1aa7fe30662d21e5">
segemehl/libs/bitvectoralg.h
→
include/bitvectoralg.h
</a>
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<li class="file-stats">
<a href="#b106ae5865f2ce8349325f2fd611747b4d1c29d8">
<span class="new-file">
+
include/brendel.h
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</a>
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<li class="file-stats">
<a href="#94de46a003b9909dbe8f1aee24b9453e78484187">
segemehl/libs/sufarray/charsequence.h
→
include/charsequence.h
</a>
</li>
<li class="file-stats">
<a href="#1c32cace1fb7a39291447543f357478a38be1c13">
segemehl/libs/citation.h
→
include/citation.h
</a>
</li>
<li class="file-stats">
<a href="#dc30d2654641ab7a2409af3d9cc82acb01a33943">
segemehl/libs/container.h
→
include/container.h
</a>
</li>
<li class="file-stats">
<a href="#6f95e454931ae1063157aa243ebe42364b145e0a">
segemehl/libs/debug.h
→
include/debug.h
</a>
</li>
<li class="file-stats">
<a href="#7bf96cd5ac5a8c528af288d104d780e7178c0516">
segemehl/libs/sufarray/falphabet.h
→
include/falphabet.h
</a>
</li>
<li class="file-stats">
<a href="#f57291256f897505687efa9a99cfeb7d71cb38cf">
segemehl/libs/fileBins.h
→
include/fileBins.h
</a>
</li>
<li class="file-stats">
<a href="#43d0b376078ac6ce1f8ee5c60cd6b9d945788407">
<span class="new-file">
+
include/filebuffer.h
</span>
</a>
</li>
<li class="file-stats">
<a href="#7742f5cee5bf1f8ccde284a0b22e8272e3bfd7b3">
segemehl/libs/fileio.h
→
include/fileio.h
</a>
</li>
<li class="file-stats">
<a href="#5cc0f88b185df58f05815d20b7c00e0a24b992b7">
<span class="new-file">
+
include/gzidx.h
</span>
</a>
</li>
<li class="file-stats">
<a href="#2fe8fc835ffa93d15821ee745a2306a87ecc8fbc">
<span class="new-file">
+
include/gzip.h
</span>
</a>
</li>
<li class="file-stats">
<a href="#95c2d67ff9d77f8583c6ae47e0a9e6a03943aa19">
<span class="new-file">
+
include/haarz.h
</span>
</a>
</li>
<li class="file-stats">
<a href="#d1deccaeee449247db3eaab91f4367198b3ac552">
segemehl/libs/info.h
→
include/info.h
</a>
</li>
<li class="file-stats">
<a href="#eec0c279f6f1bcd3d94794e4566d093b5b38968f">
<span class="new-file">
+
include/intervaltree.h
</span>
</a>
</li>
<li class="file-stats">
<a href="#6d1f35c98a134bcc44df533b74aaca6668cdd948">
segemehl/libs/iupac.h
→
include/iupac.h
</a>
</li>
<li class="file-stats">
<a href="#38e1fda630fecccb0648a46f9d5b510dfc6765d1">
<span class="new-file">
+
include/junctions.h
</span>
</a>
</li>
<li class="file-stats">
<a href="#18d3c5e2ecd35a6f9a45d015cf765a1d9ab8f6c2">
segemehl/libs/karlin.h
→
include/karlin.h
</a>
</li>
</ul>
<h5>The diff was not included because it is too large.</h5>
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